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Cow genome map

           
Conread name:
           
LyN1-MLN01E020019
        

               
Conread position:
               
1-128
               

               
Cow position:
               
chr19:30148291-30148419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
83, 31
               

               
Conread position:
               
1-133
               

               
Cow position:
               
chr19:37646569-37646701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
29, 79
               

               
Conread position:
               
1-169
               

               
Cow position:
               
chr19:27968502-27968673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
29, 59
               

               
Conread position:
               
1-171
               

               
Cow position:
               
chr19:17260101-17259928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
1-171
               

               
Cow position:
               
chr19:22414076-22414245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
29, 9
               

               
Conread position:
               
1-174
               

               
Cow position:
               
chr19:14588598-14588423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
9, 28
               

               
Conread position:
               
1-174
               

               
Cow position:
               
chr19:28137339-28137172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
29, 82
               

               
Conread position:
               
1-182
               

               
Cow position:
               
chr19:2358270-2358082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
29, 140
               

               
Conread position:
               
1-195
               

               
Cow position:
               
chr19:12760907-12761106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
1-196
               

               
Cow position:
               
chr19:26269033-26269238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
1-201
               

               
Cow position:
               
chr19:52356444-52356243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
29, 91
               

               
Conread position:
               
1-201
               

               
Cow position:
               
chr19:53189658-53189867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
1-208
               

               
Cow position:
               
chr19:12279918-12279714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
1-214
               

               
Cow position:
               
chr19:53378892-53378679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
88, 31
               

               
Conread position:
               
1-215
               

               
Cow position:
               
chr19:21176553-21176765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
7, 87
               

               
Conread position:
               
1-215
               

               
Cow position:
               
chr19:30007378-30007168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
9, 34
               

               
Conread position:
               
1-216
               

               
Cow position:
               
chr19:44572280-44572058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
29, 178
               

               
Conread position:
               
1-222
               

               
Cow position:
               
chr19:15853118-15852905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
29, 86
               

               
Conread position:
               
1-223
               

               
Cow position:
               
chr19:39795382-39795158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
9, 84
               

               
Conread position:
               
1-226
               

               
Cow position:
               
chr19:4587536-4587773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
88, 33
               

               
Conread position:
               
1-242
               

               
Cow position:
               
chr19:23088173-23087935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
29, 72
               

               
Conread position:
               
1-300
               

               
Cow position:
               
chr19:38411062-38410774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
9, 220
               

               
Conread position:
               
1-311
               

               
Cow position:
               
chr19:7147864-7148170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
29, 135
               

               
Conread position:
               
1-331
               

               
Cow position:
               
chr19:2220881-2221204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
29, 8
               

               
Conread position:
               
1-339
               

               
Cow position:
               
chr19:28924953-28924625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
5, 88
               

               
Conread position:
               
1-361
               

               
Cow position:
               
chr19:41497805-41498161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
9, 28
               

               
Conread position:
               
1-377
               

               
Cow position:
               
chr19:23378868-23378479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 8
               

               
Conread position:
               
1-388
               

               
Cow position:
               
chr19:51285829-51285448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
29, 40
               

               
Conread position:
               
1-388
               

               
Cow position:
               
chr19:52456562-52456940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
29, 59
               

               
Conread position:
               
1-423
               

               
Cow position:
               
chr19:29626092-29625681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 77
               

               
Conread position:
               
1-423
               

               
Cow position:
               
chr19:43702495-43702925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
66, 167
               

               
Conread position:
               
1-424
               

               
Cow position:
               
chr19:16621166-16621579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 77
               

               
Conread position:
               
1-426
               

               
Cow position:
               
chr19:5115700-5116093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
29, 84
               

               
Conread position:
               
1-426
               

               
Cow position:
               
chr19:17664840-17664414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
29, 236
               

               
Conread position:
               
1-426
               

               
Cow position:
               
chr19:22765804-22765391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
264, 33
               

               
Conread position:
               
1-426
               

               
Cow position:
               
chr19:29368587-29368173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 76
               

               
Conread position:
               
1-426
               

               
Cow position:
               
chr19:36060146-36059706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 255
               

               
Conread position:
               
1-426
               

               
Cow position:
               
chr19:36845437-36845022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
29, 51
               

               
Conread position:
               
1-426
               

               
Cow position:
               
chr19:38393000-38392572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
29, 175
               

               
Conread position:
               
1-426
               

               
Cow position:
               
chr19:39751664-39751255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 73
               

               
Conread position:
               
1-426
               

               
Cow position:
               
chr19:48723225-48722799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 193
               

               
Conread position:
               
1-426
               

               
Cow position:
               
chr19:53371700-53372122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
11, 128
               

               
Conread position:
               
1-430
               

               
Cow position:
               
chr19:7668886-7668476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 8
               

               
Conread position:
               
1-430
               

               
Cow position:
               
chr19:47671926-47671522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 70
               

               
Conread position:
               
1-442
               

               
Cow position:
               
chr19:55957374-55957808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
9, 184
               

               
Conread position:
               
2-223
               

               
Cow position:
               
chr19:47184889-47185113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
28, 164
               

               
Conread position:
               
2-301
               

               
Cow position:
               
chr19:55583727-55583432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
28, 233
               

               
Conread position:
               
2-443
               

               
Cow position:
               
chr19:43413970-43413536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 71
               

               
Conread position:
               
3-137
               

               
Cow position:
               
chr19:22838451-22838313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
27, 104
               

               
Conread position:
               
3-139
               

               
Cow position:
               
chr19:53086800-53086661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
3-163
               

               
Cow position:
               
chr19:24068091-24068255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
3-171
               

               
Cow position:
               
chr19:22871066-22871234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
26, 77
               

               
Conread position:
               
3-180
               

               
Cow position:
               
chr19:46160206-46160035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
109, 12
               

               
Conread position:
               
