Cow genome map
Conread name: | LyN1-MLN01D110012 |
Conread position: | 15-512 |
Cow position: | chr3:45935302-45935809 (view UCSC Genome Browser custom track) |
Alignm length: | 518 |
Alignm identity: | 352 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 188, 147 |
Conread position: | 22-509 |
Cow position: | chr3:26607236-26607744 (view UCSC Genome Browser custom track) |
Alignm length: | 510 |
Alignm identity: | 329 |
Alignm E-value: | 7.00649e-44 |
Alignm gaps (pig, cow): | 194, 281 |
Conread position: | 25-512 |
Cow position: | chr3:19115425-19115918 (view UCSC Genome Browser custom track) |
Alignm length: | 513 |
Alignm identity: | 352 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 302, 5 |
Conread position: | 26-509 |
Cow position: | chr3:81350306-81349814 (view UCSC Genome Browser custom track) |
Alignm length: | 504 |
Alignm identity: | 348 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 190, 265 |
Conread position: | 27-166 |
Cow position: | chr3:16984715-16984578 (view UCSC Genome Browser custom track) |
Alignm length: | 140 |
Alignm identity: | 104 |
Alignm E-value: | 6e-21 |
Alignm gaps (pig, cow): | 88, 0 |
Conread position: | 27-510 |
Cow position: | chr3:13613378-13613866 (view UCSC Genome Browser custom track) |
Alignm length: | 508 |
Alignm identity: | 347 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 40, 47 |
Conread position: | 27-511 |
Cow position: | chr3:55263960-55263469 (view UCSC Genome Browser custom track) |
Alignm length: | 500 |
Alignm identity: | 344 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 5, 265 |
Conread position: | 28-403 |
Cow position: | chr3:22665269-22665653 (view UCSC Genome Browser custom track) |
Alignm length: | 385 |
Alignm identity: | 282 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 131, 0 |
Conread position: | 28-509 |
Cow position: | chr3:6462544-6463008 (view UCSC Genome Browser custom track) |
Alignm length: | 489 |
Alignm identity: | 316 |
Alignm E-value: | 3e-35 |
Alignm gaps (pig, cow): | 9, 19 |
Conread position: | 29-476 |
Cow position: | chr3:64111684-64111232 (view UCSC Genome Browser custom track) |
Alignm length: | 459 |
Alignm identity: | 308 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 196, 293 |
Conread position: | 29-515 |
Cow position: | chr3:15057177-15056679 (view UCSC Genome Browser custom track) |
Alignm length: | 507 |
Alignm identity: | 343 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 28, 130 |
Conread position: | 30-260 |
Cow position: | chr3:60091266-60091030 (view UCSC Genome Browser custom track) |
Alignm length: | 237 |
Alignm identity: | 168 |
Alignm E-value: | 3e-34 |
Alignm gaps (pig, cow): | 185, 0 |
Conread position: | 30-509 |
Cow position: | chr3:69037243-69036753 (view UCSC Genome Browser custom track) |
Alignm length: | 505 |
Alignm identity: | 346 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 299, 189 |
Conread position: | 31-236 |
Cow position: | chr3:2470347-2470145 (view UCSC Genome Browser custom track) |
Alignm length: | 206 |
Alignm identity: | 130 |
Alignm E-value: | 1e-37 |
Alignm gaps (pig, cow): | 87, 0 |
Conread position: | 31-510 |
Cow position: | chr3:27866334-27865843 (view UCSC Genome Browser custom track) |
Alignm length: | 496 |
Alignm identity: | 327 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 36, 282 |
Conread position: | 31-511 |
Cow position: | chr3:64509651-64509151 (view UCSC Genome Browser custom track) |
Alignm length: | 506 |
Alignm identity: | 338 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 186, 301 |
Conread position: | 31-511 |
Cow position: | chr3:78209503-78209978 (view UCSC Genome Browser custom track) |
Alignm length: | 491 |
Alignm identity: | 333 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 244, 190 |
Conread position: | 31-512 |
Cow position: | chr3:52683558-52683065 (view UCSC Genome Browser custom track) |
