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Cow genome map

           
Conread name:
           
LyN1-MLN01E020019
        

               
Conread position:
               
1-138
               

               
Cow position:
               
chr3:75908090-75907953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
29, 79
               

               
Conread position:
               
1-163
               

               
Cow position:
               
chr3:22868538-22868704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
29, 9
               

               
Conread position:
               
1-166
               

               
Cow position:
               
chr3:82424902-82425066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
29, 15
               

               
Conread position:
               
1-167
               

               
Cow position:
               
chr3:57641982-57641812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
29, 102
               

               
Conread position:
               
1-174
               

               
Cow position:
               
chr3:24774821-24774658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
138, 33
               

               
Conread position:
               
1-174
               

               
Cow position:
               
chr3:74050527-74050697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
29, 72
               

               
Conread position:
               
1-186
               

               
Cow position:
               
chr3:55730286-55730476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
1-187
               

               
Cow position:
               
chr3:23804680-23804496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
176, 8
               

               
Conread position:
               
1-187
               

               
Cow position:
               
chr3:56943751-56943934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
29, 78
               

               
Conread position:
               
1-189
               

               
Cow position:
               
chr3:23818666-23818481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
29, 68
               

               
Conread position:
               
1-192
               

               
Cow position:
               
chr3:18699928-18700124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
9, 121
               

               
Conread position:
               
1-192
               

               
Cow position:
               
chr3:76168450-76168645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
1-195
               

               
Cow position:
               
chr3:23203051-23203247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
29, 15
               

               
Conread position:
               
1-200
               

               
Cow position:
               
chr3:59681728-59681925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
29, 86
               

               
Conread position:
               
1-200
               

               
Cow position:
               
chr3:73701677-73701483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
154, 20
               

               
Conread position:
               
1-200
               

               
Cow position:
               
chr3:76415704-76415924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
29, 127
               

               
Conread position:
               
1-201
               

               
Cow position:
               
chr3:31115099-31115292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
24, 86
               

               
Conread position:
               
1-201
               

               
Cow position:
               
chr3:47198946-47199149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
9, 60
               

               
Conread position:
               
1-202
               

               
Cow position:
               
chr3:36418308-36418503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
29, 72
               

               
Conread position:
               
1-206
               

               
Cow position:
               
chr3:8522975-8523177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
28, 122
               

               
Conread position:
               
1-207
               

               
Cow position:
               
chr3:67407188-67407394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
33, 86
               

               
Conread position:
               
1-208
               

               
Cow position:
               
chr3:5703355-5703149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
29, 137
               

               
Conread position:
               
1-208
               

               
Cow position:
               
chr3:22924201-22924404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
29, 72
               

               
Conread position:
               
1-208
               

               
Cow position:
               
chr3:44960125-44959913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
1-208
               

               
Cow position:
               
chr3:76270067-76269863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
29, 86
               

               
Conread position:
               
1-214
               

               
Cow position:
               
chr3:15159208-15158995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
88, 19
               

               
Conread position:
               
1-215
               

               
Cow position:
               
chr3:8813925-8814149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
69, 24
               

               
Conread position:
               
1-215
               

               
Cow position:
               
chr3:48810458-48810682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
1-220
               

               
Cow position:
               
chr3:68004531-68004744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
206, 8
               

               
Conread position:
               
1-222
               

               
Cow position:
               
chr3:30940984-30940757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
80, 31
               

               
Conread position:
               
1-226
               

               
Cow position:
               
chr3:3556728-3556497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
9, 121
               

               
Conread position:
               
1-227
               

               
Cow position:
               
chr3:68156906-68156672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
38, 153
               

               
Conread position:
               
1-231
               

               
Cow position:
               
chr3:6182054-6182275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
29, 14
               

               
Conread position:
               
1-236
               

               
Cow position:
               
chr3:3316629-3316874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
29, 164
               

               
Conread position:
               
1-236
               

               
Cow position:
               
chr3:64197005-64196768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
9, 87
               

               
Conread position:
               
1-238
               

               
Cow position:
               
chr3:8349392-8349625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
180, 29
               

               
Conread position:
               
1-242
               

               
Cow position:
               
chr3:31349930-31350167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
29, 17
               

               
Conread position:
               
1-242
               

               
Cow position:
               
chr3:69785440-69785691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
1-286
               

               
Cow position:
               
chr3:47753416-47753130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
29, 236
               

               
Conread position:
               
1-299
               

               
Cow position:
               
chr3:3656696-3656407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
11, 35
               

               
Conread position:
               
1-301
               

               
Cow position:
               
chr3:57704511-57704214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
29, 88
               

               
Conread position:
               
1-339
               

               
Cow position:
               
chr3:3883641-3883965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 84
               

               
Conread position:
               
1-345
               

               
Cow position:
               
chr3:55177572-55177905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 72
               

               
Conread position:
               
1-350
               

               
Cow position:
               
chr3:34871747-34871411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
28, 136
               

               
Conread position:
               
1-351
               

               
Cow position:
               
chr3:15153869-15153534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
11, 81
               

               
Conread position:
               
1-352
               

               
Cow position:
               
chr3:9662989-9663331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
5, 203
               

               
Conread position:
               
1-352
               

               
Cow position:
               
chr3:79093884-79094207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
147, 9
               

               
Conread position:
               
1-358
               

               
Cow position:
               
chr3:48072707-48073039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
146, 29
               

               
Conread position:
               
1-360
               

               
Cow position:
               
chr3:55819928-55819580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
29, 91
               

               
Conread position:
               
1-370
               

               
Cow position:
               
chr3:62046850-62046485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
29, 225
               

               
Conread position:
               
1-386
               

               
Cow position:
               
chr3:7337606-7337963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 31
               

               
Conread position:
               
1-388
               

               
Cow position:
               
chr3:12705369-12705741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 8
               

               
Conread position:
               
1-388
               

               
Cow position:
               
chr3:68707843-68708199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 69
               

               
Conread position:
               
1-388
               

               
Cow position:
               
chr3:68880952-68881307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 83
               

               
Conread position:
               
1-400
               

               
Cow position:
               
chr3:55318718-55319110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
9, 117
               

               
Conread position:
               
1-423
               

               
Cow position:
               
chr3:27274706-27274298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 86
               

               
Conread position:
               
1-426
               

               
Cow position:
               
chr3:2396616-2397021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
29, 100
               

               
Conread position:
               
1-426
               

               
Cow position:
               
chr3:4461311-4461727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 77
               

               
Conread position:
               
1-426
               

               
Cow position:
               
chr3:15953902-15954315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
9, 230
               

               
Conread position:
               
1-426
               

               
Cow position:
               
chr3:22232489-22232881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 65
               

               
Conread position:
               
1-426
               

               
Cow position:
               
chr3:26066166-26065763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
29, 73
               

               
Conread position:
               
1-426
               

               
Cow position:
               
chr3:29596575-29596156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
9, 39
               

               
Conread position:
               
1-426
               

               
Cow position:
               
chr3:55970695-55970266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
9, 131
               

               
Conread position:
               
1-426
               

               
Cow position:
               
chr3:59605021-59604632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 95
               

               
Conread position:
               
1-426
               

               
Cow position:
               
chr3:71231577-71231168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 164
               

               
Conread position:
               
1-426
               

               
Cow position:
               
chr3:74234359-74233957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
389, 8
               

               
Conread position:
               
1-426
               

               
Cow position:
               
chr3:75080931-75080528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 54
               

               
Conread position:
               
1-426
               

               
Cow position:
               
chr3:83454978-83455390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
385, 32
               

               
Conread position:
               
1-426
               

               
Cow position:
               
chr3:83474933-83474509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 200
               

               
Conread position:
               
1-442
               

               
Cow position:
               
chr3:49482534-49482962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
8, 120
               

               
Conread position:
               
1-442
               

               
Cow position:
               
chr3:66884851-66885294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 79
               

               
Conread position:
               
1-442
               

               
Cow position:
               
chr3:67929079-67929522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
9, 121
               

               
Conread position:
               
1-442
               

               
Cow position:
               
chr3:77188618-77188186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
25, 8
               

               
Conread position:
               
2-195
               

               
Cow position:
               
chr3:61023843-61024039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
28, 11
               

               
Conread position:
               
2-227
               

               
Cow position:
               
chr3:8540679-8540475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
205, 77
               

