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Cow genome map

           
Conread name:
           
LyN1-MLN01D120052
        

               
Conread position:
               
321-545
               

               
Cow position:
               
chr5:45705814-45706039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
38, 168
               

               
Conread position:
               
321-545
               

               
Cow position:
               
chr5:71158497-71158267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
47, 172
               

               
Conread position:
               
324-593
               

               
Cow position:
               
chr5:52165413-52165137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
8, 26
               

               
Conread position:
               
331-508
               

               
Cow position:
               
chr5:24642945-24642770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
28, 109
               

               
Conread position:
               
331-551
               

               
Cow position:
               
chr5:1276698-1276465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
38, 18
               

               
Conread position:
               
331-561
               

               
Cow position:
               
chr5:43858651-43858423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
28, 62
               

               
Conread position:
               
331-562
               

               
Cow position:
               
chr5:45226047-45225812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
28, 56
               

               
Conread position:
               
331-576
               

               
Cow position:
               
chr5:3281608-3281858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
28, 56
               

               
Conread position:
               
331-576
               

               
Cow position:
               
chr5:28926408-28926157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
90, 35
               

               
Conread position:
               
331-578
               

               
Cow position:
               
chr5:1766568-1766324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
20, 39
               

               
Conread position:
               
331-579
               

               
Cow position:
               
chr5:16508873-16509126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
28, 18
               

               
Conread position:
               
331-593
               

               
Cow position:
               
chr5:27103011-27102754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
28, 91
               

               
Conread position:
               
331-594
               

               
Cow position:
               
chr5:37814400-37814667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
28, 110
               

               
Conread position:
               
331-595
               

               
Cow position:
               
chr5:11229897-11229630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
28, 215
               

               
Conread position:
               
331-596
               

               
Cow position:
               
chr5:4032212-4031946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
38, 73
               

               
Conread position:
               
331-614
               

               
Cow position:
               
chr5:26377890-26377608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
28, 137
               

               
Conread position:
               
333-528
               

               
Cow position:
               
chr5:33467262-33467066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
35, 95
               

               
Conread position:
               
349-535
               

               
Cow position:
               
chr5:6986953-6987146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
20, 11
               

               
Conread position:
               
349-540
               

               
Cow position:
               
chr5:39094348-39094543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
10, 54
               

               
Conread position:
               
349-544
               

               
Cow position:
               
chr5:72891954-72891765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
20, 44
               

               
Conread position:
               
349-562
               

               
Cow position:
               
chr5:40928178-40927974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
10, 19
               

               
Conread position:
               
349-575
               

               
Cow position:
               
chr5:8163026-8162796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
64, 17
               

               
Conread position:
               
349-576
               

               
Cow position:
               
chr5:47313268-47313497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
10, 51
               

               
Conread position:
               
349-588
               

               
Cow position:
               
chr5:46122556-46122318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
10, 62
               

               
Conread position:
               
349-595
               

               
Cow position:
               
chr5:34638680-34638926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 77
               

               
Conread position:
               
349-599
               

               
Cow position:
               
chr5:8821217-8820966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
10, 139
               

               
Conread position:
               
349-599
               

               
Cow position:
               
chr5:30276486-30276736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
10, 198
               

               
Conread position:
               
349-599
               

               
Cow position:
               
chr5:30302693-30302940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
197, 17
               

               
Conread position:
               
349-599
               

               
Cow position:
               
chr5:34300721-34300965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
10, 50
               

               
Conread position:
               
349-599
               

               
Cow position:
               
chr5:58144809-58144555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
10, 211
               

               
Conread position:
               
349-599
               

               
Cow position:
               
chr5:62142465-62142722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 147
               

               
Conread position:
               
349-599
               

               
Cow position:
               
chr5:74643867-74643631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
10, 51
               

               
Conread position:
               
353-572
               

               
Cow position:
               
chr5:52667826-52668049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
27, 47
               