Alignm length: | 499 |
Alignm identity: | 333 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 183, 301 |
Conread position: | 32-509 |
Cow position: | chr3:7864077-7864561 (view UCSC Genome Browser custom track) |
Alignm length: | 493 |
Alignm identity: | 330 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 183, 264 |
Conread position: | 32-512 |
Cow position: | chr3:14728792-14729281 (view UCSC Genome Browser custom track) |
Alignm length: | 497 |
Alignm identity: | 351 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 185, 266 |
Conread position: | 32-513 |
Cow position: | chr3:5451568-5451083 (view UCSC Genome Browser custom track) |
Alignm length: | 495 |
Alignm identity: | 329 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 183, 102 |
Conread position: | 32-514 |
Cow position: | chr3:1466302-1465810 (view UCSC Genome Browser custom track) |
Alignm length: | 502 |
Alignm identity: | 342 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 183, 37 |
Conread position: | 33-512 |
Cow position: | chr3:34170753-34170272 (view UCSC Genome Browser custom track) |
Alignm length: | 490 |
Alignm identity: | 328 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 242, 174 |
Conread position: | 33-527 |
Cow position: | chr3:24769393-24768901 (view UCSC Genome Browser custom track) |
Alignm length: | 503 |
Alignm identity: | 332 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 233, 85 |
Conread position: | 34-197 |
Cow position: | chr3:19206017-19205856 (view UCSC Genome Browser custom track) |
Alignm length: | 164 |
Alignm identity: | 125 |
Alignm E-value: | 2e-29 |
Alignm gaps (pig, cow): | 12, 0 |
Conread position: | 34-270 |
Cow position: | chr3:32682525-32682764 (view UCSC Genome Browser custom track) |
Alignm length: | 243 |
Alignm identity: | 186 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 182, 159 |
Conread position: | 34-391 |
Cow position: | chr3:30994076-30993721 (view UCSC Genome Browser custom track) |
Alignm length: | 366 |
Alignm identity: | 247 |
Alignm E-value: | 4e-38 |
Alignm gaps (pig, cow): | 181, 108 |
Conread position: | 34-507 |
Cow position: | chr3:29708154-29708641 (view UCSC Genome Browser custom track) |
Alignm length: | 495 |
Alignm identity: | 333 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 181, 15 |
Conread position: | 34-519 |
Cow position: | chr3:5452505-5452014 (view UCSC Genome Browser custom track) |
Alignm length: | 495 |
Alignm identity: | 322 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 186, 253 |
Conread position: | 35-199 |
Cow position: | chr3:10228986-10229150 (view UCSC Genome Browser custom track) |
Alignm length: | 165 |
Alignm identity: | 125 |
Alignm E-value: | 6e-31 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 35-214 |
Cow position: | chr3:30766367-30766544 (view UCSC Genome Browser custom track) |
Alignm length: | 180 |
Alignm identity: | 137 |
Alignm E-value: | 2e-33 |
Alignm gaps (pig, cow): | 14, 0 |
Conread position: | 35-260 |
Cow position: | chr3:78502034-78501803 (view UCSC Genome Browser custom track) |
Alignm length: | 233 |
Alignm identity: | 173 |
Alignm E-value: | 4e-39 |
Alignm gaps (pig, cow): | 122, 130 |
Conread position: | 35-509 |
Cow position: | chr3:25086462-25085983 (view UCSC Genome Browser custom track) |
Alignm length: | 491 |
Alignm identity: | 326 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 181, 145 |
Conread position: | 35-509 |
Cow position: | chr3:45840553-45840071 (view UCSC Genome Browser custom track) |
Alignm length: | 491 |
Alignm identity: | 339 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 185, 126 |
Conread position: | 35-510 |
Cow position: | chr3:45835326-45834840 (view UCSC Genome Browser custom track) |
Alignm length: | 493 |
Alignm identity: | 339 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 180, 289 |
Conread position: | 36-191 |
