Cow genome map
| Conread name: | LyN1-MLN01D110012 |
| Conread position: | 7-511 |
| Cow position: | chr2:39753115-39753629 (view UCSC Genome Browser custom track) |
| Alignm length: | 524 |
| Alignm identity: | 346 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 213, 25 |
| Conread position: | 10-509 |
| Cow position: | chr2:30930658-30930161 (view UCSC Genome Browser custom track) |
| Alignm length: | 513 |
| Alignm identity: | 350 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 16 |
| Conread position: | 13-263 |
| Cow position: | chr2:40413181-40413429 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 183 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 18, 12 |
| Conread position: | 13-331 |
| Cow position: | chr2:62460891-62461211 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 229 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 202, 143 |
| Conread position: | 18-507 |
| Cow position: | chr2:36857462-36857969 (view UCSC Genome Browser custom track) |
| Alignm length: | 513 |
| Alignm identity: | 322 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 197, 16 |
| Conread position: | 24-511 |
| Cow position: | chr2:77921489-77921989 (view UCSC Genome Browser custom track) |
| Alignm length: | 509 |
| Alignm identity: | 347 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 196, 267 |
| Conread position: | 28-334 |
| Cow position: | chr2:86168856-86169146 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 227 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 133, 0 |
| Conread position: | 28-509 |
| Cow position: | chr2:16797988-16798464 (view UCSC Genome Browser custom track) |
| Alignm length: | 491 |
| Alignm identity: | 310 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 300, 193 |
| Conread position: | 28-510 |
| Cow position: | chr2:25245007-25245501 (view UCSC Genome Browser custom track) |
| Alignm length: | 502 |
| Alignm identity: | 342 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 264 |
| Conread position: | 29-510 |
| Cow position: | chr2:74691232-74691719 (view UCSC Genome Browser custom track) |
| Alignm length: | 497 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 191, 84 |
| Conread position: | 30-510 |
| Cow position: | chr2:80565596-80566076 (view UCSC Genome Browser custom track) |
| Alignm length: | 495 |
| Alignm identity: | 326 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 185, 52 |
| Conread position: | 31-260 |
| Cow position: | chr2:9019759-9019991 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 184, 30 |
| Conread position: | 31-260 |
| Cow position: | chr2:46774503-46774267 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 181 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 31-310 |
| Cow position: | chr2:85328364-85328636 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 214 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 31-504 |
| Cow position: | chr2:44415601-44416077 (view UCSC Genome Browser custom track) |
| Alignm length: | 488 |
| Alignm identity: | 317 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 92, 112 |
| Conread position: | 31-514 |
| Cow position: | chr2:7547225-7546733 (view UCSC Genome Browser custom track) |
| Alignm length: | 500 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 188, 51 |
| Conread position: | 32-513 |
| Cow position: | chr2:3484332-3484818 (view UCSC Genome Browser custom track) |
| Alignm length: | 498 |
| Alignm identity: | 347 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 148 |
| Conread position: | 33-255 |
| Cow position: | chr2:36621967-36621743 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 34, 86 |
| Conread position: | 34-513 |
| Cow position: | chr2:26527449-26526946 (view UCSC Genome Browser custom track) |
| Alignm length: | 510 |
| Alignm identity: | 349 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 139, 262 |
| Conread position: | 34-513 |
| Cow position: | chr2:64659742-64659263 (view UCSC Genome Browser custom track) |
| Alignm length: | 496 |
| Alignm identity: | 337 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 181, 259 |
| Conread position: | 35-199 |
| Cow position: | chr2:31893935-31894099 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 35-247 |
| Cow position: | chr2:37756276-37756493 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 168 |
| Alignm E-value: | 7.00649e-44 |
| Alignm gaps (pig, cow): | 181, 0 |
| Conread position: | 35-258 |
| Cow position: | chr2:61219850-61219625 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 162 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 178, 139 |
| Conread position: | 35-451 |
| Cow position: | chr2:16807989-16808414 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 185, 262 |
| Conread position: | 35-524 |
| Cow position: | chr2:52373418-52373916 (view UCSC Genome Browser custom track) |
| Alignm length: | 505 |
| Alignm identity: | 348 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 181, 255 |
| Conread position: | 35-531 |
| Cow position: | chr2:46767020-46766513 (view UCSC Genome Browser custom track) |
| Alignm length: | 522 |
| Alignm identity: | 358 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 294, 186 |
| Conread position: | 36-286 |