               
Conread position:
               
360-593
               

               
Cow position:
               
chr5:41452859-41452625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
61, 9
               

               
Conread position:
               
360-601
               

               
Cow position:
               
chr5:56070660-56070907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 7
               

               
Conread position:
               
362-599
               

               
Cow position:
               
chr5:21964097-21964335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
15, 57
               

               
Conread position:
               
366-551
               

               
Cow position:
               
chr5:59326016-59325834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
106, 59
               

               
Conread position:
               
366-591
               

               
Cow position:
               
chr5:17644843-17644616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
64, 190
               

               
Conread position:
               
366-599
               

               
Cow position:
               
chr5:30487057-30487288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
62, 16
               

               
Conread position:
               
366-599
               

               
Cow position:
               
chr5:69337640-69337866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
53, 76
               

               
Conread position:
               
367-509
               

               
Cow position:
               
chr5:50729309-50729457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
367-513
               

               
Cow position:
               
chr5:75828922-75828775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
367-518
               

               
Cow position:
               
chr5:63917597-63917444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
367-520
               

               
Cow position:
               
chr5:44054224-44054067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
54, 87
               

               
Conread position:
               
367-533
               

               
Cow position:
               
chr5:4322224-4322390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
54, 103
               

               
Conread position:
               
367-545
               

               
Cow position:
               
chr5:31434079-31434255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
59, 143
               

               
Conread position:
               
367-545
               

               
Cow position:
               
chr5:33661668-33661850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
54, 125
               

               
Conread position:
               
367-545
               

               
Cow position:
               
chr5:56028717-56028535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
54, 147
               

               
Conread position:
               
367-546
               

               
Cow position:
               
chr5:6683534-6683363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
120, 28
               

               
Conread position:
               
367-546
               

               
Cow position:
               
chr5:26099557-26099384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
75, 63
               

               
Conread position:
               
367-546
               

               
Cow position:
               
chr5:56433612-56433799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
23, 15
               

               
Conread position:
               
367-546
               

               
Cow position:
               
chr5:62027133-62026953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
103, 63
               

               
Conread position:
               
367-549
               

               
Cow position:
               
chr5:44583305-44583130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
174, 44
               

               
Conread position:
               
367-550
               

               
Cow position:
               
chr5:58855917-58856102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
367-550
               

               
Cow position:
               
chr5:59298145-59297959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
59, 123
               

               
Conread position:
               
367-550
               

               
Cow position:
               
chr5:73252910-73253089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
63, 44
               

               
Conread position:
               
367-551
               

               
Cow position:
               
chr5:35145166-35145349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
160, 63
               

               
Conread position:
               
367-552
               

               
Cow position:
               
chr5:1678213-1678396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
99, 44
               

               
Conread position:
               
367-553
               

               
Cow position:
               
chr5:27419907-27419730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
117, 0
               

               
Conread position:
               
367-556
               

               
Cow position:
               
chr5:61488299-61488101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
367-559
               

               
Cow position:
               
chr5:74019957-74019764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
64, 11
               

               
Conread position:
               
367-561
               

               
Cow position:
               
chr5:40357056-40356856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
52, 23
               

               
Conread position:
               
367-564
               

               
Cow position:
               
chr5:28330518-28330315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
99, 66
               

               
Conread position:
               
367-566
               

               
Cow position:
               
chr5:45940792-45940600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
64, 17
               

               
Conread position:
               
367-568
               

               
Cow position:
               
chr5:31469771-31469566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
367-569
               

               
Cow position:
               
chr5:49558981-49559183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
63, 164
               

               
Conread position:
               
367-573
               

               
Cow position:
               
chr5:16184903-16185108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
63, 46
               

               
Conread position:
               
367-573
               

               
Cow position:
               
chr5:26990207-26990416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
29, 67
               

               
Conread position:
               
