Cow genome map
| Conread name: | LyN1-MLN01D110012 |
| Conread position: | 3-260 |
| Cow position: | chr25:4616995-4617258 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 204 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 29 |
| Conread position: | 8-513 |
| Cow position: | chr25:3630741-3631256 (view UCSC Genome Browser custom track) |
| Alignm length: | 522 |
| Alignm identity: | 347 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 212, 98 |
| Conread position: | 15-566 |
| Cow position: | chr25:12664587-12664029 (view UCSC Genome Browser custom track) |
| Alignm length: | 571 |
| Alignm identity: | 390 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 278 |
| Conread position: | 22-247 |
| Cow position: | chr25:3739123-3738903 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 30-179 |
| Cow position: | chr25:18308002-18307853 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 30-504 |
| Cow position: | chr25:10152651-10152170 (view UCSC Genome Browser custom track) |
| Alignm length: | 497 |
| Alignm identity: | 350 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 208 |
| Conread position: | 30-512 |
| Cow position: | chr25:6918669-6918160 (view UCSC Genome Browser custom track) |
| Alignm length: | 511 |
| Alignm identity: | 351 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 344 |
| Conread position: | 30-512 |
| Cow position: | chr25:30473890-30473398 (view UCSC Genome Browser custom track) |
| Alignm length: | 503 |
| Alignm identity: | 349 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 185, 261 |
| Conread position: | 30-512 |
| Cow position: | chr25:34686051-34686532 (view UCSC Genome Browser custom track) |
| Alignm length: | 495 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 214, 179 |
| Conread position: | 31-510 |
| Cow position: | chr25:21133337-21132850 (view UCSC Genome Browser custom track) |
| Alignm length: | 500 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 186, 102 |
| Conread position: | 31-531 |
| Cow position: | chr25:13714309-13713807 (view UCSC Genome Browser custom track) |
| Alignm length: | 515 |
| Alignm identity: | 346 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 185, 259 |
| Conread position: | 32-257 |
| Cow position: | chr25:41238339-41238112 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 189, 52 |
| Conread position: | 34-219 |
| Cow position: | chr25:5202293-5202477 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 131, 0 |
| Conread position: | 34-260 |
| Cow position: | chr25:14532911-14532682 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 180 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 183, 136 |
| Conread position: | 34-512 |
| Cow position: | chr25:7771347-7770847 (view UCSC Genome Browser custom track) |
| Alignm length: | 506 |
| Alignm identity: | 337 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 118 |
| Conread position: | 34-517 |
| Cow position: | chr25:21519077-21518590 (view UCSC Genome Browser custom track) |
| Alignm length: | 498 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 181, 298 |
| Conread position: | 35-498 |
| Cow position: | chr25:4624841-4625313 (view UCSC Genome Browser custom track) |
| Alignm length: | 481 |
| Alignm identity: | 320 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 160, 291 |
| Conread position: | 36-486 |
| Cow position: | chr25:8623946-8624419 (view UCSC Genome Browser custom track) |
| Alignm length: | 477 |
| Alignm identity: | 320 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 124, 265 |
| Conread position: | 36-509 |
| Cow position: | chr25:6276227-6275743 (view UCSC Genome Browser custom track) |
| Alignm length: | 489 |
| Alignm identity: | 337 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 185, 268 |
| Conread position: | 36-509 |
| Cow position: | chr25:6879644-6879159 (view UCSC Genome Browser custom track) |
| Alignm length: | 491 |
| Alignm identity: | 330 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 290 |
| Conread position: | 36-509 |
| Cow position: | chr25:23600170-23600647 (view UCSC Genome Browser custom track) |
| Alignm length: | 486 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 179, 269 |
| Conread position: | 37-172 |
| Cow position: | chr25:1100198-1100064 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 107 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 60, 83 |
| Conread position: | 37-184 |
| Cow position: | chr25:34764294-34764441 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 116 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 37-205 |
| Cow position: | chr25:17372980-17373148 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 134 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 37-260 |
| Cow position: | chr25:13675034-13674806 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 180 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 178, 0 |
| Conread position: | 37-287 |
| Cow position: | chr25:10339258-10339514 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 191 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 120, 0 |
| Conread position: | 37-334 |
| Cow position: | chr25:41131492-41131209 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 213 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 183, 0 |
| Conread position: | 37-508 |
| Cow position: | chr25:34038640-34039117 (view UCSC Genome Browser custom track) |
