• Home
• Research
• Resources
• Publications
• About
• People
• Events
• Jobs
• News
• Contact

Cow genome map

           
Conread name:
           
LyN1-MLN01E020019
        

               
Conread position:
               
1-140
               

               
Cow position:
               
chr17:24334692-24334551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
1-145
               

               
Cow position:
               
chr17:24612889-24612749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
29, 71
               

               
Conread position:
               
1-161
               

               
Cow position:
               
chr17:27606757-27606600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
29, 85
               

               
Conread position:
               
1-168
               

               
Cow position:
               
chr17:21236770-21236598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
1-171
               

               
Cow position:
               
chr17:15103498-15103667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
29, 67
               

               
Conread position:
               
1-187
               

               
Cow position:
               
chr17:8663751-8663561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
27, 126
               

               
Conread position:
               
1-191
               

               
Cow position:
               
chr17:11920918-11921112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
1-195
               

               
Cow position:
               
chr17:6787184-6786985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
29, 117
               

               
Conread position:
               
1-195
               

               
Cow position:
               
chr17:15355179-15354980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
5, 0
               

               
Conread position:
               
1-195
               

               
Cow position:
               
chr17:35043691-35043875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
1-196
               

               
Cow position:
               
chr17:44234489-44234298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
29, 72
               

               
Conread position:
               
1-203
               

               
Cow position:
               
chr17:24895321-24895114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
69, 33
               

               
Conread position:
               
1-207
               

               
Cow position:
               
chr17:21718753-21718960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
29, 91
               

               
Conread position:
               
1-208
               

               
Cow position:
               
chr17:30501569-30501779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
29, 90
               

               
Conread position:
               
1-213
               

               
Cow position:
               
chr17:22128167-22127952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
9, 18
               

               
Conread position:
               
1-219
               

               
Cow position:
               
chr17:32332848-32333067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
88, 38
               

               
Conread position:
               
1-222
               

               
Cow position:
               
chr17:25616489-25616271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
29, 65
               

               
Conread position:
               
1-223
               

               
Cow position:
               
chr17:25875640-25875416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
9, 97
               

               
Conread position:
               
1-226
               

               
Cow position:
               
chr17:29084411-29084191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
207, 33
               

               
Conread position:
               
1-227
               

               
Cow position:
               
chr17:17035190-17034966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
29, 59
               

               
Conread position:
               
1-239
               

               
Cow position:
               
chr17:25473037-25473275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 84
               

               
Conread position:
               
1-240
               

               
Cow position:
               
chr17:21466013-21466259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
5, 236
               

               
Conread position:
               
1-241
               

               
Cow position:
               
chr17:21039800-21039560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 75
               

               
Conread position:
               
1-281
               

               
Cow position:
               
chr17:8815431-8815166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
29, 62
               

               
Conread position:
               
1-281
               

               
Cow position:
               
chr17:40276980-40276705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
207, 31
               

               
Conread position:
               
1-301
               

               
Cow position:
               
chr17:35051864-35051563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
29, 235
               

               
Conread position:
               
1-305
               

               
Cow position:
               
chr17:25126589-25126304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
9, 72
               

               
Conread position:
               
1-321
               

               
Cow position:
               
chr17:1025590-1025884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
29, 70
               

               
Conread position:
               
1-336
               

               
Cow position:
               
chr17:9824911-9824590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 75
               

               
Conread position:
               
1-355
               

               
Cow position:
               
chr17:25513874-25514221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 220
               

               
Conread position:
               
1-379
               

               
Cow position:
               
chr17:31480786-31481158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
29, 109
               

               
Conread position:
               
1-388
               

               
Cow position:
               
chr17:12946115-12946492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
29, 68
               

               
Conread position:
               
1-416
               

               
Cow position:
               
chr17:4105748-4106150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 31
               

               
Conread position:
               
1-416
               

               
Cow position:
               
chr17:4121483-4121886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 31
               

               
Conread position:
               
1-416
               

               
Cow position:
               
chr17:21959438-21959847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 224
               

               
Conread position:
               
1-419
               

               
Cow position:
               
chr17:12306161-12306563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
139, 17
               

               
Conread position:
               
1-420
               

               
Cow position:
               
chr17:12289166-12289583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
207, 233
               

               
Conread position:
               
1-422
               

               
Cow position:
               
chr17:26000364-25999946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
11, 103
               

               
Conread position:
               
1-424
               

               
Cow position:
               
chr17:12447158-12447571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 103
               

               
Conread position:
               
1-426
               

               
Cow position:
               
chr17:908983-908572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 72
               

               
Conread position:
               
1-426
               

               
Cow position:
               
chr17:6423998-6423586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 72
               

               
Conread position:
               
1-426
               

               
Cow position:
               
chr17:11101575-11101968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
29, 7
               

               
Conread position:
               
1-426
               

               
Cow position:
               
chr17:15333440-15333885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 12
               

               
Conread position:
               
1-426
               

               
Cow position:
               
chr17:17059662-17059265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 70
               

               
Conread position:
               
1-426
               

               
Cow position:
               
chr17:18720208-18720622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 55
               

               
Conread position:
               
1-426
               

               
Cow position:
               
chr17:21003587-21004005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 86
               

               
Conread position:
               
1-426
               

               
Cow position:
               
chr17:23063967-23063538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
9, 169
               

               
Conread position:
               
1-426
               

               
Cow position:
               
chr17:25189532-25189105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
9, 28
               

               
Conread position:
               
1-426
               

               
Cow position:
               
chr17:26818228-26818627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 79
               

               
Conread position:
               
1-426
               

               
Cow position:
               
chr17:38615207-38614782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
29, 229
               

               
Conread position:
               
1-442
               

               
Cow position:
               
chr17:13922726-13922283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 84
               

               
Conread position:
               