3-208
               

               
Cow position:
               
chr19:8185395-8185187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
3-209
               

               
Cow position:
               
chr19:52728801-52728594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
27, 82
               

               
Conread position:
               
3-221
               

               
Cow position:
               
chr19:41497453-41497674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
27, 15
               

               
Conread position:
               
3-226
               

               
Cow position:
               
chr19:18054069-18054291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
26, 70
               

               
Conread position:
               
3-248
               

               
Cow position:
               
chr19:10930237-10930475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
205, 6
               

               
Conread position:
               
3-315
               

               
Cow position:
               
chr19:19549366-19549658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
27, 6
               

               
Conread position:
               
3-350
               

               
Cow position:
               
chr19:15091955-15092272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
3-376
               

               
Cow position:
               
chr19:38500346-38499997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 71
               

               
Conread position:
               
3-387
               

               
Cow position:
               
chr19:24759697-24760067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 70
               

               
Conread position:
               
3-388
               

               
Cow position:
               
chr19:25769864-25769482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
27, 156
               

               
Conread position:
               
3-423
               

               
Cow position:
               
chr19:3621619-3621206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 83
               

               
Conread position:
               
3-423
               

               
Cow position:
               
chr19:46455031-46454627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 70
               

               
Conread position:
               
3-426
               

               
Cow position:
               
chr19:10213856-10213445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 10
               

               
Conread position:
               
3-426
               

               
Cow position:
               
chr19:21199340-21198901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 234
               

               
Conread position:
               
3-426
               

               
Cow position:
               
chr19:24358070-24358450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
375, 27
               

               
Conread position:
               
3-426
               

               
Cow position:
               
chr19:30232900-30232503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 31
               

               
Conread position:
               
4-145
               

               
Cow position:
               
chr19:41388949-41388809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
26, 82
               

               
Conread position:
               
4-174
               

               
Cow position:
               
chr19:21790921-21790751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
26, 9
               

               
Conread position:
               
4-208
               

               
Cow position:
               
chr19:11646753-11646551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
30, 56
               

               
Conread position:
               
4-426
               

               
Cow position:
               
chr19:3811833-3812241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
25, 83
               

               
Conread position:
               
4-426
               

               
Cow position:
               
chr19:10186696-10186274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 83
               

               
Conread position:
               
4-426
               

               
Cow position:
               
chr19:55590424-55590007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
26, 179
               

               
Conread position:
               
4-442
               

               
Cow position:
               
chr19:25726696-25727121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 26
               

               
Conread position:
               
5-134
               

               
Cow position:
               
chr19:49959057-49958928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
25, 11
               

               
Conread position:
               
5-145
               

               
Cow position:
               
chr19:12130804-12130947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
5-145
               

               
Cow position:
               
chr19:18050978-18051116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
5-167
               

               
Cow position:
               
chr19:14596883-14596714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
25, 128
               

               
Conread position:
               
5-169
               

               
Cow position:
               
chr19:32938047-32937885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
24, 78
               

               
Conread position:
               
5-170
               

               
Cow position:
               
chr19:4602508-4602672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
25, 55
               

               
Conread position:
               
5-170
               

               
Cow position:
               
chr19:49409513-49409671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
5-172
               

               
Cow position:
               
chr19:10385377-10385546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
7, 77
               

               
Conread position:
               
5-174
               

               
Cow position:
               
chr19:14823440-14823274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
28, 37
               

               
Conread position:
               
5-175
               

               
Cow position:
               
chr19:47727234-47727400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
25, 137
               

               
Conread position:
               
5-189
               

               
Cow position:
               
chr19:23559573-23559385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
5-197
               

               
Cow position:
               
chr19:36978459-36978262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
25, 117
               

               
Conread position:
               
5-201
               

               
Cow position:
               
chr19:11816534-11816732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
7, 73
               

               
Conread position:
               
5-201
               

               
Cow position:
               
chr19:13996237-13996438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
5-208
               

               
Cow position:
               
chr19:11194576-11194778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
25, 59
               

               
Conread position:
               
5-208
               

               
Cow position:
               
chr19:24693192-24692992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
5-208
               

               
Cow position:
               
chr19:49290270-49290470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
25, 75
               

               
Conread position:
               
5-215
               

               
Cow position:
               
chr19:26167727-26167936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
203, 43
               

               
Conread position:
               
5-215
               

               
Cow position:
               
chr19:35246133-35245918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
25, 124
               

               
Conread position:
               
5-216
               

               
Cow position:
               
chr19:37067321-37067115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
25, 87
               

               
Conread position:
               
5-216
               

               
Cow position:
               
chr19:39758709-39758498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
68, 35
               

               
Conread position:
               
5-221
               

               
Cow position:
               
chr19:24005839-24005625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
25, 14
               

               
Conread position:
               
5-222
               

               
Cow position:
               
chr19:10908813-10908609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
24, 83
               

               
Conread position:
               
5-223
               

               
Cow position:
               
chr19:19489631-19489864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
25, 18
               

               
Conread position:
               
5-226
               

               
Cow position:
               
chr19:10238924-10238702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
25, 68
               

               
Conread position:
               
5-226
               

               
Cow position:
               
chr19:11559847-11560076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
5-226
               

               
Cow position:
               
chr19:38732326-38732104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
25, 82
               

               
Conread position:
               
5-236
               

               
Cow position:
               
chr19:28810128-28810362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
25, 81
               

               
Conread position:
               
5-243
               

               
Cow position:
               
chr19:37466873-37467115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 76
               

               
Conread position:
               
5-290
               

               
Cow position:
               
chr19:34420597-34420328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
25, 87
               

               
Conread position:
               
5-292
               

               
Cow position:
               
chr19:12052659-12052934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
25, 147
               

               
Conread position:
               
5-292
               

               
Cow position:
               
chr19:12067932-12067657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
25, 147
               

               
Conread position:
               
5-300
               

               
Cow position:
               
chr19:40126977-40127261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
25, 199
               

