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Cow genome map

           
Conread name:
           
LyN1-MLN01E020019
        

               
Conread position:
               
1-145
               

               
Cow position:
               
chr4:62820861-62821005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
29, 86
               

               
Conread position:
               
1-182
               

               
Cow position:
               
chr4:23271479-23271296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
1-188
               

               
Cow position:
               
chr4:3519614-3519429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
29, 72
               

               
Conread position:
               
1-195
               

               
Cow position:
               
chr4:30769228-30769036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
9, 73
               

               
Conread position:
               
1-199
               

               
Cow position:
               
chr4:13508044-13508246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
29, 85
               

               
Conread position:
               
1-211
               

               
Cow position:
               
chr4:45483999-45483782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
29, 125
               

               
Conread position:
               
1-213
               

               
Cow position:
               
chr4:21161300-21161087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
29, 79
               

               
Conread position:
               
1-214
               

               
Cow position:
               
chr4:61608772-61608984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
9, 72
               

               
Conread position:
               
1-215
               

               
Cow position:
               
chr4:40995930-40995711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
9, 174
               

               
Conread position:
               
1-216
               

               
Cow position:
               
chr4:33838609-33838821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
29, 9
               

               
Conread position:
               
1-216
               

               
Cow position:
               
chr4:47305277-47305056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
1-216
               

               
Cow position:
               
chr4:69290546-69290764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
1-223
               

               
Cow position:
               
chr4:65753043-65753279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
69, 38
               

               
Conread position:
               
1-226
               

               
Cow position:
               
chr4:17851065-17851284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
5, 16
               

               
Conread position:
               
1-226
               

               
Cow position:
               
chr4:19199087-19199318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
9, 121
               

               
Conread position:
               
1-226
               

               
Cow position:
               
chr4:25356135-25356349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
29, 53
               

               
Conread position:
               
1-226
               

               
Cow position:
               
chr4:46404716-46404935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
172, 33
               

               
Conread position:
               
1-227
               

               
Cow position:
               
chr4:19333578-19333353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
207, 29
               

               
Conread position:
               
1-228
               

               
Cow position:
               
chr4:36841455-36841237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
140, 12
               

               
Conread position:
               
1-231
               

               
Cow position:
               
chr4:386198-386427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
11, 118
               

               
Conread position:
               
1-240
               

               
Cow position:
               
chr4:12442103-12441849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
28, 9
               

               
Conread position:
               
1-240
               

               
Cow position:
               
chr4:13241833-13241579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
28, 8
               

               
Conread position:
               
1-240
               

               
Cow position:
               
chr4:59001943-59002183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
29, 163
               

               
Conread position:
               
1-242
               

               
Cow position:
               
chr4:8182439-8182686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
32, 244
               

               
Conread position:
               
1-242
               

               
Cow position:
               
chr4:68456721-68456967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
38, 29
               

               
Conread position:
               
1-283
               

               
Cow position:
               
chr4:34510024-34509764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
206, 29
               

               
Conread position:
               
1-298
               

               
Cow position:
               
chr4:19292910-19292631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
9, 80
               

               
Conread position:
               
1-301
               

               
Cow position:
               
chr4:44772841-44773138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
8, 231
               

               
Conread position:
               
1-304
               

               
Cow position:
               
chr4:32693984-32693689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
14, 87
               

               
Conread position:
               
1-332
               

               
Cow position:
               
chr4:12474047-12473727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
11, 151
               

               
Conread position:
               
1-338
               

               
Cow position:
               
chr4:38946414-38946079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
30, 173
               

               
Conread position:
               
1-360
               

               
Cow position:
               
chr4:14153311-14152937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 33
               

               
Conread position:
               
1-384
               

               
Cow position:
               
chr4:27632637-27632278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
9, 108
               

               
Conread position:
               
1-387
               

               
Cow position:
               
chr4:38944063-38944439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 86
               

               
Conread position:
               
1-416
               

               
Cow position:
               
chr4:31505822-31506242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
9, 158
               

               
Conread position:
               
1-422
               

               
Cow position:
               
chr4:85889-85477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 79
               

               
Conread position:
               
1-423
               

               
Cow position:
               
chr4:51728269-51727865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 84
               

               
Conread position:
               
1-426
               

               
Cow position:
               
chr4:22138021-22138458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 221
               

               
Conread position:
               
1-426
               

               
Cow position:
               
chr4:28771875-28772289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 71
               

               
Conread position:
               
1-426
               

               
Cow position:
               
chr4:41867643-41867222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 133
               

               
Conread position:
               
1-426
               

               
Cow position:
               
chr4:43909958-43909530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 7
               

               
Conread position:
               
1-426
               

               
Cow position:
               
chr4:56239669-56240067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
96, 29
               

               
Conread position:
               
1-429
               

               
Cow position:
               
chr4:15635255-15635668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
9, 72
               

               
Conread position:
               
2-188
               

               
Cow position:
               
chr4:50494973-50494779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
2-356
               

               
Cow position:
               
chr4:20124774-20125137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
29, 71
               

               
Conread position:
               
2-423
               

               
Cow position:
               
chr4:37691117-37691527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
76, 33
               

               
Conread position:
               
3-161
               

               
Cow position:
               
chr4:12908562-12908408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
26, 70
               

               
Conread position:
               
3-165
               

               
Cow position:
               
chr4:65463320-65463478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
27, 70
               

               
Conread position:
               
3-166
               

               
Cow position:
               
chr4:61524622-61524462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
26, 7
               

               
Conread position:
               
3-167
               

               
Cow position:
               
chr4:12713840-12713998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
133, 7
               

               
Conread position:
               
3-170
               

               
Cow position:
               
chr4:27657165-27657002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
27, 83
               

               
Conread position:
               
3-176
               

               
Cow position:
               
chr4:66122176-66122347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
27, 62
               

               
Conread position:
               
3-194
               

               
Cow position:
               
chr4:51083147-51083336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
27, 85
               

               
Conread position:
               
3-198
               

               
Cow position:
               
chr4:61887834-61887634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
23, 174
               

               
Conread position:
               
3-214
               

               
Cow position:
               
chr4:39007690-39007489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
3-222
               

               
Cow position:
               
chr4:68590962-68590750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
27, 57
               

               
Conread position:
               