1-444
               

               
Cow position:
               
chr17:21972884-21973327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 11
               

               
Conread position:
               
2-139
               

               
Cow position:
               
chr17:4679965-4680104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
51, 28
               

               
Conread position:
               
2-201
               

               
Cow position:
               
chr17:21677134-21676933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
2-231
               

               
Cow position:
               
chr17:20071860-20072087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
201, 32
               

               
Conread position:
               
2-388
               

               
Cow position:
               
chr17:32027204-32027589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 221
               

               
Conread position:
               
2-426
               

               
Cow position:
               
chr17:24587866-24587444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 74
               

               
Conread position:
               
3-145
               

               
Cow position:
               
chr17:20782955-20783095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
27, 67
               

               
Conread position:
               
3-171
               

               
Cow position:
               
chr17:9260370-9260539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
27, 6
               

               
Conread position:
               
3-194
               

               
Cow position:
               
chr17:12963372-12963557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
28, 75
               

               
Conread position:
               
3-359
               

               
Cow position:
               
chr17:21325586-21325231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 234
               

               
Conread position:
               
3-406
               

               
Cow position:
               
chr17:3467993-3467615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 70
               

               
Conread position:
               
3-421
               

               
Cow position:
               
chr17:11397909-11397497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
27, 117
               

               
Conread position:
               
3-423
               

               
Cow position:
               
chr17:1634253-1634653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 6
               

               
Conread position:
               
3-426
               

               
Cow position:
               
chr17:5224624-5224229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
20, 77
               

               
Conread position:
               
4-126
               

               
Cow position:
               
chr17:20930544-20930420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
26, 75
               

               
Conread position:
               
4-187
               

               
Cow position:
               
chr17:30513770-30513948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
26, 42
               

               
Conread position:
               
4-197
               

               
Cow position:
               
chr17:10016518-10016326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
26, 85
               

               
Conread position:
               
4-226
               

               
Cow position:
               
chr17:41429350-41429579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
135, 21
               

               
Conread position:
               
4-309
               

               
Cow position:
               
chr17:18934497-18934205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
204, 67
               

               
Conread position:
               
4-393
               

               
Cow position:
               
chr17:30728748-30728385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 224
               

               
Conread position:
               
4-423
               

               
Cow position:
               
chr17:25612328-25611922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 66
               

               
Conread position:
               
4-426
               

               
Cow position:
               
chr17:11664336-11664765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 231
               

               
Conread position:
               
4-426
               

               
Cow position:
               
chr17:32418876-32419292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 75
               

               
Conread position:
               
4-426
               

               
Cow position:
               
chr17:36791365-36790965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
205, 30
               

               
Conread position:
               
4-443
               

               
Cow position:
               
chr17:32471549-32471987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 11
               

               
Conread position:
               
5-145
               

               
Cow position:
               
chr17:8809268-8809406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
25, 68
               

               
Conread position:
               
5-167
               

               
Cow position:
               
chr17:17782292-17782132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
5-171
               

               
Cow position:
               
chr17:30977256-30977093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
35, 64
               

               
Conread position:
               
5-175
               

               
Cow position:
               
chr17:21363624-21363450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
6, 0
               

               
Conread position:
               
5-180
               

               
Cow position:
               
chr17:20836330-20836155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
25, 93
               

               
Conread position:
               
5-191
               

               
Cow position:
               
chr17:22081283-22081463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
24, 82
               

               
Conread position:
               
5-195
               

               
Cow position:
               
chr17:39964118-39963926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
25, 112
               

               
Conread position:
               
5-197
               

               
Cow position:
               
chr17:26225268-26225074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
25, 152
               

               
Conread position:
               
5-208
               

               
Cow position:
               
chr17:10508194-10508398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
62, 96
               

               
Conread position:
               
5-214
               

               
Cow position:
               
chr17:25511482-25511274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
25, 74
               

               
Conread position:
               
5-215
               

               
Cow position:
               
chr17:946597-946385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
6, 74
               

               
Conread position:
               
5-215
               

               
Cow position:
               
chr17:27292214-27292429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
25, 116
               

               
Conread position:
               
5-215
               

               
Cow position:
               
chr17:40355501-40355286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
5-223
               

               
Cow position:
               
chr17:3389074-3388846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
24, 171
               

               
Conread position:
               
5-226
               

               
Cow position:
               
chr17:7810507-7810738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
5-226
               

               
Cow position:
               
chr17:21471947-21472162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
25, 134
               

               
Conread position:
               
5-226
               

               
Cow position:
               
chr17:22223954-22223716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
25, 82
               

               
Conread position:
               
5-226
               

               
Cow position:
               
chr17:24974183-24973958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
24, 72
               

               
Conread position:
               
5-226
               

               
Cow position:
               
chr17:42150628-42150408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
25, 73
               

               
Conread position:
               
5-235
               

               
Cow position:
               
chr17:9932071-9932293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
25, 65
               

               
Conread position:
               
5-236
               

               
Cow position:
               
chr17:43315050-43315279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
135, 146
               

               
Conread position:
               
5-242
               

               
Cow position:
               
chr17:37340791-37341037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
25, 73
               

               
Conread position:
               
5-283
               

               
Cow position:
               
chr17:1562551-1562817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
25, 76
               

               
Conread position:
               
5-288
               

               
Cow position:
               
chr17:33164579-33164848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
6, 94
               

               
Conread position:
               
5-300
               

               
Cow position:
               
chr17:25800644-25800925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
25, 63
               

               
Conread position:
               
5-321
               

               
Cow position:
               
chr17:24751152-24750853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
70, 29
               

               
Conread position:
               
5-321
               

               
Cow position:
               
chr17:34790825-34791130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
25, 82
               

               
Conread position:
               