               
Conread position:
               
5-333
               

               
Cow position:
               
chr19:52187671-52187366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
25, 5
               

               
Conread position:
               
5-341
               

               
Cow position:
               
chr19:1791506-1791849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
28, 219
               

               
Conread position:
               
5-343
               

               
Cow position:
               
chr19:25035688-25035348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
25, 214
               

               
Conread position:
               
5-354
               

               
Cow position:
               
chr19:52158730-52158386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 134
               

               
Conread position:
               
5-360
               

               
Cow position:
               
chr19:46094439-46094794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
25, 234
               

               
Conread position:
               
5-387
               

               
Cow position:
               
chr19:33033256-33033624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 71
               

               
Conread position:
               
5-388
               

               
Cow position:
               
chr19:5185070-5185429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 82
               

               
Conread position:
               
5-411
               

               
Cow position:
               
chr19:11376233-11376616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 60
               

               
Conread position:
               
5-415
               

               
Cow position:
               
chr19:22043169-22043558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 91
               

               
Conread position:
               
5-416
               

               
Cow position:
               
chr19:17972081-17972475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
373, 11
               

               
Conread position:
               
5-416
               

               
Cow position:
               
chr19:24137453-24137042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 29
               

               
Conread position:
               
5-419
               

               
Cow position:
               
chr19:51620989-51621402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
24, 202
               

               
Conread position:
               
5-423
               

               
Cow position:
               
chr19:14253823-14253411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
25, 212
               

               
Conread position:
               
5-423
               

               
Cow position:
               
chr19:42695177-42694765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 68
               

               
Conread position:
               
5-426
               

               
Cow position:
               
chr19:2577748-2577350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
24, 166
               

               
Conread position:
               
5-426
               

               
Cow position:
               
chr19:6417796-6417373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 75
               

               
Conread position:
               
5-426
               

               
Cow position:
               
chr19:10081276-10080843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 234
               

               
Conread position:
               
5-426
               

               
Cow position:
               
chr19:24145209-24144791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
129, 66
               

               
Conread position:
               
5-426
               

               
Cow position:
               
chr19:25835149-25835582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 61
               

               
Conread position:
               
5-426
               

               
Cow position:
               
chr19:39622597-39623012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
25, 16
               

               
Conread position:
               
5-426
               

               
Cow position:
               
chr19:41024409-41024003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 73
               

               
Conread position:
               
5-426
               

               
Cow position:
               
chr19:43058726-43058309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
25, 129
               

               
Conread position:
               
5-426
               

               
Cow position:
               
chr19:50562871-50562458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
25, 101
               

               
Conread position:
               
5-426
               

               
Cow position:
               
chr19:55247821-55247400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
25, 86
               

               
Conread position:
               
5-434
               

               
Cow position:
               
chr19:43035431-43035008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
25, 202
               

               
Conread position:
               
5-442
               

               
Cow position:
               
chr19:15887128-15887566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 55
               

               
Conread position:
               
5-442
               

               
Cow position:
               
chr19:55951976-55952388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
203, 29
               

               
Conread position:
               
5-445
               

               
Cow position:
               
chr19:30471169-30471585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
25, 68
               

               
Conread position:
               
5-457
               

               
Cow position:
               
chr19:6532062-6531635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 68
               

               
Conread position:
               
5-477
               

               
Cow position:
               
chr19:11191433-11191896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 75
               

               
Conread position:
               
6-208
               

               
Cow position:
               
chr19:25832013-25832215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
24, 79
               

               
Conread position:
               
6-221
               

               
Cow position:
               
chr19:24062461-24062247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
24, 67
               

               
Conread position:
               
6-324
               

               
Cow position:
               
chr19:14631854-14632154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 74
               

               
Conread position:
               
9-167
               

               
Cow position:
               
chr19:6855101-6854943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
21, 67
               

               
Conread position:
               
9-170
               

               
Cow position:
               
chr19:4485964-4486128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
21, 41
               

               
Conread position:
               
9-171
               

               
Cow position:
               
chr19:20694047-20693891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
21, 64
               

               
Conread position:
               
9-171
               

               
Cow position:
               
chr19:46822893-46822730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
20, 116
               

               
Conread position:
               
9-180
               

               
Cow position:
               
chr19:12264140-12263974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
21, 61
               

               
Conread position:
               
9-181
               

               
Cow position:
               
chr19:7864239-7864068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
21, 69
               

               
Conread position:
               
9-186
               

               
Cow position:
               
chr19:35623577-35623400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
21, 137
               

               
Conread position:
               
9-186
               

               
Cow position:
               
chr19:39698471-39698292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
9-195
               

               
Cow position:
               
chr19:15076007-15076203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
9-222
               

               
Cow position:
               
chr19:34654426-34654641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
21, 157
               

               
Conread position:
               
9-223
               

               
Cow position:
               
chr19:49221438-49221653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
21, 78
               

               
Conread position:
               
9-225
               

               
Cow position:
               
chr19:10538374-10538585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
21, 71
               

               
Conread position:
               
9-231
               

               
Cow position:
               
chr19:5406685-5406460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
21, 60
               

               
Conread position:
               
9-236
               

               
Cow position:
               
chr19:23756567-23756787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
21, 64
               

               
Conread position:
               
9-240
               

               
Cow position:
               
chr19:34757808-34758052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
9-241
               

               
Cow position:
               
chr19:43373232-43372991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
21, 226
               

               
Conread position:
               
9-305
               

               
Cow position:
               
chr19:8965455-8965163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
21, 168
               

               
Conread position:
               
9-306
               

               
Cow position:
               
chr19:3497763-3498054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
21, 163
               

               
Conread position:
               
9-362
               

               
Cow position:
               
chr19:11724335-11724674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
21, 113
               

               
Conread position:
               
9-374
               

               
Cow position:
               
chr19:52750575-52750929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
196, 220
               

               
Conread position:
               
