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Cow genome map

           
Conread name:
           
LyN1-MLN01D120052
        

               
Conread position:
               
327-599
               

               
Cow position:
               
chr17:28539823-28540091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
5, 68
               

               
Conread position:
               
328-540
               

               
Cow position:
               
chr17:2079549-2079763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
40, 62
               

               
Conread position:
               
331-578
               

               
Cow position:
               
chr17:29472267-29472507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
38, 97
               

               
Conread position:
               
331-595
               

               
Cow position:
               
chr17:36331174-36330900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
28, 51
               

               
Conread position:
               
331-596
               

               
Cow position:
               
chr17:11172823-11172557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
28, 78
               

               
Conread position:
               
331-599
               

               
Cow position:
               
chr17:11102002-11101742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
28, 97
               

               
Conread position:
               
331-599
               

               
Cow position:
               
chr17:13143898-13143627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
28, 226
               

               
Conread position:
               
332-552
               

               
Cow position:
               
chr17:39012515-39012743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
84, 15
               

               
Conread position:
               
349-545
               

               
Cow position:
               
chr17:24973761-24973960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
349-545
               

               
Cow position:
               
chr17:31481235-31481030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
10, 188
               

               
Conread position:
               
349-551
               

               
Cow position:
               
chr17:18494705-18494500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
349-576
               

               
Cow position:
               
chr17:38614766-38614998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
10, 82
               

               
Conread position:
               
349-584
               

               
Cow position:
               
chr17:32950082-32950321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
20, 226
               

               
Conread position:
               
349-596
               

               
Cow position:
               
chr17:21115138-21114896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
10, 55
               

               
Conread position:
               
349-599
               

               
Cow position:
               
chr17:7697866-7698112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
72, 17
               

               
Conread position:
               
352-599
               

               
Cow position:
               
chr17:25901011-25901261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 14
               

               
Conread position:
               
357-599
               

               
Cow position:
               
chr17:12590984-12591230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 9
               

               
Conread position:
               
366-574
               

               
Cow position:
               
chr17:979325-979123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
105, 55
               

               
Conread position:
               
366-598
               

               
Cow position:
               
chr17:25097290-25097522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
37, 174
               

               
Conread position:
               
366-599
               

               
Cow position:
               
chr17:15340909-15340693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
189, 47
               

               
Conread position:
               
367-519
               

               
Cow position:
               
chr17:27142585-27142742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
367-526
               

               
Cow position:
               
chr17:1328142-1327981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
53, 118
               

               
Conread position:
               
367-528
               

               
Cow position:
               
chr17:27667365-27667196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
367-535
               

               
Cow position:
               
chr17:10446745-10446917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
54, 103
               

               
Conread position:
               
367-535
               

               
Cow position:
               
chr17:21419261-21419435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
367-536
               

               
Cow position:
               
chr17:32651445-32651619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
367-543
               

               
Cow position:
               
chr17:21017623-21017803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
54, 110
               

               
Conread position:
               
367-545
               

               
Cow position:
               
chr17:20083683-20083511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
99, 58
               

               
Conread position:
               
367-545
               

               
Cow position:
               
chr17:37163698-37163512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
61, 125
               

               
Conread position:
               
367-546
               

               
Cow position:
               
chr17:27819129-27819312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
54, 41
               

               
Conread position:
               
367-550
               

               
Cow position:
               
chr17:9117472-9117662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
367-553
               

               
Cow position:
               
chr17:16895465-16895288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
60, 22
               

               
Conread position:
               
367-553
               

               
Cow position:
               
chr17:20234056-20234244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
54, 30
               

               
Conread position:
               
367-553
               

               
Cow position:
               
chr17:26084863-26085050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
64, 179
               

               
Conread position:
               
367-555
               

               
Cow position:
               
chr17:5380796-5380989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
54, 14
               

               
Conread position:
               
367-555
               

               
Cow position:
               
chr17:29292538-29292347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
62, 90
               

               
Conread position:
               
367-557
               

               
Cow position:
               
chr17:25755613-25755814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
367-558
               

               
Cow position:
               
chr17:3442839-3442648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
63, 151
               

               
Conread position:
               
367-558
               

               
Cow position:
               
chr17:24553833-24554026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
54, 128
               

               
Conread position:
               