5-324
               

               
Cow position:
               
chr17:39606662-39606362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
203, 29
               

               
Conread position:
               
5-328
               

               
Cow position:
               
chr17:3153328-3153642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 151
               

               
Conread position:
               
5-331
               

               
Cow position:
               
chr17:21806209-21806523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
25, 224
               

               
Conread position:
               
5-345
               

               
Cow position:
               
chr17:25342500-25342828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
25, 196
               

               
Conread position:
               
5-364
               

               
Cow position:
               
chr17:11831878-11832226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 58
               

               
Conread position:
               
5-382
               

               
Cow position:
               
chr17:32349302-32348949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
25, 5
               

               
Conread position:
               
5-387
               

               
Cow position:
               
chr17:30713586-30713219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
25, 126
               

               
Conread position:
               
5-391
               

               
Cow position:
               
chr17:6318628-6318991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 82
               

               
Conread position:
               
5-400
               

               
Cow position:
               
chr17:17410540-17410145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
24, 221
               

               
Conread position:
               
5-411
               

               
Cow position:
               
chr17:13243814-13244190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
24, 50
               

               
Conread position:
               
5-414
               

               
Cow position:
               
chr17:7143097-7142702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
25, 71
               

               
Conread position:
               
5-414
               

               
Cow position:
               
chr17:27058309-27058715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
25, 156
               

               
Conread position:
               
5-416
               

               
Cow position:
               
chr17:20092889-20093291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
25, 52
               

               
Conread position:
               
5-416
               

               
Cow position:
               
chr17:33933508-33933901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 83
               

               
Conread position:
               
5-420
               

               
Cow position:
               
chr17:24883330-24883736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 219
               

               
Conread position:
               
5-423
               

               
Cow position:
               
chr17:20932569-20932158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 41
               

               
Conread position:
               
5-423
               

               
Cow position:
               
chr17:24004613-24004223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 68
               

               
Conread position:
               
5-423
               

               
Cow position:
               
chr17:25128114-25128520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
25, 82
               

               
Conread position:
               
5-423
               

               
Cow position:
               
chr17:33275518-33275917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
5, 66
               

               
Conread position:
               
5-424
               

               
Cow position:
               
chr17:15102649-15103060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 217
               

               
Conread position:
               
5-426
               

               
Cow position:
               
chr17:1035354-1035775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
25, 209
               

               
Conread position:
               
5-426
               

               
Cow position:
               
chr17:5898284-5898699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
25, 168
               

               
Conread position:
               
5-426
               

               
Cow position:
               
chr17:8836711-8837123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 29
               

               
Conread position:
               
5-426
               

               
Cow position:
               
chr17:10458694-10459110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 50
               

               
Conread position:
               
5-426
               

               
Cow position:
               
chr17:11215653-11216057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 106
               

               
Conread position:
               
5-426
               

               
Cow position:
               
chr17:12325530-12325920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
26, 66
               

               
Conread position:
               
5-426
               

               
Cow position:
               
chr17:20157848-20157441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 164
               

               
Conread position:
               
5-426
               

               
Cow position:
               
chr17:21738625-21739058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
25, 223
               

               
Conread position:
               
5-426
               

               
Cow position:
               
chr17:24824486-24824078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 25
               

               
Conread position:
               
5-426
               

               
Cow position:
               
chr17:32989714-32989318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 34
               

               
Conread position:
               
5-426
               

               
Cow position:
               
chr17:32993386-32993788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 34
               

               
Conread position:
               
5-426
               

               
Cow position:
               
chr17:33793392-33793008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
203, 35
               

               
Conread position:
               
5-442
               

               
Cow position:
               
chr17:20022274-20022709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 82
               

               
Conread position:
               
6-193
               

               
Cow position:
               
chr17:9077974-9078170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
6-215
               

               
Cow position:
               
chr17:40312938-40312734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
24, 59
               

               
Conread position:
               
6-387
               

               
Cow position:
               
chr17:11962295-11962679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 104
               

               
Conread position:
               
6-406
               

               
Cow position:
               
chr17:24559532-24559145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
24, 201
               

               
Conread position:
               
6-426
               

               
Cow position:
               
chr17:22564417-22564009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 47
               

               
Conread position:
               
6-426
               

               
Cow position:
               
chr17:32278665-32279081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
24, 149
               

               
Conread position:
               
6-483
               

               
Cow position:
               
chr17:32280907-32280443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
24, 149
               

               
Conread position:
               
8-198
               

               
Cow position:
               
chr17:25348601-25348414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
24, 8
               

               
Conread position:
               
8-316
               

               
Cow position:
               
chr17:5372295-5372588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 62
               

               
Conread position:
               
9-175
               

               
Cow position:
               
chr17:19543996-19544163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
20, 83
               

               
Conread position:
               
9-191
               

               
Cow position:
               
chr17:7711672-7711490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
21, 71
               

               
Conread position:
               
9-195
               

               
Cow position:
               
chr17:7571342-7571152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
9-195
               

               
Cow position:
               
chr17:12215017-12215209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
21, 83
               

               
Conread position:
               
9-208
               

               
Cow position:
               
chr17:40412815-40412619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
21, 78
               

               
Conread position:
               
9-226
               

               
Cow position:
               
chr17:26448779-26448562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
21, 75
               

               
Conread position:
               
9-236
               

               
Cow position:
               
chr17:37815954-37816187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
21, 112
               

               
Conread position:
               
9-236
               

               
Cow position:
               
chr17:40673609-40673378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
21, 119
               

               
Conread position:
               
9-305
               

               
Cow position:
               
chr17:22051355-22051640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 78
               

               
Conread position:
               
9-326
               

               
Cow position:
               
chr17:40639183-40638881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
70, 119
               

               
Conread position:
               