367-573
               

               
Cow position:
               
chr5:34288656-34288448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
54, 29
               

               
Conread position:
               
367-574
               

               
Cow position:
               
chr5:45409139-45409344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
9, 58
               

               
Conread position:
               
367-574
               

               
Cow position:
               
chr5:60715541-60715342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
91, 63
               

               
Conread position:
               
367-575
               

               
Cow position:
               
chr5:42064016-42064227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
96, 41
               

               
Conread position:
               
367-575
               

               
Cow position:
               
chr5:72150065-72150272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
63, 44
               

               
Conread position:
               
367-576
               

               
Cow position:
               
chr5:9859905-9859688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
62, 130
               

               
Conread position:
               
367-576
               

               
Cow position:
               
chr5:10261425-10261210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
54, 106
               

               
Conread position:
               
367-576
               

               
Cow position:
               
chr5:28247990-28248196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
61, 121
               

               
Conread position:
               
367-576
               

               
Cow position:
               
chr5:44049516-44049725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
98, 52
               

               
Conread position:
               
367-576
               

               
Cow position:
               
chr5:48154659-48154449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
59, 29
               

               
Conread position:
               
367-576
               

               
Cow position:
               
chr5:59082382-59082171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
54, 102
               

               
Conread position:
               
367-576
               

               
Cow position:
               
chr5:59759199-59759401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
59, 122
               

               
Conread position:
               
367-576
               

               
Cow position:
               
chr5:61576353-61576568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
52, 170
               

               
Conread position:
               
367-576
               

               
Cow position:
               
chr5:64137065-64137279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
62, 198
               

               
Conread position:
               
367-576
               

               
Cow position:
               
chr5:65601274-65601480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
71, 62
               

               
Conread position:
               
367-578
               

               
Cow position:
               
chr5:21944195-21944423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
46, 209
               

               
Conread position:
               
367-578
               

               
Cow position:
               
chr5:32140893-32140683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
63, 15
               

               
Conread position:
               
367-579
               

               
Cow position:
               
chr5:11668365-11668159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
92, 58
               

               
Conread position:
               
367-579
               

               
Cow position:
               
chr5:47871237-47871014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
367-579
               

               
Cow position:
               
chr5:67932648-67932440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
34, 46
               

               
Conread position:
               
367-582
               

               
Cow position:
               
chr5:43395324-43395120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
63, 21
               

               
Conread position:
               
367-582
               

               
Cow position:
               
chr5:50943340-50943114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
367-584
               

               
Cow position:
               
chr5:29212762-29212975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
367-584
               

               
Cow position:
               
chr5:43474661-43474876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
64, 155
               

               
Conread position:
               
367-587
               

               
Cow position:
               
chr5:19470373-19470156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
52, 127
               

               
Conread position:
               
367-588
               

               
Cow position:
               
chr5:55176700-55176930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
367-589
               

               
Cow position:
               
chr5:31640241-31640461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
54, 104
               

               
Conread position:
               
367-592
               

               
Cow position:
               
chr5:26561967-26562197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
50, 121
               

               
Conread position:
               
367-592
               

               
Cow position:
               
chr5:72895506-72895725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
186, 50
               

               
Conread position:
               
367-593
               

               
Cow position:
               
chr5:14314335-14314568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
367-593
               

               
Cow position:
               
chr5:16025647-16025420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
54, 146
               

               
Conread position:
               
367-593
               

               
Cow position:
               
chr5:28946245-28946019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
38, 63
               

               
Conread position:
               
367-593
               

               
Cow position:
               
chr5:32696999-32696782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
64, 32
               

               
Conread position:
               
367-593
               

               
Cow position:
               
chr5:36855026-36855244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
102, 44
               

               
Conread position:
               
367-593
               

               
Cow position:
               
chr5:52000032-52000263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
54, 183
               

               
Conread position:
               
367-593
               

               
Cow position:
               
chr5:57736928-57737139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
63, 44
               