3-227
               

               
Cow position:
               
chr4:6093869-6094098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
9, 120
               

               
Conread position:
               
3-227
               

               
Cow position:
               
chr4:19431497-19431727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
26, 56
               

               
Conread position:
               
3-231
               

               
Cow position:
               
chr4:24810258-24810485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
27, 79
               

               
Conread position:
               
3-245
               

               
Cow position:
               
chr4:28701538-28701309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
204, 31
               

               
Conread position:
               
3-252
               

               
Cow position:
               
chr4:16221678-16221938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
3-311
               

               
Cow position:
               
chr4:69455435-69455727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
27, 78
               

               
Conread position:
               
3-324
               

               
Cow position:
               
chr4:214203-213904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
204, 42
               

               
Conread position:
               
3-361
               

               
Cow position:
               
chr4:48409092-48409418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
28, 70
               

               
Conread position:
               
3-388
               

               
Cow position:
               
chr4:4318962-4319324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 6
               

               
Conread position:
               
3-388
               

               
Cow position:
               
chr4:51851406-51851022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 85
               

               
Conread position:
               
3-410
               

               
Cow position:
               
chr4:65919811-65919411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 151
               

               
Conread position:
               
3-426
               

               
Cow position:
               
chr4:22009874-22010281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
205, 15
               

               
Conread position:
               
3-426
               

               
Cow position:
               
chr4:23846862-23847273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 6
               

               
Conread position:
               
3-426
               

               
Cow position:
               
chr4:47731056-47730640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 6
               

               
Conread position:
               
3-426
               

               
Cow position:
               
chr4:62472268-62471846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 12
               

               
Conread position:
               
4-168
               

               
Cow position:
               
chr4:30944146-30943982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
26, 74
               

               
Conread position:
               
4-171
               

               
Cow position:
               
chr4:17051092-17051261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
26, 63
               

               
Conread position:
               
4-197
               

               
Cow position:
               
chr4:37991781-37991591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
26, 88
               

               
Conread position:
               
4-220
               

               
Cow position:
               
chr4:21506772-21506981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
16, 61
               

               
Conread position:
               
4-325
               

               
Cow position:
               
chr4:38156901-38157207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 66
               

               
Conread position:
               
4-356
               

               
Cow position:
               
chr4:20026911-20027248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 74
               

               
Conread position:
               
4-359
               

               
Cow position:
               
chr4:68889387-68889707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
204, 23
               

               
Conread position:
               
4-369
               

               
Cow position:
               
chr4:36290814-36290468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 72
               

               
Conread position:
               
4-424
               

               
Cow position:
               
chr4:19745062-19744663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 63
               

               
Conread position:
               
4-426
               

               
Cow position:
               
chr4:10915640-10916064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 49
               

               
Conread position:
               
4-426
               

               
Cow position:
               
chr4:21531448-21531863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 168
               

               
Conread position:
               
4-426
               

               
Cow position:
               
chr4:27530304-27529891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
206, 31
               

               
Conread position:
               
4-426
               

               
Cow position:
               
chr4:34631099-34630679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 231
               

               
Conread position:
               
4-426
               

               
Cow position:
               
chr4:59871672-59871271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
26, 12
               

               
Conread position:
               
4-442
               

               
Cow position:
               
chr4:53134789-53134371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
25, 66
               

               
Conread position:
               
5-130
               

               
Cow position:
               
chr4:5276267-5276392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
88, 29
               

               
Conread position:
               
5-133
               

               
Cow position:
               
chr4:19496788-19496918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
25, 88
               

               
Conread position:
               
5-139
               

               
Cow position:
               
chr4:34544496-34544363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
25, 62
               

               
Conread position:
               
5-144
               

               
Cow position:
               
chr4:19504113-19503980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
5-145
               

               
Cow position:
               
chr4:42608930-42608789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
24, 83
               

               
Conread position:
               
5-167
               

               
Cow position:
               
chr4:28854085-28854246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
24, 81
               

               
Conread position:
               
5-167
               

               
Cow position:
               
chr4:56307993-56307831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
83, 25
               

               
Conread position:
               
5-174
               

               
Cow position:
               
chr4:34919083-34919248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
25, 75
               

               
Conread position:
               
5-178
               

               
Cow position:
               
chr4:51617805-51617981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
5-186
               

               
Cow position:
               
chr4:62794165-62794355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
5-187
               

               
Cow position:
               
chr4:58045441-58045626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
25, 116
               

               
Conread position:
               
5-189
               

               
Cow position:
               
chr4:47048305-47048124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
5-191
               

               
Cow position:
               
chr4:39010244-39010054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
25, 16
               

               
Conread position:
               
5-194
               

               
Cow position:
               
chr4:54785739-54785925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
20, 69
               

               
Conread position:
               
5-195
               

               
Cow position:
               
chr4:56410536-56410346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
25, 84
               

               
Conread position:
               
5-197
               

               
Cow position:
               
chr4:32602018-32601836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
6, 69
               

               
Conread position:
               
5-203
               

               
Cow position:
               
chr4:30691193-30690996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
25, 87
               

               
Conread position:
               
5-204
               

               
Cow position:
               
chr4:56395707-56395504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
25, 187
               

               
Conread position:
               
5-208
               

               
Cow position:
               
chr4:29317877-29318088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
5-215
               

               
Cow position:
               
chr4:43916484-43916268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
25, 78
               

               
Conread position:
               
5-215
               

               
Cow position:
               
chr4:49158601-49158819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
26, 154
               

               
Conread position:
               
5-215
               

               
Cow position:
               
chr4:60363542-60363330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
25, 11
               

               
Conread position:
               
5-215
               

               
Cow position:
               
chr4:60527371-60527160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
25, 5
               

               
Conread position:
               
5-216
               

               
Cow position:
               
chr4:18098870-18099083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
25, 93
               

               
Conread position:
               
5-226
               

               
Cow position:
               
chr4:5728022-5727813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
25, 76
               

               
Conread position:
               
5-226
               

               
Cow position:
               
chr4:19700298-19700067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
25, 169
               

               
Conread position:
               
5-226
               

               
Cow position:
               
chr4:46435525-46435294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
25, 229
               

               
Conread position:
               
5-227
               

               
Cow position:
               
chr4:19578574-19578358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
136, 29
               

               
Conread position:
               