367-560
               

               
Cow position:
               
chr17:17951072-17951265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
61, 121
               

               
Conread position:
               
367-561
               

               
Cow position:
               
chr17:24490350-24490551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
61, 190
               

               
Conread position:
               
367-562
               

               
Cow position:
               
chr17:18495681-18495496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
367-569
               

               
Cow position:
               
chr17:33999215-33999014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
63, 103
               

               
Conread position:
               
367-569
               

               
Cow position:
               
chr17:35990925-35991134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
367-574
               

               
Cow position:
               
chr17:24149006-24149220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
54, 196
               

               
Conread position:
               
367-575
               

               
Cow position:
               
chr17:4721316-4721531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
70, 41
               

               
Conread position:
               
367-576
               

               
Cow position:
               
chr17:10528912-10528690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
367-576
               

               
Cow position:
               
chr17:11618409-11618626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
54, 87
               

               
Conread position:
               
367-576
               

               
Cow position:
               
chr17:12108632-12108842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
54, 32
               

               
Conread position:
               
367-576
               

               
Cow position:
               
chr17:25189108-25189327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
53, 187
               

               
Conread position:
               
367-576
               

               
Cow position:
               
chr17:25541984-25541779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
63, 103
               

               
Conread position:
               
367-576
               

               
Cow position:
               
chr17:42347392-42347186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
171, 63
               

               
Conread position:
               
367-578
               

               
Cow position:
               
chr17:4436402-4436191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 83
               

               
Conread position:
               
367-579
               

               
Cow position:
               
chr17:21312976-21312768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
171, 63
               

               
Conread position:
               
367-582
               

               
Cow position:
               
chr17:5896082-5895866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
59, 126
               

               
Conread position:
               
367-582
               

               
Cow position:
               
chr17:20835422-20835639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
54, 168
               

               
Conread position:
               
367-583
               

               
Cow position:
               
chr17:33926296-33926078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
62, 48
               

               
Conread position:
               
367-584
               

               
Cow position:
               
chr17:8837120-8836900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
367-584
               

               
Cow position:
               
chr17:21031614-21031833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
63, 48
               

               
Conread position:
               
367-584
               

               
Cow position:
               
chr17:41029782-41029997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
63, 183
               

               
Conread position:
               
367-592
               

               
Cow position:
               
chr17:1295742-1295517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
63, 184
               

               
Conread position:
               
367-592
               

               
Cow position:
               
chr17:24580471-24580240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
54, 176
               

               
Conread position:
               
367-593
               

               
Cow position:
               
chr17:3577367-3577594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
54, 148
               

               
Conread position:
               
367-593
               

               
Cow position:
               
chr17:5224232-5224457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
87, 31
               

               
Conread position:
               
367-593
               

               
Cow position:
               
chr17:8544135-8544359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
63, 172
               

               
Conread position:
               
367-593
               

               
Cow position:
               
chr17:9911592-9911815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
19, 124
               

               
Conread position:
               
367-593
               

               
Cow position:
               
chr17:10459107-10458881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
63, 50
               

               
Conread position:
               
367-593
               

               
Cow position:
               
chr17:13922304-13922536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
52, 193
               

               
Conread position:
               
367-593
               

               
Cow position:
               
chr17:20780339-20780564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
54, 183
               

               
Conread position:
               
367-593
               

               
Cow position:
               
chr17:20848359-20848578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
104, 58
               

               
Conread position:
               
367-596
               

               
Cow position:
               
chr17:1063018-1063234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
367-596
               

               
Cow position:
               
chr17:1526529-1526293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
68, 60
               

               
Conread position:
               
367-596
               

               
Cow position:
               
chr17:8279880-8279649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
62, 201
               

               
Conread position:
               
367-596
               

               
Cow position:
               
chr17:10271320-10271554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
53, 175
               

               
Conread position:
               
367-596
               

               
Cow position:
               
chr17:11156664-11156435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
54, 153
               

               
Conread position:
               
367-596
               

               
Cow position:
               
chr17:12059262-12059034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
169, 63
               

               
Conread position:
               
367-596
               

               
Cow position:
               
chr17:18824619-18824849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
63, 123
               

               
Conread position:
               
367-596
               

               
Cow position:
               
chr17:20157444-20157665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
63, 44
               