               
Conread position:
               
367-593
               

               
Cow position:
               
chr5:65924885-65924649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
54, 24
               

               
Conread position:
               
367-594
               

               
Cow position:
               
chr5:3771660-3771892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
97, 63
               

               
Conread position:
               
367-594
               

               
Cow position:
               
chr5:7044897-7044664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
367-594
               

               
Cow position:
               
chr5:47888901-47888670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
54, 164
               

               
Conread position:
               
367-594
               

               
Cow position:
               
chr5:54405082-54404848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
54, 75
               

               
Conread position:
               
367-594
               

               
Cow position:
               
chr5:61840000-61840232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
63, 178
               

               
Conread position:
               
367-595
               

               
Cow position:
               
chr5:44796905-44796691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
104, 49
               

               
Conread position:
               
367-595
               

               
Cow position:
               
chr5:47601630-47601854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
43, 180
               

               
Conread position:
               
367-595
               

               
Cow position:
               
chr5:64823499-64823269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
62, 133
               

               
Conread position:
               
367-596
               

               
Cow position:
               
chr5:9090210-9089980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
54, 159
               

               
Conread position:
               
367-596
               

               
Cow position:
               
chr5:26467433-26467669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
367-596
               

               
Cow position:
               
chr5:27615329-27615561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
26, 32
               

               
Conread position:
               
367-596
               

               
Cow position:
               
chr5:34561822-34562059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
367-596
               

               
Cow position:
               
chr5:41546080-41545850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
24, 107
               

               
Conread position:
               
367-596
               

               
Cow position:
               
chr5:46510053-46509822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
62, 112
               

               
Conread position:
               
367-596
               

               
Cow position:
               
chr5:55967069-55966837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 174
               

               
Conread position:
               
367-596
               

               
Cow position:
               
chr5:57074521-57074288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 148
               

               
Conread position:
               
367-596
               

               
Cow position:
               
chr5:61725783-61726010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
54, 95
               

               
Conread position:
               
367-596
               

               
Cow position:
               
chr5:64139376-64139603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
56, 164
               

               
Conread position:
               
367-596
               

               
Cow position:
               
chr5:64176307-64176083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
58, 166
               

               
Conread position:
               
367-596
               

               
Cow position:
               
chr5:64758950-64758724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
104, 31
               

               
Conread position:
               
367-599
               

               
Cow position:
               
chr5:6045101-6045340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
367-599
               

               
Cow position:
               
chr5:7755739-7755523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
63, 40
               

               
Conread position:
               
367-599
               

               
Cow position:
               
chr5:16893962-16893725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
60, 123
               

               
Conread position:
               
367-599
               

               
Cow position:
               
chr5:20407853-20407632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
63, 143
               

               
Conread position:
               
367-599
               

               
Cow position:
               
chr5:21617269-21617504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 116
               

               
Conread position:
               
367-599
               

               
Cow position:
               
chr5:29903708-29903477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
55, 13
               

               
Conread position:
               
367-599
               

               
Cow position:
               
chr5:30844924-30845159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
44, 151
               

               
Conread position:
               
367-599
               

               
Cow position:
               
chr5:35235895-35235663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
62, 120
               

               
Conread position:
               
367-599
               

               
Cow position:
               
chr5:35826404-35826648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
41, 175
               

               
Conread position:
               
367-599
               

               
Cow position:
               
chr5:37714091-37713848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
26, 136
               

               
Conread position:
               
367-599
               

               
Cow position:
               
chr5:41164902-41165134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
28, 75
               

               
Conread position:
               
367-599
               

               
Cow position:
               
chr5:45845882-45845645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 153
               

               
Conread position:
               
367-599
               

               
Cow position:
               
chr5:50533569-50533338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
63, 44
               

               
Conread position:
               
367-599
               

               
Cow position:
               
chr5:53835528-53835763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 98
               

               
Conread position:
               