5-227
               

               
Cow position:
               
chr4:23600360-23600137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
41, 216
               

               
Conread position:
               
5-231
               

               
Cow position:
               
chr4:10558727-10558500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
25, 98
               

               
Conread position:
               
5-231
               

               
Cow position:
               
chr4:60302824-60303051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
25, 71
               

               
Conread position:
               
5-239
               

               
Cow position:
               
chr4:69169840-69169604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
25, 222
               

               
Conread position:
               
5-244
               

               
Cow position:
               
chr4:35638715-35638951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
24, 58
               

               
Conread position:
               
5-286
               

               
Cow position:
               
chr4:60719283-60719022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
204, 53
               

               
Conread position:
               
5-305
               

               
Cow position:
               
chr4:46566280-46566571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
25, 83
               

               
Conread position:
               
5-317
               

               
Cow position:
               
chr4:65173293-65172981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
25, 82
               

               
Conread position:
               
5-331
               

               
Cow position:
               
chr4:19430550-19430239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
48, 20
               

               
Conread position:
               
5-347
               

               
Cow position:
               
chr4:37732288-37732626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
26, 157
               

               
Conread position:
               
5-360
               

               
Cow position:
               
chr4:19119210-19118855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 73
               

               
Conread position:
               
5-374
               

               
Cow position:
               
chr4:41370750-41371105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
25, 68
               

               
Conread position:
               
5-382
               

               
Cow position:
               
chr4:20147376-20147012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 208
               

               
Conread position:
               
5-388
               

               
Cow position:
               
chr4:275635-275284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
25, 87
               

               
Conread position:
               
5-388
               

               
Cow position:
               
chr4:13344727-13344367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 82
               

               
Conread position:
               
5-388
               

               
Cow position:
               
chr4:48152180-48152543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 163
               

               
Conread position:
               
5-388
               

               
Cow position:
               
chr4:51899212-51898828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
25, 162
               

               
Conread position:
               
5-390
               

               
Cow position:
               
chr4:62983367-62983731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 158
               

               
Conread position:
               
5-410
               

               
Cow position:
               
chr4:51769296-51768906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
25, 36
               

               
Conread position:
               
5-415
               

               
Cow position:
               
chr4:23526887-23526486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
39, 25
               

               
Conread position:
               
5-415
               

               
Cow position:
               
chr4:48322228-48321817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 70
               

               
Conread position:
               
5-423
               

               
Cow position:
               
chr4:7430494-7430099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
148, 19
               

               
Conread position:
               
5-426
               

               
Cow position:
               
chr4:656617-657040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 83
               

               
Conread position:
               
5-426
               

               
Cow position:
               
chr4:1015262-1014845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
25, 113
               

               
Conread position:
               
5-426
               

               
Cow position:
               
chr4:3688120-3687706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 68
               

               
Conread position:
               
5-426
               

               
Cow position:
               
chr4:4084266-4084668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 68
               

               
Conread position:
               
5-426
               

               
Cow position:
               
chr4:4186308-4185899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
29, 83
               

               
Conread position:
               
5-426
               

               
Cow position:
               
chr4:11099470-11099891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 34
               

               
Conread position:
               
5-426
               

               
Cow position:
               
chr4:12591029-12591433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
205, 10
               

               
Conread position:
               
5-426
               

               
Cow position:
               
chr4:12676986-12676590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 74
               

               
Conread position:
               
5-426
               

               
Cow position:
               
chr4:13693483-13693900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 89
               

               
Conread position:
               
5-426
               

               
Cow position:
               
chr4:26659491-26659083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 82
               

               
Conread position:
               
5-426
               

               
Cow position:
               
chr4:29291697-29291300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
25, 60
               

               
Conread position:
               
5-426
               

               
Cow position:
               
chr4:30974525-30974114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
25, 96
               

               
Conread position:
               
5-426
               

               
Cow position:
               
chr4:31023640-31023219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
25, 122
               

               
Conread position:
               
5-426
               

               
Cow position:
               
chr4:31136946-31136533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 69
               

               
Conread position:
               
5-426
               

               
Cow position:
               
chr4:34310274-34310677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
325, 25
               

               
Conread position:
               
5-426
               

               
Cow position:
               
chr4:34641532-34641951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 118
               

               
Conread position:
               
5-426
               

               
Cow position:
               
chr4:37343311-37342895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
25, 75
               

               
Conread position:
               
5-426
               

               
Cow position:
               
chr4:49629677-49629275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
25, 155
               

               
Conread position:
               
5-426
               

               
Cow position:
               
chr4:49794841-49794457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
25, 65
               

               
Conread position:
               
5-426
               

               
Cow position:
               
chr4:52748271-52748680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 44
               

               
Conread position:
               
5-426
               

               
Cow position:
               
chr4:66547572-66547975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 225
               

               
Conread position:
               
5-430
               

               
Cow position:
               
chr4:21065216-21064813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 68
               

               
Conread position:
               
5-442
               

               
Cow position:
               
chr4:4084917-4085376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 230
               

               
Conread position:
               
5-442
               

               
Cow position:
               
chr4:33970714-33971136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 11
               

               
Conread position:
               
5-442
               

               
Cow position:
               
chr4:65825633-65826096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
25, 149
               

               
Conread position:
               
5-443
               

               
Cow position:
               
chr4:18095470-18095920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
58, 152
               

               
Conread position:
               
6-188
               

               
Cow position:
               
chr4:5132535-5132341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
6-226
               

               
Cow position:
               
chr4:44854097-44854321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
24, 85
               

               
Conread position:
               
6-426
               

               
Cow position:
               
chr4:3341145-3340729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 222
               

               
Conread position:
               
6-426
               

               
Cow position:
               
chr4:30574651-30574234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 19
               

               
Conread position:
               
6-426
               

               
Cow position:
               
chr4:35982188-35981767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 74
               

               
Conread position:
               
6-426
               

               
Cow position:
               
chr4:48486186-48485778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 148
               

               
Conread position:
               
9-168
               

               
Cow position:
               
chr4:51026538-51026377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
21, 78
               

               
Conread position:
               
9-174
               

               
Cow position:
               
chr4:22215326-22215489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
21, 57
               

               
Conread position:
               
9-174
               

               
Cow position:
               
chr4:22331307-22331146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
9-175
               

