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Cow genome map

           
Conread name:
           
LyN1-MLN01D120052
        

               
Conread position:
               
320-599
               

               
Cow position:
               
chr8:29262536-29262808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 28
               

               
Conread position:
               
324-525
               

               
Cow position:
               
chr8:10434562-10434766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
8, 64
               

               
Conread position:
               
325-599
               

               
Cow position:
               
chr8:18081291-18081567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
7, 149
               

               
Conread position:
               
326-596
               

               
Cow position:
               
chr8:3704379-3704651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
33, 112
               

               
Conread position:
               
328-519
               

               
Cow position:
               
chr8:56824256-56824061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
331-509
               

               
Cow position:
               
chr8:21268761-21268582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
28, 76
               

               
Conread position:
               
331-552
               

               
Cow position:
               
chr8:38358187-38358414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
28, 142
               

               
Conread position:
               
331-563
               

               
Cow position:
               
chr8:6682160-6681919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
28, 214
               

               
Conread position:
               
331-582
               

               
Cow position:
               
chr8:33432020-33432267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
28, 97
               

               
Conread position:
               
331-593
               

               
Cow position:
               
chr8:15395093-15394835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
28, 93
               

               
Conread position:
               
331-595
               

               
Cow position:
               
chr8:42762665-42762404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 78
               

               
Conread position:
               
331-599
               

               
Cow position:
               
chr8:2814382-2814655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
30, 37
               

               
Conread position:
               
331-599
               

               
Cow position:
               
chr8:32988507-32988772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
28, 96
               

               
Conread position:
               
332-599
               

               
Cow position:
               
chr8:9131164-9130897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
37, 124
               

               
Conread position:
               
340-575
               

               
Cow position:
               
chr8:34477888-34478127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 27
               

               
Conread position:
               
344-599
               

               
Cow position:
               
chr8:55925973-55926231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 131
               

               
Conread position:
               
349-551
               

               
Cow position:
               
chr8:15972706-15972504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
10, 20
               

               
Conread position:
               
349-558
               

               
Cow position:
               
chr8:4591293-4591084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
10, 20
               

               
Conread position:
               
349-558
               

               
Cow position:
               
chr8:16487527-16487314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
10, 79
               

               
Conread position:
               
349-596
               

               
Cow position:
               
chr8:9917671-9917909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
10, 38
               

               
Conread position:
               
349-596
               

               
Cow position:
               
chr8:42794530-42794294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
81, 17
               

               
Conread position:
               
349-599
               

               
Cow position:
               
chr8:3338869-3339113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 17
               

               
Conread position:
               
349-599
               

               
Cow position:
               
chr8:18207367-18207105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
10, 193
               

               
Conread position:
               
349-599
               

               
Cow position:
               
chr8:39630550-39630806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 177
               

               
Conread position:
               
349-615
               

               
Cow position:
               
chr8:1596392-1596125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
10, 206
               

               
Conread position:
               
353-599
               

               
Cow position:
               
chr8:57042035-57041799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
68, 25
               

               
Conread position:
               
354-593
               

               
Cow position:
               
chr8:58520085-58520318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
76, 13
               

               
Conread position:
               
355-594
               

               
Cow position:
               
chr8:57208694-57208445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
13, 137
               

               
Conread position:
               
355-599
               

               
Cow position:
               
chr8:57406550-57406792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
38, 110
               

               
Conread position:
               
356-575
               

               
Cow position:
               
chr8:24980486-24980706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
65, 10
               

               
Conread position:
               
366-601
               

               
Cow position:
               
chr8:33407050-33406814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 129
               

               
Conread position:
               
367-507
               

               
Cow position:
               
chr8:29917555-29917414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
20, 66
               

               
Conread position:
               
367-508
               

               
Cow position:
               
chr8:47861138-47860999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
62, 67
               

               
Conread position:
               
367-514
               

               
Cow position:
               
chr8:58636568-58636710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
367-519
               

               
Cow position:
               
chr8:54572442-54572597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
367-524
               

               
Cow position:
               
chr8:24933950-24934110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
56, 36
               

               
Conread position:
               
367-532
               

               
Cow position:
               
chr8:34799471-34799640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
367-535
               

               
Cow position:
               
chr8:25083068-25083244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
63, 163
               

               
Conread position:
               
367-536
               

               
Cow position:
               
chr8:28221769-28221595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
367-537
               

               
Cow position:
               
chr8:36055606-36055431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
54, 129
               

