Cow genome map
| Conread name: | LyN1-MLN01D110012 |
| Conread position: | 1-260 |
| Cow position: | chr4:10906850-10907113 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 198 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 219, 17 |
| Conread position: | 17-260 |
| Cow position: | chr4:11737566-11737321 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 184 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 15, 132 |
| Conread position: | 18-511 |
| Cow position: | chr4:52121130-52120631 (view UCSC Genome Browser custom track) |
| Alignm length: | 512 |
| Alignm identity: | 327 |
| Alignm E-value: | 9e-37 |
| Alignm gaps (pig, cow): | 37, 12 |
| Conread position: | 28-513 |
| Cow position: | chr4:69177613-69177114 (view UCSC Genome Browser custom track) |
| Alignm length: | 508 |
| Alignm identity: | 346 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 88, 266 |
| Conread position: | 29-511 |
| Cow position: | chr4:20827109-20826623 (view UCSC Genome Browser custom track) |
| Alignm length: | 497 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 192, 37 |
| Conread position: | 29-514 |
| Cow position: | chr4:65584077-65583600 (view UCSC Genome Browser custom track) |
| Alignm length: | 500 |
| Alignm identity: | 343 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 186, 211 |
| Conread position: | 30-258 |
| Cow position: | chr4:34268236-34268002 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 182 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 185, 0 |
| Conread position: | 30-509 |
| Cow position: | chr4:12228970-12228489 (view UCSC Genome Browser custom track) |
| Alignm length: | 499 |
| Alignm identity: | 338 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 185, 111 |
| Conread position: | 30-512 |
| Cow position: | chr4:9263099-9262607 (view UCSC Genome Browser custom track) |
| Alignm length: | 499 |
| Alignm identity: | 338 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 185, 222 |
| Conread position: | 31-498 |
| Cow position: | chr4:14529286-14528811 (view UCSC Genome Browser custom track) |
| Alignm length: | 481 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 184, 301 |
| Conread position: | 31-512 |
| Cow position: | chr4:32835531-32836022 (view UCSC Genome Browser custom track) |
| Alignm length: | 499 |
| Alignm identity: | 344 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 184, 260 |
| Conread position: | 32-511 |
| Cow position: | chr4:6262260-6262749 (view UCSC Genome Browser custom track) |
| Alignm length: | 496 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 129, 25 |
| Conread position: | 32-511 |
| Cow position: | chr4:30044682-30045166 (view UCSC Genome Browser custom track) |
| Alignm length: | 493 |
| Alignm identity: | 329 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 183, 86 |
| Conread position: | 34-512 |
| Cow position: | chr4:48555249-48555733 (view UCSC Genome Browser custom track) |
| Alignm length: | 495 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 181, 84 |
| Conread position: | 34-512 |
| Cow position: | chr4:60736423-60735938 (view UCSC Genome Browser custom track) |
| Alignm length: | 490 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 187, 258 |
| Conread position: | 34-514 |
| Cow position: | chr4:43402517-43402026 (view UCSC Genome Browser custom track) |
| Alignm length: | 497 |
| Alignm identity: | 330 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 181, 298 |
| Conread position: | 35-229 |
| Cow position: | chr4:32189415-32189220 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 156 |
| Alignm E-value: | 7.00649e-45 |
| Alignm gaps (pig, cow): | 192, 0 |
| Conread position: | 35-512 |
| Cow position: | chr4:12564152-12563664 (view UCSC Genome Browser custom track) |
| Alignm length: | 493 |
| Alignm identity: | 338 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 178, 255 |
| Conread position: | 35-514 |
| Cow position: | chr4:18953593-18954083 (view UCSC Genome Browser custom track) |
| Alignm length: | 495 |
| Alignm identity: | 337 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 180, 261 |
| Conread position: | 35-571 |
| Cow position: | chr4:5233742-5234283 (view UCSC Genome Browser custom track) |
| Alignm length: | 553 |
| Alignm identity: | 370 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 180, 118 |
| Conread position: | 36-287 |
| Cow position: | chr4:16738151-16738408 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 193 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 179, 0 |
| Conread position: | 36-334 |
| Cow position: | chr4:32711493-32711806 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 229 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 39, 22 |
| Conread position: | 36-334 |
| Cow position: | chr4:45059034-45059320 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 220 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 43, 78 |
| Conread position: | 36-504 |
| Cow position: | chr4:8195252-8195734 (view UCSC Genome Browser custom track) |
| Alignm length: | 493 |
| Alignm identity: | 323 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 43, 81 |
| Conread position: | 36-509 |
