Cow genome map
| Conread name: | LyN1-MLN01D110012 |
| Conread position: | 17-260 |
| Cow position: | chr18:6087589-6087836 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 180 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 198, 20 |
| Conread position: | 22-509 |
| Cow position: | chr18:8912470-8911978 (view UCSC Genome Browser custom track) |
| Alignm length: | 504 |
| Alignm identity: | 343 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 198, 282 |
| Conread position: | 24-214 |
| Cow position: | chr18:1517928-1518115 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 24-533 |
| Cow position: | chr18:39683265-39683785 (view UCSC Genome Browser custom track) |
| Alignm length: | 526 |
| Alignm identity: | 359 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 191, 272 |
| Conread position: | 28-510 |
| Cow position: | chr18:30973534-30974027 (view UCSC Genome Browser custom track) |
| Alignm length: | 499 |
| Alignm identity: | 344 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 187, 263 |
| Conread position: | 30-512 |
| Cow position: | chr18:17339663-17339171 (view UCSC Genome Browser custom track) |
| Alignm length: | 498 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 185, 45 |
| Conread position: | 31-510 |
| Cow position: | chr18:1176628-1176144 (view UCSC Genome Browser custom track) |
| Alignm length: | 493 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 185, 18 |
| Conread position: | 32-510 |
| Cow position: | chr18:22257201-22256712 (view UCSC Genome Browser custom track) |
| Alignm length: | 495 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 188, 263 |
| Conread position: | 34-156 |
| Cow position: | chr18:1971070-1971191 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 98 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 99, 0 |
| Conread position: | 34-287 |
| Cow position: | chr18:38348531-38348790 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 194 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 181, 149 |
| Conread position: | 36-171 |
| Cow position: | chr18:27827327-27827461 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 104 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 36-311 |
| Cow position: | chr18:29268582-29268306 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 221 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 156, 22 |
| Conread position: | 36-510 |
| Cow position: | chr18:14247043-14246565 (view UCSC Genome Browser custom track) |
| Alignm length: | 488 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 239, 184 |
| Conread position: | 37-189 |
| Cow position: | chr18:43134726-43134574 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 124 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 37-259 |
| Cow position: | chr18:17321141-17321372 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 175 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 17, 44 |
| Conread position: | 37-260 |
| Cow position: | chr18:18470688-18470462 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 171 |
| Alignm E-value: | 8e-38 |
| Alignm gaps (pig, cow): | 187, 52 |
| Conread position: | 37-266 |
| Cow position: | chr18:17311292-17311065 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 173 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 17, 42 |
| Conread position: | 37-328 |
| Cow position: | chr18:56481002-56481286 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 220 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 178, 81 |
| Conread position: | 37-396 |
| Cow position: | chr18:13727566-13727915 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 259 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 293, 106 |
| Conread position: | 37-483 |
| Cow position: | chr18:6808590-6808137 (view UCSC Genome Browser custom track) |
| Alignm length: | 464 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 122, 130 |
| Conread position: | 37-504 |
| Cow position: | chr18:464457-464915 (view UCSC Genome Browser custom track) |
| Alignm length: | 475 |
| Alignm identity: | 312 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 228, 23 |
| Conread position: | 37-504 |
| Cow position: | chr18:24230703-24230227 (view UCSC Genome Browser custom track) |
| Alignm length: | 486 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 44 |
| Conread position: | 37-504 |
| Cow position: | chr18:51022572-51023046 (view UCSC Genome Browser custom track) |
| Alignm length: | 486 |
| Alignm identity: | 320 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 178, 258 |
| Conread position: | 37-509 |
| Cow position: | chr18:20220587-20220107 (view UCSC Genome Browser custom track) |
| Alignm length: | 489 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 176, 65 |
| Conread position: | 37-509 |
| Cow position: | chr18:21715949-21716426 (view UCSC Genome Browser custom track) |
| Alignm length: | 489 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 179, 12 |
| Conread position: | 37-509 |
| Cow position: | chr18:30693394-30692916 (view UCSC Genome Browser custom track) |
| Alignm length: | 489 |
| Alignm identity: | 329 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 178, 269 |
| Conread position: | 37-509 |
| Cow position: | chr18:40060447-40060919 (view UCSC Genome Browser custom track) |
| Alignm length: | 488 |
| Alignm identity: | 341 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 275, 184 |
| Conread position: | 37-509 |
| Cow position: | chr18:40702897-40703374 (view UCSC Genome Browser custom track) |
| Alignm length: | 485 |
| Alignm identity: | 330 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 229, 248 |
| Conread position: | 37-510 |
| Cow position: | chr18:32793676-32793193 (view UCSC Genome Browser custom track) |
| Alignm length: | 499 |
| Alignm identity: | 346 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 292, 184 |
| Conread position: | 37-510 |
| Cow position: | chr18:54127700-54127220 (view UCSC Genome Browser custom track) |
| Alignm length: | 488 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 178, 170 |
| Conread position: | 37-511 |
| Cow position: | chr18:37709587-37709100 (view UCSC Genome Browser custom track) |
| Alignm length: | 500 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 135 |
| Conread position: | 38-509 |
| Cow position: | chr18:24145642-24146137 (view UCSC Genome Browser custom track) |
| Alignm length: | 505 |
| Alignm identity: | 343 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 177, 124 |
| Conread position: | 39-259 |
| Cow position: | chr18:43488237-43488011 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 160 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 115, 124 |
| Conread position: | 39-510 |
| Cow position: | chr18:33972269-33972758 (view UCSC Genome Browser custom track) |
| Alignm length: | 497 |
| Alignm identity: | 328 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 47, 298 |
| Conread position: | 39-520 |
| Cow position: | chr18:39936001-39936491 (view UCSC Genome Browser custom track) |
| Alignm length: | 499 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 285 |
| Conread position: | 43-498 |
| Cow position: | chr18:42834545-42834086 (view UCSC Genome Browser custom track) |
| Alignm length: | 472 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 172, 150 |
| Conread position: | 43-504 |
| Cow position: | chr18:44005637-44005167 (view UCSC Genome Browser custom track) |
| Alignm length: | 475 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 172, 269 |
| Conread position: | 50-526 |
| Cow position: | chr18:53534099-53534577 (view UCSC Genome Browser custom track) |
| Alignm length: | 488 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 216, 85 |
| Conread position: | 52-334 |
| Cow position: | chr18:17319701-17319432 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 203 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 86, 170 |
| Conread position: | 57-509 |
| Cow position: | chr18:42160952-42160480 (view UCSC Genome Browser custom track) |
| Alignm length: | 476 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 157, 183 |
| Conread position: | 64-509 |
| Cow position: | chr18:54120813-54120352 (view UCSC Genome Browser custom track) |
| Alignm length: | 467 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 147, 217 |
| Conread position: | 74-509 |
| Cow position: | chr18:11919660-11919225 (view UCSC Genome Browser custom track) |
| Alignm length: | 447 |
| Alignm identity: | 303 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 143, 106 |
| Conread position: | 75-465 |
| Cow position: | chr18:22168247-22168666 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 69 |
| Conread position: | 75-511 |
| Cow position: | chr18:43797605-43798045 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 298 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 135, 21 |
| Conread position: | 95-333 |
| Cow position: | chr18:13702761-13702530 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 179 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 9, 127 |
| Conread position: | 125-509 |
| Cow position: | chr18:7114788-7114416 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 262 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 90, 123 |
| Conread position: | 362-509 |
| Cow position: | chr18:1518531-1518680 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 109 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 26, 0 |
Show alignments to all cow chromosomes.