               
Conread position:
               
2-227
               

               
Cow position:
               
chr3:44960840-44961053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
28, 58
               

               
Conread position:
               
2-241
               

               
Cow position:
               
chr3:49363283-49363047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
28, 7
               

               
Conread position:
               
2-412
               

               
Cow position:
               
chr3:74754493-74754105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
28, 74
               

               
Conread position:
               
2-442
               

               
Cow position:
               
chr3:23408186-23408599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 70
               

               
Conread position:
               
3-171
               

               
Cow position:
               
chr3:26393122-26393292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
3-174
               

               
Cow position:
               
chr3:17531560-17531733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
26, 13
               

               
Conread position:
               
3-186
               

               
Cow position:
               
chr3:19044591-19044773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
27, 135
               

               
Conread position:
               
3-186
               

               
Cow position:
               
chr3:32436815-32436631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
27, 104
               

               
Conread position:
               
3-187
               

               
Cow position:
               
chr3:29234501-29234690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
27, 118
               

               
Conread position:
               
3-195
               

               
Cow position:
               
chr3:76056111-76056301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
26, 66
               

               
Conread position:
               
3-207
               

               
Cow position:
               
chr3:15160693-15160492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
27, 6
               

               
Conread position:
               
3-207
               

               
Cow position:
               
chr3:73335456-73335256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
105, 27
               

               
Conread position:
               
3-231
               

               
Cow position:
               
chr3:9121019-9120792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
84, 31
               

               
Conread position:
               
3-281
               

               
Cow position:
               
chr3:71474230-71474497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
27, 75
               

               
Conread position:
               
3-298
               

               
Cow position:
               
chr3:22165237-22165523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 167
               

               
Conread position:
               
3-312
               

               
Cow position:
               
chr3:15950739-15951031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
7, 65
               

               
Conread position:
               
3-388
               

               
Cow position:
               
chr3:78092333-78092701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 123
               

               
Conread position:
               
3-442
               

               
Cow position:
               
chr3:64010636-64011073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
80, 15
               

               
Conread position:
               
4-164
               

               
Cow position:
               
chr3:2637121-2636964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
26, 42
               

               
Conread position:
               
4-174
               

               
Cow position:
               
chr3:26977713-26977539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
26, 73
               

               
Conread position:
               
4-174
               

               
Cow position:
               
chr3:83672031-83671860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
26, 114
               

               
Conread position:
               
4-188
               

               
Cow position:
               
chr3:19709281-19709101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
26, 69
               

               
Conread position:
               
4-190
               

               
Cow position:
               
chr3:41510754-41510565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
26, 151
               

               
Conread position:
               
4-232
               

               
Cow position:
               
chr3:19682882-19682641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
4-246
               

               
Cow position:
               
chr3:56948920-56949156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
206, 30
               

               
Conread position:
               
4-286
               

               
Cow position:
               
chr3:4549193-4548921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
136, 30
               

               
Conread position:
               
4-372
               

               
Cow position:
               
chr3:70761947-70762302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 83
               

               
Conread position:
               
4-388
               

               
Cow position:
               
chr3:48363245-48362890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 69
               

               
Conread position:
               
4-426
               

               
Cow position:
               
chr3:37041592-37041189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
85, 28
               

               
Conread position:
               
4-426
               

               
Cow position:
               
chr3:59209002-59208576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
137, 30
               

               
Conread position:
               
4-426
               

               
Cow position:
               
chr3:59610543-59610962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 69
               

               
Conread position:
               
4-426
               

               
Cow position:
               
chr3:61224573-61224973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 69
               

               
Conread position:
               
5-139
               

               
Cow position:
               
chr3:39967321-39967449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
5-145
               

               
Cow position:
               
chr3:24370566-24370435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
5-158
               

               
Cow position:
               
chr3:22078253-22078096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
5-170
               

               
Cow position:
               
chr3:3453757-3453588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
5-170
               

               
Cow position:
               
chr3:77098649-77098814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
25, 82
               

               
Conread position:
               
5-171
               

               
Cow position:
               
chr3:19611178-19611344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
25, 84
               

               
Conread position:
               
5-171
               

               
Cow position:
               
chr3:37641501-37641334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
25, 95
               

               
Conread position:
               
5-171
               

               
Cow position:
               
chr3:43895888-43896052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
26, 68
               

               
Conread position:
               
5-171
               

               
Cow position:
               
chr3:68094327-68094152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
63, 29
               

               
Conread position:
               
5-177
               

               
Cow position:
               
chr3:21959840-21959661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
25, 55
               

               
Conread position:
               
5-185
               

               
Cow position:
               
chr3:81616275-81616459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
5-187
               

               
Cow position:
               
chr3:35075047-35074870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
25, 68
               

               
Conread position:
               
5-192
               

               
Cow position:
               
chr3:23640514-23640330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
25, 65
               

               
Conread position:
               
5-201
               

               
Cow position:
               
chr3:73589591-73589793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
5-201
               

               
Cow position:
               
chr3:75966607-75966803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
25, 75
               

               
Conread position:
               
5-205
               

               
Cow position:
               
chr3:33002560-33002361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
25, 68
               

               
Conread position:
               
5-208
               

               
Cow position:
               
chr3:52845730-52845522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
25, 73
               

               
Conread position:
               
5-208
               

               
Cow position:
               
chr3:82366304-82366100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
24, 136
               

               
Conread position:
               
5-209
               

               
Cow position:
               
chr3:78071617-78071822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
25, 91
               

               
Conread position:
               
5-215
               

               
Cow position:
               
chr3:11229196-11229402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
204, 25
               

               
Conread position:
               
5-215
               

               
Cow position:
               
chr3:45882074-45881861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
25, 149
               

               
Conread position:
               
5-216
               

               
Cow position:
               
chr3:18426525-18426745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
25, 74
               

               
Conread position:
               
5-216
               

               
Cow position:
               
chr3:31804595-31804803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
25, 68
               

               
Conread position:
               
5-216
               

               
Cow position:
               
chr3:75173425-75173618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
202, 29
               

               
Conread position:
               
5-226
               

               
Cow position:
               
chr3:3947211-3946990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
47, 29
               

               
Conread position:
               
5-226
               

               
Cow position:
               
chr3:5305978-5305751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
74, 19
               

               
Conread position:
               
5-226
               

               
Cow position:
               
chr3:23131993-23132217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
5-227
               

               
Cow position:
               
chr3:75107947-75107725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
25, 68
               

               
Conread position:
               
5-231
               

               
Cow position:
               
chr3:49344867-49344640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
93, 25
               

               
Conread position:
               
5-232
               

               
Cow position:
               
chr3:11281943-11281712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
25, 5
               

               
Conread position:
               
5-305
               

               
Cow position:
               
chr3:58317768-58318066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
25, 216
               

               
Conread position:
               
5-332
               

               
Cow position:
               
chr3:76156161-76155846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 85
               

               
Conread position:
               
5-333
               

               
Cow position:
               
chr3:15443551-15443870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
25, 185
               

               
Conread position:
               
5-334
               

               
Cow position:
               
chr3:17331894-17331585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
25, 55
               

               
Conread position:
               
5-334
               

               
Cow position:
               
chr3:48900155-48900479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
25, 151
               

               
Conread position:
               
5-334
               

               
Cow position:
               
chr3:73237358-73237053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
25, 61
               

               
Conread position:
               
5-342
               

               
Cow position:
               
chr3:22221501-22221170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
25, 82
               

               
Conread position:
               
5-347
               

               
Cow position:
               
chr3:2648333-2648668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
25, 95
               

               
Conread position:
               
5-350
               

               
Cow position:
               
chr3:19586039-19585704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 162
               

               
Conread position:
               
5-357
               

               
Cow position:
               
chr3:60264547-60264879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 64
               

               
Conread position:
               
5-358
               

               
Cow position:
               
chr3:76267799-76268146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
25, 231
               

               
Conread position:
               
5-369
               

               
Cow position:
               
chr3:19793072-19792716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
107, 25
               

               
Conread position:
               
5-387
               

               
Cow position:
               
chr3:23105190-23105560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 81
               

               
Conread position:
               
5-388
               

               
Cow position:
               
chr3:70609800-70609431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 48
               

               
Conread position:
               
5-403
               

               
Cow position:
               
chr3:76713137-76713537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
25, 183
               