9-329
               

               
Cow position:
               
chr17:12510749-12511047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
17, 37
               

               
Conread position:
               
9-356
               

               
Cow position:
               
chr17:11912269-11912596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 83
               

               
Conread position:
               
9-382
               

               
Cow position:
               
chr17:20884761-20884398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 25
               

               
Conread position:
               
9-387
               

               
Cow position:
               
chr17:31037141-31037510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 216
               

               
Conread position:
               
9-409
               

               
Cow position:
               
chr17:18146426-18146025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
21, 223
               

               
Conread position:
               
9-411
               

               
Cow position:
               
chr17:28468360-28467977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 79
               

               
Conread position:
               
9-422
               

               
Cow position:
               
chr17:20992802-20993209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 175
               

               
Conread position:
               
9-423
               

               
Cow position:
               
chr17:11296875-11296464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
22, 67
               

               
Conread position:
               
9-424
               

               
Cow position:
               
chr17:21114719-21115120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 69
               

               
Conread position:
               
9-426
               

               
Cow position:
               
chr17:5768130-5767740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
131, 25
               

               
Conread position:
               
9-426
               

               
Cow position:
               
chr17:11277791-11278206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
21, 112
               

               
Conread position:
               
9-426
               

               
Cow position:
               
chr17:15664912-15664495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 71
               

               
Conread position:
               
9-426
               

               
Cow position:
               
chr17:24786789-24787195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 80
               

               
Conread position:
               
9-426
               

               
Cow position:
               
chr17:25901444-25901021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 245
               

               
Conread position:
               
9-426
               

               
Cow position:
               
chr17:26231201-26230765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
21, 217
               

               
Conread position:
               
9-426
               

               
Cow position:
               
chr17:27429792-27429404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
16, 51
               

               
Conread position:
               
9-426
               

               
Cow position:
               
chr17:27795891-27795474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
21, 85
               

               
Conread position:
               
9-426
               

               
Cow position:
               
chr17:40741890-40741473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
21, 65
               

               
Conread position:
               
9-479
               

               
Cow position:
               
chr17:29714978-29715410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
366, 54
               

               
Conread position:
               
10-197
               

               
Cow position:
               
chr17:15728703-15728520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
100, 61
               

               
Conread position:
               
10-244
               

               
Cow position:
               
chr17:29356008-29356240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
20, 64
               

               
Conread position:
               
10-245
               

               
Cow position:
               
chr17:7959414-7959176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
21, 77
               

               
Conread position:
               
10-335
               

               
Cow position:
               
chr17:1469601-1469299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
20, 52
               

               
Conread position:
               
10-426
               

               
Cow position:
               
chr17:11618822-11618406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 114
               

               
Conread position:
               
10-426
               

               
Cow position:
               
chr17:33288423-33288828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 76
               

               
Conread position:
               
10-426
               

               
Cow position:
               
chr17:40772065-40771656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 82
               

               
Conread position:
               
11-145
               

               
Cow position:
               
chr17:34806432-34806568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
86, 14
               

               
Conread position:
               
11-188
               

               
Cow position:
               
chr17:2729683-2729856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
19, 131
               

               
Conread position:
               
11-426
               

               
Cow position:
               
chr17:1063403-1063015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
8, 31
               

               
Conread position:
               
13-167
               

               
Cow position:
               
chr17:43717108-43717261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
128, 21
               

               
Conread position:
               
13-237
               

               
Cow position:
               
chr17:17044103-17044326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
17, 60
               

               
Conread position:
               
13-276
               

               
Cow position:
               
chr17:24163266-24163018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
12, 53
               

               
Conread position:
               
13-353
               

               
Cow position:
               
chr17:36864855-36864535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
17, 60
               

               
Conread position:
               
13-426
               

               
Cow position:
               
chr17:32138184-32138574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 221
               

               
Conread position:
               
14-238
               

               
Cow position:
               
chr17:29995204-29995430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
16, 222
               

               
Conread position:
               
14-426
               

               
Cow position:
               
chr17:14033410-14033818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
16, 187
               

               
Conread position:
               
16-409
               

               
Cow position:
               
chr17:45296635-45296283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
123, 51
               

               
Conread position:
               
16-426
               

               
Cow position:
               
chr17:5422849-5423246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 53
               

               
Conread position:
               
16-426
               

               
Cow position:
               
chr17:9697454-9697875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 14
               

               
Conread position:
               
16-442
               

               
Cow position:
               
chr17:20848753-20848338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 167
               

               
Conread position:
               
16-445
               

               
Cow position:
               
chr17:12536245-12536661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 57
               

               
Conread position:
               
18-426
               

               
Cow position:
               
chr17:25815822-25815435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
12, 108
               

               
Conread position:
               
20-171
               

               
Cow position:
               
chr17:20881590-20881736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
20-216
               

               
Cow position:
               
chr17:24862680-24862485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
10, 52
               

               
Conread position:
               
20-231
               

               
Cow position:
               
chr17:23100997-23101207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
10, 46
               

               
Conread position:
               
20-282
               

               
Cow position:
               
chr17:12959327-12959080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
10, 54
               

               
Conread position:
               
20-420
               

               
Cow position:
               
chr17:17180270-17179868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
10, 30
               

               
Conread position:
               
20-426
               

               
Cow position:
               
chr17:24773901-24773509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 53
               

               
Conread position:
               
21-170
               

               
Cow position:
               
chr17:24757747-24757601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
9, 57
               

               
Conread position:
               
25-442
               

               
Cow position:
               
chr17:2810853-2810429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
12, 41
               

               
Conread position:
               
26-388
               

               
Cow position:
               
chr17:24490761-24490394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
56, 202
               

               
Conread position:
               
28-184
               

               
Cow position:
               
chr17:18775974-18776127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
81, 50
               

               
Conread position:
               