               
Conread position:
               
367-596
               

               
Cow position:
               
chr17:24773512-24773750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
59, 103
               

               
Conread position:
               
367-596
               

               
Cow position:
               
chr17:28285199-28284970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
35, 64
               

               
Conread position:
               
367-596
               

               
Cow position:
               
chr17:32471965-32471723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
367-596
               

               
Cow position:
               
chr17:38832871-38833101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
70, 178
               

               
Conread position:
               
367-596
               

               
Cow position:
               
chr17:40421497-40421729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
53, 95
               

               
Conread position:
               
367-597
               

               
Cow position:
               
chr17:26764842-26765077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
52, 165
               

               
Conread position:
               
367-599
               

               
Cow position:
               
chr17:908575-908801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 89
               

               
Conread position:
               
367-599
               

               
Cow position:
               
chr17:923707-923940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
94, 70
               

               
Conread position:
               
367-599
               

               
Cow position:
               
chr17:1493326-1493088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
54, 11
               

               
Conread position:
               
367-599
               

               
Cow position:
               
chr17:3781874-3782108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 142
               

               
Conread position:
               
367-599
               

               
Cow position:
               
chr17:4601719-4601485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
54, 152
               

               
Conread position:
               
367-599
               

               
Cow position:
               
chr17:5423243-5423008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 13
               

               
Conread position:
               
367-599
               

               
Cow position:
               
chr17:8690611-8690380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
63, 19
               

               
Conread position:
               
367-599
               

               
Cow position:
               
chr17:9778080-9778304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
63, 45
               

               
Conread position:
               
367-599
               

               
Cow position:
               
chr17:11216054-11215827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
171, 44
               

               
Conread position:
               
367-599
               

               
Cow position:
               
chr17:12447570-12447340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
367-599
               

               
Cow position:
               
chr17:18860890-18860660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
63, 77
               

               
Conread position:
               
367-599
               

               
Cow position:
               
chr17:20839732-20839505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
64, 173
               

               
Conread position:
               
367-599
               

               
Cow position:
               
chr17:21293216-21292981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
21, 73
               

               
Conread position:
               
367-599
               

               
Cow position:
               
chr17:24549998-24550238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
22, 192
               

               
Conread position:
               
367-599
               

               
Cow position:
               
chr17:24587447-24587685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
367-599
               

               
Cow position:
               
chr17:24824081-24824303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 70
               

               
Conread position:
               
367-599
               

               
Cow position:
               
chr17:25128520-25128292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
54, 11
               

               
Conread position:
               
367-599
               

               
Cow position:
               
chr17:25611922-25612151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
58, 64
               

               
Conread position:
               
367-599
               

               
Cow position:
               
chr17:27429407-27429640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
54, 115
               

               
Conread position:
               
367-599
               

               
Cow position:
               
chr17:30665101-30665333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
100, 60
               

               
Conread position:
               
367-599
               

               
Cow position:
               
chr17:32273855-32273626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
204, 41
               

               
Conread position:
               
367-599
               

               
Cow position:
               
chr17:32419289-32419055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
56, 155
               

               
Conread position:
               
367-599
               

               
Cow position:
               
chr17:32989321-32989537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
367-599
               

               
Cow position:
               
chr17:32993785-32993563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
367-599
               

               
Cow position:
               
chr17:38646893-38647122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
170, 60
               

               
Conread position:
               
367-601
               

               
Cow position:
               
chr17:4225662-4225436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
367-601
               

               
Cow position:
               
chr17:18109257-18109021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
367-601
               

               
Cow position:
               
chr17:21004002-21003763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
367-601
               

               
Cow position:
               
chr17:33288825-33288594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
63, 109
               

               
Conread position:
               
367-602
               

               
Cow position:
               
chr17:26230768-26231018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
54, 165
               

               
Conread position:
               
367-603
               

               
Cow position:
               
chr17:11664762-11664520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 127
               

               
Conread position:
               
367-603
               

               
Cow position:
               
chr17:21335869-21335627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
367-604
               

               
Cow position:
               
chr17:1061233-1060991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
54, 24
               

               
Conread position:
               
367-615
               

               
Cow position:
               
chr17:24787192-24786946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
54, 102
               

               
Conread position:
               