9-376
               

               
Cow position:
               
chr19:34288199-34287854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 78
               

               
Conread position:
               
9-388
               

               
Cow position:
               
chr19:729564-729918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
59, 25
               

               
Conread position:
               
9-388
               

               
Cow position:
               
chr19:20661228-20661595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 178
               

               
Conread position:
               
9-388
               

               
Cow position:
               
chr19:23784240-23784580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
12, 66
               

               
Conread position:
               
9-402
               

               
Cow position:
               
chr19:22449733-22450134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
21, 219
               

               
Conread position:
               
9-410
               

               
Cow position:
               
chr19:32505924-32506320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
20, 200
               

               
Conread position:
               
9-417
               

               
Cow position:
               
chr19:34166552-34166147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 41
               

               
Conread position:
               
9-424
               

               
Cow position:
               
chr19:7053162-7053557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
364, 28
               

               
Conread position:
               
9-425
               

               
Cow position:
               
chr19:7637051-7637461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 88
               

               
Conread position:
               
9-426
               

               
Cow position:
               
chr19:23304305-23304720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 186
               

               
Conread position:
               
9-426
               

               
Cow position:
               
chr19:38339791-38340202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
21, 45
               

               
Conread position:
               
9-426
               

               
Cow position:
               
chr19:39576390-39576796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 74
               

               
Conread position:
               
9-426
               

               
Cow position:
               
chr19:52381707-52381306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
59, 32
               

               
Conread position:
               
9-442
               

               
Cow position:
               
chr19:8128492-8128072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
21, 228
               

               
Conread position:
               
9-445
               

               
Cow position:
               
chr19:5912773-5913198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
21, 171
               

               
Conread position:
               
10-129
               

               
Cow position:
               
chr19:10177760-10177641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
122
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
20, 68
               

               
Conread position:
               
10-172
               

               
Cow position:
               
chr19:49683682-49683845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
73, 20
               

               
Conread position:
               
10-198
               

               
Cow position:
               
chr19:5521975-5522161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
19, 63
               

               
Conread position:
               
10-345
               

               
Cow position:
               
chr19:13121103-13121414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
20, 63
               

               
Conread position:
               
10-387
               

               
Cow position:
               
chr19:53623752-53623380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
19, 152
               

               
Conread position:
               
10-423
               

               
Cow position:
               
chr19:8864926-8864526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
20, 115
               

               
Conread position:
               
10-426
               

               
Cow position:
               
chr19:13130047-13129656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 49
               

               
Conread position:
               
11-145
               

               
Cow position:
               
chr19:19174696-19174565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
11-164
               

               
Cow position:
               
chr19:25572954-25572799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
87, 19
               

               
Conread position:
               
11-208
               

               
Cow position:
               
chr19:39981921-39981720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
19, 144
               

               
Conread position:
               
11-226
               

               
Cow position:
               
chr19:44838758-44838961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
18, 73
               

               
Conread position:
               
11-421
               

               
Cow position:
               
chr19:15067827-15068214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 61
               

               
Conread position:
               
11-424
               

               
Cow position:
               
chr19:33903244-33903646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 81
               

               
Conread position:
               
11-426
               

               
Cow position:
               
chr19:26975889-26976274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
19, 76
               

               
Conread position:
               
12-186
               

               
Cow position:
               
chr19:24220325-24220494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
18, 130
               

               
Conread position:
               
12-415
               

               
Cow position:
               
chr19:3245874-3246261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
18, 140
               

               
Conread position:
               
13-226
               

               
Cow position:
               
chr19:23889306-23889522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
17, 76
               

               
Conread position:
               
13-241
               

               
Cow position:
               
chr19:6344262-6344023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
17, 135
               

               
Conread position:
               
13-416
               

               
Cow position:
               
chr19:16096373-16096768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 86
               

               
Conread position:
               
14-387
               

               
Cow position:
               
chr19:25526458-25526103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
16, 57
               

               
Conread position:
               
15-233
               

               
Cow position:
               
chr19:34608021-34608239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
15, 151
               

               
Conread position:
               
15-468
               

               
Cow position:
               
chr19:35762077-35762521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 58
               

               
Conread position:
               
17-195
               

               
Cow position:
               
chr19:14581536-14581360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
13, 56
               

               
Conread position:
               
18-369
               

               
Cow position:
               
chr19:21817141-21816798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
12, 159
               

               
Conread position:
               
20-240
               

               
Cow position:
               
chr19:33988242-33988019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
10, 58
               

               
Conread position:
               
20-242
               

               
Cow position:
               
chr19:33913703-33913476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
20-287
               

               
Cow position:
               
chr19:13488333-13488587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
10, 60
               

               
Conread position:
               
20-336
               

               
Cow position:
               
chr19:42517081-42517388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 206
               

               
Conread position:
               
20-419
               

               
Cow position:
               
chr19:55688521-55688922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 134
               

               
Conread position:
               
20-426
               

               
Cow position:
               
chr19:20935926-20935528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
9, 68
               

               
Conread position:
               
20-426
               

               
Cow position:
               
chr19:21378293-21378691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 207
               

               
Conread position:
               
21-426
               

               
Cow position:
               
chr19:27612008-27612394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 53
               

               
Conread position:
               
25-347
               

               
Cow position:
               
chr19:52196875-52196566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
58, 16
               

               
Conread position:
               
27-359
               

               
Cow position:
               
chr19:18129724-18129406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
62, 136
               

               
Conread position:
               
27-426
               

               
Cow position:
               
chr19:27180076-27180485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
46, 133
               

               
Conread position:
               
28-186
               

               
Cow position:
               
chr19:20543809-20543958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
28-206
               

               
Cow position:
               
chr19:19916260-19916434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
28-208
               

               
Cow position:
               
chr19:19460599-19460425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
109, 54
               

               
Conread position:
               
28-223
               

               
Cow position:
               
chr19:30227686-30227489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
28-289
               