| Cow position: | chr2:74690830-74691083 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 184 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 200, 0 |
| Conread position: | 36-334 |
| Cow position: | chr2:21635895-21636193 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 131, 106 |
| Conread position: | 36-451 |
| Cow position: | chr2:1633232-1632801 (view UCSC Genome Browser custom track) |
| Alignm length: | 440 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 253 |
| Conread position: | 36-509 |
| Cow position: | chr2:36586529-36587012 (view UCSC Genome Browser custom track) |
| Alignm length: | 490 |
| Alignm identity: | 333 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 185, 254 |
| Conread position: | 36-510 |
| Cow position: | chr2:41630359-41629878 (view UCSC Genome Browser custom track) |
| Alignm length: | 491 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 179, 258 |
| Conread position: | 36-510 |
| Cow position: | chr2:46774816-46775301 (view UCSC Genome Browser custom track) |
| Alignm length: | 492 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 185, 255 |
| Conread position: | 36-512 |
| Cow position: | chr2:5513559-5513091 (view UCSC Genome Browser custom track) |
| Alignm length: | 492 |
| Alignm identity: | 338 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 234, 70 |
| Conread position: | 36-514 |
| Cow position: | chr2:21890407-21890897 (view UCSC Genome Browser custom track) |
| Alignm length: | 498 |
| Alignm identity: | 345 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 179, 255 |
| Conread position: | 36-548 |
| Cow position: | chr2:56316779-56317308 (view UCSC Genome Browser custom track) |
| Alignm length: | 534 |
| Alignm identity: | 357 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 180, 59 |
| Conread position: | 37-190 |
| Cow position: | chr2:57980090-57979939 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 115 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 116, 0 |
| Conread position: | 37-260 |
| Cow position: | chr2:45558219-45557998 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 176 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 30, 80 |
| Conread position: | 37-260 |
| Cow position: | chr2:58342686-58342914 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 178 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 183, 9 |
| Conread position: | 37-260 |
| Cow position: | chr2:66060354-66060128 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 169 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 184, 81 |
| Conread position: | 37-266 |
| Cow position: | chr2:63086801-63087023 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 178, 81 |
| Conread position: | 37-334 |
| Cow position: | chr2:11882154-11881873 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 211 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 144, 49 |
| Conread position: | 37-334 |
| Cow position: | chr2:58852948-58853233 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 218 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 204, 0 |
| Conread position: | 37-498 |
| Cow position: | chr2:55826005-55825537 (view UCSC Genome Browser custom track) |
| Alignm length: | 475 |
| Alignm identity: | 320 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 179, 124 |
| Conread position: | 37-507 |
| Cow position: | chr2:47840166-47839688 (view UCSC Genome Browser custom track) |
| Alignm length: | 486 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 178, 260 |
| Conread position: | 37-508 |
| Cow position: | chr2:44506826-44507303 (view UCSC Genome Browser custom track) |
| Alignm length: | 487 |
| Alignm identity: | 329 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 178, 260 |
| Conread position: | 37-508 |
| Cow position: | chr2:57984246-57984715 (view UCSC Genome Browser custom track) |
| Alignm length: | 481 |
| Alignm identity: | 319 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 235, 156 |
| Conread position: | 37-509 |
| Cow position: | chr2:7295273-7294790 (view UCSC Genome Browser custom track) |
| Alignm length: | 498 |
| Alignm identity: | 347 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 292, 184 |
| Conread position: | 37-509 |
| Cow position: | chr2:32227372-32227854 (view UCSC Genome Browser custom track) |
| Alignm length: | 490 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 183, 253 |
| Conread position: | 37-509 |
| Cow position: | chr2:37171033-37170550 (view UCSC Genome Browser custom track) |
| Alignm length: | 488 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 178, 258 |
| Conread position: | 37-509 |
| Cow position: | chr2:48511901-48512380 (view UCSC Genome Browser custom track) |
| Alignm length: | 490 |
| Alignm identity: | 330 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 169, 161 |
| Conread position: | 37-509 |
| Cow position: | chr2:52328703-52329181 (view UCSC Genome Browser custom track) |
| Alignm length: | 495 |
| Alignm identity: | 332 |
| Alignm E-value: | 7.00649e-43 |
| Alignm gaps (pig, cow): | 56, 258 |
| Conread position: | 37-509 |
| Cow position: | chr2:65682713-65683200 (view UCSC Genome Browser custom track) |
| Alignm length: | 492 |