               
Conread position:
               
5-407
               

               
Cow position:
               
chr3:48253054-48252671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
26, 68
               

               
Conread position:
               
5-409
               

               
Cow position:
               
chr3:54781818-54782232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 118
               

               
Conread position:
               
5-416
               

               
Cow position:
               
chr3:75050448-75050846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
328, 66
               

               
Conread position:
               
5-422
               

               
Cow position:
               
chr3:13353539-13353123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
24, 76
               

               
Conread position:
               
5-425
               

               
Cow position:
               
chr3:189049-188622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
23, 16
               

               
Conread position:
               
5-426
               

               
Cow position:
               
chr3:2506301-2506719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 142
               

               
Conread position:
               
5-426
               

               
Cow position:
               
chr3:3985490-3985092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
25, 10
               

               
Conread position:
               
5-426
               

               
Cow position:
               
chr3:9641730-9641326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 68
               

               
Conread position:
               
5-426
               

               
Cow position:
               
chr3:14553047-14552640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
25, 67
               

               
Conread position:
               
5-426
               

               
Cow position:
               
chr3:16752079-16752491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 167
               

               
Conread position:
               
5-426
               

               
Cow position:
               
chr3:17936672-17937077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 87
               

               
Conread position:
               
5-426
               

               
Cow position:
               
chr3:18067305-18066896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
65, 29
               

               
Conread position:
               
5-426
               

               
Cow position:
               
chr3:31309179-31309593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 29
               

               
Conread position:
               
5-426
               

               
Cow position:
               
chr3:39969688-39970110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 82
               

               
Conread position:
               
5-426
               

               
Cow position:
               
chr3:43233678-43233265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
25, 68
               

               
Conread position:
               
5-426
               

               
Cow position:
               
chr3:44932687-44932270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 84
               

               
Conread position:
               
5-426
               

               
Cow position:
               
chr3:50768854-50768440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 87
               

               
Conread position:
               
5-426
               

               
Cow position:
               
chr3:52651905-52652312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
25, 87
               

               
Conread position:
               
5-426
               

               
Cow position:
               
chr3:54946296-54945886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
371, 29
               

               
Conread position:
               
5-426
               

               
Cow position:
               
chr3:55189575-55189989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 229
               

               
Conread position:
               
5-426
               

               
Cow position:
               
chr3:59474295-59473874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
25, 71
               

               
Conread position:
               
5-426
               

               
Cow position:
               
chr3:65058874-65058463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 93
               

               
Conread position:
               
5-426
               

               
Cow position:
               
chr3:67744466-67744866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
25, 64
               

               
Conread position:
               
5-426
               

               
Cow position:
               
chr3:71247188-71246798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
142, 25
               

               
Conread position:
               
5-426
               

               
Cow position:
               
chr3:73395290-73394878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
26, 53
               

               
Conread position:
               
5-426
               

               
Cow position:
               
chr3:73467801-73467381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
107, 29
               

               
Conread position:
               
5-426
               

               
Cow position:
               
chr3:75480173-75479774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 71
               

               
Conread position:
               
5-426
               

               
Cow position:
               
chr3:75570271-75570680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
25, 55
               

               
Conread position:
               
5-426
               

               
Cow position:
               
chr3:77365117-77365532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 25
               

               
Conread position:
               
5-426
               

               
Cow position:
               
chr3:78077365-78076951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
25, 87
               

               
Conread position:
               
5-426
               

               
Cow position:
               
chr3:80740728-80740334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
203, 29
               

               
Conread position:
               
5-442
               

               
Cow position:
               
chr3:2392794-2393222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
25, 82
               

               
Conread position:
               
5-445
               

               
Cow position:
               
chr3:18687076-18686657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 71
               

               
Conread position:
               
5-445
               

               
Cow position:
               
chr3:53222187-53221758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 71
               

               
Conread position:
               
5-480
               

               
Cow position:
               
chr3:53790367-53790833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 45
               

               
Conread position:
               
6-216
               

               
Cow position:
               
chr3:15973744-15973528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
6-279
               

               
Cow position:
               
chr3:22716103-22716388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
24, 241
               

               
Conread position:
               
6-426
               

               
Cow position:
               
chr3:16333979-16333568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
9, 213
               

               
Conread position:
               
7-215
               

               
Cow position:
               
chr3:81234561-81234352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
23, 66
               

               
Conread position:
               
7-426
               

               
Cow position:
               
chr3:75158528-75158127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 27
               

               
Conread position:
               
8-168
               

               
Cow position:
               
chr3:68624391-68624228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
8-195
               

               
Cow position:
               
chr3:70756467-70756658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
22, 113
               

               
Conread position:
               
8-336
               

               
Cow position:
               
chr3:74939753-74939414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
22, 68
               

               
Conread position:
               
9-168
               

               
Cow position:
               
chr3:40957957-40958116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
21, 70
               

               
Conread position:
               
9-171
               

               
Cow position:
               
chr3:4518013-4518175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
21, 78
               

               
Conread position:
               
9-205
               

               
Cow position:
               
chr3:45314523-45314318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
9-206
               

               
Cow position:
               
chr3:46559545-46559742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
21, 67
               

               
Conread position:
               
9-208
               

               
Cow position:
               
chr3:14547170-14546973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
21, 78
               

               
Conread position:
               
9-215
               

               
Cow position:
               
chr3:41863793-41863587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
21, 64
               

               
Conread position:
               
9-224
               

               
Cow position:
               
chr3:59933551-59933325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
21, 117
               

               
Conread position:
               
9-227
               

               
Cow position:
               
chr3:26970982-26970765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
9-236
               

               
Cow position:
               
chr3:53428747-53428973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
21, 71
               

               
Conread position:
               
9-236
               

               
Cow position:
               
chr3:78093222-78093448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
21, 32
               

               
Conread position:
               
9-290
               

               
Cow position:
               
chr3:75608659-75608399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
21, 64
               

               
Conread position:
               
9-299
               

               
Cow position:
               
chr3:31361594-31361312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
21, 61
               

               
Conread position:
               
9-300
               

               
Cow position:
               
chr3:1037199-1036918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
21, 222
               

               
Conread position:
               
9-331
               

               
Cow position:
               
chr3:17058376-17058678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
21, 78
               

               
Conread position:
               
9-377
               

               
Cow position:
               
chr3:54506877-54506525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 80
               

               
Conread position:
               
9-388
               

               
Cow position:
               
chr3:23168897-23169261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
204, 25
               

               
Conread position:
               
9-388
               

               
Cow position:
               
chr3:61169981-61169605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
21, 134
               

               
Conread position:
               
9-400
               

               
Cow position:
               
chr3:68587190-68586814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 79
               

               
Conread position:
               
9-410
               

               
Cow position:
               
chr3:83215440-83215031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
21, 154
               

               
Conread position:
               
9-423
               

               
Cow position:
               
chr3:15051781-15052180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 95
               

               
Conread position:
               
9-423
               

               
Cow position:
               
chr3:53384109-53384518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
21, 60
               

               
Conread position:
               
9-426
               

               
Cow position:
               
chr3:2025374-2024946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
21, 114
               

               
Conread position:
               
9-426
               

               
Cow position:
               
chr3:8061291-8060894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
204, 32
               

               
Conread position:
               
9-426
               

               
Cow position:
               
chr3:10958073-10958467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
198, 25
               

               
Conread position:
               
9-426
               

               
Cow position:
               
chr3:23471292-23471706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
21, 64
               

               
Conread position:
               
9-426
               

               
Cow position:
               
chr3:26904270-26903877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
21, 61
               

               
Conread position:
               
9-426
               

               
Cow position:
               
chr3:51578153-51578559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
21, 130
               

               
Conread position:
               
9-426
               

               
Cow position:
               
chr3:53150504-53150089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 69
               

               
Conread position:
               
9-426
               

               
Cow position:
               
chr3:54435139-54434735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
21, 81
               

               
Conread position:
               
9-426
               

               
Cow position:
               
chr3:60597708-60597310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
18, 64
               

               
Conread position:
               
9-426
               

               
Cow position:
               
chr3:65237194-65236787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
21, 78
               

               
Conread position:
               
9-426
               

               
Cow position:
               
chr3:70896210-70895808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
21, 45
               

               
Conread position:
               