               
Cow position:
               
chr19:25763268-25763029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
180, 11
               

               
Conread position:
               
28-324
               

               
Cow position:
               
chr19:10929609-10929322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
64, 128
               

               
Conread position:
               
28-359
               

               
Cow position:
               
chr19:25854716-25855047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
50, 93
               

               
Conread position:
               
28-388
               

               
Cow position:
               
chr19:28014645-28014298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
55, 93
               

               
Conread position:
               
28-388
               

               
Cow position:
               
chr19:32754692-32754339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
49, 111
               

               
Conread position:
               
28-388
               

               
Cow position:
               
chr19:48960556-48960211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
182, 48
               

               
Conread position:
               
28-390
               

               
Cow position:
               
chr19:1664020-1664375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 185
               

               
Conread position:
               
28-423
               

               
Cow position:
               
chr19:38842394-38842778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
50, 30
               

               
Conread position:
               
28-426
               

               
Cow position:
               
chr19:23005196-23005591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
175, 46
               

               
Conread position:
               
28-426
               

               
Cow position:
               
chr19:25053497-25053899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
51, 185
               

               
Conread position:
               
28-426
               

               
Cow position:
               
chr19:33912463-33912859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
182, 50
               

               
Conread position:
               
28-426
               

               
Cow position:
               
chr19:39057411-39057019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 203
               

               
Conread position:
               
28-426
               

               
Cow position:
               
chr19:41585135-41584749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
61, 203
               

               
Conread position:
               
29-423
               

               
Cow position:
               
chr19:11171053-11171442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
8, 110
               

               
Conread position:
               
29-423
               

               
Cow position:
               
chr19:35847066-35846672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
58, 204
               

               
Conread position:
               
32-314
               

               
Cow position:
               
chr19:48744115-48744376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
177, 49
               

               
Conread position:
               
32-359
               

               
Cow position:
               
chr19:47453590-47453282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 53
               

               
Conread position:
               
32-388
               

               
Cow position:
               
chr19:42564306-42563953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
47, 195
               

               
Conread position:
               
32-426
               

               
Cow position:
               
chr19:39246064-39245674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
51, 19
               

               
Conread position:
               
32-426
               

               
Cow position:
               
chr19:41946341-41945963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 42
               

               
Conread position:
               
33-230
               

               
Cow position:
               
chr19:28447597-28447403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
175, 52
               

               
Conread position:
               
33-392
               

               
Cow position:
               
chr19:53418800-53418441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
50, 195
               

               
Conread position:
               
33-423
               

               
Cow position:
               
chr19:56149905-56150291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 67
               

               
Conread position:
               
33-442
               

               
Cow position:
               
chr19:10545548-10545952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
174, 52
               

               
Conread position:
               
34-375
               

               
Cow position:
               
chr19:15719468-15719787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
34-426
               

               
Cow position:
               
chr19:32457801-32457416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
107, 119
               

               
Conread position:
               
35-214
               

               
Cow position:
               
chr19:44143783-44143957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
172, 36
               

               
Conread position:
               
37-170
               

               
Cow position:
               
chr19:12685983-12685852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
104, 48
               

               
Conread position:
               
38-227
               

               
Cow position:
               
chr19:40002203-40002391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
99, 52
               

               
Conread position:
               
41-321
               

               
Cow position:
               
chr19:47987007-47986740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
167, 37
               

               
Conread position:
               
41-379
               

               
Cow position:
               
chr19:31127201-31127540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
46, 81
               

               
Conread position:
               
41-424
               

               
Cow position:
               
chr19:40051237-40051610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 193
               

               
Conread position:
               
41-426
               

               
Cow position:
               
chr19:23786326-23785963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
167, 30
               

               
Conread position:
               
41-426
               

               
Cow position:
               
chr19:26087348-26086969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
46, 113
               

               
Conread position:
               
42-318
               

               
Cow position:
               
chr19:23832439-23832704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
43, 114
               

               
Conread position:
               
43-208
               

               
Cow position:
               
chr19:15362549-15362716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
71, 42
               

               
Conread position:
               
43-325
               

               
Cow position:
               
chr19:23394933-23394666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
166, 63
               

               
Conread position:
               
48-359
               

               
Cow position:
               
chr19:39384897-39385191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
161, 182
               

               
Conread position:
               
50-422
               

               
Cow position:
               
chr19:16567293-16566936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
327, 37
               

               
Conread position:
               
51-353
               

               
Cow position:
               
chr19:39254300-39254602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
29, 171
               

               
Conread position:
               
52-309
               

               
Cow position:
               
chr19:16104944-16105186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
156, 17
               

               
Conread position:
               
55-426
               

               
Cow position:
               
chr19:34619892-34620254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
155, 96
               

               
Conread position:
               
57-426
               

               
Cow position:
               
chr19:8332434-8332068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
335, 28
               

               
Conread position:
               
62-424
               

               
Cow position:
               
chr19:17796026-17795671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 135
               

               
Conread position:
               
63-426
               

               
Cow position:
               
chr19:12036377-12036730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
73, 165
               

               
Conread position:
               
64-177
               

               
Cow position:
               
chr19:24637356-24637245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
114
               

               
Alignm identity:
               
91
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
66-227
               

               
Cow position:
               
chr19:28135690-28135527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
35, 88
               

               
Conread position:
               
66-231
               

               
Cow position:
               
chr19:12705715-12705877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
142, 24
               

               
Conread position:
               
66-286
               

               
Cow position:
               
chr19:22438769-22438552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
31, 37
               

               
Conread position:
               
66-360
               

               
Cow position:
               
chr19:7404249-7404535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
23, 161
               

               
Conread position:
               
66-426
               

               
Cow position:
               
chr19:35742286-35741932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
143, 30
               

               
Conread position:
               
66-442
               

               
Cow position:
               
chr19:23222756-23222391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 90
               

               
Conread position:
               