Cow position: | chr3:19201186-19201345 (view UCSC Genome Browser custom track) |
Alignm length: | 160 |
Alignm identity: | 127 |
Alignm E-value: | 2e-32 |
Alignm gaps (pig, cow): | 123, 0 |
Conread position: | 36-260 |
Cow position: | chr3:6047120-6046887 (view UCSC Genome Browser custom track) |
Alignm length: | 234 |
Alignm identity: | 182 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 31, 0 |
Conread position: | 36-273 |
Cow position: | chr3:11713426-11713184 (view UCSC Genome Browser custom track) |
Alignm length: | 244 |
Alignm identity: | 185 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 177, 83 |
Conread position: | 36-509 |
Cow position: | chr3:7866251-7865768 (view UCSC Genome Browser custom track) |
Alignm length: | 499 |
Alignm identity: | 343 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 293, 185 |
Conread position: | 36-509 |
Cow position: | chr3:10132120-10131633 (view UCSC Genome Browser custom track) |
Alignm length: | 492 |
Alignm identity: | 343 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 179, 22 |
Conread position: | 36-509 |
Cow position: | chr3:26611917-26611438 (view UCSC Genome Browser custom track) |
Alignm length: | 487 |
Alignm identity: | 321 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 179, 157 |
Conread position: | 36-510 |
Cow position: | chr3:42333100-42333574 (view UCSC Genome Browser custom track) |
Alignm length: | 484 |
Alignm identity: | 334 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 230, 55 |
Conread position: | 36-513 |
Cow position: | chr3:51795883-51796375 (view UCSC Genome Browser custom track) |
Alignm length: | 497 |
Alignm identity: | 330 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 120, 467 |
Conread position: | 36-514 |
Cow position: | chr3:25718692-25718209 (view UCSC Genome Browser custom track) |
Alignm length: | 491 |
Alignm identity: | 327 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 179, 82 |
Conread position: | 36-526 |
Cow position: | chr3:8810286-8809788 (view UCSC Genome Browser custom track) |
Alignm length: | 505 |
Alignm identity: | 334 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 179, 77 |
Conread position: | 37-156 |
Cow position: | chr3:2593807-2593684 (view UCSC Genome Browser custom track) |
Alignm length: | 125 |
Alignm identity: | 99 |
Alignm E-value: | 6e-21 |
Alignm gaps (pig, cow): | 42, 73 |
Conread position: | 37-157 |
Cow position: | chr3:5425466-5425586 (view UCSC Genome Browser custom track) |
Alignm length: | 121 |
Alignm identity: | 95 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 37-162 |
Cow position: | chr3:14234850-14234724 (view UCSC Genome Browser custom track) |
Alignm length: | 127 |
Alignm identity: | 97 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 114, 0 |
Conread position: | 37-270 |
Cow position: | chr3:51094439-51094672 (view UCSC Genome Browser custom track) |
Alignm length: | 240 |
Alignm identity: | 166 |
Alignm E-value: | 3e-26 |
Alignm gaps (pig, cow): | 184, 76 |
Conread position: | 37-334 |
Cow position: | chr3:2469852-2470135 (view UCSC Genome Browser custom track) |
Alignm length: | 298 |
Alignm identity: | 222 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 184, 0 |
Conread position: | 37-488 |
Cow position: | chr3:3250634-3250175 (view UCSC Genome Browser custom track) |
Alignm length: | 467 |
Alignm identity: | 302 |
Alignm E-value: | 1e-38 |
Alignm gaps (pig, cow): | 167, 163 |
Conread position: | 37-493 |
Cow position: | chr3:76509539-76509994 (view UCSC Genome Browser custom track) |
Alignm length: | 470 |
Alignm identity: | 317 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 114, 126 |
Conread position: | 37-495 |
Cow position: | chr3:52711128-52711593 (view UCSC Genome Browser custom track) |
Alignm length: | 471 |
Alignm identity: | 320 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 178, 222 |