               
Cow position:
               
chr4:38940755-38940922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
21, 80
               

               
Conread position:
               
9-175
               

               
Cow position:
               
chr4:43579229-43579392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
9-195
               

               
Cow position:
               
chr4:42373968-42374155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
21, 69
               

               
Conread position:
               
9-203
               

               
Cow position:
               
chr4:561818-561625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
21, 71
               

               
Conread position:
               
9-208
               

               
Cow position:
               
chr4:19496687-19496482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
9-208
               

               
Cow position:
               
chr4:41907395-41907594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
21, 78
               

               
Conread position:
               
9-211
               

               
Cow position:
               
chr4:14020686-14020485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
21, 98
               

               
Conread position:
               
9-214
               

               
Cow position:
               
chr4:67393282-67393072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
9-221
               

               
Cow position:
               
chr4:69497300-69497087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
199, 25
               

               
Conread position:
               
9-226
               

               
Cow position:
               
chr4:11969641-11969425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
19, 39
               

               
Conread position:
               
9-240
               

               
Cow position:
               
chr4:38209788-38210021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
21, 69
               

               
Conread position:
               
9-301
               

               
Cow position:
               
chr4:19102689-19102977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
21, 221
               

               
Conread position:
               
9-324
               

               
Cow position:
               
chr4:46494488-46494181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
199, 31
               

               
Conread position:
               
9-335
               

               
Cow position:
               
chr4:34699857-34700164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
21, 64
               

               
Conread position:
               
9-340
               

               
Cow position:
               
chr4:52831828-52832149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
21, 70
               

               
Conread position:
               
9-347
               

               
Cow position:
               
chr4:21874365-21874036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
21, 146
               

               
Conread position:
               
9-354
               

               
Cow position:
               
chr4:37313354-37313025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
59, 19
               

               
Conread position:
               
9-355
               

               
Cow position:
               
chr4:54927243-54927586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 235
               

               
Conread position:
               
9-374
               

               
Cow position:
               
chr4:19500901-19501249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 44
               

               
Conread position:
               
9-387
               

               
Cow position:
               
chr4:21391632-21391991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
201, 26
               

               
Conread position:
               
9-388
               

               
Cow position:
               
chr4:3421811-3421448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 219
               

               
Conread position:
               
9-388
               

               
Cow position:
               
chr4:42423621-42423977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
199, 16
               

               
Conread position:
               
9-393
               

               
Cow position:
               
chr4:17186161-17186537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 170
               

               
Conread position:
               
9-409
               

               
Cow position:
               
chr4:34022399-34022787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 81
               

               
Conread position:
               
9-412
               

               
Cow position:
               
chr4:28839797-28839418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 60
               

               
Conread position:
               
9-413
               

               
Cow position:
               
chr4:45589408-45589800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
76, 31
               

               
Conread position:
               
9-413
               

               
Cow position:
               
chr4:46527191-46526791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
21, 110
               

               
Conread position:
               
9-414
               

               
Cow position:
               
chr4:23444851-23445263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 126
               

               
Conread position:
               
9-421
               

               
Cow position:
               
chr4:38935545-38935141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 25
               

               
Conread position:
               
9-422
               

               
Cow position:
               
chr4:508725-509116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
325, 25
               

               
Conread position:
               
9-423
               

               
Cow position:
               
chr4:3283267-3283668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 78
               

               
Conread position:
               
9-423
               

               
Cow position:
               
chr4:23450903-23451315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
21, 222
               

               
Conread position:
               
9-423
               

               
Cow position:
               
chr4:27276358-27276760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
314, 62
               

               
Conread position:
               
9-423
               

               
Cow position:
               
chr4:59277287-59277699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 158
               

               
Conread position:
               
9-426
               

               
Cow position:
               
chr4:11897115-11897521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
20, 142
               

               
Conread position:
               
9-426
               

               
Cow position:
               
chr4:19315820-19316222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
21, 82
               

               
Conread position:
               
9-426
               

               
Cow position:
               
chr4:19597145-19597537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 61
               

               
Conread position:
               
9-426
               

               
Cow position:
               
chr4:37915151-37915552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 64
               

               
Conread position:
               
9-426
               

               
Cow position:
               
chr4:56591229-56590808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
21, 115
               

               
Conread position:
               
9-426
               

               
Cow position:
               
chr4:59785507-59785095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 64
               

               
Conread position:
               
9-426
               

               
Cow position:
               
chr4:68234150-68233756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 25
               

               
Conread position:
               
9-442
               

               
Cow position:
               
chr4:19709130-19708701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
21, 171
               

               
Conread position:
               
10-305
               

               
Cow position:
               
chr4:44183934-44184207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
20, 50
               

               
Conread position:
               
10-337
               

               
Cow position:
               
chr4:1419410-1419094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
20, 57
               

               
Conread position:
               
10-376
               

               
Cow position:
               
chr4:1026052-1026392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
85, 24
               

               
Conread position:
               
10-402
               

               
Cow position:
               
chr4:19407805-19408198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 47
               

               
Conread position:
               
10-422
               

               
Cow position:
               
chr4:40414441-40414849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 78
               

               
Conread position:
               
10-426
               

               
Cow position:
               
chr4:23509777-23509366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
131, 57
               

               
Conread position:
               
10-442
               

               
Cow position:
               
chr4:32259653-32260087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 28
               

               
Conread position:
               
11-226
               

               
Cow position:
               
chr4:48381575-48381350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
19, 163
               

               
Conread position:
               
11-242
               

               
Cow position:
               
chr4:18952163-18951926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
11-380
               

               
Cow position:
               
chr4:64191995-64192361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 148
               

               
Conread position:
               
11-414
               

               
Cow position:
               
chr4:29805184-29805569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
19, 169
               

               
Conread position:
               
11-426
               

               
Cow position:
               
chr4:53208468-53208079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 59
               

               
Conread position:
               
11-455
               

               
Cow position:
               
chr4:66172610-66173053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 58
               

               
Conread position:
               
12-442
               

               
Cow position:
               
chr4:24197604-24198035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
74, 9
               

               
Conread position:
               
13-167
               

               
Cow position:
               
chr4:68777123-68776964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
13-173
               

               
Cow position:
               
chr4:36070885-36070725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
17, 60
               