               
Conread position:
               
367-542
               

               
Cow position:
               
chr8:22103383-22103208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
23, 128
               

               
Conread position:
               
367-542
               

               
Cow position:
               
chr8:42575493-42575673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
367-545
               

               
Cow position:
               
chr8:45071173-45071350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
54, 103
               

               
Conread position:
               
367-552
               

               
Cow position:
               
chr8:39144561-39144737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
171, 52
               

               
Conread position:
               
367-552
               

               
Cow position:
               
chr8:47665894-47665710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
63, 41
               

               
Conread position:
               
367-553
               

               
Cow position:
               
chr8:35436816-35436628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
33, 17
               

               
Conread position:
               
367-553
               

               
Cow position:
               
chr8:38357051-38356860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
57, 61
               

               
Conread position:
               
367-553
               

               
Cow position:
               
chr8:52195718-52195905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
63, 99
               

               
Conread position:
               
367-558
               

               
Cow position:
               
chr8:57045700-57045507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
54, 148
               

               
Conread position:
               
367-558
               

               
Cow position:
               
chr8:60463315-60463511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
367-559
               

               
Cow position:
               
chr8:35457044-35456850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
64, 123
               

               
Conread position:
               
367-562
               

               
Cow position:
               
chr8:4563629-4563431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
51, 176
               

               
Conread position:
               
367-562
               

               
Cow position:
               
chr8:33993963-33994157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
63, 25
               

               
Conread position:
               
367-568
               

               
Cow position:
               
chr8:18057535-18057754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
367-568
               

               
Cow position:
               
chr8:33849452-33849648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
61, 99
               

               
Conread position:
               
367-574
               

               
Cow position:
               
chr8:37433420-37433631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
56, 188
               

               
Conread position:
               
367-574
               

               
Cow position:
               
chr8:40033018-40032804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
367-575
               

               
Cow position:
               
chr8:59043303-59043091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
367-576
               

               
Cow position:
               
chr8:1252752-1252967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
62, 91
               

               
Conread position:
               
367-576
               

               
Cow position:
               
chr8:12058511-12058733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
367-576
               

               
Cow position:
               
chr8:17199639-17199424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
50, 126
               

               
Conread position:
               
367-576
               

               
Cow position:
               
chr8:20212708-20212493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
63, 19
               

               
Conread position:
               
367-576
               

               
Cow position:
               
chr8:20563964-20563751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
61, 34
               

               
Conread position:
               
367-576
               

               
Cow position:
               
chr8:24872071-24871862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
102, 58
               

               
Conread position:
               
367-576
               

               
Cow position:
               
chr8:29765054-29765268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
367-576
               

               
Cow position:
               
chr8:41627322-41627108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
367-576
               

               
Cow position:
               
chr8:43795025-43795234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
70, 63
               

               
Conread position:
               
367-576
               

               
Cow position:
               
chr8:46623739-46623535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
94, 63
               

               
Conread position:
               
367-578
               

               
Cow position:
               
chr8:43687339-43687556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
56, 203
               

               
Conread position:
               
367-579
               

               
Cow position:
               
chr8:21826951-21826738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
104, 63
               

               
Conread position:
               
367-579
               

               
Cow position:
               
chr8:24364143-24363929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
63, 54
               

               
Conread position:
               
367-579
               

               
Cow position:
               
chr8:32295940-32295717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
367-579
               

               
Cow position:
               
chr8:35966235-35966017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
53, 195
               

               
Conread position:
               
367-579
               

               
Cow position:
               
chr8:50311046-50310842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
104, 41
               

               
Conread position:
               
367-591
               

               
Cow position:
               
chr8:4205724-4205948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
68, 60
               

               
Conread position:
               
367-591
               

               
Cow position:
               
chr8:20306782-20307000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
23, 75
               

               
Conread position:
               
367-591
               

               
Cow position:
               
chr8:26386417-26386189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
63, 29
               

               
Conread position:
               
367-592
               

               
Cow position:
               
chr8:16053339-16053559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
48, 64
               

               
Conread position:
               
367-592
               

               
Cow position:
               
chr8:20683771-20683996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
62, 28
               

               
Conread position:
               
367-592
               

               
Cow position:
               
chr8:38681677-38681905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
52, 146
               

               
Conread position:
               
367-593
               

               
Cow position:
               
chr8:20339084-20339304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
62, 52
               

               
Conread position:
               
367-593
               

               
Cow position:
               
chr8:30135715-30135948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
33, 26
               

