Cow genome map
| Conread name: | LyN1-MLN01D110012 |
| Conread position: | 24-526 |
| Cow position: | chr7:16632670-16632144 (view UCSC Genome Browser custom track) |
| Alignm length: | 534 |
| Alignm identity: | 355 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 30, 100 |
| Conread position: | 29-260 |
| Cow position: | chr7:8254391-8254155 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 183 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 186, 181 |
| Conread position: | 29-513 |
| Cow position: | chr7:61215601-61215099 (view UCSC Genome Browser custom track) |
| Alignm length: | 508 |
| Alignm identity: | 346 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 186, 211 |
| Conread position: | 30-511 |
| Cow position: | chr7:30949680-30950170 (view UCSC Genome Browser custom track) |
| Alignm length: | 500 |
| Alignm identity: | 343 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 111, 263 |
| Conread position: | 31-260 |
| Cow position: | chr7:32895842-32896064 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 179 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 173, 0 |
| Conread position: | 31-511 |
| Cow position: | chr7:50562728-50562238 (view UCSC Genome Browser custom track) |
| Alignm length: | 500 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 185, 263 |
| Conread position: | 33-334 |
| Cow position: | chr7:4598319-4598023 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 212 |
| Alignm E-value: | 7.00649e-45 |
| Alignm gaps (pig, cow): | 188, 0 |
| Conread position: | 33-512 |
| Cow position: | chr7:28434295-28433797 (view UCSC Genome Browser custom track) |
| Alignm length: | 506 |
| Alignm identity: | 343 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 261 |
| Conread position: | 34-275 |
| Cow position: | chr7:21993299-21993057 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 196 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 186, 96 |
| Conread position: | 34-311 |
| Cow position: | chr7:10479485-10479766 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 222 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 182, 57 |
| Conread position: | 34-509 |
| Cow position: | chr7:9438136-9437651 (view UCSC Genome Browser custom track) |
| Alignm length: | 497 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 127, 75 |
| Conread position: | 34-512 |
| Cow position: | chr7:27265191-27265680 (view UCSC Genome Browser custom track) |
| Alignm length: | 495 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 181, 298 |
| Conread position: | 34-529 |
| Cow position: | chr7:52433795-52434276 (view UCSC Genome Browser custom track) |
| Alignm length: | 507 |
| Alignm identity: | 335 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 189, 15 |
| Conread position: | 35-203 |
| Cow position: | chr7:37935903-37935739 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 135 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 127, 0 |
| Conread position: | 35-334 |
| Cow position: | chr7:18103606-18103318 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 221 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 215, 172 |
| Conread position: | 35-509 |
| Cow position: | chr7:2411380-2411864 (view UCSC Genome Browser custom track) |
| Alignm length: | 491 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 186, 297 |
| Conread position: | 36-260 |
| Cow position: | chr7:52897461-52897235 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 183 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 184, 82 |
| Conread position: | 36-509 |
| Cow position: | chr7:18109554-18109083 (view UCSC Genome Browser custom track) |
| Alignm length: | 484 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 230, 168 |
| Conread position: | 36-510 |
| Cow position: | chr7:14318940-14319417 (view UCSC Genome Browser custom track) |
| Alignm length: | 492 |
| Alignm identity: | 337 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 185, 255 |
| Conread position: | 37-146 |
| Cow position: | chr7:8769556-8769448 (view UCSC Genome Browser custom track) |
| Alignm length: | 110 |
| Alignm identity: | 88 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 37-189 |
| Cow position: | chr7:14387294-14387446 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 122 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 37-203 |
| Cow position: | chr7:7867308-7867475 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 18, 85 |
| Conread position: | 37-215 |
| Cow position: | chr7:49095354-49095175 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 140 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 37-259 |
| Cow position: | chr7:27259568-27259804 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 177 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 25, 12 |
| Conread position: | 37-260 |
| Cow position: | chr7:32817006-32817235 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 179 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 178, 0 |
| Conread position: | 37-260 |
| Cow position: | chr7:41081233-41081004 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 176 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 178, 0 |
| Conread position: | 37-263 |
| Cow position: | chr7:6010379-6010611 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 180 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 30, 12 |
| Conread position: | 37-266 |
| Cow position: | chr7:1846997-1846762 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 181 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 178, 0 |
| Conread position: | 37-273 |
| Cow position: | chr7:51496997-51496751 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 188 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 18, 120 |
| Conread position: | 37-303 |
| Cow position: | chr7:936038-935768 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 202 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 178, 37 |
| Conread position: | 37-311 |
| Cow position: | chr7:10906239-10906519 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 224 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 178, 0 |
| Conread position: | 37-334 |
| Cow position: | chr7:14861147-14861446 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 117, 272 |
| Conread position: | 37-497 |
| Cow position: | chr7:19655245-19655712 (view UCSC Genome Browser custom track) |
| Alignm length: | 477 |
| Alignm identity: | 330 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 178, 254 |
| Conread position: | 37-498 |
| Cow position: | chr7:1438730-1439198 (view UCSC Genome Browser custom track) |
