Cow genome map
| Conread name: | LyN1-MLN01D110012 |
| Conread position: | 16-260 |
| Cow position: | chr15:26614562-26614312 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 184 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 199, 0 |
| Conread position: | 18-507 |
| Cow position: | chr15:9345865-9345371 (view UCSC Genome Browser custom track) |
| Alignm length: | 504 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 202, 89 |
| Conread position: | 24-517 |
| Cow position: | chr15:32450787-32451294 (view UCSC Genome Browser custom track) |
| Alignm length: | 519 |
| Alignm identity: | 340 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 191, 95 |
| Conread position: | 27-219 |
| Cow position: | chr15:18249175-18248983 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 147 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 29-191 |
| Cow position: | chr15:12773787-12773626 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 128 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 151, 0 |
| Conread position: | 30-511 |
| Cow position: | chr15:5086837-5086345 (view UCSC Genome Browser custom track) |
| Alignm length: | 507 |
| Alignm identity: | 355 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 299, 191 |
| Conread position: | 30-512 |
| Cow position: | chr15:42654477-42654976 (view UCSC Genome Browser custom track) |
| Alignm length: | 504 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 183, 267 |
| Conread position: | 31-219 |
| Cow position: | chr15:14189095-14188911 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 143 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 149, 0 |
| Conread position: | 31-337 |
| Cow position: | chr15:37048822-37049109 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 210 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 245, 23 |
| Conread position: | 31-446 |
| Cow position: | chr15:22871875-22872303 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 193, 143 |
| Conread position: | 31-511 |
| Cow position: | chr15:15372771-15373263 (view UCSC Genome Browser custom track) |
| Alignm length: | 499 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 302 |
| Conread position: | 31-512 |
| Cow position: | chr15:45870010-45870502 (view UCSC Genome Browser custom track) |
| Alignm length: | 498 |
| Alignm identity: | 337 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 184, 301 |
| Conread position: | 32-193 |
| Cow position: | chr15:22578852-22578693 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 130 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 134, 0 |
| Conread position: | 32-510 |
| Cow position: | chr15:767347-766846 (view UCSC Genome Browser custom track) |
| Alignm length: | 508 |
| Alignm identity: | 343 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 276 |
| Conread position: | 32-511 |
| Cow position: | chr15:10408283-10407797 (view UCSC Genome Browser custom track) |
| Alignm length: | 494 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 122 |
| Conread position: | 33-272 |
| Cow position: | chr15:17220352-17220596 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 182 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 39, 28 |
| Conread position: | 33-511 |
| Cow position: | chr15:40814185-40813724 (view UCSC Genome Browser custom track) |
| Alignm length: | 486 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 332, 188 |
| Conread position: | 34-326 |
| Cow position: | chr15:45997042-45996742 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 226 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 20 |
| Conread position: | 34-334 |
| Cow position: | chr15:6290276-6289989 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 224 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 193 |
| Conread position: | 34-512 |
| Cow position: | chr15:28063325-28062837 (view UCSC Genome Browser custom track) |
| Alignm length: | 498 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 86 |
| Conread position: | 35-182 |
| Cow position: | chr15:25169836-25169691 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 116 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 35-254 |
| Cow position: | chr15:44645177-44644959 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 168 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 185, 23 |
| Conread position: | 35-509 |
| Cow position: | chr15:22979382-22978904 (view UCSC Genome Browser custom track) |
| Alignm length: | 491 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 185, 130 |
| Conread position: | 35-517 |
| Cow position: | chr15:234918-235408 (view UCSC Genome Browser custom track) |
| Alignm length: | 502 |
| Alignm identity: | 342 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 178, 88 |
| Conread position: | 35-525 |
| Cow position: | chr15:20133872-20134368 (view UCSC Genome Browser custom track) |
| Alignm length: | 503 |
| Alignm identity: | 345 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 174, 253 |
| Conread position: | 36-179 |
| Cow position: | chr15:32442988-32443130 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 114 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 36-334 |
| Cow position: | chr15:1854615-1854322 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 205 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 85, 30 |
| Conread position: | 36-510 |
| Cow position: | chr15:44592055-44592542 (view UCSC Genome Browser custom track) |
| Alignm length: | 496 |
| Alignm identity: | 333 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 129 |
| Conread position: | 36-510 |
| Cow position: | chr15:51316745-51316260 (view UCSC Genome Browser custom track) |
| Alignm length: | 493 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 179, 255 |
| Conread position: | 36-529 |
| Cow position: | chr15:34201329-34200826 (view UCSC Genome Browser custom track) |
| Alignm length: | 513 |
| Alignm identity: | 342 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 183, 28 |
| Conread position: | 37-159 |
| Cow position: | chr15:38616940-38617062 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 97 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 37-214 |
| Cow position: | chr15:12826303-12826481 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 136 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 104, 0 |