28-190
               

               
Cow position:
               
chr17:3387934-3387771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
42, 76
               

               
Conread position:
               
28-198
               

               
Cow position:
               
chr17:5027249-5027414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
28-215
               

               
Cow position:
               
chr17:25584459-25584270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
48, 93
               

               
Conread position:
               
28-216
               

               
Cow position:
               
chr17:26072543-26072734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
59, 91
               

               
Conread position:
               
28-240
               

               
Cow position:
               
chr17:18473378-18473168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
28-364
               

               
Cow position:
               
chr17:40852183-40851876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
10, 40
               

               
Conread position:
               
28-387
               

               
Cow position:
               
chr17:24928693-24928349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
50, 93
               

               
Conread position:
               
28-388
               

               
Cow position:
               
chr17:6329327-6328981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
302, 43
               

               
Conread position:
               
28-388
               

               
Cow position:
               
chr17:14025692-14026047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
50, 193
               

               
Conread position:
               
28-480
               

               
Cow position:
               
chr17:6566699-6566250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 92
               

               
Conread position:
               
31-304
               

               
Cow position:
               
chr17:25467197-25466920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
46, 203
               

               
Conread position:
               
32-208
               

               
Cow position:
               
chr17:1463117-1463295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
48, 87
               

               
Conread position:
               
32-227
               

               
Cow position:
               
chr17:9509783-9509978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
44, 7
               

               
Conread position:
               
32-281
               

               
Cow position:
               
chr17:26575011-26575255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
68, 42
               

               
Conread position:
               
32-426
               

               
Cow position:
               
chr17:24149398-24149003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
46, 189
               

               
Conread position:
               
38-376
               

               
Cow position:
               
chr17:25594489-25594822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
170, 29
               

               
Conread position:
               
38-426
               

               
Cow position:
               
chr17:28284827-28285202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 91
               

               
Conread position:
               
40-232
               

               
Cow position:
               
chr17:18766781-18766987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
49, 121
               

               
Conread position:
               
41-206
               

               
Cow position:
               
chr17:27303769-27303930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
41-423
               

               
Cow position:
               
chr17:18860537-18860890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
290, 30
               

               
Conread position:
               
41-426
               

               
Cow position:
               
chr17:30665474-30665098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 72
               

               
Conread position:
               
42-209
               

               
Cow position:
               
chr17:3178256-3178425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
44, 116
               

               
Conread position:
               
42-311
               

               
Cow position:
               
chr17:9940904-9940628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
38, 191
               

               
Conread position:
               
43-426
               

               
Cow position:
               
chr17:18108886-18109260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 67
               

               
Conread position:
               
48-426
               

               
Cow position:
               
chr17:18495324-18495684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 104
               

               
Conread position:
               
52-426
               

               
Cow position:
               
chr17:1492955-1493329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
24, 105
               

               
Conread position:
               
53-349
               

               
Cow position:
               
chr17:21489435-21489716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
155, 32
               

               
Conread position:
               
53-365
               

               
Cow position:
               
chr17:35338724-35339023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
35, 160
               

               
Conread position:
               
56-228
               

               
Cow position:
               
chr17:24554185-24554012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
33, 169
               

               
Conread position:
               
63-388
               

               
Cow position:
               
chr17:1060866-1061190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 22
               

               
Conread position:
               
65-342
               

               
Cow position:
               
chr17:5850169-5850431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
105, 124
               

               
Conread position:
               
65-352
               

               
Cow position:
               
chr17:23516762-23517037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
15, 39
               

               
Conread position:
               
66-201
               

               
Cow position:
               
chr17:969061-968927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
66-214
               

               
Cow position:
               
chr17:9713164-9713313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
142, 0
               

               
Conread position:
               
66-215
               

               
Cow position:
               
chr17:5743113-5743263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
75, 86
               

               
Conread position:
               
66-226
               

               
Cow position:
               
chr17:29075907-29076066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
142, 24
               

               
Conread position:
               
66-423
               

               
Cow position:
               
chr17:15340574-15340908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 164
               

               
Conread position:
               
66-426
               

               
Cow position:
               
chr17:1410059-1410417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 165
               

               
Conread position:
               
66-426
               

               
Cow position:
               
chr17:11280922-11281280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
187, 109
               

               
Conread position:
               
67-358
               

               
Cow position:
               
chr17:12880773-12880495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
16, 52
               

               
Conread position:
               
69-305
               

               
Cow position:
               
chr17:22016914-22017135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
139, 66
               

               
Conread position:
               
71-226
               

               
Cow position:
               
chr17:11306383-11306226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
18, 87
               

               
Conread position:
               
71-236
               

               
Cow position:
               
chr17:3097483-3097650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
108, 0
               

               
Conread position:
               
71-423
               

               
Cow position:
               
chr17:21335520-21335869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
139, 24
               

               
Conread position:
               
71-423
               

               
Cow position:
               
chr17:32273516-32273855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
295, 14
               

               
Conread position:
               
71-426
               

               
Cow position:
               
chr17:40331937-40331591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
210, 93
               

               
Conread position:
               
72-426
               

               
Cow position:
               
chr17:4225331-4225665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
25, 64
               

               
Conread position:
               
72-426
               

               
Cow position:
               
chr17:9117814-9117469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
308, 24
               

               
Conread position:
               
72-426
               

               
Cow position:
               
chr17:29157588-29157244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 90
               

               
Conread position:
               
72-426
               

               
Cow position:
               
chr17:32366465-32366110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
64, 128
               

               
Conread position:
               
72-426
               

               
Cow position:
               
chr17:35126877-35126540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 67
               

               
Conread position:
               
73-426
               

               
Cow position:
               
chr17:22806372-22806715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
68, 79
               

               
Conread position:
               