| Alignm length: | 480 |
| Alignm identity: | 333 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 147 |
| Conread position: | 37-509 |
| Cow position: | chr7:3664692-3664219 (view UCSC Genome Browser custom track) |
| Alignm length: | 491 |
| Alignm identity: | 333 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 124, 81 |
| Conread position: | 37-509 |
| Cow position: | chr7:6375965-6376441 (view UCSC Genome Browser custom track) |
| Alignm length: | 482 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 238, 177 |
| Conread position: | 37-509 |
| Cow position: | chr7:10726732-10726251 (view UCSC Genome Browser custom track) |
| Alignm length: | 494 |
| Alignm identity: | 337 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 178, 116 |
| Conread position: | 37-509 |
| Cow position: | chr7:37784050-37783571 (view UCSC Genome Browser custom track) |
| Alignm length: | 491 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 56 |
| Conread position: | 37-509 |
| Cow position: | chr7:43355398-43354913 (view UCSC Genome Browser custom track) |
| Alignm length: | 494 |
| Alignm identity: | 327 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 18, 90 |
| Conread position: | 37-509 |
| Cow position: | chr7:66941286-66941765 (view UCSC Genome Browser custom track) |
| Alignm length: | 488 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 178, 128 |
| Conread position: | 37-510 |
| Cow position: | chr7:8333937-8333455 (view UCSC Genome Browser custom track) |
| Alignm length: | 492 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 150, 265 |
| Conread position: | 37-510 |
| Cow position: | chr7:40523415-40522932 (view UCSC Genome Browser custom track) |
| Alignm length: | 490 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 178, 104 |
| Conread position: | 37-510 |
| Cow position: | chr7:41789766-41789285 (view UCSC Genome Browser custom track) |
| Alignm length: | 489 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 178, 138 |
| Conread position: | 37-510 |
| Cow position: | chr7:46244452-46243967 (view UCSC Genome Browser custom track) |
| Alignm length: | 493 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 180, 260 |
| Conread position: | 37-510 |
| Cow position: | chr7:65172585-65172112 (view UCSC Genome Browser custom track) |
| Alignm length: | 491 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 178, 60 |
| Conread position: | 37-529 |
| Cow position: | chr7:40498211-40497704 (view UCSC Genome Browser custom track) |
| Alignm length: | 513 |
| Alignm identity: | 348 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 178, 88 |
| Conread position: | 38-260 |
| Cow position: | chr7:16649232-16649458 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 172 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 29, 156 |
| Conread position: | 38-406 |
| Cow position: | chr7:50806138-50805759 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 282 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 56, 128 |
| Conread position: | 38-509 |
| Cow position: | chr7:63711602-63711120 (view UCSC Genome Browser custom track) |
| Alignm length: | 488 |
| Alignm identity: | 337 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 177, 202 |
| Conread position: | 39-260 |
| Cow position: | chr7:13840572-13840792 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 172 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 28, 176 |
| Conread position: | 39-396 |
| Cow position: | chr7:42905883-42906244 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 252 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 174, 253 |
| Conread position: | 39-509 |
| Cow position: | chr7:56929584-56930065 (view UCSC Genome Browser custom track) |
| Alignm length: | 496 |
| Alignm identity: | 344 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 291, 182 |
| Conread position: | 43-525 |
| Cow position: | chr7:3872492-3872983 (view UCSC Genome Browser custom track) |
| Alignm length: | 502 |
| Alignm identity: | 341 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 70 |
| Conread position: | 45-504 |
| Cow position: | chr7:5993259-5993725 (view UCSC Genome Browser custom track) |
| Alignm length: | 479 |
| Alignm identity: | 314 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 22, 42 |
| Conread position: | 49-513 |
| Cow position: | chr7:13419787-13420260 (view UCSC Genome Browser custom track) |
| Alignm length: | 482 |
| Alignm identity: | 333 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 161, 241 |
| Conread position: | 54-509 |
| Cow position: | chr7:7870807-7871271 (view UCSC Genome Browser custom track) |
| Alignm length: | 472 |
| Alignm identity: | 319 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 65 |
| Conread position: | 56-334 |
| Cow position: | chr7:2992978-2993241 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 196 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 16, 66 |
| Conread position: | 64-514 |
| Cow position: | chr7:61968943-61969397 (view UCSC Genome Browser custom track) |
| Alignm length: | 467 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 151, 129 |
| Conread position: | 74-260 |
| Cow position: | chr7:21992252-21992060 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 141, 0 |
| Conread position: | 80-435 |
| Cow position: | chr7:40542467-40542107 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 251 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 133, 246 |
| Conread position: | 86-509 |
| Cow position: | chr7:19665297-19665729 (view UCSC Genome Browser custom track) |
| Alignm length: | 440 |
| Alignm identity: | 293 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 134, 75 |
| Conread position: | 105-510 |
| Cow position: | chr7:3657568-3657151 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 274 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 56, 228 |
| Conread position: | 123-268 |
| Cow position: | chr7:48004640-48004497 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 143, 97 |
| Conread position: | 128-526 |
| Cow position: | chr7:16631267-16630845 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 276 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 87, 113 |
| Conread position: | 362-509 |
| Cow position: | chr7:10479848-10479999 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 363-507 |
| Cow position: | chr7:14861511-14861654 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 117 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 43, 25 |
Show alignments to all cow chromosomes.