67-387
               

               
Cow position:
               
chr19:25628012-25628314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
74, 14
               

               
Conread position:
               
68-388
               

               
Cow position:
               
chr19:22798956-22799262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
265, 20
               

               
Conread position:
               
68-442
               

               
Cow position:
               
chr19:11565032-11565393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
155, 22
               

               
Conread position:
               
70-426
               

               
Cow position:
               
chr19:53542779-53543106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
260, 17
               

               
Conread position:
               
71-235
               

               
Cow position:
               
chr19:24253178-24253342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
29, 20
               

               
Conread position:
               
71-286
               

               
Cow position:
               
chr19:39781641-39781436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
139, 0
               

               
Conread position:
               
71-355
               

               
Cow position:
               
chr19:4800864-4800593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
18, 148
               

               
Conread position:
               
71-365
               

               
Cow position:
               
chr19:33237295-33237016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
259, 136
               

               
Conread position:
               
71-426
               

               
Cow position:
               
chr19:21065887-21065550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
69, 52
               

               
Conread position:
               
72-301
               

               
Cow position:
               
chr19:25853695-25853472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
25, 121
               

               
Conread position:
               
72-364
               

               
Cow position:
               
chr19:25807189-25807461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
138, 18
               

               
Conread position:
               
72-423
               

               
Cow position:
               
chr19:21335475-21335839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
69, 113
               

               
Conread position:
               
72-426
               

               
Cow position:
               
chr19:8033865-8033514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
142, 39
               

               
Conread position:
               
72-426
               

               
Cow position:
               
chr19:25652639-25652988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
23, 81
               

               
Conread position:
               
73-450
               

               
Cow position:
               
chr19:51230705-51231070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
67, 72
               

               
Conread position:
               
74-420
               

               
Cow position:
               
chr19:34001326-34000990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
23, 156
               

               
Conread position:
               
74-426
               

               
Cow position:
               
chr19:6516386-6516034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
27, 123
               

               
Conread position:
               
74-426
               

               
Cow position:
               
chr19:35018127-35018473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
135, 95
               

               
Conread position:
               
75-426
               

               
Cow position:
               
chr19:8375185-8375527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
135, 151
               

               
Conread position:
               
75-426
               

               
Cow position:
               
chr19:14348128-14347786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
254, 39
               

               
Conread position:
               
75-426
               

               
Cow position:
               
chr19:22134035-22134371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
261, 94
               

               
Conread position:
               
77-241
               

               
Cow position:
               
chr19:9541786-9541947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
131, 20
               

               
Conread position:
               
77-426
               

               
Cow position:
               
chr19:14593172-14592824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 138
               

               
Conread position:
               
77-426
               

               
Cow position:
               
chr19:33469138-33468798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
15, 154
               

               
Conread position:
               
78-241
               

               
Cow position:
               
chr19:6154478-6154648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
104, 0
               

               
Conread position:
               
78-360
               

               
Cow position:
               
chr19:39485433-39485164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
20, 73
               

               
Conread position:
               
78-411
               

               
Cow position:
               
chr19:19919348-19919673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
131, 43
               

               
Conread position:
               
78-442
               

               
Cow position:
               
chr19:6049564-6049905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
132, 12
               

               
Conread position:
               
79-217
               

               
Cow position:
               
chr19:4117250-4117390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
61, 73
               

               
Conread position:
               
79-372
               

               
Cow position:
               
chr19:35107639-35107362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
131, 46
               

               
Conread position:
               
79-388
               

               
Cow position:
               
chr19:18786209-18786503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
129, 97
               

               
Conread position:
               
80-452
               

               
Cow position:
               
chr19:29115855-29115509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
145, 81
               

               
Conread position:
               
81-220
               

               
Cow position:
               
chr19:34459360-34459499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
81-426
               

               
Cow position:
               
chr19:16693920-16694274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 146
               

               
Conread position:
               
81-445
               

               
Cow position:
               
chr19:56094651-56094294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
37, 14
               

               
Conread position:
               
83-420
               

               
Cow position:
               
chr19:25851373-25851708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
47, 57
               

               
Conread position:
               
83-420
               

               
Cow position:
               
chr19:25864809-25865144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
47, 57
               

               
Conread position:
               
85-380
               

               
Cow position:
               
chr19:11443098-11442806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
56, 143
               

               
Conread position:
               
85-387
               

               
Cow position:
               
chr19:56063322-56063616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
120, 140
               

               
Conread position:
               
86-423
               

               
Cow position:
               
chr19:52480091-52479781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
12, 23
               

               
Conread position:
               
86-426
               

               
Cow position:
               
chr19:36125693-36125358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
84, 119
               

               
Conread position:
               
87-388
               

               
Cow position:
               
chr19:36245389-36245665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
88-422
               

               
Cow position:
               
chr19:20984669-20984992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 137
               

               
Conread position:
               
89-426
               

               
Cow position:
               
chr19:7473801-7473473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
51, 63
               

               
Conread position:
               
90-426
               

               
Cow position:
               
chr19:4503322-4502994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
120, 79
               

               
Conread position:
               
90-426
               

               
Cow position:
               
chr19:35540401-35540079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
71, 125
               

               
Conread position:
               
90-426
               

               
Cow position:
               
chr19:51185524-51185201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
295, 31
               

               
Conread position:
               
91-426
               

               
Cow position:
               
chr19:5656023-5656336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
57, 63
               

               
Conread position:
               
95-426
               

               
Cow position:
               
chr19:43441265-43440937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
113, 82
               

               
Conread position:
               
96-388
               

               
Cow position:
               
chr19:25655130-25655417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
18, 144
               

               
Conread position:
               
96-416
               

               
Cow position:
               
chr19:42904105-42903803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
96-426
               

               
Cow position:
               
chr19:20310543-20310856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
287, 79
               

               
Conread position:
               
96-426
               

               
Cow position:
               
chr19:21363341-21363669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 129
               

               
Conread position:
               