| Cow position: | chr4:10382679-10383163 (view UCSC Genome Browser custom track) |
| Alignm length: | 492 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 179, 257 |
| Conread position: | 36-509 |
| Cow position: | chr4:48842554-48842072 (view UCSC Genome Browser custom track) |
| Alignm length: | 493 |
| Alignm identity: | 341 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 179, 257 |
| Conread position: | 37-155 |
| Cow position: | chr4:5495066-5495184 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 95 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 37-217 |
| Cow position: | chr4:7173808-7173987 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 136 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 76, 24 |
| Conread position: | 37-258 |
| Cow position: | chr4:36162344-36162117 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 179 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 183, 0 |
| Conread position: | 37-260 |
| Cow position: | chr4:16938265-16938488 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 176 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 76 |
| Conread position: | 37-260 |
| Cow position: | chr4:46952551-46952322 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 180 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 178, 0 |
| Conread position: | 37-260 |
| Cow position: | chr4:55322864-55322635 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 178 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 183, 0 |
| Conread position: | 37-287 |
| Cow position: | chr4:17142047-17142305 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 196 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 183, 256 |
| Conread position: | 37-498 |
| Cow position: | chr4:11259438-11259906 (view UCSC Genome Browser custom track) |
| Alignm length: | 480 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 255 |
| Conread position: | 37-508 |
| Cow position: | chr4:13487806-13487344 (view UCSC Genome Browser custom track) |
| Alignm length: | 484 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 235, 175 |
| Conread position: | 37-509 |
| Cow position: | chr4:4717547-4717072 (view UCSC Genome Browser custom track) |
| Alignm length: | 489 |
| Alignm identity: | 323 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 178, 9 |
| Conread position: | 37-509 |
| Cow position: | chr4:14526314-14526797 (view UCSC Genome Browser custom track) |
| Alignm length: | 487 |
| Alignm identity: | 328 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 183, 268 |
| Conread position: | 37-509 |
| Cow position: | chr4:22906854-22907335 (view UCSC Genome Browser custom track) |
| Alignm length: | 489 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 180, 254 |
| Conread position: | 37-509 |
| Cow position: | chr4:31956707-31956225 (view UCSC Genome Browser custom track) |
| Alignm length: | 491 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 183, 216 |
| Conread position: | 37-509 |
| Cow position: | chr4:35044600-35044120 (view UCSC Genome Browser custom track) |
| Alignm length: | 485 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 178, 229 |
| Conread position: | 37-509 |
| Cow position: | chr4:54860456-54860934 (view UCSC Genome Browser custom track) |
| Alignm length: | 489 |
| Alignm identity: | 328 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 178, 254 |
| Conread position: | 37-510 |
| Cow position: | chr4:35239064-35238580 (view UCSC Genome Browser custom track) |
| Alignm length: | 488 |
| Alignm identity: | 330 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 184, 259 |
| Conread position: | 38-192 |
| Cow position: | chr4:67531156-67531310 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 123 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 39-260 |
| Cow position: | chr4:35552054-35552281 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 179 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 39-509 |
| Cow position: | chr4:27763553-27763065 (view UCSC Genome Browser custom track) |
| Alignm length: | 499 |
| Alignm identity: | 329 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 28, 127 |
| Conread position: | 39-509 |
| Cow position: | chr4:30414751-30415223 (view UCSC Genome Browser custom track) |
| Alignm length: | 490 |
| Alignm identity: | 327 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 33, 88 |
| Conread position: | 40-334 |
| Cow position: | chr4:46297480-46297195 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 210 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 181, 0 |
| Conread position: | 43-334 |
| Cow position: | chr4:60136253-60136546 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 223 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 143, 247 |
| Conread position: | 72-509 |
| Cow position: | chr4:5227037-5227483 (view UCSC Genome Browser custom track) |
| Alignm length: | 455 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 119, 223 |
| Conread position: | 122-501 |
| Cow position: | chr4:45560680-45560292 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 262 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 98, 174 |
Show alignments to all cow chromosomes.