9-426
               

               
Cow position:
               
chr3:74533505-74533110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 64
               

               
Conread position:
               
9-442
               

               
Cow position:
               
chr3:54739729-54740128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
32, 23
               

               
Conread position:
               
9-442
               

               
Cow position:
               
chr3:71496958-71497401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
21, 219
               

               
Conread position:
               
9-443
               

               
Cow position:
               
chr3:3032580-3032138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
17, 181
               

               
Conread position:
               
10-192
               

               
Cow position:
               
chr3:63860440-63860624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
10-240
               

               
Cow position:
               
chr3:10591343-10591578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
20, 57
               

               
Conread position:
               
10-245
               

               
Cow position:
               
chr3:10668709-10668946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
19, 72
               

               
Conread position:
               
10-378
               

               
Cow position:
               
chr3:7662027-7661667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
20, 171
               

               
Conread position:
               
10-387
               

               
Cow position:
               
chr3:64280768-64281126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 70
               

               
Conread position:
               
10-388
               

               
Cow position:
               
chr3:36375368-36375739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 110
               

               
Conread position:
               
10-388
               

               
Cow position:
               
chr3:80072313-80071929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 159
               

               
Conread position:
               
10-423
               

               
Cow position:
               
chr3:82019672-82020079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
26, 62
               

               
Conread position:
               
10-426
               

               
Cow position:
               
chr3:210492-210085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 219
               

               
Conread position:
               
10-426
               

               
Cow position:
               
chr3:22675937-22676320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
20, 101
               

               
Conread position:
               
10-426
               

               
Cow position:
               
chr3:30180253-30179845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 63
               

               
Conread position:
               
10-426
               

               
Cow position:
               
chr3:55124115-55124516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
58, 20
               

               
Conread position:
               
10-445
               

               
Cow position:
               
chr3:54903737-54903309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
20, 113
               

               
Conread position:
               
11-208
               

               
Cow position:
               
chr3:20021437-20021240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
19, 76
               

               
Conread position:
               
11-208
               

               
Cow position:
               
chr3:75238630-75238428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
11-300
               

               
Cow position:
               
chr3:9117203-9116920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
19, 178
               

               
Conread position:
               
11-372
               

               
Cow position:
               
chr3:76922504-76922842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 50
               

               
Conread position:
               
11-379
               

               
Cow position:
               
chr3:59597342-59596999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
19, 62
               

               
Conread position:
               
11-388
               

               
Cow position:
               
chr3:13301680-13302043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
19, 54
               

               
Conread position:
               
11-426
               

               
Cow position:
               
chr3:56476843-56476444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 42
               

               
Conread position:
               
11-443
               

               
Cow position:
               
chr3:58540348-58540790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
19, 142
               

               
Conread position:
               
13-227
               

               
Cow position:
               
chr3:59299740-59299525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
17, 67
               

               
Conread position:
               
13-414
               

               
Cow position:
               
chr3:38864285-38863891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 61
               

               
Conread position:
               
13-420
               

               
Cow position:
               
chr3:65969341-65968922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 220
               

               
Conread position:
               
13-426
               

               
Cow position:
               
chr3:17221966-17222382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 210
               

               
Conread position:
               
14-387
               

               
Cow position:
               
chr3:57274224-57273872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 33
               

               
Conread position:
               
16-171
               

               
Cow position:
               
chr3:5737910-5737759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
13, 64
               

               
Conread position:
               
17-426
               

               
Cow position:
               
chr3:7566258-7566657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
13, 56
               

               
Conread position:
               
18-334
               

               
Cow position:
               
chr3:73820203-73820511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
50, 16
               

               
Conread position:
               
20-226
               

               
Cow position:
               
chr3:53083823-53084036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
20-319
               

               
Cow position:
               
chr3:13380118-13380413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
10, 53
               

               
Conread position:
               
20-342
               

               
Cow position:
               
chr3:79196923-79196610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 199
               

               
Conread position:
               
20-388
               

               
Cow position:
               
chr3:74079478-74079834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 78
               

               
Conread position:
               
20-416
               

               
Cow position:
               
chr3:66900567-66900970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 109
               

               
Conread position:
               
20-426
               

               
Cow position:
               
chr3:48241767-48241383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
348, 15
               

               
Conread position:
               
20-426
               

               
Cow position:
               
chr3:53046498-53046895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 163
               

               
Conread position:
               
21-388
               

               
Cow position:
               
chr3:74119271-74119637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
53, 80
               

               
Conread position:
               
25-238
               

               
Cow position:
               
chr3:60265100-60265310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
183, 139
               

               
Conread position:
               
25-426
               

               
Cow position:
               
chr3:52608334-52607945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
183, 51
               

               
Conread position:
               
26-334
               

               
Cow position:
               
chr3:21014801-21015101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
57, 96
               

               
Conread position:
               
26-445
               

               
Cow position:
               
chr3:18498170-18497764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
73, 57
               

               
Conread position:
               
27-388
               

               
Cow position:
               
chr3:25945246-25944886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
51, 28
               

               
Conread position:
               
27-426
               

               
Cow position:
               
chr3:74601263-74600879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 45
               

               
Conread position:
               
27-426
               

               
Cow position:
               
chr3:80565116-80564722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 59
               

               
Conread position:
               
28-139
               

               
Cow position:
               
chr3:77665404-77665512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
112
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
28-214
               

               
Cow position:
               
chr3:35624393-35624581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
50, 90
               

               
Conread position:
               
28-216
               

               
Cow position:
               
chr3:82123403-82123586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
179, 14
               

               
Conread position:
               
28-226
               

               
Cow position:
               
chr3:26603396-26603602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
12, 204
               

               
Conread position:
               
28-242
               

               
Cow position:
               
chr3:84174454-84174238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
40, 199
               

               
Conread position:
               
28-352
               

               
Cow position:
               
chr3:59035193-59034874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
42, 126
               

               
Conread position:
               
28-359
               

               
Cow position:
               
chr3:68616185-68616491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
179, 43
               

               
Conread position:
               
28-383
               

               
Cow position:
               
chr3:55434481-55434141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
48, 92
               

               
Conread position:
               
28-387
               

               
Cow position:
               
chr3:67698429-67698085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
59, 169
               

               
Conread position:
               
28-388
               

               
Cow position:
               
chr3:57754325-57754675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
80, 91
               

               
Conread position:
               
28-408
               

               
Cow position:
               
chr3:45211454-45211075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
55, 127
               

               
Conread position:
               
28-414
               

               
Cow position:
               
chr3:65413124-65413502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 201
               

               
Conread position:
               
28-426
               

               
Cow position:
               
chr3:1830423-1830801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
55, 94
               

               
Conread position:
               
28-426
               

               
Cow position:
               
chr3:2675182-2674791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 200
               

               
Conread position:
               
28-426
               

               
Cow position:
               
chr3:30008756-30009148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
50, 30
               

               
Conread position:
               
28-426
               

               
Cow position:
               
chr3:39661304-39661688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
48, 147
               

               
Conread position:
               
28-426
               

               
Cow position:
               
chr3:53592536-53592939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
59, 93
               

               
Conread position:
               
28-426
               

               
Cow position:
               
chr3:55947749-55947337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
50, 92
               

               
Conread position:
               
28-426
               

               
Cow position:
               
chr3:59000613-59000984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
81, 43
               

               
Conread position:
               
28-442
               

               
Cow position:
               
chr3:71238300-71237901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
355, 43
               

               
Conread position:
               
29-187
               

               
Cow position:
               
chr3:83199662-83199503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
41, 68
               

               
Conread position:
               
29-219
               

               
Cow position:
               
chr3:8556692-8556875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
183, 48
               

               
Conread position:
               
29-426
               

               
Cow position:
               
chr3:53270982-53270588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
48, 125
               

               
Conread position:
               
32-203
               

               
Cow position:
               
chr3:19788685-19788854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
32-208
               

               
Cow position:
               
chr3:35239157-35238984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
109, 44
               

               
Conread position:
               
32-347
               

               
Cow position:
               
chr3:19793444-19793747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
260, 111
               

               
Conread position:
               
32-388
               

               
Cow position:
               
chr3:53094782-53095131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
53, 122
               

               
Conread position:
               
32-420
               

               
Cow position:
               
chr3:55010025-55010387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
176, 42
               

               
Conread position:
               