367-599
               

               
Cow position:
               
chr5:57935300-57935062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
367-599
               

               
Cow position:
               
chr5:58793801-58793561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
54, 78
               

               
Conread position:
               
367-599
               

               
Cow position:
               
chr5:60126187-60126419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 84
               

               
Conread position:
               
367-599
               

               
Cow position:
               
chr5:65752670-65752906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
367-599
               

               
Cow position:
               
chr5:66257456-66257685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
367-599
               

               
Cow position:
               
chr5:69461148-69461379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 145
               

               
Conread position:
               
367-599
               

               
Cow position:
               
chr5:72564575-72564810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
102, 0
               

               
Conread position:
               
367-600
               

               
Cow position:
               
chr5:22242972-22242725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
54, 161
               

               
Conread position:
               
367-601
               

               
Cow position:
               
chr5:33414594-33414360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
73, 17
               

               
Conread position:
               
367-601
               

               
Cow position:
               
chr5:40109315-40109541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
60, 31
               

               
Conread position:
               
367-614
               

               
Cow position:
               
chr5:34115476-34115714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
170, 43
               

               
Conread position:
               
368-578
               

               
Cow position:
               
chr5:75437082-75436861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
51, 193
               

               
Conread position:
               
368-579
               

               
Cow position:
               
chr5:17999680-17999466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
61, 189
               

               
Conread position:
               
368-596
               

               
Cow position:
               
chr5:41604427-41604671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
39, 219
               

               
Conread position:
               
368-596
               

               
Cow position:
               
chr5:74015754-74015985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
369-547
               

               
Cow position:
               
chr5:45036837-45037017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
369-576
               

               
Cow position:
               
chr5:11427426-11427210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
52, 172
               

               
Conread position:
               
369-579
               

               
Cow position:
               
chr5:69731333-69731532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
369-591
               

               
Cow position:
               
chr5:46512951-46512730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
17, 22
               

               
Conread position:
               
369-593
               

               
Cow position:
               
chr5:35209661-35209435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
60, 124
               

               
Conread position:
               
369-596
               

               
Cow position:
               
chr5:12322985-12322761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
59, 143
               

               
Conread position:
               
369-596
               

               
Cow position:
               
chr5:56523989-56524217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
52, 17
               

               
Conread position:
               
369-596
               

               
Cow position:
               
chr5:64398822-64399056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
52, 126
               

               
Conread position:
               
369-599
               

               
Cow position:
               
chr5:15598418-15598189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 72
               

               
Conread position:
               
369-599
               

               
Cow position:
               
chr5:39447715-39447489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
61, 123
               

               
Conread position:
               
369-599
               

               
Cow position:
               
chr5:67243741-67243967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
52, 131
               

               
Conread position:
               
369-600
               

               
Cow position:
               
chr5:34915957-34916178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
370-599
               

               
Cow position:
               
chr5:21828681-21828914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
371-545
               

               
Cow position:
               
chr5:54111736-54111914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
46, 170
               

               
Conread position:
               
371-599
               

               
Cow position:
               
chr5:24485608-24485388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
171, 37
               

               
Conread position:
               
372-509
               

               
Cow position:
               
chr5:15462532-15462672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
58, 39
               

               
Conread position:
               
372-519
               

               
Cow position:
               
chr5:57576032-57576183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
49, 30
               

               
Conread position:
               
372-558
               

               
Cow position:
               
chr5:17768325-17768135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
30, 38
               

               
Conread position:
               
372-568
               

               
Cow position:
               
chr5:6575769-6575574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
97, 55
               

               
Conread position:
               
372-593
               

               
Cow position:
               
chr5:55928761-55928984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
57, 105
               

               
Conread position:
               
372-595
               

               
Cow position:
               
chr5:20783443-20783662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
58, 139
               

               
Conread position:
               