| Alignm length: | 485 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 184, 91 |
| Conread position: | 37-509 |
| Cow position: | chr25:6808306-6808789 (view UCSC Genome Browser custom track) |
| Alignm length: | 487 |
| Alignm identity: | 330 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 180, 259 |
| Conread position: | 37-509 |
| Cow position: | chr25:7221466-7221001 (view UCSC Genome Browser custom track) |
| Alignm length: | 487 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 197, 97 |
| Conread position: | 37-509 |
| Cow position: | chr25:11650730-11651213 (view UCSC Genome Browser custom track) |
| Alignm length: | 489 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 180, 259 |
| Conread position: | 37-509 |
| Cow position: | chr25:12244060-12244543 (view UCSC Genome Browser custom track) |
| Alignm length: | 490 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 178, 259 |
| Conread position: | 37-509 |
| Cow position: | chr25:14532491-14532008 (view UCSC Genome Browser custom track) |
| Alignm length: | 498 |
| Alignm identity: | 346 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 291, 184 |
| Conread position: | 37-509 |
| Cow position: | chr25:20051626-20051155 (view UCSC Genome Browser custom track) |
| Alignm length: | 483 |
| Alignm identity: | 311 |
| Alignm E-value: | 9.00054e-42 |
| Alignm gaps (pig, cow): | 179, 237 |
| Conread position: | 37-509 |
| Cow position: | chr25:20259266-20258789 (view UCSC Genome Browser custom track) |
| Alignm length: | 489 |
| Alignm identity: | 320 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 178, 39 |
| Conread position: | 37-509 |
| Cow position: | chr25:22814162-22814642 (view UCSC Genome Browser custom track) |
| Alignm length: | 488 |
| Alignm identity: | 317 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 180, 62 |
| Conread position: | 37-510 |
| Cow position: | chr25:18443378-18443862 (view UCSC Genome Browser custom track) |
| Alignm length: | 493 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 139 |
| Conread position: | 37-511 |
| Cow position: | chr25:36156962-36156477 (view UCSC Genome Browser custom track) |
| Alignm length: | 493 |
| Alignm identity: | 341 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 178, 254 |
| Conread position: | 37-520 |
| Cow position: | chr25:12250166-12250660 (view UCSC Genome Browser custom track) |
| Alignm length: | 500 |
| Alignm identity: | 337 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 183, 288 |
| Conread position: | 38-507 |
| Cow position: | chr25:31979488-31979966 (view UCSC Genome Browser custom track) |
| Alignm length: | 489 |
| Alignm identity: | 322 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 177, 143 |
| Conread position: | 38-511 |
| Cow position: | chr25:32751389-32751869 (view UCSC Genome Browser custom track) |
| Alignm length: | 488 |
| Alignm identity: | 318 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 179, 37 |
| Conread position: | 39-287 |
| Cow position: | chr25:21141290-21141035 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 187 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 174, 93 |
| Conread position: | 39-494 |
| Cow position: | chr25:29251741-29251273 (view UCSC Genome Browser custom track) |
| Alignm length: | 474 |
| Alignm identity: | 320 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 176, 262 |
| Conread position: | 39-498 |
| Cow position: | chr25:32677040-32677494 (view UCSC Genome Browser custom track) |
| Alignm length: | 470 |
| Alignm identity: | 310 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 274, 186 |
| Conread position: | 43-345 |
| Cow position: | chr25:10726650-10726951 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 226 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 173, 91 |
| Conread position: | 55-495 |
| Cow position: | chr25:11266317-11265854 (view UCSC Genome Browser custom track) |
| Alignm length: | 464 |
| Alignm identity: | 308 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 119, 0 |
| Conread position: | 64-509 |
| Cow position: | chr25:7509062-7509514 (view UCSC Genome Browser custom track) |
| Alignm length: | 464 |
| Alignm identity: | 312 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 99, 70 |
| Conread position: | 78-511 |
| Cow position: | chr25:5776796-5777242 (view UCSC Genome Browser custom track) |
| Alignm length: | 453 |
| Alignm identity: | 294 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 142, 28 |
| Conread position: | 84-509 |
| Cow position: | chr25:15477099-15477539 (view UCSC Genome Browser custom track) |
| Alignm length: | 448 |
| Alignm identity: | 297 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 192, 64 |
| Conread position: | 86-312 |
| Cow position: | chr25:7489754-7489530 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 180 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 131, 65 |
| Conread position: | 135-257 |
| Cow position: | chr25:16134869-16134997 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 103 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 222-512 |
| Cow position: | chr25:5202506-5202815 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 213 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 81, 147 |
| Conread position: | 363-509 |
| Cow position: | chr25:37619832-37619685 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 111 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 39, 142 |
Show alignments to all cow chromosomes.