73-442
               

               
Cow position:
               
chr17:23246369-23246020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
306, 90
               

               
Conread position:
               
74-223
               

               
Cow position:
               
chr17:13236170-13236320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
47, 14
               

               
Conread position:
               
74-420
               

               
Cow position:
               
chr17:33410840-33411187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
132, 44
               

               
Conread position:
               
74-423
               

               
Cow position:
               
chr17:17406303-17405967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 11
               

               
Conread position:
               
74-423
               

               
Cow position:
               
chr17:24822031-24821695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
315, 101
               

               
Conread position:
               
74-426
               

               
Cow position:
               
chr17:8544475-8544132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
20, 42
               

               
Conread position:
               
74-426
               

               
Cow position:
               
chr17:9911927-9911589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
134, 90
               

               
Conread position:
               
74-426
               

               
Cow position:
               
chr17:24077571-24077228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 80
               

               
Conread position:
               
75-216
               

               
Cow position:
               
chr17:22056859-22057000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
70, 80
               

               
Conread position:
               
75-440
               

               
Cow position:
               
chr17:8079481-8079129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
65, 70
               

               
Conread position:
               
76-216
               

               
Cow position:
               
chr17:18109380-18109522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
76-222
               

               
Cow position:
               
chr17:35573920-35573773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
132, 0
               

               
Conread position:
               
78-352
               

               
Cow position:
               
chr17:265836-265581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
20, 48
               

               
Conread position:
               
78-384
               

               
Cow position:
               
chr17:14003991-14003694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
117, 150
               

               
Conread position:
               
78-426
               

               
Cow position:
               
chr17:38833209-38832868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
100, 107
               

               
Conread position:
               
79-387
               

               
Cow position:
               
chr17:27048320-27048029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
131, 78
               

               
Conread position:
               
79-407
               

               
Cow position:
               
chr17:39736337-39736030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
129, 15
               

               
Conread position:
               
79-426
               

               
Cow position:
               
chr17:18592606-18592266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
298, 8
               

               
Conread position:
               
79-426
               

               
Cow position:
               
chr17:36330794-36331140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
226, 32
               

               
Conread position:
               
79-440
               

               
Cow position:
               
chr17:5900534-5900191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
128, 157
               

               
Conread position:
               
80-388
               

               
Cow position:
               
chr17:3577701-3577411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 32
               

               
Conread position:
               
80-443
               

               
Cow position:
               
chr17:9746676-9746325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 72
               

               
Conread position:
               
81-313
               

               
Cow position:
               
chr17:16158652-16158435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
81-426
               

               
Cow position:
               
chr17:30718255-30718593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
60, 71
               

               
Conread position:
               
82-375
               

               
Cow position:
               
chr17:33657907-33658190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 44
               

               
Conread position:
               
83-291
               

               
Cow position:
               
chr17:28814331-28814533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
6, 143
               

               
Conread position:
               
83-363
               

               
Cow position:
               
chr17:21757980-21758252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
125, 142
               

               
Conread position:
               
83-370
               

               
Cow position:
               
chr17:10561794-10561517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
93, 7
               

               
Conread position:
               
83-382
               

               
Cow position:
               
chr17:39857546-39857268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
127, 38
               

               
Conread position:
               
83-426
               

               
Cow position:
               
chr17:21680940-21680594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
104, 86
               

               
Conread position:
               
85-420
               

               
Cow position:
               
chr17:21243631-21243955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 67
               

               
Conread position:
               
85-426
               

               
Cow position:
               
chr17:25032323-25032646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
188, 130
               

               
Conread position:
               
86-222
               

               
Cow position:
               
chr17:11478928-11478790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
86-423
               

               
Cow position:
               
chr17:20990032-20990365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 114
               

               
Conread position:
               
86-426
               

               
Cow position:
               
chr17:24580137-24580474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
52, 65
               

               
Conread position:
               
86-426
               

               
Cow position:
               
chr17:26765181-26764839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 133
               

               
Conread position:
               
86-442
               

               
Cow position:
               
chr17:43141551-43141908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
17, 31
               

               
Conread position:
               
86-443
               

               
Cow position:
               
chr17:21495529-21495181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
244, 71
               

               
Conread position:
               
87-372
               

               
Cow position:
               
chr17:25502267-25501995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
121, 83
               

               
Conread position:
               
88-426
               

               
Cow position:
               
chr17:8690296-8690614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
122, 52
               

               
Conread position:
               
90-356
               

               
Cow position:
               
chr17:3354036-3353782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
52, 61
               

               
Conread position:
               
90-360
               

               
Cow position:
               
chr17:32009286-32009540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
9, 55
               

               
Conread position:
               
90-376
               

               
Cow position:
               
chr17:32017738-32018000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
120, 77
               

               
Conread position:
               
90-501
               

               
Cow position:
               
chr17:12591328-12590912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 144
               

               
Conread position:
               
91-426
               

               
Cow position:
               
chr17:41891909-41892242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
286, 30
               

               
Conread position:
               
92-416
               

               
Cow position:
               
chr17:29363208-29363527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
17, 195
               

               
Conread position:
               
93-426
               

               
Cow position:
               
chr17:7760322-7760637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
119, 84
               

               
Conread position:
               
96-374
               

               
Cow position:
               
chr17:1040892-1040629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 19
               

               
Conread position:
               
96-426
               

               
Cow position:
               
chr17:40421819-40421494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
113, 130
               

               
Conread position:
               
99-423
               

               
Cow position:
               
chr17:11172471-11172786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
115, 22
               

               
Conread position:
               
102-422
               

               
Cow position:
               
chr17:3503723-3503416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
281, 87
               

               
Conread position:
               
104-339
               

               
Cow position:
               
chr17:11368710-11368932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
115, 47
               

               
Conread position:
               