32-426
               

               
Cow position:
               
chr3:70334546-70334939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
55, 184
               

               
Conread position:
               
33-203
               

               
Cow position:
               
chr3:25289988-25289820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
33-226
               

               
Cow position:
               
chr3:16505339-16505523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
175, 52
               

               
Conread position:
               
33-413
               

               
Cow position:
               
chr3:74134852-74134480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 25
               

               
Conread position:
               
33-426
               

               
Cow position:
               
chr3:15388367-15387973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
41, 82
               

               
Conread position:
               
34-295
               

               
Cow position:
               
chr3:19626364-19626612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
67, 11
               

               
Conread position:
               
35-167
               

               
Cow position:
               
chr3:44782481-44782351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
106, 55
               

               
Conread position:
               
35-379
               

               
Cow position:
               
chr3:75687292-75687625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
40, 89
               

               
Conread position:
               
35-426
               

               
Cow position:
               
chr3:25690943-25690547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
50, 94
               

               
Conread position:
               
35-426
               

               
Cow position:
               
chr3:32585288-32584920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
174, 36
               

               
Conread position:
               
38-426
               

               
Cow position:
               
chr3:53572609-53572988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
38, 116
               

               
Conread position:
               
39-200
               

               
Cow position:
               
chr3:73421353-73421514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
101, 113
               

               
Conread position:
               
39-433
               

               
Cow position:
               
chr3:68627548-68627919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 37
               

               
Conread position:
               
41-387
               

               
Cow position:
               
chr3:15751577-15751917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
289, 49
               

               
Conread position:
               
41-388
               

               
Cow position:
               
chr3:11063504-11063187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
42, 72
               

               
Conread position:
               
41-416
               

               
Cow position:
               
chr3:68145714-68146064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
168, 30
               

               
Conread position:
               
41-426
               

               
Cow position:
               
chr3:6690140-6689756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
27, 83
               

               
Conread position:
               
41-428
               

               
Cow position:
               
chr3:14601566-14601954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
135, 140
               

               
Conread position:
               
42-223
               

               
Cow position:
               
chr3:32409356-32409167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
43-426
               

               
Cow position:
               
chr3:70565599-70565976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 181
               

               
Conread position:
               
48-388
               

               
Cow position:
               
chr3:61539934-61539605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
39, 112
               

               
Conread position:
               
50-426
               

               
Cow position:
               
chr3:73461093-73460740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
15, 5
               

               
Conread position:
               
51-426
               

               
Cow position:
               
chr3:28898092-28898461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
17, 165
               

               
Conread position:
               
51-426
               

               
Cow position:
               
chr3:73709174-73708811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
331, 55
               

               
Conread position:
               
55-215
               

               
Cow position:
               
chr3:21997664-21997825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
153, 0
               

               
Conread position:
               
55-367
               

               
Cow position:
               
chr3:79645304-79645617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
26, 188
               

               
Conread position:
               
55-388
               

               
Cow position:
               
chr3:4319832-4319519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
155, 47
               

               
Conread position:
               
58-416
               

               
Cow position:
               
chr3:82461296-82460956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
273, 20
               

               
Conread position:
               
58-421
               

               
Cow position:
               
chr3:14263515-14263159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
25, 62
               

               
Conread position:
               
63-291
               

               
Cow position:
               
chr3:15173197-15172980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
147, 0
               

               
Conread position:
               
63-337
               

               
Cow position:
               
chr3:20993931-20993667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
20, 156
               

               
Conread position:
               
63-388
               

               
Cow position:
               
chr3:36100952-36100637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
20, 62
               

               
Conread position:
               
63-420
               

               
Cow position:
               
chr3:52017887-52017525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
46, 59
               

               
Conread position:
               
63-426
               

               
Cow position:
               
chr3:8457772-8457417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
14, 82
               

               
Conread position:
               
63-426
               

               
Cow position:
               
chr3:64172558-64172207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
13, 150
               

               
Conread position:
               
63-427
               

               
Cow position:
               
chr3:81371766-81371417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 158
               

               
Conread position:
               
65-426
               

               
Cow position:
               
chr3:50069879-50069541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
36, 132
               

               
Conread position:
               
66-227
               

               
Cow position:
               
chr3:53508726-53508561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
66-240
               

               
Cow position:
               
chr3:82629428-82629254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
142, 40
               

               
Conread position:
               
66-247
               

               
Cow position:
               
chr3:44330324-44330505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
75, 86
               

               
Conread position:
               
66-324
               

               
Cow position:
               
chr3:84175711-84175957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
66-336
               

               
Cow position:
               
chr3:1785130-1785385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
10, 160
               

               
Conread position:
               
66-388
               

               
Cow position:
               
chr3:13507583-13507273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 160
               

               
Conread position:
               
66-421
               

               
Cow position:
               
chr3:67930072-67930411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 87
               

               
Conread position:
               
66-423
               

               
Cow position:
               
chr3:17447502-17447843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
143, 107
               

               
Conread position:
               
66-426
               

               
Cow position:
               
chr3:17934824-17935161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
23, 164
               

               
Conread position:
               
66-426
               

               
Cow position:
               
chr3:70900003-70899662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
143, 61
               

               
Conread position:
               
67-417
               

               
Cow position:
               
chr3:15192692-15192335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
64, 140
               

               
Conread position:
               
67-426
               

               
Cow position:
               
chr3:53113287-53112931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
42, 55
               

               
Conread position:
               
69-426
               

               
Cow position:
               
chr3:46901308-46900956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
24, 41
               

               
Conread position:
               
71-232
               

               
Cow position:
               
chr3:74801960-74802121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
69, 14
               

               
Conread position:
               
71-242
               

               
Cow position:
               
chr3:4481050-4480878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
136, 125
               

               
Conread position:
               
71-301
               

               
Cow position:
               
chr3:55984206-55983986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
70, 82
               

               
Conread position:
               
71-344
               

               
Cow position:
               
chr3:62789067-62789331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
139, 159
               

               
Conread position:
               
71-378
               

               
Cow position:
               
chr3:20677734-20678020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
138, 93
               

               
Conread position:
               
71-403
               

               
Cow position:
               
chr3:26874699-26874382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 111
               

               
Conread position:
               
71-423
               

               
Cow position:
               
chr3:78945731-78946071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
64, 115
               

               
Conread position:
               
71-426
               

               
Cow position:
               
chr3:12711807-12712161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
257, 147
               

               
Conread position:
               
71-444
               

               
Cow position:
               
chr3:27940035-27940385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
68, 81
               

               
Conread position:
               
72-223
               

               
Cow position:
               
chr3:38100250-38100096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
72-226
               

               
Cow position:
               
chr3:20334116-20333959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
72-303
               

               
Cow position:
               
chr3:6519860-6520084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
16, 63
               

               
Conread position:
               
72-353
               

               
Cow position:
               
chr3:74243099-74242835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
138, 30
               

               
Conread position:
               
72-388
               

               
Cow position:
               
chr3:15506554-15506256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 11
               

               
Conread position:
               
72-420
               

               
Cow position:
               
chr3:73442989-73443319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
138, 67
               

               
Conread position:
               
72-421
               

               
Cow position:
               
chr3:15752529-15752861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 69
               

               
Conread position:
               
72-423
               

               
Cow position:
               
chr3:3738588-3738249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
137, 92
               

               
Conread position:
               
72-426
               

               
Cow position:
               
chr3:49383055-49382714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
136, 24
               

               
Conread position:
               
73-423
               

               
Cow position:
               
chr3:67704652-67704305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 156
               

               
Conread position:
               
74-223
               

               
Cow position:
               
chr3:59920132-59919987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
67, 81
               

               
Conread position:
               
74-388
               

               
Cow position:
               
chr3:49460821-49461128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
136, 150
               

               
Conread position:
               
74-421
               

               
Cow position:
               
chr3:52863078-52863418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
37, 79
               

               
Conread position:
               
74-443
               

               
Cow position:
               
chr3:8394049-8393683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
14, 143
               

               
Conread position:
               
74-464
               

               
Cow position:
               
chr3:61144201-61143815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
14, 97
               

               
Conread position:
               
75-208
               

               
Cow position:
               
chr3:24372025-24371893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
75-387
               

               
Cow position:
               
chr3:66883841-66884135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
134, 15
               

               
Conread position:
               
