Cow genome map
| Conread name: | LyN1-MLN01D110012 |
| Conread position: | 4-514 |
| Cow position: | chr24:33116000-33115479 (view UCSC Genome Browser custom track) |
| Alignm length: | 528 |
| Alignm identity: | 354 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 27 |
| Conread position: | 20-504 |
| Cow position: | chr24:42977019-42977517 (view UCSC Genome Browser custom track) |
| Alignm length: | 503 |
| Alignm identity: | 342 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 199, 65 |
| Conread position: | 24-513 |
| Cow position: | chr24:16979024-16979524 (view UCSC Genome Browser custom track) |
| Alignm length: | 507 |
| Alignm identity: | 346 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 191, 267 |
| Conread position: | 33-260 |
| Cow position: | chr24:9281680-9281450 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 174 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 31, 105 |
| Conread position: | 33-504 |
| Cow position: | chr24:31491213-31490736 (view UCSC Genome Browser custom track) |
| Alignm length: | 486 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 183, 59 |
| Conread position: | 34-259 |
| Cow position: | chr24:8672562-8672794 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 178 |
| Alignm E-value: | 8.99998e-41 |
| Alignm gaps (pig, cow): | 126, 12 |
| Conread position: | 34-264 |
| Cow position: | chr24:45164421-45164192 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 169 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 181, 42 |
| Conread position: | 34-512 |
| Cow position: | chr24:5910999-5911489 (view UCSC Genome Browser custom track) |
| Alignm length: | 494 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 181, 287 |
| Conread position: | 34-517 |
| Cow position: | chr24:30564640-30564139 (view UCSC Genome Browser custom track) |
| Alignm length: | 505 |
| Alignm identity: | 337 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 270 |
| Conread position: | 34-527 |
| Cow position: | chr24:38661490-38660986 (view UCSC Genome Browser custom track) |
| Alignm length: | 514 |
| Alignm identity: | 345 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 181, 299 |
| Conread position: | 34-545 |
| Cow position: | chr24:43937007-43936483 (view UCSC Genome Browser custom track) |
| Alignm length: | 532 |
| Alignm identity: | 357 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 181, 73 |
| Conread position: | 35-498 |
| Cow position: | chr24:37289011-37288559 (view UCSC Genome Browser custom track) |
| Alignm length: | 467 |
| Alignm identity: | 308 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 123 |
| Conread position: | 35-509 |
| Cow position: | chr24:5922069-5922554 (view UCSC Genome Browser custom track) |
| Alignm length: | 491 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 180, 256 |
| Conread position: | 36-487 |
| Cow position: | chr24:16572167-16571711 (view UCSC Genome Browser custom track) |
| Alignm length: | 467 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 179, 125 |
| Conread position: | 36-509 |
| Cow position: | chr24:12030960-12030479 (view UCSC Genome Browser custom track) |
| Alignm length: | 489 |
| Alignm identity: | 337 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 185, 261 |
| Conread position: | 36-509 |
| Cow position: | chr24:13307295-13307771 (view UCSC Genome Browser custom track) |
| Alignm length: | 487 |
| Alignm identity: | 323 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 184, 245 |
| Conread position: | 36-510 |
| Cow position: | chr24:42654530-42654045 (view UCSC Genome Browser custom track) |
| Alignm length: | 493 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 179, 255 |
| Conread position: | 37-219 |
| Cow position: | chr24:33074607-33074426 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 145 |
| Alignm E-value: | 8.99998e-41 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 37-250 |
| Cow position: | chr24:14077740-14077959 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 166 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 179, 0 |
| Conread position: | 37-306 |
| Cow position: | chr24:18565964-18566235 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 217 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 118, 131 |
| Conread position: | 37-482 |
| Cow position: | chr24:5909561-5910012 (view UCSC Genome Browser custom track) |
| Alignm length: | 462 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 178, 254 |
| Conread position: | 37-509 |
| Cow position: | chr24:5915611-5916093 (view UCSC Genome Browser custom track) |
| Alignm length: | 493 |
| Alignm identity: | 338 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 178, 265 |
| Conread position: | 37-509 |
| Cow position: | chr24:11650585-11650103 (view UCSC Genome Browser custom track) |
| Alignm length: | 487 |
| Alignm identity: | 328 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 178, 124 |
| Conread position: | 37-510 |
| Cow position: | chr24:2129543-2130016 (view UCSC Genome Browser custom track) |
| Alignm length: | 487 |
| Alignm identity: | 323 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 184, 125 |
| Conread position: | 37-510 |
| Cow position: | chr24:5545336-5544864 (view UCSC Genome Browser custom track) |
| Alignm length: | 482 |
| Alignm identity: | 316 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 238, 124 |
| Conread position: | 37-510 |
| Cow position: | chr24:37853406-37852922 (view UCSC Genome Browser custom track) |
| Alignm length: | 493 |
| Alignm identity: | 324 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 180, 288 |
| Conread position: | 37-510 |
| Cow position: | chr24:39408363-39408855 (view UCSC Genome Browser custom track) |
| Alignm length: | 500 |
| Alignm identity: | 325 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 177, 215 |
| Conread position: | 37-511 |
| Cow position: | chr24:26660910-26661395 (view UCSC Genome Browser custom track) |
| Alignm length: | 492 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 179, 62 |
| Conread position: | 37-518 |
| Cow position: | chr24:41236692-41236206 (view UCSC Genome Browser custom track) |
| Alignm length: | 497 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 178, 124 |
| Conread position: | 37-530 |
| Cow position: | chr24:6198517-6198011 (view UCSC Genome Browser custom track) |
| Alignm length: | 514 |
| Alignm identity: | 354 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 178, 254 |
| Conread position: | 38-510 |
| Cow position: | chr24:39199112-39199594 (view UCSC Genome Browser custom track) |
| Alignm length: | 489 |
| Alignm identity: | 338 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 177, 31 |
| Conread position: | 39-482 |
| Cow position: | chr24:25914745-25915200 (view UCSC Genome Browser custom track) |
| Alignm length: | 459 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 177, 286 |
| Conread position: | 40-219 |
| Cow position: | chr24:35050714-35050891 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 43-294 |
| Cow position: | chr24:7036392-7036646 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 192 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 178, 46 |
| Conread position: | 52-311 |
| Cow position: | chr24:10796975-10797233 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 181 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 162, 46 |
| Conread position: | 72-509 |
| Cow position: | chr24:22615959-22615513 (view UCSC Genome Browser custom track) |
| Alignm length: | 455 |
| Alignm identity: | 301 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 144, 56 |
| Conread position: | 74-334 |
| Cow position: | chr24:8350294-8350538 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 194 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 74-509 |
| Cow position: | chr24:20029506-20029954 (view UCSC Genome Browser custom track) |
| Alignm length: | 454 |
| Alignm identity: | 294 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 141, 16 |
| Conread position: | 82-510 |
| Cow position: | chr24:10480950-10481368 (view UCSC Genome Browser custom track) |
| Alignm length: | 440 |
| Alignm identity: | 291 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 184, 61 |
| Conread position: | 119-509 |
| Cow position: | chr24:26694846-26695253 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 263 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 93, 24 |
| Conread position: | 132-327 |
| Cow position: | chr24:7778852-7778654 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 162-509 |
| Cow position: | chr24:23788799-23788442 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 233 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 53, 142 |
Show alignments to all cow chromosomes.