               
Conread position:
               
367-593
               

               
Cow position:
               
chr8:37147918-37148147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 186
               

               
Conread position:
               
367-593
               

               
Cow position:
               
chr8:54052104-54052333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
54, 163
               

               
Conread position:
               
367-594
               

               
Cow position:
               
chr8:20354963-20354747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
62, 17
               

               
Conread position:
               
367-595
               

               
Cow position:
               
chr8:20157962-20157733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
99, 58
               

               
Conread position:
               
367-595
               

               
Cow position:
               
chr8:38780509-38780737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
42, 17
               

               
Conread position:
               
367-595
               

               
Cow position:
               
chr8:46235498-46235725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 148
               

               
Conread position:
               
367-596
               

               
Cow position:
               
chr8:5979741-5979971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 41
               

               
Conread position:
               
367-596
               

               
Cow position:
               
chr8:25871523-25871756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
367-596
               

               
Cow position:
               
chr8:31253610-31253841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
367-596
               

               
Cow position:
               
chr8:33286969-33287192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
197, 62
               

               
Conread position:
               
367-596
               

               
Cow position:
               
chr8:34287725-34287952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
50, 105
               

               
Conread position:
               
367-596
               

               
Cow position:
               
chr8:36505166-36505408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
367-596
               

               
Cow position:
               
chr8:38893808-38894040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
63, 124
               

               
Conread position:
               
367-596
               

               
Cow position:
               
chr8:47136213-47135983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
54, 105
               

               
Conread position:
               
367-596
               

               
Cow position:
               
chr8:49265510-49265274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
56, 71
               

               
Conread position:
               
367-596
               

               
Cow position:
               
chr8:51905246-51905010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
56, 101
               

               
Conread position:
               
367-596
               

               
Cow position:
               
chr8:53558804-53558578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
102, 40
               

               
Conread position:
               
367-598
               

               
Cow position:
               
chr8:21382896-21382661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
367-599
               

               
Cow position:
               
chr8:6233099-6232865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
367-599
               

               
Cow position:
               
chr8:6531216-6531444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
63, 82
               

               
Conread position:
               
367-599
               

               
Cow position:
               
chr8:6724541-6724306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
52, 86
               

               
Conread position:
               
367-599
               

               
Cow position:
               
chr8:19998284-19998053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
44, 34
               

               
Conread position:
               
367-599
               

               
Cow position:
               
chr8:31297067-31297297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 13
               

               
Conread position:
               
367-599
               

               
Cow position:
               
chr8:35580835-35580604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 35
               

               
Conread position:
               
367-599
               

               
Cow position:
               
chr8:35990845-35991081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 122
               

               
Conread position:
               
367-599
               

               
Cow position:
               
chr8:54031676-54031912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
63, 80
               

               
Conread position:
               
367-599
               

               
Cow position:
               
chr8:57389088-57389319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
164, 60
               

               
Conread position:
               
367-600
               

               
Cow position:
               
chr8:31775982-31776223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
61, 196
               

               
Conread position:
               
367-601
               

               
Cow position:
               
chr8:4924363-4924601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 177
               

               
Conread position:
               
367-601
               

               
Cow position:
               
chr8:6485137-6484898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
367-601
               

               
Cow position:
               
chr8:10970626-10970867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 138
               

               
Conread position:
               
367-601
               

               
Cow position:
               
chr8:12795613-12795857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
94, 63
               

               
Conread position:
               
367-601
               

               
Cow position:
               
chr8:32621198-32620950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
367-601
               

               
Cow position:
               
chr8:55716554-55716788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
58, 106
               

               
Conread position:
               
367-601
               

               
Cow position:
               
chr8:59642702-59642462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
59, 100
               

               
Conread position:
               
367-602
               

               
Cow position:
               
chr8:642758-642542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
368-573
               

               
Cow position:
               
chr8:57397732-57397526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
62, 116
               

               
Conread position:
               
368-579
               

               
Cow position:
               
chr8:1472861-1473077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
62, 119
               

               
Conread position:
               
368-593
               

               
Cow position:
               
chr8:20836927-20837149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
103, 62
               

               
Conread position:
               
368-599
               

               
Cow position:
               
chr8:10263366-10263134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
53, 12
               

               
Conread position:
               
369-540
               

               
Cow position:
               
chr8:31646206-31646036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
61, 48
               

               
Conread position:
               