372-599
               

               
Cow position:
               
chr5:30253560-30253787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 184
               

               
Conread position:
               
372-599
               

               
Cow position:
               
chr5:31144958-31144741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
58, 15
               

               
Conread position:
               
372-599
               

               
Cow position:
               
chr5:62172237-62172458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
373-549
               

               
Cow position:
               
chr5:4220800-4220983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
373-582
               

               
Cow position:
               
chr5:34167780-34167989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
57, 66
               

               
Conread position:
               
373-596
               

               
Cow position:
               
chr5:22643398-22643183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
57, 109
               

               
Conread position:
               
373-599
               

               
Cow position:
               
chr5:14629996-14629764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
7, 17
               

               
Conread position:
               
373-599
               

               
Cow position:
               
chr5:23168999-23168780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
175, 40
               

               
Conread position:
               
374-553
               

               
Cow position:
               
chr5:360126-359941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
374-571
               

               
Cow position:
               
chr5:42747976-42748176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
56, 66
               

               
Conread position:
               
374-599
               

               
Cow position:
               
chr5:63236037-63235809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
57, 163
               

               
Conread position:
               
375-596
               

               
Cow position:
               
chr5:3668719-3668941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
42, 135
               

               
Conread position:
               
375-599
               

               
Cow position:
               
chr5:44028480-44028257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
50, 112
               

               
Conread position:
               
376-524
               

               
Cow position:
               
chr5:48178856-48178705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
47, 32
               

               
Conread position:
               
376-525
               

               
Cow position:
               
chr5:46104113-46103967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
376-558
               

               
Cow position:
               
chr5:6286604-6286418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
45, 152
               

               
Conread position:
               
376-576
               

               
Cow position:
               
chr5:28957794-28957591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
45, 140
               

               
Conread position:
               
377-518
               

               
Cow position:
               
chr5:50870365-50870512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
377-556
               

               
Cow position:
               
chr5:1950238-1950060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
58, 93
               

               
Conread position:
               
377-576
               

               
Cow position:
               
chr5:53146063-53145860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
44, 97
               

               
Conread position:
               
379-599
               

               
Cow position:
               
chr5:29980160-29979936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
42, 93
               

               
Conread position:
               
380-549
               

               
Cow position:
               
chr5:65933105-65932930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
380-584
               

               
Cow position:
               
chr5:32956269-32956063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
50, 176
               

               
Conread position:
               
380-596
               

               
Cow position:
               
chr5:3549951-3549738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
159, 36
               

               
Conread position:
               
383-596
               

               
Cow position:
               
chr5:43992150-43992367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
385-599
               

               
Cow position:
               
chr5:30950088-30949869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
39, 135
               

               
Conread position:
               
386-531
               

               
Cow position:
               
chr5:61875345-61875205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
31, 48
               

               
Conread position:
               
386-576
               

               
Cow position:
               
chr5:64697613-64697809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
35, 71
               

               
Conread position:
               
387-596
               

               
Cow position:
               
chr5:30629324-30629116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
43, 129
               

               
Conread position:
               
388-599
               

               
Cow position:
               
chr5:55955740-55955954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
31, 76
               

               
Conread position:
               
389-599
               

               
Cow position:
               
chr5:27015516-27015726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
32, 126
               

               
Conread position:
               
390-576
               

               
Cow position:
               
chr5:41486901-41486714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
5, 36
               

               
Conread position:
               
390-599
               

               
Cow position:
               
chr5:54060110-54060324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
391-599
               

               
Cow position:
               
chr5:21920205-21920427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
30, 175
               

               
Conread position:
               
391-599
               

               
Cow position:
               
chr5:55068543-55068752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
22, 101
               

               
Conread position:
               
393-592
               

               
Cow position:
               
chr5:45397418-45397612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
36, 98
               

               
Conread position:
               
393-592
               

               
Cow position:
               
chr5:71579013-71579215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
20, 148
               