367-617
               

               
Cow position:
               
chr17:27765110-27765351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
62, 44
               

               
Conread position:
               
368-557
               

               
Cow position:
               
chr17:25590406-25590214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
368-594
               

               
Cow position:
               
chr17:20993209-20992981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 40
               

               
Conread position:
               
368-599
               

               
Cow position:
               
chr17:12536638-12536404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 171
               

               
Conread position:
               
368-599
               

               
Cow position:
               
chr17:40289174-40288939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
23, 167
               

               
Conread position:
               
369-519
               

               
Cow position:
               
chr17:3182754-3182602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
369-519
               

               
Cow position:
               
chr17:3498833-3498681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
28, 62
               

               
Conread position:
               
369-527
               

               
Cow position:
               
chr17:25168141-25168309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
369-547
               

               
Cow position:
               
chr17:4606798-4606967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
369-548
               

               
Cow position:
               
chr17:5041845-5041670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
369-558
               

               
Cow position:
               
chr17:34079267-34079081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
100, 58
               

               
Conread position:
               
369-574
               

               
Cow position:
               
chr17:21434898-21434690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
52, 102
               

               
Conread position:
               
369-578
               

               
Cow position:
               
chr17:9697870-9697661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
52, 7
               

               
Conread position:
               
369-596
               

               
Cow position:
               
chr17:9746349-9746574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
61, 68
               

               
Conread position:
               
369-596
               

               
Cow position:
               
chr17:14848692-14848483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
169, 56
               

               
Conread position:
               
369-599
               

               
Cow position:
               
chr17:9565140-9565368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
61, 138
               

               
Conread position:
               
370-560
               

               
Cow position:
               
chr17:30204488-30204680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
61, 168
               

               
Conread position:
               
371-518
               

               
Cow position:
               
chr17:5398603-5398451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
371-578
               

               
Cow position:
               
chr17:32027629-32027413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
50, 193
               

               
Conread position:
               
371-601
               

               
Cow position:
               
chr17:1783776-1783541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
50, 134
               

               
Conread position:
               
372-551
               

               
Cow position:
               
chr17:38276525-38276701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
116, 53
               

               
Conread position:
               
372-576
               

               
Cow position:
               
chr17:21918040-21917834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
94, 55
               

               
Conread position:
               
372-576
               

               
Cow position:
               
chr17:25141294-25141490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
58, 36
               

               
Conread position:
               
372-584
               

               
Cow position:
               
chr17:38363140-38362939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
165, 47
               

               
Conread position:
               
372-593
               

               
Cow position:
               
chr17:27305992-27306215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
63, 55
               

               
Conread position:
               
372-599
               

               
Cow position:
               
chr17:5767748-5767968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
58, 136
               

               
Conread position:
               
372-599
               

               
Cow position:
               
chr17:10510828-10510596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
372-599
               

               
Cow position:
               
chr17:17683064-17682843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
99, 55
               

               
Conread position:
               
372-599
               

               
Cow position:
               
chr17:21243953-21243726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
49, 122
               

               
Conread position:
               
372-599
               

               
Cow position:
               
chr17:23246044-23246269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
47, 70
               

               
Conread position:
               
372-599
               

               
Cow position:
               
chr17:24883734-24883510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
41, 95
               

               
Conread position:
               
373-533
               

               
Cow position:
               
chr17:23063547-23063712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
374-557
               

               
Cow position:
               
chr17:37775957-37776139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
63, 53
               

               
Conread position:
               
374-557
               

               
Cow position:
               
chr17:37778781-37778599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
63, 53
               

               
Conread position:
               
374-570
               

               
Cow position:
               
chr17:7760627-7760437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
39, 57
               

               
Conread position:
               
374-593
               

               
Cow position:
               
chr17:25999952-26000176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
374-596
               

               
Cow position:
               
chr17:21959847-21959630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
57, 37
               

               
Conread position:
               
376-548
               

               
Cow position:
               
chr17:27058715-27058543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
53, 71
               

               
Conread position:
               
376-596
               

               
Cow position:
               
chr17:1562936-1562722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
49, 149
               

               
Conread position:
               
376-599
               

               
Cow position:
               
chr17:7142702-7142922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
54, 147
               

               
Conread position:
               
376-599
               

               
Cow position:
               
chr17:21298062-21298293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
54, 207
               

