Cow genome map
| Conread name: | LyN1-MLN01D110012 |
| Conread position: | 8-515 |
| Cow position: | chr19:50658070-50657558 (view UCSC Genome Browser custom track) |
| Alignm length: | 525 |
| Alignm identity: | 354 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 5 |
| Conread position: | 26-334 |
| Cow position: | chr19:30251605-30251313 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 219 |
| Alignm E-value: | 9e-39 |
| Alignm gaps (pig, cow): | 46, 93 |
| Conread position: | 28-509 |
| Cow position: | chr19:14480137-14480627 (view UCSC Genome Browser custom track) |
| Alignm length: | 496 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 187, 20 |
| Conread position: | 29-155 |
| Cow position: | chr19:13221359-13221485 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 102 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 29-260 |
| Cow position: | chr19:42155908-42155671 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 183 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 192, 0 |
| Conread position: | 29-345 |
| Cow position: | chr19:47874791-47874470 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 186, 268 |
| Conread position: | 30-260 |
| Cow position: | chr19:6511226-6511007 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 178 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 23, 89 |
| Conread position: | 30-511 |
| Cow position: | chr19:11209668-11210161 (view UCSC Genome Browser custom track) |
| Alignm length: | 502 |
| Alignm identity: | 338 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 89 |
| Conread position: | 30-513 |
| Cow position: | chr19:45585380-45585867 (view UCSC Genome Browser custom track) |
| Alignm length: | 501 |
| Alignm identity: | 354 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 186, 238 |
| Conread position: | 31-511 |
| Cow position: | chr19:2939372-2939861 (view UCSC Genome Browser custom track) |
| Alignm length: | 501 |
| Alignm identity: | 329 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 184, 87 |
| Conread position: | 31-514 |
| Cow position: | chr19:3930385-3929902 (view UCSC Genome Browser custom track) |
| Alignm length: | 492 |
| Alignm identity: | 329 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 235, 30 |
| Conread position: | 31-519 |
| Cow position: | chr19:33257674-33258173 (view UCSC Genome Browser custom track) |
| Alignm length: | 506 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 184, 301 |
| Conread position: | 33-334 |
| Cow position: | chr19:14380381-14380094 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 221 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 188, 0 |
| Conread position: | 34-270 |
| Cow position: | chr19:6476711-6476940 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 175 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 160, 0 |
| Conread position: | 35-162 |
| Cow position: | chr19:27838476-27838603 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 100 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 47, 71 |
| Conread position: | 35-509 |
| Cow position: | chr19:19008244-19007757 (view UCSC Genome Browser custom track) |
| Alignm length: | 493 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 87 |
| Conread position: | 35-513 |
| Cow position: | chr19:28469166-28469654 (view UCSC Genome Browser custom track) |
| Alignm length: | 497 |
| Alignm identity: | 345 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 180, 39 |
| Conread position: | 36-258 |
| Cow position: | chr19:28446655-28446430 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 171 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 185, 107 |
| Conread position: | 36-334 |
| Cow position: | chr19:30242591-30242308 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 215 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 20, 84 |
| Conread position: | 36-476 |
| Cow position: | chr19:50550532-50550092 (view UCSC Genome Browser custom track) |
| Alignm length: | 454 |
| Alignm identity: | 306 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 20, 10 |
| Conread position: | 36-507 |
| Cow position: | chr19:35641266-35640781 (view UCSC Genome Browser custom track) |
| Alignm length: | 488 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 171, 301 |
| Conread position: | 36-509 |
| Cow position: | chr19:28608912-28608430 (view UCSC Genome Browser custom track) |
| Alignm length: | 494 |
| Alignm identity: | 338 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 296 |
| Conread position: | 36-510 |
| Cow position: | chr19:37277174-37276697 (view UCSC Genome Browser custom track) |
| Alignm length: | 489 |
| Alignm identity: | 329 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 205, 82 |
| Conread position: | 37-153 |
| Cow position: | chr19:7647784-7647900 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 96 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 37-259 |
| Cow position: | chr19:27828292-27828518 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 175 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 173, 68 |
| Conread position: | 37-260 |
| Cow position: | chr19:7715128-7714899 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 176 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 114, 216 |
| Conread position: | 37-266 |
| Cow position: | chr19:39753585-39753351 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 183 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 170, 12 |
| Conread position: | 37-334 |
| Cow position: | chr19:21125652-21125359 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 229 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 180, 106 |
| Conread position: | 37-493 |
| Cow position: | chr19:42246049-42246511 (view UCSC Genome Browser custom track) |
| Alignm length: | 473 |
| Alignm identity: | 316 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 178, 219 |