96-426
               

               
Cow position:
               
chr19:30534024-30533715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
47, 39
               

               
Conread position:
               
96-426
               

               
Cow position:
               
chr19:56383251-56382921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
45, 56
               

               
Conread position:
               
97-426
               

               
Cow position:
               
chr19:17478865-17479186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
13, 40
               

               
Conread position:
               
97-426
               

               
Cow position:
               
chr19:31595396-31595073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
113, 129
               

               
Conread position:
               
97-433
               

               
Cow position:
               
chr19:52773076-52773408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
25, 48
               

               
Conread position:
               
98-426
               

               
Cow position:
               
chr19:42663734-42664042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
109, 36
               

               
Conread position:
               
99-443
               

               
Cow position:
               
chr19:47110134-47109795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
295, 112
               

               
Conread position:
               
101-332
               

               
Cow position:
               
chr19:13757342-13757123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
40, 20
               

               
Conread position:
               
101-426
               

               
Cow position:
               
chr19:990323-990636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
40, 51
               

               
Conread position:
               
110-426
               

               
Cow position:
               
chr19:42240211-42240517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 63
               

               
Conread position:
               
113-426
               

               
Cow position:
               
chr19:2734529-2734226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
97, 111
               

               
Conread position:
               
122-426
               

               
Cow position:
               
chr19:25999688-25999406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
88, 26
               

               
Conread position:
               
126-426
               

               
Cow position:
               
chr19:7543480-7543196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
88, 100
               

               
Conread position:
               
143-357
               

               
Cow position:
               
chr19:4092561-4092358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
67, 10
               

               
Conread position:
               
150-388
               

               
Cow position:
               
chr19:37646794-37647018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
150-421
               

               
Cow position:
               
chr19:31874163-31873896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
176, 72
               

               
Conread position:
               
151-375
               

               
Cow position:
               
chr19:13729795-13730006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
41, 78
               

               
Conread position:
               
153-426
               

               
Cow position:
               
chr19:4445582-4445846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
50, 73
               

               
Conread position:
               
153-426
               

               
Cow position:
               
chr19:10232370-10232628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
57, 72
               

               
Conread position:
               
153-442
               

               
Cow position:
               
chr19:35380513-35380793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
57, 65
               

               
Conread position:
               
156-426
               

               
Cow position:
               
chr19:33823355-33823091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
54, 66
               

               
Conread position:
               
163-442
               

               
Cow position:
               
chr19:15767232-15766970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
220, 50
               

               
Conread position:
               
167-388
               

               
Cow position:
               
chr19:32451110-32450899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
101, 51
               

               
Conread position:
               
171-420
               

               
Cow position:
               
chr19:1505150-1504923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
39, 69
               

               
Conread position:
               
173-426
               

               
Cow position:
               
chr19:46918869-46918615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
36, 53
               

               
Conread position:
               
177-426
               

               
Cow position:
               
chr19:36176764-36176519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
42, 47
               

               
Conread position:
               
179-426
               

               
Cow position:
               
chr19:20693513-20693271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
25, 55
               

               
Conread position:
               
180-388
               

               
Cow position:
               
chr19:19662060-19661863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
124, 41
               

               
Conread position:
               
197-426
               

               
Cow position:
               
chr19:19673425-19673192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
199-354
               

               
Cow position:
               
chr19:30927823-30927671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
30, 37
               

               
Conread position:
               
205-423
               

               
Cow position:
               
chr19:34911887-34911661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
170, 69
               

               
Conread position:
               
218-426
               

               
Cow position:
               
chr19:51267881-51267669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
115, 44
               

               
Conread position:
               
228-387
               

               
Cow position:
               
chr19:36380220-36380063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
232-388
               

               
Cow position:
               
chr19:15936810-15936659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
232-426
               

               
Cow position:
               
chr19:37562034-37562218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
157, 20
               

               
Conread position:
               
235-442
               

               
Cow position:
               
chr19:8839572-8839359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
148, 9
               

               
Conread position:
               
238-496
               

               
Cow position:
               
chr19:47118529-47118791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
140, 14
               

               
Conread position:
               
239-409
               

               
Cow position:
               
chr19:18646524-18646702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
240-426
               

               
Cow position:
               
chr19:38596586-38596389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
242-384
               

               
Cow position:
               
chr19:36976950-36977093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
248-387
               

               
Cow position:
               
chr19:2690239-2690380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
249-421
               

               
Cow position:
               
chr19:48409467-48409294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
133, 0
               

               
Conread position:
               
250-388
               

               
Cow position:
               
chr19:10706242-10706104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
250-388
               

               
Cow position:
               
chr19:35782176-35782312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
78, 60
               

               
Conread position:
               
250-423
               

               
Cow position:
               
chr19:25572402-25572223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
250-446
               

               
Cow position:
               
chr19:2771057-2771256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
62, 80
               

               
Conread position:
               
251-387
               

               
Cow position:
               
chr19:35457617-35457482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
251-388
               

               
Cow position:
               
chr19:20331855-20331985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
251-388
               

               
Cow position:
               
chr19:30746359-30746222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
53, 135
               

               
Conread position:
               
251-414
               

               
Cow position:
               
chr19:56140952-56140793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
120, 0
               

               
Conread position:
               
251-422
               

               
Cow position:
               
chr19:44838964-44839120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
251-423
               

               
Cow position:
               
chr19:2589463-2589288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
251-426
               

               
Cow position:
               
chr19:4252017-4252198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
82, 56
               

               
Conread position:
               
251-426
               

               
Cow position:
               
chr19:9541939-9542123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
126, 0
               

               
Conread position:
               
251-426
               

               
Cow position:
               
chr19:23244566-23244746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
140, 0
               

               
Conread position:
               
251-426
               

               
Cow position:
               
chr19:25696255-25696433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
134, 35
               

               
Conread position:
               
251-432
               

               
Cow position:
               
chr19:31378646-31378840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
80, 188
               

