Cow genome map
| Conread name: | LyN1-MLN01D110012 |
| Conread position: | 21-509 |
| Cow position: | chr21:12193937-12193438 (view UCSC Genome Browser custom track) |
| Alignm length: | 507 |
| Alignm identity: | 341 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 137, 146 |
| Conread position: | 27-509 |
| Cow position: | chr21:40223603-40223111 (view UCSC Genome Browser custom track) |
| Alignm length: | 497 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 190, 92 |
| Conread position: | 29-509 |
| Cow position: | chr21:6392683-6392201 (view UCSC Genome Browser custom track) |
| Alignm length: | 503 |
| Alignm identity: | 341 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 191, 124 |
| Conread position: | 29-510 |
| Cow position: | chr21:1268745-1268257 (view UCSC Genome Browser custom track) |
| Alignm length: | 502 |
| Alignm identity: | 342 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 186, 73 |
| Conread position: | 31-528 |
| Cow position: | chr21:14749158-14748656 (view UCSC Genome Browser custom track) |
| Alignm length: | 514 |
| Alignm identity: | 357 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 184, 260 |
| Conread position: | 32-495 |
| Cow position: | chr21:8163204-8162741 (view UCSC Genome Browser custom track) |
| Alignm length: | 476 |
| Alignm identity: | 307 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 183, 12 |
| Conread position: | 32-511 |
| Cow position: | chr21:22205066-22205554 (view UCSC Genome Browser custom track) |
| Alignm length: | 493 |
| Alignm identity: | 330 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 183, 209 |
| Conread position: | 33-498 |
| Cow position: | chr21:3625447-3624984 (view UCSC Genome Browser custom track) |
| Alignm length: | 477 |
| Alignm identity: | 330 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 127 |
| Conread position: | 34-219 |
| Cow position: | chr21:12632822-12633005 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 127, 0 |
| Conread position: | 34-311 |
| Cow position: | chr21:2944149-2944436 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 212 |
| Alignm E-value: | 8.99998e-41 |
| Alignm gaps (pig, cow): | 173, 158 |
| Conread position: | 34-509 |
| Cow position: | chr21:18599753-18599269 (view UCSC Genome Browser custom track) |
| Alignm length: | 491 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 172, 258 |
| Conread position: | 35-509 |
| Cow position: | chr21:47956799-47956314 (view UCSC Genome Browser custom track) |
| Alignm length: | 491 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 231, 39 |
| Conread position: | 36-264 |
| Cow position: | chr21:17928376-17928619 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 188 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 79, 151 |
| Conread position: | 36-435 |
| Cow position: | chr21:11730728-11731124 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 272 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 119, 80 |
| Conread position: | 37-147 |
| Cow position: | chr21:21033877-21033767 (view UCSC Genome Browser custom track) |
| Alignm length: | 111 |
| Alignm identity: | 90 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 37-280 |
| Cow position: | chr21:36011100-36010850 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 187 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 178, 0 |
| Conread position: | 37-333 |
| Cow position: | chr21:395188-394892 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 220 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 184, 27 |
| Conread position: | 37-334 |
| Cow position: | chr21:36215342-36215620 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 211 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 131, 81 |
| Conread position: | 37-396 |
| Cow position: | chr21:3477666-3477304 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 255 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 28, 51 |
| Conread position: | 37-498 |
| Cow position: | chr21:24815950-24816419 (view UCSC Genome Browser custom track) |
| Alignm length: | 477 |
| Alignm identity: | 329 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 178, 254 |
| Conread position: | 37-504 |
| Cow position: | chr21:47964425-47963948 (view UCSC Genome Browser custom track) |
| Alignm length: | 482 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 179, 259 |
| Conread position: | 37-508 |
| Cow position: | chr21:26194147-26193664 (view UCSC Genome Browser custom track) |
| Alignm length: | 492 |
| Alignm identity: | 319 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 27, 63 |
| Conread position: | 37-509 |
| Cow position: | chr21:32448817-32448335 (view UCSC Genome Browser custom track) |
| Alignm length: | 490 |
| Alignm identity: | 323 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 178, 294 |
| Conread position: | 37-510 |
| Cow position: | chr21:22117381-22117872 (view UCSC Genome Browser custom track) |
| Alignm length: | 501 |
| Alignm identity: | 353 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 48 |
| Conread position: | 37-512 |
| Cow position: | chr21:31483852-31483366 (view UCSC Genome Browser custom track) |
| Alignm length: | 501 |
| Alignm identity: | 348 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 292, 184 |
| Conread position: | 39-247 |
| Cow position: | chr21:32418857-32418643 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 163 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 182, 0 |
| Conread position: | 39-334 |
| Cow position: | chr21:31768460-31768179 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 220 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 84 |
| Conread position: | 43-187 |
| Cow position: | chr21:20591761-20591619 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 142, 73 |
| Conread position: | 45-262 |
| Cow position: | chr21:7172500-7172279 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 116, 73 |
| Conread position: | 55-304 |
| Cow position: | chr21:21739235-21738982 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 176 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 161, 136 |
| Conread position: | 59-308 |
| Cow position: | chr21:11161285-11161027 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 197 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 226 |
| Conread position: | 64-528 |
| Cow position: | chr21:29488102-29487618 (view UCSC Genome Browser custom track) |
| Alignm length: | 497 |
| Alignm identity: | 329 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 157, 31 |
| Conread position: | 83-509 |
| Cow position: | chr21:41562623-41562186 (view UCSC Genome Browser custom track) |
| Alignm length: | 445 |
| Alignm identity: | 299 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 132, 208 |
| Conread position: | 294-511 |
| Cow position: | chr21:11160764-11160544 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 57, 184 |
Show alignments to all cow chromosomes.