108-372
               

               
Cow position:
               
chr17:23563659-23563904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
54, 95
               

               
Conread position:
               
110-371
               

               
Cow position:
               
chr17:23798414-23798168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
99, 11
               

               
Conread position:
               
114-426
               

               
Cow position:
               
chr17:38647191-38646890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 112
               

               
Conread position:
               
115-426
               

               
Cow position:
               
chr17:3782172-3781871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
94, 62
               

               
Conread position:
               
116-388
               

               
Cow position:
               
chr17:4968240-4967983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
122-387
               

               
Cow position:
               
chr17:14762000-14762249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
18, 30
               

               
Conread position:
               
127-329
               

               
Cow position:
               
chr17:21478805-21478994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
81, 42
               

               
Conread position:
               
129-388
               

               
Cow position:
               
chr17:1275638-1275393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
209, 40
               

               
Conread position:
               
132-423
               

               
Cow position:
               
chr17:25541705-25541984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
255, 82
               

               
Conread position:
               
137-420
               

               
Cow position:
               
chr17:21917766-21918042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
194, 61
               

               
Conread position:
               
153-419
               

               
Cow position:
               
chr17:20870007-20870266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
30, 47
               

               
Conread position:
               
158-426
               

               
Cow position:
               
chr17:12059007-12059265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
52, 27
               

               
Conread position:
               
161-359
               

               
Cow position:
               
chr17:7654369-7654557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
48, 65
               

               
Conread position:
               
170-388
               

               
Cow position:
               
chr17:23879747-23879953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
55, 32
               

               
Conread position:
               
172-388
               

               
Cow position:
               
chr17:10510585-10510789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
180-424
               

               
Cow position:
               
chr17:27765336-27765109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
30, 7
               

               
Conread position:
               
183-426
               

               
Cow position:
               
chr17:33290749-33290985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
162, 24
               

               
Conread position:
               
226-422
               

               
Cow position:
               
chr17:25590203-25590406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
228-378
               

               
Cow position:
               
chr17:26162400-26162547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
80, 10
               

               
Conread position:
               
234-426
               

               
Cow position:
               
chr17:33926103-33926299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
135, 54
               

               
Conread position:
               
234-442
               

               
Cow position:
               
chr17:5041656-5041867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
21, 75
               

               
Conread position:
               
240-379
               

               
Cow position:
               
chr17:6848821-6848683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
109, 29
               

               
Conread position:
               
245-388
               

               
Cow position:
               
chr17:27819315-27819172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
111, 77
               

               
Conread position:
               
245-388
               

               
Cow position:
               
chr17:28359852-28359714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
245-420
               

               
Cow position:
               
chr17:20126625-20126445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
113, 83
               

               
Conread position:
               
245-426
               

               
Cow position:
               
chr17:2079773-2079586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
111, 0
               

               
Conread position:
               
246-426
               

               
Cow position:
               
chr17:33052870-33052689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
84, 19
               

               
Conread position:
               
248-423
               

               
Cow position:
               
chr17:26183232-26183051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
87, 118
               

               
Conread position:
               
250-387
               

               
Cow position:
               
chr17:30204664-30204526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
250-388
               

               
Cow position:
               
chr17:4824503-4824366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
132, 0
               

               
Conread position:
               
250-388
               

               
Cow position:
               
chr17:23101201-23101338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
98, 73
               

               
Conread position:
               
250-388
               

               
Cow position:
               
chr17:37414888-37415027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
250-423
               

               
Cow position:
               
chr17:32950281-32950101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
250-426
               

               
Cow position:
               
chr17:3306874-3306693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
127, 0
               

               
Conread position:
               
250-426
               

               
Cow position:
               
chr17:8279701-8279883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
250-426
               

               
Cow position:
               
chr17:9778255-9778077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
250-426
               

               
Cow position:
               
chr17:20234236-20234053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
86, 98
               

               
Conread position:
               
250-426
               

               
Cow position:
               
chr17:20780518-20780336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
107, 0
               

               
Conread position:
               
250-426
               

               
Cow position:
               
chr17:35991105-35990922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
52, 82
               

               
Conread position:
               
250-427
               

               
Cow position:
               
chr17:18824800-18824615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
52, 82
               

               
Conread position:
               
250-511
               

               
Cow position:
               
chr17:20912892-20912640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
82, 20
               

               
Conread position:
               
251-388
               

               
Cow position:
               
chr17:28847660-28847795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
52, 73
               

               
Conread position:
               
251-423
               

               
Cow position:
               
chr17:7810738-7810910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
140, 41
               

               
Conread position:
               
251-423
               

               
Cow position:
               
chr17:20072084-20072246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
132, 42
               

               
Conread position:
               
251-423
               

               
Cow position:
               
chr17:34207812-34207991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
113, 0
               

               
Conread position:
               
251-426
               

               
Cow position:
               
chr17:4436226-4436405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
126, 96
               

               
Conread position:
               
251-426
               

               
Cow position:
               
chr17:12216066-12216251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
251-426
               

               
Cow position:
               
chr17:21363412-21363233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
83, 15
               

               
Conread position:
               
251-426
               

               
Cow position:
               
chr17:24973958-24973777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
107, 0
               

               
Conread position:
               
251-426
               

               
Cow position:
               
chr17:26085041-26084860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
251-426
               

               
Cow position:
               
chr17:33999042-33999218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
131, 60
               

               
Conread position:
               
251-442
               

               
Cow position:
               
chr17:21017803-21017602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
126, 72
               

               
Conread position:
               
251-465
               

               
Cow position:
               
chr17:21207127-21207343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
134, 36
               

               
Conread position:
               
252-387
               

               
Cow position:
               
chr17:11921276-11921412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
252-387
               

               
Cow position:
               
chr17:14060769-14060906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
252-388
               