               
Conread position:
               
13-426
               

               
Cow position:
               
chr4:4320810-4321228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 57
               

               
Conread position:
               
14-208
               

               
Cow position:
               
chr4:54880892-54881087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
16, 58
               

               
Conread position:
               
15-226
               

               
Cow position:
               
chr4:34653694-34653900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
15, 83
               

               
Conread position:
               
15-423
               

               
Cow position:
               
chr4:68764700-68764298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
17, 139
               

               
Conread position:
               
15-442
               

               
Cow position:
               
chr4:19435430-19435020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 44
               

               
Conread position:
               
17-227
               

               
Cow position:
               
chr4:60506455-60506244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
62, 17
               

               
Conread position:
               
20-216
               

               
Cow position:
               
chr4:54478738-54478939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
10, 140
               

               
Conread position:
               
20-423
               

               
Cow position:
               
chr4:46550565-46550165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 17
               

               
Conread position:
               
21-426
               

               
Cow position:
               
chr4:22236307-22236696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
57, 20
               

               
Conread position:
               
22-194
               

               
Cow position:
               
chr4:19123044-19122874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
26-457
               

               
Cow position:
               
chr4:28836706-28836270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
52, 96
               

               
Conread position:
               
27-224
               

               
Cow position:
               
chr4:34983336-34983525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
183, 44
               

               
Conread position:
               
27-426
               

               
Cow position:
               
chr4:45775163-45775564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 197
               

               
Conread position:
               
27-442
               

               
Cow position:
               
chr4:19097458-19097051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 144
               

               
Conread position:
               
28-190
               

               
Cow position:
               
chr4:53380857-53380695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
60, 153
               

               
Conread position:
               
28-195
               

               
Cow position:
               
chr4:27511714-27511545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
50, 91
               

               
Conread position:
               
28-208
               

               
Cow position:
               
chr4:53819518-53819698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
81, 89
               

               
Conread position:
               
28-215
               

               
Cow position:
               
chr4:3268204-3268383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
179, 57
               

               
Conread position:
               
28-216
               

               
Cow position:
               
chr4:19539065-19539258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
28-423
               

               
Cow position:
               
chr4:15905272-15904879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 97
               

               
Conread position:
               
28-423
               

               
Cow position:
               
chr4:31004246-31004624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
304, 38
               

               
Conread position:
               
28-423
               

               
Cow position:
               
chr4:34165820-34166194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
77, 40
               

               
Conread position:
               
28-426
               

               
Cow position:
               
chr4:2894204-2893802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
61, 96
               

               
Conread position:
               
28-426
               

               
Cow position:
               
chr4:10732386-10731996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
303, 43
               

               
Conread position:
               
28-426
               

               
Cow position:
               
chr4:17052419-17052820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 95
               

               
Conread position:
               
28-426
               

               
Cow position:
               
chr4:19265743-19265350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
49, 93
               

               
Conread position:
               
28-426
               

               
Cow position:
               
chr4:42673342-42672949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
50, 78
               

               
Conread position:
               
28-442
               

               
Cow position:
               
chr4:58248569-58248167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
363, 139
               

               
Conread position:
               
28-457
               

               
Cow position:
               
chr4:34383172-34383593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
50, 85
               

               
Conread position:
               
29-442
               

               
Cow position:
               
chr4:46455901-46456289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
54, 17
               

               
Conread position:
               
31-160
               

               
Cow position:
               
chr4:27425872-27425747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
32-221
               

               
Cow position:
               
chr4:26901484-26901301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
175, 33
               

               
Conread position:
               
32-296
               

               
Cow position:
               
chr4:61188704-61188957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
43, 86
               

               
Conread position:
               
32-347
               

               
Cow position:
               
chr4:25537712-25537407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 42
               

               
Conread position:
               
32-388
               

               
Cow position:
               
chr4:27665179-27664830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
46, 89
               

               
Conread position:
               
32-426
               

               
Cow position:
               
chr4:21058218-21058608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
51, 118
               

               
Conread position:
               
32-426
               

               
Cow position:
               
chr4:51903770-51903380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
48, 9
               

               
Conread position:
               
33-216
               

               
Cow position:
               
chr4:47038930-47038746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
74, 88
               

               
Conread position:
               
33-286
               

               
Cow position:
               
chr4:34562542-34562302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
150, 52
               

               
Conread position:
               
33-334
               

               
Cow position:
               
chr4:14500083-14500378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
177, 52
               

               
Conread position:
               
34-175
               

               
Cow position:
               
chr4:19580588-19580734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
53, 78
               

               
Conread position:
               
34-426
               

               
Cow position:
               
chr4:7571570-7571187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
161, 56
               

               
Conread position:
               
34-426
               

               
Cow position:
               
chr4:12464993-12464624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
64, 88
               

               
Conread position:
               
34-426
               

               
Cow position:
               
chr4:68387948-68387569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
349, 37
               

               
Conread position:
               
35-167
               

               
Cow position:
               
chr4:12716738-12716867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
101, 55
               

               
Conread position:
               
35-215
               

               
Cow position:
               
chr4:49800855-49800674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
50, 77
               

               
Conread position:
               
35-426
               

               
Cow position:
               
chr4:3388706-3388322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
45, 104
               

               
Conread position:
               
36-241
               

               
Cow position:
               
chr4:60141366-60141562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
172, 40
               

               
Conread position:
               
37-374
               

               
Cow position:
               
chr4:2099791-2099468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
41, 82
               

               
Conread position:
               
37-415
               

               
Cow position:
               
chr4:6653881-6653521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
52, 70
               

               
Conread position:
               
39-208
               

               
Cow position:
               
chr4:13995543-13995375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
59, 75
               

               
Conread position:
               
40-423
               

               
Cow position:
               
chr4:22344865-22345234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
63, 18
               

               
Conread position:
               
41-185
               

               
Cow position:
               
chr4:479640-479781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
41-203
               

               
Cow position:
               
chr4:54650331-54650492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
136, 44
               

               
Conread position:
               
41-277
               

               
Cow position:
               
chr4:33181701-33181466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
37, 186
               

               
Conread position:
               
41-360
               

               
Cow position:
               
chr4:40918455-40918135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
41, 197
               

               
Conread position:
               
41-426
               

               
Cow position:
               
chr4:23568314-23567914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
42, 174
               