369-551
               

               
Cow position:
               
chr8:24834528-24834697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
369-558
               

               
Cow position:
               
chr8:44664782-44664585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
52, 125
               

               
Conread position:
               
369-561
               

               
Cow position:
               
chr8:3015272-3015469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
52, 29
               

               
Conread position:
               
369-575
               

               
Cow position:
               
chr8:2881863-2882072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
369-576
               

               
Cow position:
               
chr8:47342535-47342746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
369-579
               

               
Cow position:
               
chr8:31690602-31690820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
27, 33
               

               
Conread position:
               
369-593
               

               
Cow position:
               
chr8:53383205-53383422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
55, 62
               

               
Conread position:
               
369-596
               

               
Cow position:
               
chr8:42139244-42139016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
28, 17
               

               
Conread position:
               
369-599
               

               
Cow position:
               
chr8:10297938-10297706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
47, 185
               

               
Conread position:
               
369-599
               

               
Cow position:
               
chr8:24371915-24371683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
61, 99
               

               
Conread position:
               
369-599
               

               
Cow position:
               
chr8:44437569-44437793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
102, 61
               

               
Conread position:
               
369-601
               

               
Cow position:
               
chr8:16031771-16031546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
369-601
               

               
Cow position:
               
chr8:36375711-36375483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
41, 11
               

               
Conread position:
               
370-527
               

               
Cow position:
               
chr8:24237558-24237712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
60, 14
               

               
Conread position:
               
370-551
               

               
Cow position:
               
chr8:16023842-16023658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
51, 116
               

               
Conread position:
               
371-558
               

               
Cow position:
               
chr8:8481146-8480966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
48, 25
               

               
Conread position:
               
371-568
               

               
Cow position:
               
chr8:33693304-33693512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
47, 183
               

               
Conread position:
               
372-527
               

               
Cow position:
               
chr8:39039831-39039990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
45, 70
               

               
Conread position:
               
372-599
               

               
Cow position:
               
chr8:2774589-2774817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
372-601
               

               
Cow position:
               
chr8:29030291-29030053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
138, 41
               

               
Conread position:
               
373-576
               

               
Cow position:
               
chr8:3976023-3976242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
373-599
               

               
Cow position:
               
chr8:13975698-13975926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
48, 108
               

               
Conread position:
               
373-599
               

               
Cow position:
               
chr8:38464818-38465030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
48, 113
               

               
Conread position:
               
373-599
               

               
Cow position:
               
chr8:39174445-39174212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
373-599
               

               
Cow position:
               
chr8:59438479-59438249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
48, 101
               

               
Conread position:
               
374-548
               

               
Cow position:
               
chr8:25572858-25573035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
374-594
               

               
Cow position:
               
chr8:42145968-42145744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
41, 54
               

               
Conread position:
               
376-599
               

               
Cow position:
               
chr8:10400115-10400330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
59, 51
               

               
Conread position:
               
377-558
               

               
Cow position:
               
chr8:48767567-48767752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
44, 155
               

               
Conread position:
               
377-578
               

               
Cow position:
               
chr8:32460998-32460798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
53, 171
               

               
Conread position:
               
377-592
               

               
Cow position:
               
chr8:634122-633908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
58, 50
               

               
Conread position:
               
377-596
               

               
Cow position:
               
chr8:43027851-43027625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
379-553
               

               
Cow position:
               
chr8:1107381-1107205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
42, 90
               

               
Conread position:
               
379-596
               

               
Cow position:
               
chr8:40549796-40549582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
109, 34
               

               
Conread position:
               
380-574
               

               
Cow position:
               
chr8:10699649-10699457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
50, 132
               

               
Conread position:
               
382-593
               

               
Cow position:
               
chr8:10456281-10456492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
163, 45
               

               
Conread position:
               
383-543
               

               
Cow position:
               
chr8:21222447-21222615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
384-593
               

               
Cow position:
               
chr8:43439422-43439637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
35, 128
               

               
Conread position:
               
385-519
               

               
Cow position:
               
chr8:53929760-53929630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
81, 40
               

               
Conread position:
               
386-551
               

               
Cow position:
               
chr8:34769324-34769489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
75, 28
               

               
Conread position:
               
386-599
               

               
Cow position:
               
chr8:12213829-12214038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
43, 142
               

               
Conread position:
               
387-541
               

               
Cow position:
               
chr8:26600373-26600524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
44, 19
               

               
Conread position:
               
388-602
               

               
Cow position:
               
chr8:20150741-20150524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
33, 166
               

