Cow genome map
| Conread name: | LyN1-MLN01D110012 |
| Conread position: | 23-510 |
| Cow position: | chr20:39657097-39656603 (view UCSC Genome Browser custom track) |
| Alignm length: | 502 |
| Alignm identity: | 320 |
| Alignm E-value: | 8.00001e-41 |
| Alignm gaps (pig, cow): | 194, 142 |
| Conread position: | 26-513 |
| Cow position: | chr20:14050886-14051383 (view UCSC Genome Browser custom track) |
| Alignm length: | 504 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 194, 135 |
| Conread position: | 29-511 |
| Cow position: | chr20:34102802-34102312 (view UCSC Genome Browser custom track) |
| Alignm length: | 501 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 192, 123 |
| Conread position: | 31-511 |
| Cow position: | chr20:793607-793117 (view UCSC Genome Browser custom track) |
| Alignm length: | 497 |
| Alignm identity: | 338 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 184, 260 |
| Conread position: | 34-260 |
| Cow position: | chr20:30543970-30544204 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 175 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 33, 38 |
| Conread position: | 34-279 |
| Cow position: | chr20:30109311-30109057 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 194 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 146, 106 |
| Conread position: | 34-333 |
| Cow position: | chr20:24420247-24419961 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 223 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 117, 188 |
| Conread position: | 34-512 |
| Cow position: | chr20:17527191-17527665 (view UCSC Genome Browser custom track) |
| Alignm length: | 493 |
| Alignm identity: | 337 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 181, 249 |
| Conread position: | 34-514 |
| Cow position: | chr20:14801426-14801917 (view UCSC Genome Browser custom track) |
| Alignm length: | 507 |
| Alignm identity: | 342 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 146, 127 |
| Conread position: | 35-196 |
| Cow position: | chr20:34834271-34834110 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 35-518 |
| Cow position: | chr20:26977829-26977335 (view UCSC Genome Browser custom track) |
| Alignm length: | 500 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 180, 261 |
| Conread position: | 36-334 |
| Cow position: | chr20:36964106-36963819 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 217 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 19, 87 |
| Conread position: | 36-435 |
| Cow position: | chr20:20141989-20142390 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 280 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 31, 86 |
| Conread position: | 37-498 |
| Cow position: | chr20:20143676-20143207 (view UCSC Genome Browser custom track) |
| Alignm length: | 479 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 178, 254 |
| Conread position: | 37-509 |
| Cow position: | chr20:2228296-2228781 (view UCSC Genome Browser custom track) |
| Alignm length: | 494 |
| Alignm identity: | 325 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 176, 71 |
| Conread position: | 37-509 |
| Cow position: | chr20:2248413-2248893 (view UCSC Genome Browser custom track) |
| Alignm length: | 492 |
| Alignm identity: | 333 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 178, 28 |
| Conread position: | 37-509 |
| Cow position: | chr20:2306664-2307146 (view UCSC Genome Browser custom track) |
| Alignm length: | 497 |
| Alignm identity: | 343 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 292, 184 |
| Conread position: | 37-509 |
| Cow position: | chr20:5765946-5765464 (view UCSC Genome Browser custom track) |
| Alignm length: | 489 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 176, 21 |
| Conread position: | 37-509 |
| Cow position: | chr20:6880455-6879984 (view UCSC Genome Browser custom track) |
| Alignm length: | 488 |
| Alignm identity: | 329 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 5, 239 |
| Conread position: | 37-509 |
| Cow position: | chr20:19249913-19250383 (view UCSC Genome Browser custom track) |
| Alignm length: | 487 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 178, 81 |
| Conread position: | 37-517 |
| Cow position: | chr20:17534167-17534656 (view UCSC Genome Browser custom track) |
| Alignm length: | 496 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 178, 203 |
| Conread position: | 37-536 |
| Cow position: | chr20:3546217-3546725 (view UCSC Genome Browser custom track) |
| Alignm length: | 515 |
| Alignm identity: | 351 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 178, 254 |
| Conread position: | 38-268 |
| Cow position: | chr20:2095896-2095661 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 176 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 177, 161 |
| Conread position: | 39-396 |
| Cow position: | chr20:5301528-5301872 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 248 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 45, 99 |
| Conread position: | 40-287 |
| Cow position: | chr20:27730811-27730568 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 179 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 177, 33 |
| Conread position: | 43-509 |
| Cow position: | chr20:3493993-3494469 (view UCSC Genome Browser custom track) |
| Alignm length: | 483 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 174, 32 |
| Conread position: | 67-673 |
| Cow position: | chr20:26462889-26463503 (view UCSC Genome Browser custom track) |
| Alignm length: | 620 |
| Alignm identity: | 276 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 27, 245 |
| Conread position: | 72-334 |
| Cow position: | chr20:3542141-3542387 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 192 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 77-510 |
| Cow position: | chr20:36042599-36042146 (view UCSC Genome Browser custom track) |
| Alignm length: | 460 |
| Alignm identity: | 298 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 43, 164 |
| Conread position: | 99-513 |
| Cow position: | chr20:4237635-4237216 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 284 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 167, 186 |
| Conread position: | 110-510 |
| Cow position: | chr20:16608915-16609323 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 275 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 110, 83 |
Show alignments to all cow chromosomes.