| Conread position: | 37-507 |
| Cow position: | chr19:6471771-6472236 (view UCSC Genome Browser custom track) |
| Alignm length: | 485 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 131, 122 |
| Conread position: | 37-509 |
| Cow position: | chr19:8550961-8551444 (view UCSC Genome Browser custom track) |
| Alignm length: | 490 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 178, 295 |
| Conread position: | 37-509 |
| Cow position: | chr19:27823674-27824147 (view UCSC Genome Browser custom track) |
| Alignm length: | 488 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 177, 111 |
| Conread position: | 37-509 |
| Cow position: | chr19:28436889-28437371 (view UCSC Genome Browser custom track) |
| Alignm length: | 490 |
| Alignm identity: | 329 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 121 |
| Conread position: | 37-509 |
| Cow position: | chr19:34066334-34065852 (view UCSC Genome Browser custom track) |
| Alignm length: | 489 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 178, 12 |
| Conread position: | 37-509 |
| Cow position: | chr19:38055192-38055674 (view UCSC Genome Browser custom track) |
| Alignm length: | 491 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 169, 146 |
| Conread position: | 37-510 |
| Cow position: | chr19:7700349-7700836 (view UCSC Genome Browser custom track) |
| Alignm length: | 495 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 86, 12 |
| Conread position: | 37-510 |
| Cow position: | chr19:43435185-43434703 (view UCSC Genome Browser custom track) |
| Alignm length: | 491 |
| Alignm identity: | 333 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 180, 82 |
| Conread position: | 37-510 |
| Cow position: | chr19:43751084-43750606 (view UCSC Genome Browser custom track) |
| Alignm length: | 490 |
| Alignm identity: | 338 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 232 |
| Conread position: | 37-510 |
| Cow position: | chr19:50677448-50677931 (view UCSC Genome Browser custom track) |
| Alignm length: | 491 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 179, 128 |
| Conread position: | 37-510 |
| Cow position: | chr19:52332425-52332919 (view UCSC Genome Browser custom track) |
| Alignm length: | 502 |
| Alignm identity: | 346 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 223, 125 |
| Conread position: | 37-512 |
| Cow position: | chr19:28945054-28944576 (view UCSC Genome Browser custom track) |
| Alignm length: | 494 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 173, 138 |
| Conread position: | 38-205 |
| Cow position: | chr19:30263423-30263590 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 137 |
| Alignm E-value: | 9e-39 |
| Alignm gaps (pig, cow): | 81, 16 |
| Conread position: | 38-511 |
| Cow position: | chr19:13227505-13227988 (view UCSC Genome Browser custom track) |
| Alignm length: | 489 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 177, 286 |
| Conread position: | 39-259 |
| Cow position: | chr19:6486068-6485853 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 168 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 28, 22 |
| Conread position: | 39-266 |
| Cow position: | chr19:11241579-11241346 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 178 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 176, 0 |
| Conread position: | 39-507 |
| Cow position: | chr19:35616559-35616089 (view UCSC Genome Browser custom track) |
| Alignm length: | 484 |
| Alignm identity: | 318 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 178, 217 |
| Conread position: | 40-264 |
| Cow position: | chr19:53640313-53640089 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 164 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 176, 24 |
| Conread position: | 45-498 |
| Cow position: | chr19:11111769-11112219 (view UCSC Genome Browser custom track) |
| Alignm length: | 466 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 170, 275 |
| Conread position: | 65-509 |
| Cow position: | chr19:53533806-53533349 (view UCSC Genome Browser custom track) |
| Alignm length: | 467 |
| Alignm identity: | 316 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 155, 86 |
| Conread position: | 74-260 |
| Cow position: | chr19:33082157-33082349 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 149 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 140, 0 |
| Conread position: | 74-311 |
| Cow position: | chr19:24985878-24986117 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 186 |
| Alignm E-value: | 9e-39 |
| Alignm gaps (pig, cow): | 52, 45 |
| Conread position: | 74-509 |
| Cow position: | chr19:11978679-11979124 (view UCSC Genome Browser custom track) |
| Alignm length: | 453 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 141, 222 |
| Conread position: | 75-311 |
| Cow position: | chr19:8824198-8823962 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 181 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 140, 94 |
| Conread position: | 78-518 |
| Cow position: | chr19:12053751-12053306 (view UCSC Genome Browser custom track) |
| Alignm length: | 457 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 138, 196 |
| Conread position: | 78-518 |
| Cow position: | chr19:12066841-12067286 (view UCSC Genome Browser custom track) |
| Alignm length: | 457 |
| Alignm identity: | 310 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 138, 196 |
| Conread position: | 80-334 |
| Cow position: | chr19:2011755-2011505 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 197 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 130, 103 |
| Conread position: | 362-507 |
| Cow position: | chr19:2011245-2011098 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 114 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 41, 72 |
| Conread position: | 363-509 |
| Cow position: | chr19:24986201-24986349 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 41, 0 |
Show alignments to all cow chromosomes.