| Alignm identity: | 310 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 151, 260 |
| Conread position: | 37-509 |
| Cow position: | chr2:70651826-70651353 (view UCSC Genome Browser custom track) |
| Alignm length: | 483 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 229, 177 |
| Conread position: | 37-509 |
| Cow position: | chr2:76038889-76039367 (view UCSC Genome Browser custom track) |
| Alignm length: | 491 |
| Alignm identity: | 330 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 213, 81 |
| Conread position: | 37-509 |
| Cow position: | chr2:82290333-82290815 (view UCSC Genome Browser custom track) |
| Alignm length: | 488 |
| Alignm identity: | 328 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 183, 21 |
| Conread position: | 37-511 |
| Cow position: | chr2:66701506-66701020 (view UCSC Genome Browser custom track) |
| Alignm length: | 493 |
| Alignm identity: | 337 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 183, 259 |
| Conread position: | 37-530 |
| Cow position: | chr2:80585960-80585459 (view UCSC Genome Browser custom track) |
| Alignm length: | 511 |
| Alignm identity: | 346 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 178, 12 |
| Conread position: | 38-264 |
| Cow position: | chr2:80147531-80147763 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 181 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 177, 0 |
| Conread position: | 39-498 |
| Cow position: | chr2:47571898-47571431 (view UCSC Genome Browser custom track) |
| Alignm length: | 472 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 182, 257 |
| Conread position: | 39-510 |
| Cow position: | chr2:18160189-18160670 (view UCSC Genome Browser custom track) |
| Alignm length: | 486 |
| Alignm identity: | 333 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 176, 47 |
| Conread position: | 40-510 |
| Cow position: | chr2:596528-597001 (view UCSC Genome Browser custom track) |
| Alignm length: | 487 |
| Alignm identity: | 313 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 180, 252 |
| Conread position: | 40-525 |
| Cow position: | chr2:58697341-58697842 (view UCSC Genome Browser custom track) |
| Alignm length: | 510 |
| Alignm identity: | 337 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 18 |
| Conread position: | 41-509 |
| Cow position: | chr2:74229869-74230356 (view UCSC Genome Browser custom track) |
| Alignm length: | 492 |
| Alignm identity: | 329 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 175, 250 |
| Conread position: | 43-257 |
| Cow position: | chr2:46025939-46026157 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 167 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 172, 99 |
| Conread position: | 43-514 |
| Cow position: | chr2:68157393-68156919 (view UCSC Genome Browser custom track) |
| Alignm length: | 489 |
| Alignm identity: | 338 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 167, 75 |
| Conread position: | 44-286 |
| Cow position: | chr2:28587367-28587609 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 182 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 171, 58 |
| Conread position: | 49-180 |
| Cow position: | chr2:80094382-80094251 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 105 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 95, 108 |
| Conread position: | 49-328 |
| Cow position: | chr2:75069250-75068967 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 209 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 101, 118 |
| Conread position: | 51-511 |
| Cow position: | chr2:11252137-11252597 (view UCSC Genome Browser custom track) |
| Alignm length: | 476 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 65 |
| Conread position: | 58-334 |
| Cow position: | chr2:35400489-35400218 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 198 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 9, 21 |
| Conread position: | 72-509 |
| Cow position: | chr2:55287183-55287630 (view UCSC Genome Browser custom track) |
| Alignm length: | 454 |
| Alignm identity: | 308 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 143, 219 |
| Conread position: | 76-260 |
| Cow position: | chr2:68958599-68958787 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 143 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 131, 158 |
| Conread position: | 106-510 |
| Cow position: | chr2:19148459-19148871 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 271 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 109, 190 |
| Conread position: | 143-313 |
| Cow position: | chr2:24812825-24812660 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 124 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 16, 25 |
| Conread position: | 157-509 |
| Cow position: | chr2:57979686-57979320 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 239 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 58, 136 |
| Conread position: | 362-509 |
| Cow position: | chr2:35400158-35400008 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 111 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 363-509 |
| Cow position: | chr2:21636258-21636406 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 119 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 41, 0 |
Show alignments to all cow chromosomes.