               
Conread position:
               
41-426
               

               
Cow position:
               
chr4:38999578-38999204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
253, 149
               

               
Conread position:
               
42-252
               

               
Cow position:
               
chr4:60442890-60443098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
167, 21
               

               
Conread position:
               
42-426
               

               
Cow position:
               
chr4:45662355-45662722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 103
               

               
Conread position:
               
42-442
               

               
Cow position:
               
chr4:63964839-63965231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
168, 43
               

               
Conread position:
               
43-217
               

               
Cow position:
               
chr4:69305779-69305605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
110, 44
               

               
Conread position:
               
48-334
               

               
Cow position:
               
chr4:45074205-45073939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
51-424
               

               
Cow position:
               
chr4:33096842-33097182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
54-243
               

               
Cow position:
               
chr4:54541498-54541687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
158, 18
               

               
Conread position:
               
62-208
               

               
Cow position:
               
chr4:51920676-51920532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
62-298
               

               
Cow position:
               
chr4:19324108-19323884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
146, 163
               

               
Conread position:
               
62-417
               

               
Cow position:
               
chr4:13941588-13941245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
269, 12
               

               
Conread position:
               
62-425
               

               
Cow position:
               
chr4:65815572-65815913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
28, 60
               

               
Conread position:
               
63-426
               

               
Cow position:
               
chr4:35870337-35869993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
320, 23
               

               
Conread position:
               
63-426
               

               
Cow position:
               
chr4:55395893-55395546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
150, 26
               

               
Conread position:
               
65-236
               

               
Cow position:
               
chr4:61313082-61313254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
143, 0
               

               
Conread position:
               
65-426
               

               
Cow position:
               
chr4:8412993-8413332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
76, 25
               

               
Conread position:
               
66-226
               

               
Cow position:
               
chr4:65131322-65131484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
22, 33
               

               
Conread position:
               
66-294
               

               
Cow position:
               
chr4:19098602-19098380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
125, 162
               

               
Conread position:
               
66-388
               

               
Cow position:
               
chr4:30792098-30791789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
147, 137
               

               
Conread position:
               
66-421
               

               
Cow position:
               
chr4:8947516-8947187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 58
               

               
Conread position:
               
66-421
               

               
Cow position:
               
chr4:58880830-58881184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 37
               

               
Conread position:
               
66-426
               

               
Cow position:
               
chr4:13256207-13255871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
41, 68
               

               
Conread position:
               
66-426
               

               
Cow position:
               
chr4:32726355-32726000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
25, 161
               

               
Conread position:
               
66-426
               

               
Cow position:
               
chr4:36893490-36893131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 161
               

               
Conread position:
               
66-426
               

               
Cow position:
               
chr4:41300868-41301213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
75, 55
               

               
Conread position:
               
66-426
               

               
Cow position:
               
chr4:44782504-44782152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
142, 113
               

               
Conread position:
               
66-426
               

               
Cow position:
               
chr4:45367869-45367511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
264, 144
               

               
Conread position:
               
66-426
               

               
Cow position:
               
chr4:45644190-45644534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
307, 12
               

               
Conread position:
               
66-442
               

               
Cow position:
               
chr4:12903954-12903578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
25, 164
               

               
Conread position:
               
66-442
               

               
Cow position:
               
chr4:15462121-15462513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
91, 247
               

               
Conread position:
               
67-426
               

               
Cow position:
               
chr4:27540735-27540399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
163, 29
               

               
Conread position:
               
68-426
               

               
Cow position:
               
chr4:54191217-54190872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
142, 121
               

               
Conread position:
               
69-175
               

               
Cow position:
               
chr4:48321397-48321501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
107
               

               
Alignm identity:
               
87
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
69-231
               

               
Cow position:
               
chr4:10851324-10851484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
69-388
               

               
Cow position:
               
chr4:9815220-9815527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 34
               

               
Conread position:
               
69-426
               

               
Cow position:
               
chr4:11194312-11193960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
137, 95
               

               
Conread position:
               
70-426
               

               
Cow position:
               
chr4:46591796-46591437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
19, 159
               

               
Conread position:
               
71-299
               

               
Cow position:
               
chr4:44903418-44903194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
26, 93
               

               
Conread position:
               
71-319
               

               
Cow position:
               
chr4:37675739-37675505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
18, 107
               

               
Conread position:
               
71-319
               

               
Cow position:
               
chr4:65265181-65265421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
144, 0
               

               
Conread position:
               
71-321
               

               
Cow position:
               
chr4:17084214-17084453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
16, 36
               

               
Conread position:
               
71-423
               

               
Cow position:
               
chr4:2602355-2602011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
137, 48
               

               
Conread position:
               
71-426
               

               
Cow position:
               
chr4:19321951-19322301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 151
               

               
Conread position:
               
71-426
               

               
Cow position:
               
chr4:49089911-49089572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
139, 73
               

               
Conread position:
               
71-426
               

               
Cow position:
               
chr4:51784309-51783959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 99
               

               
Conread position:
               
71-426
               

               
Cow position:
               
chr4:54455223-54455566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
139, 25
               

               
Conread position:
               
72-223
               

               
Cow position:
               
chr4:58305783-58305933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
136, 34
               

               
Conread position:
               
72-369
               

               
Cow position:
               
chr4:36577503-36577790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
100, 74
               

               
Conread position:
               
72-426
               

               
Cow position:
               
chr4:64040238-64039886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
136, 24
               

               
Conread position:
               
72-445
               

               
Cow position:
               
chr4:53100924-53100562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 11
               

               
Conread position:
               
74-205
               

               
Cow position:
               
chr4:32789883-32790012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
74-243
               

               
Cow position:
               
chr4:36744700-36744532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
109, 90
               

               
Conread position:
               
74-386
               

               
Cow position:
               
chr4:38886990-38887314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
145, 47
               

               
Conread position:
               
74-387
               

               
Cow position:
               
chr4:17774228-17774530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
196, 140
               

               
Conread position:
               
74-388
               

               
Cow position:
               
chr4:48961364-48961659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
74-426
               

               
Cow position:
               
chr4:570914-570577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
33, 43
               

               
Conread position:
               
74-426
               

               
Cow position:
               
chr4:10412491-10412156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
63, 23
               