               
Conread position:
               
393-599
               

               
Cow position:
               
chr5:46426011-46425809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
37, 116
               

               
Conread position:
               
399-599
               

               
Cow position:
               
chr5:42050393-42050598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
22, 121
               

               
Conread position:
               
399-599
               

               
Cow position:
               
chr5:67540358-67540155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
8, 142
               

               
Conread position:
               
400-553
               

               
Cow position:
               
chr5:44849876-44849728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
71, 30
               

               
Conread position:
               
401-550
               

               
Cow position:
               
chr5:33265599-33265458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
136, 26
               

               
Conread position:
               
402-593
               

               
Cow position:
               
chr5:19278851-19278667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
26, 134
               

               
Conread position:
               
403-550
               

               
Cow position:
               
chr5:12673610-12673470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
27, 35
               

               
Conread position:
               
403-601
               

               
Cow position:
               
chr5:56877338-56877529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
27, 73
               

               
Conread position:
               
405-588
               

               
Cow position:
               
chr5:16206308-16206118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
406-599
               

               
Cow position:
               
chr5:51801117-51800926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
24, 31
               

               
Conread position:
               
408-576
               

               
Cow position:
               
chr5:29097214-29097391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
408-576
               

               
Cow position:
               
chr5:65883921-65883749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
408-590
               

               
Cow position:
               
chr5:63865650-63865835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
408-596
               

               
Cow position:
               
chr5:39874980-39875167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
59, 19
               

               
Conread position:
               
408-601
               

               
Cow position:
               
chr5:50972385-50972578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
25, 104
               

               
Conread position:
               
409-599
               

               
Cow position:
               
chr5:57101920-57101733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
21, 98
               

               
Conread position:
               
410-581
               

               
Cow position:
               
chr5:25035385-25035213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
126, 166
               

               
Conread position:
               
411-557
               

               
Cow position:
               
chr5:19294628-19294487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
19, 35
               

               
Conread position:
               
412-590
               

               
Cow position:
               
chr5:45574480-45574655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
136, 18
               

               
Conread position:
               
414-592
               

               
Cow position:
               
chr5:35763139-35763310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
16, 23
               

               
Conread position:
               
416-602
               

               
Cow position:
               
chr5:14473550-14473355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
44, 11
               

               
Conread position:
               
418-592
               

               
Cow position:
               
chr5:38647224-38647394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
119, 0
               

               
Conread position:
               
419-599
               

               
Cow position:
               
chr5:991332-991510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
11, 118
               

               
Conread position:
               
421-596
               

               
Cow position:
               
chr5:54768042-54767866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
9, 135
               

               
Conread position:
               
423-558
               

               
Cow position:
               
chr5:44726456-44726319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
6, 0
               

               
Conread position:
               
427-601
               

               
Cow position:
               
chr5:56680122-56680299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
433-599
               

               
Cow position:
               
chr5:49440991-49440825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
113, 72
               

               
Conread position:
               
439-579
               

               
Cow position:
               
chr5:13717684-13717542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
30, 109
               

               
Conread position:
               
440-599
               

               
Cow position:
               
chr5:7697893-7698046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
440-601
               

               
Cow position:
               
chr5:19523785-19523948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
26, 97
               

               
Conread position:
               
441-601
               

               
Cow position:
               
chr5:55849854-55849696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
442-599
               

               
Cow position:
               
chr5:60183691-60183849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
442-612
               

               
Cow position:
               
chr5:60448105-60448275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
29, 97
               

               
Conread position:
               
448-596
               

               
Cow position:
               
chr5:54375611-54375459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
98, 106
               

               
Conread position:
               
449-599
               

               
Cow position:
               
chr5:36039107-36038955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
89, 52
               

               
Conread position:
               
465-599
               

               
Cow position:
               
chr5:43402813-43402951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
72, 0
               
Show alignments to all cow chromosomes.