               
Conread position:
               
252-384
               

               
Cow position:
               
chr19:42069993-42070122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
78, 27
               

               
Conread position:
               
252-387
               

               
Cow position:
               
chr19:4329096-4329225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
78, 55
               

               
Conread position:
               
252-387
               

               
Cow position:
               
chr19:15442719-15442584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
8, 92
               

               
Conread position:
               
252-420
               

               
Cow position:
               
chr19:25851875-25852052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
252-420
               

               
Cow position:
               
chr19:43418361-43418198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
78, 35
               

               
Conread position:
               
252-421
               

               
Cow position:
               
chr19:14992969-14993144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
252-422
               

               
Cow position:
               
chr19:10786415-10786581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
53, 110
               

               
Conread position:
               
252-423
               

               
Cow position:
               
chr19:35808185-35808343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
252-423
               

               
Cow position:
               
chr19:37423315-37423499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
252-426
               

               
Cow position:
               
chr19:1153166-1152996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
131, 52
               

               
Conread position:
               
252-426
               

               
Cow position:
               
chr19:2138151-2138331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
252-426
               

               
Cow position:
               
chr19:8211882-8212063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
252-426
               

               
Cow position:
               
chr19:10093247-10093070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
252-426
               

               
Cow position:
               
chr19:13390865-13390694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
82, 49
               

               
Conread position:
               
252-426
               

               
Cow position:
               
chr19:17273776-17273946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
84, 111
               

               
Conread position:
               
252-426
               

               
Cow position:
               
chr19:29627426-29627600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
53, 49
               

               
Conread position:
               
252-426
               

               
Cow position:
               
chr19:34425538-34425362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
81, 154
               

               
Conread position:
               
252-426
               

               
Cow position:
               
chr19:42205886-42205708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
140, 93
               

               
Conread position:
               
252-426
               

               
Cow position:
               
chr19:44757666-44757832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
133, 38
               

               
Conread position:
               
252-426
               

               
Cow position:
               
chr19:46180863-46181040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
131, 18
               

               
Conread position:
               
252-426
               

               
Cow position:
               
chr19:47187102-47187278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
84, 29
               

               
Conread position:
               
252-426
               

               
Cow position:
               
chr19:53953707-53953870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
79, 35
               

               
Conread position:
               
252-426
               

               
Cow position:
               
chr19:55724747-55724925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
80, 94
               

               
Conread position:
               
252-437
               

               
Cow position:
               
chr19:47727623-47727807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
132, 51
               

               
Conread position:
               
252-500
               

               
Cow position:
               
chr19:1898282-1898533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
76, 183
               

               
Conread position:
               
253-359
               

               
Cow position:
               
chr19:14928703-14928810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
108
               

               
Alignm identity:
               
88
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
253-388
               

               
Cow position:
               
chr19:25637544-25637679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
45, 74
               

               
Conread position:
               
253-426
               

               
Cow position:
               
chr19:33932196-33932367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
136, 105
               

               
Conread position:
               
253-426
               

               
Cow position:
               
chr19:39794916-39794731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
254-345
               

               
Cow position:
               
chr19:44572056-44571965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
92
               

               
Alignm identity:
               
81
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
254-390
               

               
Cow position:
               
chr19:4722085-4722221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
77, 61
               

               
Conread position:
               
254-426
               

               
Cow position:
               
chr19:15863091-15863264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
133, 32
               

               
Conread position:
               
254-426
               

               
Cow position:
               
chr19:24062235-24062071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
254-442
               

               
Cow position:
               
chr19:42726310-42726111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
126, 16
               

               
Conread position:
               
255-423
               

               
Cow position:
               
chr19:10171953-10171778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
255-426
               

               
Cow position:
               
chr19:20670945-20671127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
258-423
               

               
Cow position:
               
chr19:25025547-25025715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
131, 108
               

               
Conread position:
               
258-426
               

               
Cow position:
               
chr19:30925374-30925544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
76, 106
               

               
Conread position:
               
258-426
               

               
Cow position:
               
chr19:34955746-34955923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
121, 0
               

               
Conread position:
               
259-388
               

               
Cow position:
               
chr19:6092716-6092586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
259-388
               

               
Cow position:
               
chr19:8270654-8270786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
259-423
               

               
Cow position:
               
chr19:11758657-11758824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
130, 0
               

               
Conread position:
               
259-426
               

               
Cow position:
               
chr19:4537470-4537639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
259-426
               

               
Cow position:
               
chr19:54294642-54294809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
74, 47
               

               
Conread position:
               
261-423
               

               
Cow position:
               
chr19:53037208-53037377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
264-432
               

               
Cow position:
               
chr19:53086221-53086056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
269-448
               

               
Cow position:
               
chr19:52136756-52136943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
107, 163
               

               
Conread position:
               
271-423
               

               
Cow position:
               
chr19:7612555-7612402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
112, 0
               

               
Conread position:
               
272-443
               

               
Cow position:
               
chr19:3178034-3177862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
274-426
               

               
Cow position:
               
chr19:38637874-38638027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
88, 105
               

               
Conread position:
               
276-426
               

               
Cow position:
               
chr19:48475073-48474918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
102, 47
               

               
Conread position:
               
280-426
               

               
Cow position:
               
chr19:4587795-4587946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
107, 0
               

               
Conread position:
               
288-426
               

               
Cow position:
               
chr19:55210549-55210686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
99, 87
               

               
Conread position:
               
289-426
               

               
Cow position:
               
chr19:7492351-7492214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
292-422
               

               
Cow position:
               
chr19:46159971-46159835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
292-426
               

               
Cow position:
               
chr19:33882247-33882386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
297-442
               

               
Cow position:
               
chr19:25086441-25086296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
86, 132
               

               
Conread position:
               
299-423
               

               
Cow position:
               
chr19:39697977-39697848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
98, 0
               
Show alignments to all cow chromosomes.