               
Conread position:
               
390-594
               

               
Cow position:
               
chr8:20783443-20783235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
40, 167
               

               
Conread position:
               
399-599
               

               
Cow position:
               
chr8:37882177-37882376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
31, 38
               

               
Conread position:
               
399-601
               

               
Cow position:
               
chr8:31985099-31985296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
17, 26
               

               
Conread position:
               
400-547
               

               
Cow position:
               
chr8:35596927-35596777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
400-593
               

               
Cow position:
               
chr8:6073981-6073791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
12, 22
               

               
Conread position:
               
401-584
               

               
Cow position:
               
chr8:2931866-2931689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
28, 99
               

               
Conread position:
               
401-596
               

               
Cow position:
               
chr8:39845455-39845645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
29, 80
               

               
Conread position:
               
401-596
               

               
Cow position:
               
chr8:40280522-40280715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
30, 10
               

               
Conread position:
               
402-592
               

               
Cow position:
               
chr8:19284332-19284526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
19, 55
               

               
Conread position:
               
403-590
               

               
Cow position:
               
chr8:46616248-46616432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
27, 121
               

               
Conread position:
               
404-576
               

               
Cow position:
               
chr8:41900803-41900628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
26, 11
               

               
Conread position:
               
404-596
               

               
Cow position:
               
chr8:39807432-39807627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
134, 23
               

               
Conread position:
               
406-559
               

               
Cow position:
               
chr8:44882783-44882939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
408-557
               

               
Cow position:
               
chr8:3872276-3872126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
408-589
               

               
Cow position:
               
chr8:983578-983753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
22, 83
               

               
Conread position:
               
408-593
               

               
Cow position:
               
chr8:1187761-1187946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
55, 22
               

               
Conread position:
               
408-595
               

               
Cow position:
               
chr8:33974400-33974586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
22, 80
               

               
Conread position:
               
408-599
               

               
Cow position:
               
chr8:19011955-19011764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
22, 146
               

               
Conread position:
               
410-599
               

               
Cow position:
               
chr8:16653261-16653446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
20, 81
               

               
Conread position:
               
412-584
               

               
Cow position:
               
chr8:11782826-11783000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
18, 54
               

               
Conread position:
               
413-599
               

               
Cow position:
               
chr8:37347611-37347424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
17, 36
               

               
Conread position:
               
415-596
               

               
Cow position:
               
chr8:37192216-37192392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
16, 130
               

               
Conread position:
               
417-592
               

               
Cow position:
               
chr8:55897956-55897790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
13, 64
               

               
Conread position:
               
421-550
               

               
Cow position:
               
chr8:935560-935692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
421-596
               

               
Cow position:
               
chr8:29026782-29026609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
49, 114
               

               
Conread position:
               
421-599
               

               
Cow position:
               
chr8:35563184-35563366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
425-571
               

               
Cow position:
               
chr8:11927009-11927149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
427-596
               

               
Cow position:
               
chr8:58171296-58171462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
138, 38
               

               
Conread position:
               
427-599
               

               
Cow position:
               
chr8:637923-638091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
110, 62
               

               
Conread position:
               
428-599
               

               
Cow position:
               
chr8:51480969-51480800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
43, 37
               

               
Conread position:
               
433-589
               

               
Cow position:
               
chr8:6675013-6675169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
433-595
               

               
Cow position:
               
chr8:45447236-45447069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
118, 139
               

               
Conread position:
               
433-596
               

               
Cow position:
               
chr8:25388008-25388168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
105, 0
               

               
Conread position:
               
436-599
               

               
Cow position:
               
chr8:37334041-37334203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
100, 85
               

               
Conread position:
               
440-592
               

               
Cow position:
               
chr8:19975943-19975789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
440-596
               

               
Cow position:
               
chr8:35211050-35210899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
104, 77
               

               
Conread position:
               
443-599
               

               
Cow position:
               
chr8:5866952-5867108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
93, 70
               

               
Conread position:
               
446-596
               

               
Cow position:
               
chr8:43227851-43228001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
90, 110
               

               
Conread position:
               
447-593
               

               
Cow position:
               
chr8:54147544-54147691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
91, 77
               

               
Conread position:
               
454-596
               

               
Cow position:
               
chr8:6224548-6224406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
85, 25
               

               
Conread position:
               
459-593
               

               
Cow position:
               
chr8:32967679-32967813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               
Show alignments to all cow chromosomes.