               
Conread position:
               
74-426
               

               
Cow position:
               
chr4:44838773-44839107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
62, 36
               

               
Conread position:
               
75-356
               

               
Cow position:
               
chr4:48143956-48143679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
135, 15
               

               
Conread position:
               
75-387
               

               
Cow position:
               
chr4:16594203-16593905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
104, 0
               

               
Conread position:
               
75-426
               

               
Cow position:
               
chr4:47348945-47348610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 15
               

               
Conread position:
               
75-426
               

               
Cow position:
               
chr4:63095953-63096297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 149
               

               
Conread position:
               
78-426
               

               
Cow position:
               
chr4:16762608-16762954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
29, 39
               

               
Conread position:
               
78-426
               

               
Cow position:
               
chr4:23570946-23570575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
19, 44
               

               
Conread position:
               
78-426
               

               
Cow position:
               
chr4:33433140-33433481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 24
               

               
Conread position:
               
78-442
               

               
Cow position:
               
chr4:62771805-62772174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
16, 31
               

               
Conread position:
               
78-448
               

               
Cow position:
               
chr4:39128655-39128290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 63
               

               
Conread position:
               
79-378
               

               
Cow position:
               
chr4:25888718-25888999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
251, 47
               

               
Conread position:
               
79-423
               

               
Cow position:
               
chr4:25879507-25879176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
250, 89
               

               
Conread position:
               
79-426
               

               
Cow position:
               
chr4:20157299-20157634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 63
               

               
Conread position:
               
80-304
               

               
Cow position:
               
chr4:34503412-34503197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
22, 157
               

               
Conread position:
               
80-388
               

               
Cow position:
               
chr4:45738359-45738657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
222, 130
               

               
Conread position:
               
80-426
               

               
Cow position:
               
chr4:2141850-2141523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
130, 17
               

               
Conread position:
               
80-426
               

               
Cow position:
               
chr4:37704381-37704043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 29
               

               
Conread position:
               
81-388
               

               
Cow position:
               
chr4:61148730-61148414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
82, 154
               

               
Conread position:
               
81-426
               

               
Cow position:
               
chr4:43865742-43866073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
222, 111
               

               
Conread position:
               
81-430
               

               
Cow position:
               
chr4:19582503-19582840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 88
               

               
Conread position:
               
82-426
               

               
Cow position:
               
chr4:34337157-34337492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
13, 88
               

               
Conread position:
               
83-388
               

               
Cow position:
               
chr4:3850664-3850377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
125, 135
               

               
Conread position:
               
84-426
               

               
Cow position:
               
chr4:961538-961885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
12, 137
               

               
Conread position:
               
85-426
               

               
Cow position:
               
chr4:54938005-54937664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
56, 11
               

               
Conread position:
               
86-296
               

               
Cow position:
               
chr4:49826362-49826166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
11, 57
               

               
Conread position:
               
86-426
               

               
Cow position:
               
chr4:12561151-12560814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
6, 97
               

               
Conread position:
               
86-426
               

               
Cow position:
               
chr4:37935174-37935503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 141
               

               
Conread position:
               
87-226
               

               
Cow position:
               
chr4:56336774-56336636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
122, 75
               

               
Conread position:
               
87-445
               

               
Cow position:
               
chr4:60897174-60897517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
54, 65
               

               
Conread position:
               
88-426
               

               
Cow position:
               
chr4:24001860-24002191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
226, 11
               

               
Conread position:
               
89-387
               

               
Cow position:
               
chr4:25973004-25972719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
236, 54
               

               
Conread position:
               
90-376
               

               
Cow position:
               
chr4:10379217-10378941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
39, 136
               

               
Conread position:
               
90-378
               

               
Cow position:
               
chr4:20327603-20327879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 111
               

               
Conread position:
               
90-421
               

               
Cow position:
               
chr4:21365507-21365188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
223, 31
               

               
Conread position:
               
90-426
               

               
Cow position:
               
chr4:243336-243003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
302, 60
               

               
Conread position:
               
90-426
               

               
Cow position:
               
chr4:56570912-56570582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
118, 136
               

               
Conread position:
               
91-422
               

               
Cow position:
               
chr4:5460757-5461078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 11
               

               
Conread position:
               
95-423
               

               
Cow position:
               
chr4:38952654-38952339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
115, 131
               

               
Conread position:
               
96-276
               

               
Cow position:
               
chr4:36517383-36517553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
112, 100
               

               
Conread position:
               
96-422
               

               
Cow position:
               
chr4:61897435-61897757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 133
               

               
Conread position:
               
96-426
               

               
Cow position:
               
chr4:42921760-42922068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 76
               

               
Conread position:
               
98-426
               

               
Cow position:
               
chr4:12049344-12049021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 79
               

               
Conread position:
               
101-223
               

               
Cow position:
               
chr4:61478700-61478577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
106, 0
               

               
Conread position:
               
104-426
               

               
Cow position:
               
chr4:17111782-17112099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
106, 59
               

               
Conread position:
               
104-426
               

               
Cow position:
               
chr4:33395606-33395912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
106, 125
               

               
Conread position:
               
106-426
               

               
Cow position:
               
chr4:21257034-21257351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
14, 102
               

               
Conread position:
               
106-426
               

               
Cow position:
               
chr4:59008265-59008592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
119, 135
               

               
Conread position:
               
108-426
               

               
Cow position:
               
chr4:20139429-20139742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
46, 35
               

               
Conread position:
               
115-388
               

               
Cow position:
               
chr4:620054-620329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
33, 40
               

               
Conread position:
               
115-443
               

               
Cow position:
               
chr4:16799105-16799434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 121
               

               
Conread position:
               
116-387
               

               
Cow position:
               
chr4:22115684-22115428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
27, 34
               

               
Conread position:
               
117-382
               

               
Cow position:
               
chr4:2885461-2885717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
214, 112
               

               
Conread position:
               
117-426
               

               
Cow position:
               
chr4:23558583-23558264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
108, 93
               

               
Conread position:
               
118-388
               

               
Cow position:
               
chr4:11332175-11331913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
65, 100
               

               
Conread position:
               
119-388
               

               
Cow position:
               
chr4:66111994-66112252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
35, 23
               

               
Conread position:
               
119-426
               

               
Cow position:
               
chr4:21232797-21233093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
160, 95
               