               
Cow position:
               
chr17:22032685-22032821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
252-388
               

               
Cow position:
               
chr17:27306164-27306031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
79, 96
               

               
Conread position:
               
252-404
               

               
Cow position:
               
chr17:267580-267736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
84, 22
               

               
Conread position:
               
252-410
               

               
Cow position:
               
chr17:40792225-40792065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
129, 17
               

               
Conread position:
               
252-411
               

               
Cow position:
               
chr17:38613252-38613087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
252-415
               

               
Cow position:
               
chr17:38362981-38363137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
131, 106
               

               
Conread position:
               
252-426
               

               
Cow position:
               
chr17:1295564-1295745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
252-426
               

               
Cow position:
               
chr17:2034535-2034371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
134, 49
               

               
Conread position:
               
252-426
               

               
Cow position:
               
chr17:5895905-5896085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
78, 55
               

               
Conread position:
               
252-426
               

               
Cow position:
               
chr17:11056365-11056548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
252-426
               

               
Cow position:
               
chr17:21312805-21312979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
110, 127
               

               
Conread position:
               
252-426
               

               
Cow position:
               
chr17:21628485-21628308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
77, 130
               

               
Conread position:
               
252-426
               

               
Cow position:
               
chr17:30539247-30539421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
131, 96
               

               
Conread position:
               
252-426
               

               
Cow position:
               
chr17:32651625-32651442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
252-426
               

               
Cow position:
               
chr17:35185046-35184861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
58, 36
               

               
Conread position:
               
252-426
               

               
Cow position:
               
chr17:41290017-41290192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
123, 36
               

               
Conread position:
               
252-426
               

               
Cow position:
               
chr17:42347221-42347395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
126, 19
               

               
Conread position:
               
252-442
               

               
Cow position:
               
chr17:31231109-31231306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
140, 24
               

               
Conread position:
               
252-443
               

               
Cow position:
               
chr17:15067622-15067819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
56, 41
               

               
Conread position:
               
252-443
               

               
Cow position:
               
chr17:24550182-24549976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
252-469
               

               
Cow position:
               
chr17:35311432-35311200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
70, 226
               

               
Conread position:
               
253-388
               

               
Cow position:
               
chr17:24554011-24553877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
73, 47
               

               
Conread position:
               
253-442
               

               
Cow position:
               
chr17:20839556-20839750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
82, 178
               

               
Conread position:
               
254-362
               

               
Cow position:
               
chr17:9936036-9936142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
110
               

               
Alignm identity:
               
91
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
77, 60
               

               
Conread position:
               
254-416
               

               
Cow position:
               
chr17:23337013-23337177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
132, 83
               

               
Conread position:
               
254-421
               

               
Cow position:
               
chr17:4606960-4606798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
254-425
               

               
Cow position:
               
chr17:44561077-44561257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
24, 70
               

               
Conread position:
               
254-426
               

               
Cow position:
               
chr17:3471424-3471247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
254-426
               

               
Cow position:
               
chr17:10446922-10446742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
78, 53
               

               
Conread position:
               
254-426
               

               
Cow position:
               
chr17:13143687-13143864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
129, 0
               

               
Conread position:
               
254-426
               

               
Cow position:
               
chr17:34595944-34595765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
123, 59
               

               
Conread position:
               
254-426
               

               
Cow position:
               
chr17:41029958-41029779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
254-442
               

               
Cow position:
               
chr17:28540033-28539845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
76, 147
               

               
Conread position:
               
254-443
               

               
Cow position:
               
chr17:24761224-24761419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
108, 0
               

               
Conread position:
               
256-416
               

               
Cow position:
               
chr17:979154-979317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
256-423
               

               
Cow position:
               
chr17:30734291-30734450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
82, 45
               

               
Conread position:
               
256-426
               

               
Cow position:
               
chr17:6624258-6624084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
78, 31
               

               
Conread position:
               
257-426
               

               
Cow position:
               
chr17:21031783-21031611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
258-388
               

               
Cow position:
               
chr17:27667188-27667321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
261-426
               

               
Cow position:
               
chr17:29040469-29040639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
70, 60
               

               
Conread position:
               
261-426
               

               
Cow position:
               
chr17:37163524-37163701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
43, 52
               

               
Conread position:
               
263-426
               

               
Cow position:
               
chr17:34316714-34316883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
127, 27
               

               
Conread position:
               
265-424
               

               
Cow position:
               
chr17:20835589-20835421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
120, 0
               

               
Conread position:
               
273-421
               

               
Cow position:
               
chr17:3498679-3498833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
61, 87
               

               
Conread position:
               
274-388
               

               
Cow position:
               
chr17:32554041-32554153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
115
               

               
Alignm identity:
               
91
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
274-426
               

               
Cow position:
               
chr17:3182601-3182759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
112, 0
               

               
Conread position:
               
275-443
               

               
Cow position:
               
chr17:43717332-43717506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
106, 95
               

               
Conread position:
               
276-445
               

               
Cow position:
               
chr17:27679255-27679440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
278-423
               

               
Cow position:
               
chr17:1358822-1358970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
84, 7
               

               
Conread position:
               
279-426
               

               
Cow position:
               
chr17:3442690-3442842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
104, 0
               

               
Conread position:
               
280-442
               

               
Cow position:
               
chr17:25078024-25078185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
21, 133
               

               
Conread position:
               
285-426
               

               
Cow position:
               
chr17:21710478-21710331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
102, 57
               

               
Conread position:
               
285-428
               

               
Cow position:
               
chr17:20083541-20083688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
46, 70
               

               
Conread position:
               
295-426
               

               
Cow position:
               
chr17:16117460-16117602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
297-426
               

               
Cow position:
               
chr17:20269562-20269428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
92, 0
               
Show alignments to all cow chromosomes.