Conread position: | 37-498 |
Cow position: | chr3:11243956-11243492 (view UCSC Genome Browser custom track) |
Alignm length: | 474 |
Alignm identity: | 315 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 183, 256 |
Conread position: | 37-498 |
Cow position: | chr3:19206636-19206175 (view UCSC Genome Browser custom track) |
Alignm length: | 472 |
Alignm identity: | 315 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 18, 144 |
Conread position: | 37-503 |
Cow position: | chr3:22885273-22885740 (view UCSC Genome Browser custom track) |
Alignm length: | 480 |
Alignm identity: | 330 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 181, 12 |
Conread position: | 37-505 |
Cow position: | chr3:23831014-23830548 (view UCSC Genome Browser custom track) |
Alignm length: | 484 |
Alignm identity: | 319 |
Alignm E-value: | 5e-40 |
Alignm gaps (pig, cow): | 16, 106 |
Conread position: | 37-508 |
Cow position: | chr3:62737581-62737099 (view UCSC Genome Browser custom track) |
Alignm length: | 491 |
Alignm identity: | 337 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 180, 288 |
Conread position: | 37-509 |
Cow position: | chr3:2409880-2409398 (view UCSC Genome Browser custom track) |
Alignm length: | 488 |
Alignm identity: | 320 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 17, 276 |
Conread position: | 37-509 |
Cow position: | chr3:28466463-28466941 (view UCSC Genome Browser custom track) |
Alignm length: | 488 |
Alignm identity: | 328 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 150, 260 |
Conread position: | 37-509 |
Cow position: | chr3:35249030-35249521 (view UCSC Genome Browser custom track) |
Alignm length: | 496 |
Alignm identity: | 322 |
Alignm E-value: | 2e-40 |
Alignm gaps (pig, cow): | 30, 60 |
Conread position: | 37-509 |
Cow position: | chr3:56969061-56969537 (view UCSC Genome Browser custom track) |
Alignm length: | 491 |
Alignm identity: | 335 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 178, 98 |
Conread position: | 37-509 |
Cow position: | chr3:71012549-71012074 (view UCSC Genome Browser custom track) |
Alignm length: | 489 |
Alignm identity: | 322 |
Alignm E-value: | 1.99993e-41 |
Alignm gaps (pig, cow): | 19, 100 |
Conread position: | 37-510 |
Cow position: | chr3:7020389-7020872 (view UCSC Genome Browser custom track) |
Alignm length: | 492 |
Alignm identity: | 343 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 172, 253 |
Conread position: | 37-510 |
Cow position: | chr3:13009271-13009748 (view UCSC Genome Browser custom track) |
Alignm length: | 492 |
Alignm identity: | 340 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 177, 38 |
Conread position: | 37-510 |
Cow position: | chr3:53803112-53802633 (view UCSC Genome Browser custom track) |
Alignm length: | 492 |
Alignm identity: | 332 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 179, 141 |
Conread position: | 37-512 |
Cow position: | chr3:7530718-7530231 (view UCSC Genome Browser custom track) |
Alignm length: | 493 |
Alignm identity: | 322 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 119, 276 |
Conread position: | 37-513 |
Cow position: | chr3:84917759-84917272 (view UCSC Genome Browser custom track) |
Alignm length: | 495 |
Alignm identity: | 328 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 38, 24 |
Conread position: | 37-523 |
Cow position: | chr3:24812523-24812029 (view UCSC Genome Browser custom track) |
Alignm length: | 502 |
Alignm identity: | 340 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 178, 12 |
Conread position: | 38-287 |
Cow position: | chr3:19474864-19474608 (view UCSC Genome Browser custom track) |
Alignm length: | 258 |
Alignm identity: | 191 |
Alignm E-value: | 2.00386e-43 |
Alignm gaps (pig, cow): | 177, 73 |
Conread position: | 38-472 |
Cow position: | chr3:7829544-7829113 (view UCSC Genome Browser custom track) |