               
Conread position:
               
377-519
               

               
Cow position:
               
chr17:24876977-24877125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
377-596
               

               
Cow position:
               
chr17:1353235-1353455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
92, 53
               

               
Conread position:
               
379-543
               

               
Cow position:
               
chr17:38613087-38613254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
51, 86
               

               
Conread position:
               
379-599
               

               
Cow position:
               
chr17:13244190-13243984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
380-593
               

               
Cow position:
               
chr17:14762277-14762067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
50, 86
               

               
Conread position:
               
381-599
               

               
Cow position:
               
chr17:18146025-18146246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
48, 176
               

               
Conread position:
               
383-596
               

               
Cow position:
               
chr17:39736030-39736234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
158, 42
               

               
Conread position:
               
384-601
               

               
Cow position:
               
chr17:31037534-31037314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
386-549
               

               
Cow position:
               
chr17:31701285-31701454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
41, 157
               

               
Conread position:
               
386-593
               

               
Cow position:
               
chr17:267736-267530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
45, 25
               

               
Conread position:
               
387-579
               

               
Cow position:
               
chr17:5382137-5381953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
43, 56
               

               
Conread position:
               
390-599
               

               
Cow position:
               
chr17:14003669-14003886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
396-599
               

               
Cow position:
               
chr17:33271829-33271618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
34, 44
               

               
Conread position:
               
400-599
               

               
Cow position:
               
chr17:11832258-11832054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
16, 123
               

               
Conread position:
               
401-576
               

               
Cow position:
               
chr17:33411158-33410977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
29, 13
               

               
Conread position:
               
405-578
               

               
Cow position:
               
chr17:14060909-14060732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
407-593
               

               
Cow position:
               
chr17:25122537-25122353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
65, 20
               

               
Conread position:
               
408-599
               

               
Cow position:
               
chr17:17410158-17410354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
5, 152
               

               
Conread position:
               
409-558
               

               
Cow position:
               
chr17:6848676-6848827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
21, 58
               

               
Conread position:
               
411-596
               

               
Cow position:
               
chr17:32138541-32138366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
19, 29
               

               
Conread position:
               
412-584
               

               
Cow position:
               
chr17:39857267-39857436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
19, 111
               

               
Conread position:
               
412-599
               

               
Cow position:
               
chr17:32348948-32349132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
17, 54
               

               
Conread position:
               
417-593
               

               
Cow position:
               
chr17:33658187-33658013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
119, 12
               

               
Conread position:
               
417-597
               

               
Cow position:
               
chr17:23517062-23516883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
125, 0
               

               
Conread position:
               
420-599
               

               
Cow position:
               
chr17:31856545-31856734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
421-599
               

               
Cow position:
               
chr17:25616145-25616311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
422-596
               

               
Cow position:
               
chr17:7654568-7654394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
114, 15
               

               
Conread position:
               
423-599
               

               
Cow position:
               
chr17:23563904-23563735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
8, 25
               

               
Conread position:
               
427-525
               

               
Cow position:
               
chr17:7136872-7136971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
100
               

               
Alignm identity:
               
84
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
427-572
               

               
Cow position:
               
chr17:14883194-14883048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
427-599
               

               
Cow position:
               
chr17:1040636-1040806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
122, 0
               

               
Conread position:
               
430-552
               

               
Cow position:
               
chr17:35339022-35338900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
123
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
436-599
               

               
Cow position:
               
chr17:21325232-21325393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
439-593
               

               
Cow position:
               
chr17:25514221-25514068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
122, 0
               

               
Conread position:
               
442-593
               

               
Cow position:
               
chr17:27203139-27202991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
29, 97
               

               
Conread position:
               
445-579
               

               
Cow position:
               
chr17:21489716-21489582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
27, 111
               

               
Conread position:
               
455-596
               

               
Cow position:
               
chr17:11368932-11368791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
81, 38
               

               
Conread position:
               
470-595
               

               
Cow position:
               
chr17:40638883-40639004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
472-596
               

               
Cow position:
               
chr17:21478987-21478861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
494-601
               

               
Cow position:
               
chr17:25800925-25800819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
108
               

               
Alignm identity:
               
90
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
50, 0
               
Show alignments to all cow chromosomes.