75-388
               

               
Cow position:
               
chr3:55712544-55712234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
32, 42
               

               
Conread position:
               
75-417
               

               
Cow position:
               
chr3:59883964-59884296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
14, 156
               

               
Conread position:
               
75-426
               

               
Cow position:
               
chr3:55835716-55836067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 83
               

               
Conread position:
               
75-426
               

               
Cow position:
               
chr3:80053440-80053772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
73, 23
               

               
Conread position:
               
76-426
               

               
Cow position:
               
chr3:56059914-56059569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
131, 163
               

               
Conread position:
               
78-231
               

               
Cow position:
               
chr3:64648593-64648439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
129, 0
               

               
Conread position:
               
78-426
               

               
Cow position:
               
chr3:5100671-5100999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
105, 0
               

               
Conread position:
               
78-426
               

               
Cow position:
               
chr3:57624565-57624229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 140
               

               
Conread position:
               
78-444
               

               
Cow position:
               
chr3:14626049-14626410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
31, 44
               

               
Conread position:
               
79-311
               

               
Cow position:
               
chr3:63177582-63177360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
129, 23
               

               
Conread position:
               
79-361
               

               
Cow position:
               
chr3:75045776-75046045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
50, 75
               

               
Conread position:
               
79-388
               

               
Cow position:
               
chr3:53739085-53739381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
131, 147
               

               
Conread position:
               
79-389
               

               
Cow position:
               
chr3:63269323-63269030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
12, 28
               

               
Conread position:
               
79-423
               

               
Cow position:
               
chr3:116290-115972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
45, 133
               

               
Conread position:
               
79-423
               

               
Cow position:
               
chr3:45534193-45534535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 93
               

               
Conread position:
               
79-442
               

               
Cow position:
               
chr3:17895945-17895598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
304, 11
               

               
Conread position:
               
81-202
               

               
Cow position:
               
chr3:18001295-18001175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
59, 8
               

               
Conread position:
               
81-289
               

               
Cow position:
               
chr3:18607770-18607565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
23, 146
               

               
Conread position:
               
81-426
               

               
Cow position:
               
chr3:38691308-38691644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
249, 122
               

               
Conread position:
               
82-426
               

               
Cow position:
               
chr3:19006754-19006429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
296, 87
               

               
Conread position:
               
85-334
               

               
Cow position:
               
chr3:32610354-32610109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
63, 70
               

               
Conread position:
               
85-396
               

               
Cow position:
               
chr3:24352954-24352662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
56, 67
               

               
Conread position:
               
85-426
               

               
Cow position:
               
chr3:2216462-2216121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
24, 35
               

               
Conread position:
               
85-426
               

               
Cow position:
               
chr3:5365771-5365448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
289, 129
               

               
Conread position:
               
85-426
               

               
Cow position:
               
chr3:58767357-58767041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
124, 141
               

               
Conread position:
               
85-430
               

               
Cow position:
               
chr3:45647774-45647435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 70
               

               
Conread position:
               
86-247
               

               
Cow position:
               
chr3:20515725-20515887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
121, 143
               

               
Conread position:
               
86-416
               

               
Cow position:
               
chr3:34271007-34270701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
44, 92
               

               
Conread position:
               
86-426
               

               
Cow position:
               
chr3:26218960-26219300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 20
               

               
Conread position:
               
86-426
               

               
Cow position:
               
chr3:42423235-42423569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
124, 72
               

               
Conread position:
               
86-426
               

               
Cow position:
               
chr3:49650481-49650141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
23, 34
               

               
Conread position:
               
86-426
               

               
Cow position:
               
chr3:55271952-55272281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 140
               

               
Conread position:
               
86-426
               

               
Cow position:
               
chr3:59451697-59451356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
55, 134
               

               
Conread position:
               
87-426
               

               
Cow position:
               
chr3:25755112-25754798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
123, 52
               

               
Conread position:
               
87-426
               

               
Cow position:
               
chr3:29887328-29887662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 64
               

               
Conread position:
               
87-426
               

               
Cow position:
               
chr3:62826527-62826861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
101, 67
               

               
Conread position:
               
88-442
               

               
Cow position:
               
chr3:66292085-66292435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
120, 137
               

               
Conread position:
               
89-244
               

               
Cow position:
               
chr3:51349913-51349757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
119, 149
               

               
Conread position:
               
89-377
               

               
Cow position:
               
chr3:30222281-30222002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
95, 123
               

               
Conread position:
               
89-424
               

               
Cow position:
               
chr3:11712055-11711717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
241, 122
               

               
Conread position:
               
89-426
               

               
Cow position:
               
chr3:80581745-80581433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
241, 84
               

               
Conread position:
               
90-223
               

               
Cow position:
               
chr3:41652465-41652331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
118, 0
               

               
Conread position:
               
90-425
               

               
Cow position:
               
chr3:45648219-45647902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
293, 76
               

               
Conread position:
               
90-426
               

               
Cow position:
               
chr3:50614730-50614401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
52, 67
               

               
Conread position:
               
90-442
               

               
Cow position:
               
chr3:73764111-73764450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 67
               

               
Conread position:
               
91-205
               

               
Cow position:
               
chr3:16601530-16601416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
115
               

               
Alignm identity:
               
90
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
91-426
               

               
Cow position:
               
chr3:525434-525116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
292, 128
               

               
Conread position:
               
91-426
               

               
Cow position:
               
chr3:10347443-10347117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 82
               

               
Conread position:
               
91-426
               

               
Cow position:
               
chr3:79292916-79292596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
119, 74
               

               
Conread position:
               
91-426
               

               
Cow position:
               
chr3:83815700-83816031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
129, 49
               

               
Conread position:
               
93-382
               

               
Cow position:
               
chr3:34669647-34669917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
116, 104
               

               
Conread position:
               
93-442
               

               
Cow position:
               
chr3:59101913-59101581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
117, 84
               

               
Conread position:
               
96-291
               

               
Cow position:
               
chr3:64135801-64135616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
114, 133
               

               
Conread position:
               
96-359
               

               
Cow position:
               
chr3:73915725-73915970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
201, 47
               

               
Conread position:
               
96-388
               

               
Cow position:
               
chr3:49328026-49327746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 6
               

               
Conread position:
               
96-426
               

               
Cow position:
               
chr3:5097290-5096966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
114, 130
               

               
Conread position:
               
96-442
               

               
Cow position:
               
chr3:59799331-59798998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
111, 128
               

               
Conread position:
               
98-360
               

               
Cow position:
               
chr3:55109532-55109782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
122, 128
               

               
Conread position:
               
98-423
               

               
Cow position:
               
chr3:5374409-5374098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
112, 79
               

               
Conread position:
               
99-426
               

               
Cow position:
               
chr3:4032043-4031730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
20, 29
               

               
Conread position:
               
99-426
               

               
Cow position:
               
chr3:61840355-61840051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
99-426
               

               
Cow position:
               
chr3:72676171-72675849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
109, 119
               

               
Conread position:
               
100-289
               

               
Cow position:
               
chr3:3472119-3471941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
129, 0
               

               
Conread position:
               
100-426
               

               
Cow position:
               
chr3:56298-56609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
87, 73
               

               
Conread position:
               
100-426
               

               
Cow position:
               
chr3:58968824-58969134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 124
               

               
Conread position:
               
103-416
               

               
Cow position:
               
chr3:76015368-76015071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
39, 51
               

               
Conread position:
               
104-397
               

               
Cow position:
               
chr3:3638253-3637982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
37, 48
               

               
Conread position:
               
105-387
               

               
Cow position:
               
chr3:7940483-7940750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
33, 50
               

               
Conread position:
               
106-426
               

               
Cow position:
               
chr3:75711379-75711080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
108-423
               

               
Cow position:
               
chr3:23444817-23445125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 110
               

               
Conread position:
               
117-422
               

               
Cow position:
               
chr3:79220920-79220616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
112, 86
               

               
Conread position:
               
117-426
               

               
Cow position:
               
chr3:27290002-27289699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
24, 39
               

               
Conread position:
               
119-319
               

               
Cow position:
               
chr3:12670555-12670741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
89, 31
               

               
Conread position:
               
121-426
               

               
Cow position:
               
chr3:26553657-26553950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
20, 31
               

               
Conread position:
               
121-431
               

               
Cow position:
               
chr3:34937902-34937597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
89, 54
               