Alignm length: | 441 |
Alignm identity: | 281 |
Alignm E-value: | 3e-35 |
Alignm gaps (pig, cow): | 34, 20 |
Conread position: | 38-498 |
Cow position: | chr3:75163897-75163436 (view UCSC Genome Browser custom track) |
Alignm length: | 475 |
Alignm identity: | 316 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 182, 104 |
Conread position: | 38-509 |
Cow position: | chr3:80440797-80441278 (view UCSC Genome Browser custom track) |
Alignm length: | 497 |
Alignm identity: | 350 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 291, 183 |
Conread position: | 39-260 |
Cow position: | chr3:57722886-57722666 (view UCSC Genome Browser custom track) |
Alignm length: | 228 |
Alignm identity: | 174 |
Alignm E-value: | 1e-39 |
Alignm gaps (pig, cow): | 178, 25 |
Conread position: | 39-505 |
Cow position: | chr3:34562625-34562140 (view UCSC Genome Browser custom track) |
Alignm length: | 492 |
Alignm identity: | 331 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 182, 96 |
Conread position: | 40-260 |
Cow position: | chr3:78788757-78788983 (view UCSC Genome Browser custom track) |
Alignm length: | 227 |
Alignm identity: | 176 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 175, 0 |
Conread position: | 43-315 |
Cow position: | chr3:61963826-61963558 (view UCSC Genome Browser custom track) |
Alignm length: | 276 |
Alignm identity: | 205 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 24, 138 |
Conread position: | 44-513 |
Cow position: | chr3:38529541-38530018 (view UCSC Genome Browser custom track) |
Alignm length: | 486 |
Alignm identity: | 337 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 171, 280 |
Conread position: | 47-331 |
Cow position: | chr3:60064443-60064725 (view UCSC Genome Browser custom track) |
Alignm length: | 294 |
Alignm identity: | 215 |
Alignm E-value: | 1e-39 |
Alignm gaps (pig, cow): | 21, 14 |
Conread position: | 47-334 |
Cow position: | chr3:8008932-8008642 (view UCSC Genome Browser custom track) |
Alignm length: | 296 |
Alignm identity: | 221 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 168, 54 |
Conread position: | 53-260 |
Cow position: | chr3:62423879-62423680 (view UCSC Genome Browser custom track) |
Alignm length: | 208 |
Alignm identity: | 155 |
Alignm E-value: | 8e-34 |
Alignm gaps (pig, cow): | 89, 0 |
Conread position: | 58-260 |
Cow position: | chr3:38280424-38280632 (view UCSC Genome Browser custom track) |
Alignm length: | 209 |
Alignm identity: | 162 |
Alignm E-value: | 6.00036e-42 |
Alignm gaps (pig, cow): | 157, 0 |
Conread position: | 61-512 |
Cow position: | chr3:2445803-2446265 (view UCSC Genome Browser custom track) |
Alignm length: | 469 |
Alignm identity: | 315 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 154, 235 |
Conread position: | 72-513 |
Cow position: | chr3:83331264-83331724 (view UCSC Genome Browser custom track) |
Alignm length: | 462 |
Alignm identity: | 295 |
Alignm E-value: | 3e-34 |
Alignm gaps (pig, cow): | 142, 323 |
Conread position: | 75-512 |
Cow position: | chr3:81827504-81827950 (view UCSC Genome Browser custom track) |
Alignm length: | 457 |
Alignm identity: | 304 |
Alignm E-value: | 2e-40 |
Alignm gaps (pig, cow): | 140, 87 |
Conread position: | 119-510 |
Cow position: | chr3:74477171-74476779 (view UCSC Genome Browser custom track) |
Alignm length: | 406 |
Alignm identity: | 269 |
Alignm E-value: | 7e-33 |
Alignm gaps (pig, cow): | 97, 175 |
Conread position: | 138-334 |
Cow position: | chr3:49874158-49873957 (view UCSC Genome Browser custom track) |
Alignm length: | 204 |
Alignm identity: | 150 |
Alignm E-value: | 5e-30 |
Alignm gaps (pig, cow): | 77, 26 |
Conread position: | 367-509 |
Cow position: | chr3:20352825-20352680 (view UCSC Genome Browser custom track) |
Alignm length: | 146 |
Alignm identity: | 115 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 25, 0 |
Show alignments to all cow chromosomes.