| Conread position: | 37-260 |
| Cow position: | chr15:18626594-18626365 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 181 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 178, 0 |
| Conread position: | 37-266 |
| Cow position: | chr15:20344058-20344292 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 177 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 74, 109 |
| Conread position: | 37-396 |
| Cow position: | chr15:27276140-27275776 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 254 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 180, 32 |
| Conread position: | 37-498 |
| Cow position: | chr15:29310901-29311369 (view UCSC Genome Browser custom track) |
| Alignm length: | 476 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 178, 168 |
| Conread position: | 37-509 |
| Cow position: | chr15:316127-316609 (view UCSC Genome Browser custom track) |
| Alignm length: | 490 |
| Alignm identity: | 330 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 183, 288 |
| Conread position: | 37-509 |
| Cow position: | chr15:15887272-15887752 (view UCSC Genome Browser custom track) |
| Alignm length: | 491 |
| Alignm identity: | 325 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 136, 96 |
| Conread position: | 37-509 |
| Cow position: | chr15:17293479-17293005 (view UCSC Genome Browser custom track) |
| Alignm length: | 482 |
| Alignm identity: | 329 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 238, 173 |
| Conread position: | 37-509 |
| Cow position: | chr15:28617522-28617036 (view UCSC Genome Browser custom track) |
| Alignm length: | 494 |
| Alignm identity: | 322 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 177, 98 |
| Conread position: | 37-509 |
| Cow position: | chr15:38621637-38621167 (view UCSC Genome Browser custom track) |
| Alignm length: | 481 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 229, 183 |
| Conread position: | 37-509 |
| Cow position: | chr15:40569270-40569753 (view UCSC Genome Browser custom track) |
| Alignm length: | 489 |
| Alignm identity: | 333 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 178, 295 |
| Conread position: | 37-511 |
| Cow position: | chr15:39716231-39716712 (view UCSC Genome Browser custom track) |
| Alignm length: | 490 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 178, 259 |
| Conread position: | 37-533 |
| Cow position: | chr15:11729672-11729158 (view UCSC Genome Browser custom track) |
| Alignm length: | 525 |
| Alignm identity: | 348 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 183, 259 |
| Conread position: | 38-287 |
| Cow position: | chr15:47152880-47152630 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 190 |
| Alignm E-value: | 8.99999e-40 |
| Alignm gaps (pig, cow): | 177, 104 |
| Conread position: | 39-199 |
| Cow position: | chr15:36862806-36862646 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 125 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 39-334 |
| Cow position: | chr15:1993490-1993197 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 215 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 134, 77 |
| Conread position: | 39-502 |
| Cow position: | chr15:6185012-6185499 (view UCSC Genome Browser custom track) |
| Alignm length: | 492 |
| Alignm identity: | 330 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 260 |
| Conread position: | 39-512 |
| Cow position: | chr15:45005826-45005331 (view UCSC Genome Browser custom track) |
| Alignm length: | 501 |
| Alignm identity: | 347 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 177, 286 |
| Conread position: | 40-571 |
| Cow position: | chr15:1234380-1233855 (view UCSC Genome Browser custom track) |
| Alignm length: | 543 |
| Alignm identity: | 364 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 226, 164 |
| Conread position: | 40-571 |
| Cow position: | chr15:1241730-1241205 (view UCSC Genome Browser custom track) |
| Alignm length: | 543 |
| Alignm identity: | 365 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 226, 164 |
| Conread position: | 48-506 |
| Cow position: | chr15:24539651-24539176 (view UCSC Genome Browser custom track) |
| Alignm length: | 490 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 273 |
| Conread position: | 49-473 |
| Cow position: | chr15:20126967-20127400 (view UCSC Genome Browser custom track) |
| Alignm length: | 440 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 166, 244 |
| Conread position: | 50-432 |
| Cow position: | chr15:34165074-34164680 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 267 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 171, 246 |
| Conread position: | 55-512 |
| Cow position: | chr15:25072330-25071851 (view UCSC Genome Browser custom track) |
| Alignm length: | 485 |
| Alignm identity: | 344 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 162, 36 |
| Conread position: | 56-260 |
| Cow position: | chr15:33484287-33484076 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 160 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 14, 51 |
| Conread position: | 59-307 |
| Cow position: | chr15:20450676-20450939 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 198 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 8, 84 |
| Conread position: | 74-512 |
| Cow position: | chr15:12687508-12687956 (view UCSC Genome Browser custom track) |
| Alignm length: | 455 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 141, 251 |
| Conread position: | 96-523 |
| Cow position: | chr15:22485060-22485479 (view UCSC Genome Browser custom track) |
| Alignm length: | 440 |
| Alignm identity: | 281 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 156, 127 |
| Conread position: | 122-509 |
| Cow position: | chr15:15137164-15137555 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 272 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 93, 13 |
| Conread position: | 125-264 |
| Cow position: | chr15:15263608-15263753 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 111 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 96, 0 |
| Conread position: | 361-512 |
| Cow position: | chr15:14188506-14188357 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 76, 34 |
Show alignments to all cow chromosomes.