               
Conread position:
               
122-426
               

               
Cow position:
               
chr3:66609787-66610076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 61
               

               
Conread position:
               
124-423
               

               
Cow position:
               
chr3:65800640-65800358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
86, 49
               

               
Conread position:
               
125-388
               

               
Cow position:
               
chr3:73759463-73759711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
84, 41
               

               
Conread position:
               
125-426
               

               
Cow position:
               
chr3:81277638-81277941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
16, 107
               

               
Conread position:
               
126-387
               

               
Cow position:
               
chr3:74878536-74878784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
84, 100
               

               
Conread position:
               
126-391
               

               
Cow position:
               
chr3:12255531-12255280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
126-423
               

               
Cow position:
               
chr3:31046899-31047184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
251, 37
               

               
Conread position:
               
126-442
               

               
Cow position:
               
chr3:37452121-37451813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
176, 17
               

               
Conread position:
               
130-388
               

               
Cow position:
               
chr3:27696929-27697174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
80, 96
               

               
Conread position:
               
132-394
               

               
Cow position:
               
chr3:36446672-36446918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
5, 0
               

               
Conread position:
               
135-426
               

               
Cow position:
               
chr3:22820615-22820331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
238, 26
               

               
Conread position:
               
140-360
               

               
Cow position:
               
chr3:34294231-34294452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
69, 107
               

               
Conread position:
               
146-402
               

               
Cow position:
               
chr3:39328433-39328186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
184, 74
               

               
Conread position:
               
153-349
               

               
Cow position:
               
chr3:32183992-32184177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
153-388
               

               
Cow position:
               
chr3:33698757-33698530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
177, 60
               

               
Conread position:
               
153-388
               

               
Cow position:
               
chr3:70632047-70631823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
38, 80
               

               
Conread position:
               
153-397
               

               
Cow position:
               
chr3:77665744-77665980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
57, 37
               

               
Conread position:
               
153-446
               

               
Cow position:
               
chr3:14632957-14633247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
57, 69
               

               
Conread position:
               
154-423
               

               
Cow position:
               
chr3:17957492-17957231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
177, 75
               

               
Conread position:
               
155-426
               

               
Cow position:
               
chr3:83201500-83201766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
12, 64
               

               
Conread position:
               
156-426
               

               
Cow position:
               
chr3:5850906-5851166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
57, 68
               

               
Conread position:
               
156-426
               

               
Cow position:
               
chr3:21340938-21341202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
53, 25
               

               
Conread position:
               
161-388
               

               
Cow position:
               
chr3:18216747-18216957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
161-391
               

               
Cow position:
               
chr3:61009415-61009629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
30, 51
               

               
Conread position:
               
170-442
               

               
Cow position:
               
chr3:80081804-80082073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
38, 56
               

               
Conread position:
               
177-426
               

               
Cow position:
               
chr3:49793398-49793171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
36, 47
               

               
Conread position:
               
180-416
               

               
Cow position:
               
chr3:48629590-48629813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
124, 30
               

               
Conread position:
               
182-426
               

               
Cow position:
               
chr3:17450942-17451172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
26, 44
               

               
Conread position:
               
184-426
               

               
Cow position:
               
chr3:74409480-74409253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
26, 50
               

               
Conread position:
               
184-426
               

               
Cow position:
               
chr3:79207991-79208241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
26, 42
               

               
Conread position:
               
190-419
               

               
Cow position:
               
chr3:73590005-73590230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
19, 36
               

               
Conread position:
               
192-426
               

               
Cow position:
               
chr3:77496816-77496579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
18, 34
               

               
Conread position:
               
212-421
               

               
Cow position:
               
chr3:61190947-61191150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
17, 39
               

               
Conread position:
               
218-406
               

               
Cow position:
               
chr3:83396172-83395982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
32, 112
               

               
Conread position:
               
219-388
               

               
Cow position:
               
chr3:23092003-23092174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
232-426
               

               
Cow position:
               
chr3:47284792-47284599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
104, 18
               

               
Conread position:
               
233-388
               

               
Cow position:
               
chr3:34315998-34316155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
234-442
               

               
Cow position:
               
chr3:33327663-33327448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
73, 16
               

               
Conread position:
               
235-421
               

               
Cow position:
               
chr3:48578787-48578608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
156, 9
               

               
Conread position:
               
237-387
               

               
Cow position:
               
chr3:2198839-2198688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
238-388
               

               
Cow position:
               
chr3:43657755-43657902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
82, 24
               

               
Conread position:
               
238-426
               

               
Cow position:
               
chr3:45524220-45524026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
93, 24
               

               
Conread position:
               
238-442
               

               
Cow position:
               
chr3:81401352-81401560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
152, 71
               

               
Conread position:
               
239-432
               

               
Cow position:
               
chr3:29334558-29334758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
12, 23
               

               
Conread position:
               
240-409
               

               
Cow position:
               
chr3:45221745-45221921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
240-426
               

               
Cow position:
               
chr3:57764181-57763985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
241-382
               

               
Cow position:
               
chr3:27212313-27212173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
120, 0
               

               
Conread position:
               
245-387
               

               
Cow position:
               
chr3:49337671-49337533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
246-423
               

               
Cow position:
               
chr3:33252930-33253116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
246-426
               

               
Cow position:
               
chr3:72019060-72018881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
85, 30
               

               
Conread position:
               
247-412
               

               
Cow position:
               
chr3:56711697-56711859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
57, 132
               

               
Conread position:
               
247-426
               

               
Cow position:
               
chr3:79148323-79148514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
247-438
               

               
Cow position:
               
chr3:2483392-2483201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
39, 34
               

               
Conread position:
               
249-383
               

               
Cow position:
               
chr3:68156678-68156551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
249-426
               

               
Cow position:
               
chr3:20802680-20802868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
88, 30
               

               
Conread position:
               
249-426
               

               
Cow position:
               
chr3:49731697-49731876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
79, 102
               

               
Conread position:
               
249-426
               

               
Cow position:
               
chr3:69961772-69961949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
134, 20
               

               
Conread position:
               
250-388
               

               
Cow position:
               
chr3:10896773-10896637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
250-388
               

               
Cow position:
               
chr3:19789172-19789310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
97, 48
               

               
Conread position:
               
250-388
               

               
Cow position:
               
chr3:27532714-27532853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
250-388
               

               
Cow position:
               
chr3:53509742-53509877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
250-388
               

               
Cow position:
               
chr3:53588443-53588582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
250-413
               

               
Cow position:
               
chr3:56301402-56301573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
136, 18
               

               
Conread position:
               
250-421
               

               
Cow position:
               
chr3:20437709-20437879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
133, 48
               

               
Conread position:
               
250-421
               

               
Cow position:
               
chr3:84000556-84000379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
250-423
               

               
Cow position:
               
chr3:7365941-7366110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
137, 51
               

               
Conread position:
               
250-426
               

               
Cow position:
               
chr3:13577246-13577424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
139, 37
               

               
Conread position:
               
250-468
               

               
Cow position:
               
chr3:12576358-12576577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
56, 117
               

               
Conread position:
               
251-386
               

               
Cow position:
               
chr3:8790649-8790784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
62, 79
               

               
Conread position:
               
251-388
               

               
Cow position:
               
chr3:7331171-7331308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
251-397
               

               
Cow position:
               
chr3:30940755-30940616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
6, 63
               

               
Conread position:
               
251-411
               

               
Cow position:
               
chr3:60265299-60265459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
50, 129
               

               
Conread position:
               
251-413
               

               
Cow position:
               
chr3:20129887-20129717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
251-414
               

               
Cow position:
               
chr3:82703466-82703307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
58, 73
               

               
Conread position:
               
251-420
               

               
Cow position:
               
chr3:2630736-2630571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
124, 0
               

               
Conread position:
               
251-426
               

               
Cow position:
               
chr3:15080804-15080977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
127, 62
               

               
Conread position:
               
251-426
               

               
Cow position:
               
chr3:15158984-15158803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
251-426
               

               
Cow position:
               
chr3:18459580-18459758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
77, 9
               

               
Conread position:
               
251-426
               

               
Cow position:
               
chr3:30055505-30055684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
82, 30
               

               
Conread position:
               
251-426
               

               
Cow position:
               
chr3:31501291-31501109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
126, 9
               

