Cow genome map
| Conread name: | LyN1-MLN01D110012 |
| Conread position: | 24-260 |
| Cow position: | chr29:5099323-5099565 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 187 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 192, 0 |
| Conread position: | 26-510 |
| Cow position: | chr29:592789-593280 (view UCSC Genome Browser custom track) |
| Alignm length: | 503 |
| Alignm identity: | 347 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 189, 265 |
| Conread position: | 33-475 |
| Cow position: | chr29:42987025-42986575 (view UCSC Genome Browser custom track) |
| Alignm length: | 457 |
| Alignm identity: | 312 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 180, 48 |
| Conread position: | 34-513 |
| Cow position: | chr29:40312675-40313166 (view UCSC Genome Browser custom track) |
| Alignm length: | 496 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 187, 261 |
| Conread position: | 35-187 |
| Cow position: | chr29:28693100-28692948 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 120 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 35-203 |
| Cow position: | chr29:32570415-32570245 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 35-219 |
| Cow position: | chr29:23476043-23475859 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 148 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 36-509 |
| Cow position: | chr29:29943741-29944224 (view UCSC Genome Browser custom track) |
| Alignm length: | 491 |
| Alignm identity: | 337 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 179, 255 |
| Conread position: | 36-509 |
| Cow position: | chr29:35767633-35767153 (view UCSC Genome Browser custom track) |
| Alignm length: | 486 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 169, 178 |
| Conread position: | 37-247 |
| Cow position: | chr29:35764753-35764967 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 165 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 165, 81 |
| Conread position: | 37-260 |
| Cow position: | chr29:20302172-20301943 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 173 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 183, 0 |
| Conread position: | 37-265 |
| Cow position: | chr29:31821728-31821957 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 167 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 180, 94 |
| Conread position: | 37-304 |
| Cow position: | chr29:6147033-6147307 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 205 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 178, 0 |
| Conread position: | 37-334 |
| Cow position: | chr29:5150419-5150118 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 217 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 149, 210 |
| Conread position: | 37-493 |
| Cow position: | chr29:39006445-39006914 (view UCSC Genome Browser custom track) |
| Alignm length: | 474 |
| Alignm identity: | 309 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 179, 98 |
| Conread position: | 37-494 |
| Cow position: | chr29:38372085-38372549 (view UCSC Genome Browser custom track) |
| Alignm length: | 470 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 178, 259 |
| Conread position: | 37-502 |
| Cow position: | chr29:1749178-1748730 (view UCSC Genome Browser custom track) |
| Alignm length: | 472 |
| Alignm identity: | 306 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 235, 189 |
| Conread position: | 37-504 |
| Cow position: | chr29:3348489-3348012 (view UCSC Genome Browser custom track) |
| Alignm length: | 481 |
| Alignm identity: | 320 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 184, 124 |
| Conread position: | 37-505 |
| Cow position: | chr29:22103456-22102981 (view UCSC Genome Browser custom track) |
| Alignm length: | 483 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 179, 254 |
| Conread position: | 37-509 |
| Cow position: | chr29:12168321-12168811 (view UCSC Genome Browser custom track) |
| Alignm length: | 507 |
| Alignm identity: | 358 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 82 |
| Conread position: | 37-509 |
| Cow position: | chr29:13860126-13860602 (view UCSC Genome Browser custom track) |
| Alignm length: | 481 |
| Alignm identity: | 319 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 238, 111 |
| Conread position: | 37-509 |
| Cow position: | chr29:31859732-31859250 (view UCSC Genome Browser custom track) |
| Alignm length: | 488 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 260 |
| Conread position: | 37-510 |
| Cow position: | chr29:11403458-11402978 (view UCSC Genome Browser custom track) |
| Alignm length: | 489 |
| Alignm identity: | 328 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 183, 126 |
| Conread position: | 37-512 |
| Cow position: | chr29:5928299-5927821 (view UCSC Genome Browser custom track) |
| Alignm length: | 493 |
| Alignm identity: | 321 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 184, 12 |
| Conread position: | 37-515 |
| Cow position: | chr29:17348714-17348229 (view UCSC Genome Browser custom track) |
| Alignm length: | 494 |
| Alignm identity: | 342 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 178, 253 |
| Conread position: | 37-517 |
| Cow position: | chr29:24138028-24137529 (view UCSC Genome Browser custom track) |
| Alignm length: | 505 |
| Alignm identity: | 327 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 15, 99 |
| Conread position: | 38-546 |
| Cow position: | chr29:23374931-23375452 (view UCSC Genome Browser custom track) |
| Alignm length: | 536 |
| Alignm identity: | 365 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 291, 183 |
| Conread position: | 44-498 |
| Cow position: | chr29:1548194-1547732 (view UCSC Genome Browser custom track) |
| Alignm length: | 470 |
| Alignm identity: | 306 |
| Alignm E-value: | 8.99998e-41 |
| Alignm gaps (pig, cow): | 142, 197 |
| Conread position: | 51-179 |
| Cow position: | chr29:28988689-28988816 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 99 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 62-260 |
| Cow position: | chr29:10464337-10464135 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 158, 121 |
| Conread position: | 74-264 |
| Cow position: | chr29:34569068-34569262 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 147, 98 |
| Conread position: | 75-260 |
| Cow position: | chr29:28846769-28846578 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 145 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 145, 0 |
| Conread position: | 77-512 |
| Cow position: | chr29:1346524-1346082 (view UCSC Genome Browser custom track) |
| Alignm length: | 450 |
| Alignm identity: | 289 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 113, 121 |
| Conread position: | 91-508 |
| Cow position: | chr29:17450760-17450321 (view UCSC Genome Browser custom track) |
| Alignm length: | 445 |
| Alignm identity: | 302 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 130, 26 |
| Conread position: | 95-514 |
| Cow position: | chr29:3208352-3208767 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 280 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 177, 61 |
| Conread position: | 119-258 |
| Cow position: | chr29:8430336-8430481 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 96, 0 |
| Conread position: | 329-504 |
| Cow position: | chr29:35329531-35329704 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 130 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 68, 29 |
Show alignments to all cow chromosomes.