               
Conread position:
               
251-429
               

               
Cow position:
               
chr3:15057667-15057839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
132, 59
               

               
Conread position:
               
251-432
               

               
Cow position:
               
chr3:31419644-31419457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
252-374
               

               
Cow position:
               
chr3:16891239-16891117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
83, 63
               

               
Conread position:
               
252-387
               

               
Cow position:
               
chr3:78739796-78739667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
252-388
               

               
Cow position:
               
chr3:15859728-15859862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
252-407
               

               
Cow position:
               
chr3:83691782-83691942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
252-414
               

               
Cow position:
               
chr3:26960649-26960821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
252-416
               

               
Cow position:
               
chr3:26970768-26970597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
128, 0
               

               
Conread position:
               
252-423
               

               
Cow position:
               
chr3:15661759-15661935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
78, 107
               

               
Conread position:
               
252-423
               

               
Cow position:
               
chr3:42178099-42177923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
78, 111
               

               
Conread position:
               
252-423
               

               
Cow position:
               
chr3:67044159-67044332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
144, 55
               

               
Conread position:
               
252-426
               

               
Cow position:
               
chr3:17952597-17952418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
252-426
               

               
Cow position:
               
chr3:22872106-22872290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
252-426
               

               
Cow position:
               
chr3:25691695-25691511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
69, 107
               

               
Conread position:
               
252-426
               

               
Cow position:
               
chr3:29807406-29807224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
128, 112
               

               
Conread position:
               
252-426
               

               
Cow position:
               
chr3:29813185-29813005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
109, 0
               

               
Conread position:
               
252-426
               

               
Cow position:
               
chr3:39171542-39171722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
110, 0
               

               
Conread position:
               
252-426
               

               
Cow position:
               
chr3:41328387-41328217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
252-426
               

               
Cow position:
               
chr3:41367045-41367222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
131, 76
               

               
Conread position:
               
252-426
               

               
Cow position:
               
chr3:43528302-43528475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
137, 62
               

               
Conread position:
               
252-426
               

               
Cow position:
               
chr3:44534819-44535005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
252-426
               

               
Cow position:
               
chr3:45312990-45312815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
80, 31
               

               
Conread position:
               
252-426
               

               
Cow position:
               
chr3:48269802-48269625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
138, 45
               

               
Conread position:
               
252-426
               

               
Cow position:
               
chr3:48296650-48296471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
118, 0
               

               
Conread position:
               
252-426
               

               
Cow position:
               
chr3:57553910-57554084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
137, 74
               

               
Conread position:
               
252-426
               

               
Cow position:
               
chr3:59630561-59630737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
131, 107
               

               
Conread position:
               
252-426
               

               
Cow position:
               
chr3:63860951-63861139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
84, 33
               

               
Conread position:
               
252-426
               

               
Cow position:
               
chr3:71430266-71430450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
252-426
               

               
Cow position:
               
chr3:77006433-77006267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
112, 19
               

               
Conread position:
               
252-426
               

               
Cow position:
               
chr3:77227263-77227080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
140, 0
               

               
Conread position:
               
252-426
               

               
Cow position:
               
chr3:79591941-79592127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
252-426
               

               
Cow position:
               
chr3:83441942-83442118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
111, 31
               

               
Conread position:
               
252-432
               

               
Cow position:
               
chr3:4861624-4861444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
137, 22
               

               
Conread position:
               
252-440
               

               
Cow position:
               
chr3:27544392-27544581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
80, 59
               

               
Conread position:
               
252-442
               

               
Cow position:
               
chr3:9843527-9843327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
14, 36
               

               
Conread position:
               
252-442
               

               
Cow position:
               
chr3:59515044-59514855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
176, 19
               

               
Conread position:
               
252-442
               

               
Cow position:
               
chr3:82657144-82657341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
66, 82
               

               
Conread position:
               
252-453
               

               
Cow position:
               
chr3:74088229-74088441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
81, 46
               

               
Conread position:
               
252-455
               

               
Cow position:
               
chr3:4087223-4087436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
253-352
               

               
Cow position:
               
chr3:18056383-18056284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
100
               

               
Alignm identity:
               
82
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
253-371
               

               
Cow position:
               
chr3:36418527-36418644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
253-423
               

               
Cow position:
               
chr3:35283150-35283333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
6, 0
               

               
Conread position:
               
253-426
               

               
Cow position:
               
chr3:8604074-8604252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
133, 0
               

               
Conread position:
               
253-426
               

               
Cow position:
               
chr3:59271480-59271313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
254-386
               

               
Cow position:
               
chr3:81473949-81473816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
50, 102
               

               
Conread position:
               
254-388
               

               
Cow position:
               
chr3:48371075-48370940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
254-426
               

               
Cow position:
               
chr3:6853566-6853739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
76, 110
               

               
Conread position:
               
254-426
               

               
Cow position:
               
chr3:61678633-61678453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
255-422
               

               
Cow position:
               
chr3:45881841-45881675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
128, 42
               

               
Conread position:
               
255-423
               

               
Cow position:
               
chr3:78782901-78782739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
255-426
               

               
Cow position:
               
chr3:42588295-42588111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
255-426
               

               
Cow position:
               
chr3:69750764-69750938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
120, 71
               

               
Conread position:
               
256-403
               

               
Cow position:
               
chr3:49140105-49140251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
122, 0
               

               
Conread position:
               
256-426
               

               
Cow position:
               
chr3:7678605-7678433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
256-442
               

               
Cow position:
               
chr3:18558108-18557928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
130, 41
               

               
Conread position:
               
257-400
               

               
Cow position:
               
chr3:65381085-65380946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
79, 14
               

               
Conread position:
               
258-423
               

               
Cow position:
               
chr3:26894596-26894426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
121, 0
               

               
Conread position:
               
258-426
               

               
Cow position:
               
chr3:83921132-83920960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
79, 43
               

               
Conread position:
               
259-379
               

               
Cow position:
               
chr3:4082160-4082281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
123
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
43, 12
               

               
Conread position:
               
259-422
               

               
Cow position:
               
chr3:79902440-79902269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
259-426
               

               
Cow position:
               
chr3:22171121-22170952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
260-458
               

               
Cow position:
               
chr3:23270031-23269830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
262-388
               

               
Cow position:
               
chr3:38828699-38828571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
262-426
               

               
Cow position:
               
chr3:61857434-61857258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
263-415
               

               
Cow position:
               
chr3:61361336-61361181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
68, 145
               

               
Conread position:
               
263-442
               

               
Cow position:
               
chr3:58383896-58383712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
114, 30
               

               
Conread position:
               
264-387
               

               
Cow position:
               
chr3:48211418-48211298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
265-426
               

               
Cow position:
               
chr3:18855023-18854855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
267-426
               

               
Cow position:
               
chr3:68583076-68583241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
268-426
               

               
Cow position:
               
chr3:42483826-42483662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
269-426
               

               
Cow position:
               
chr3:16004066-16004224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
119, 0
               

               
Conread position:
               
269-426
               

               
Cow position:
               
chr3:48852037-48852206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
271-423
               

               
Cow position:
               
chr3:35074605-35074446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
114, 0
               

               
Conread position:
               
274-426
               

               
Cow position:
               
chr3:8147749-8147903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
274-426
               

               
Cow position:
               
chr3:18393469-18393622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
109, 0
               

               
Conread position:
               
277-426
               

               
Cow position:
               
chr3:8556869-8557019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
115, 108
               

               
Conread position:
               
284-421
               

               
Cow position:
               
chr3:79196471-79196611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
285-420
               

               
Cow position:
               
chr3:13329870-13330005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
98, 77
               

               
Conread position:
               
285-426
               

               
Cow position:
               
chr3:51609729-51609578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
288-388
               

               
Cow position:
               
chr3:5082733-5082833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
101
               

               
Alignm identity:
               
87
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
291-426
               

               
Cow position:
               
chr3:22716379-22716518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
88, 9
               

               
Conread position:
               
291-426
               

               
Cow position:
               
chr3:23416967-23417106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
86, 12
               

               
Conread position:
               
297-386
               

               
Cow position:
               
chr3:14800934-14801023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
90
               

               
Alignm identity:
               
77
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
302-426
               

               
Cow position:
               
chr3:84368481-84368608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
28, 0
               
Show alignments to all cow chromosomes.