               
Conread position:
               
123-289
               

               
Cow position:
               
chr4:19493628-19493472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
85, 102
               

               
Conread position:
               
126-426
               

               
Cow position:
               
chr4:39231454-39231745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
211, 6
               

               
Conread position:
               
126-442
               

               
Cow position:
               
chr4:33612289-33612603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
251, 88
               

               
Conread position:
               
127-426
               

               
Cow position:
               
chr4:24744337-24744635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 98
               

               
Conread position:
               
127-426
               

               
Cow position:
               
chr4:44973703-44973420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
190, 36
               

               
Conread position:
               
132-444
               

               
Cow position:
               
chr4:14470506-14470812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
245, 48
               

               
Conread position:
               
152-415
               

               
Cow position:
               
chr4:14964820-14964566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
58, 9
               

               
Conread position:
               
153-422
               

               
Cow position:
               
chr4:19497223-19497468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
213, 16
               

               
Conread position:
               
153-487
               

               
Cow position:
               
chr4:17474482-17474156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
172, 60
               

               
Conread position:
               
157-420
               

               
Cow position:
               
chr4:20299314-20299054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
220, 66
               

               
Conread position:
               
161-442
               

               
Cow position:
               
chr4:28399382-28399647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
263, 51
               

               
Conread position:
               
162-426
               

               
Cow position:
               
chr4:17124258-17124511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
127, 49
               

               
Conread position:
               
164-423
               

               
Cow position:
               
chr4:11201852-11201598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
46, 55
               

               
Conread position:
               
164-426
               

               
Cow position:
               
chr4:53209269-53209013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
46, 62
               

               
Conread position:
               
179-359
               

               
Cow position:
               
chr4:47047912-47047743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
31, 45
               

               
Conread position:
               
180-426
               

               
Cow position:
               
chr4:24458087-24458320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
27, 46
               

               
Conread position:
               
183-426
               

               
Cow position:
               
chr4:19438478-19438236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
27, 43
               

               
Conread position:
               
183-426
               

               
Cow position:
               
chr4:33357949-33357709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
202, 30
               

               
Conread position:
               
183-426
               

               
Cow position:
               
chr4:52631951-52632192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
156, 35
               

               
Conread position:
               
190-388
               

               
Cow position:
               
chr4:63365357-63365558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
30, 55
               

               
Conread position:
               
222-426
               

               
Cow position:
               
chr4:33421372-33421584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
21, 31
               

               
Conread position:
               
223-388
               

               
Cow position:
               
chr4:22215671-22215831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
232-423
               

               
Cow position:
               
chr4:19307237-19307046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
77, 170
               

               
Conread position:
               
235-442
               

               
Cow position:
               
chr4:38181652-38181442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
154, 15
               

               
Conread position:
               
237-423
               

               
Cow position:
               
chr4:1237143-1237336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
33, 122
               

               
Conread position:
               
238-426
               

               
Cow position:
               
chr4:8801478-8801285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
60, 98
               

               
Conread position:
               
240-426
               

               
Cow position:
               
chr4:27997653-27997463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
14, 85
               

               
Conread position:
               
241-426
               

               
Cow position:
               
chr4:5984072-5984267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
18, 53
               

               
Conread position:
               
243-426
               

               
Cow position:
               
chr4:46275155-46274971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
91, 27
               

               
Conread position:
               
245-426
               

               
Cow position:
               
chr4:9845882-9845699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
14, 111
               

               
Conread position:
               
245-426
               

               
Cow position:
               
chr4:26746445-26746262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
85, 7
               

               
Conread position:
               
245-426
               

               
Cow position:
               
chr4:34924727-34924915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
85, 43
               

               
Conread position:
               
245-426
               

               
Cow position:
               
chr4:40823152-40823337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
64, 43
               

               
Conread position:
               
246-403
               

               
Cow position:
               
chr4:11496670-11496830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
23, 6
               

               
Conread position:
               
246-419
               

               
Cow position:
               
chr4:25359574-25359393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
247-423
               

               
Cow position:
               
chr4:23555218-23555032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
86, 5
               

               
Conread position:
               
247-426
               

               
Cow position:
               
chr4:22849758-22849932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
88, 55
               

               
Conread position:
               
247-426
               

               
Cow position:
               
chr4:43495864-43495679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
248-388
               

               
Cow position:
               
chr4:50769805-50769943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
127, 0
               

               
Conread position:
               
248-426
               

               
Cow position:
               
chr4:10999746-10999926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
82, 53
               

               
Conread position:
               
249-388
               

               
Cow position:
               
chr4:36929277-36929138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
250-388
               

               
Cow position:
               
chr4:5189049-5189182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
56, 74
               

               
Conread position:
               
250-388
               

               
Cow position:
               
chr4:47290036-47289895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
250-388
               

               
Cow position:
               
chr4:61171864-61171728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
250-420
               

               
Cow position:
               
chr4:3475586-3475415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
139, 69
               

               
Conread position:
               
250-426
               

               
Cow position:
               
chr4:22860754-22860928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
250-426
               

               
Cow position:
               
chr4:23854149-23853982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
133, 51
               

               
Conread position:
               
250-459
               

               
Cow position:
               
chr4:46370774-46370552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
251-381
               

               
Cow position:
               
chr4:31634612-31634736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
251-383
               

               
Cow position:
               
chr4:54478949-54479078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
251-387
               

               
Cow position:
               
chr4:21517047-21517183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
122, 114
               

               
Conread position:
               
251-387
               

               
Cow position:
               
chr4:37470509-37470376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
251-387
               

               
Cow position:
               
chr4:46552363-46552498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
251-388
               

               
Cow position:
               
chr4:45878-45742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
251-388
               

               
Cow position:
               
chr4:32249291-32249431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
251-392
               

               
Cow position:
               
chr4:27291998-27292138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
138, 0
               

               
Conread position:
               
251-411
               

               
Cow position:
               
chr4:46058794-46058958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
135, 111
               

               
Conread position:
               
251-414
               

               
Cow position:
               
chr4:24810482-24810653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
6, 0
               

               
Conread position:
               
251-423
               

               
Cow position:
               
chr4:16602095-16602271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
126, 166
               

               
Conread position:
               
251-426
               

               
Cow position:
               
chr4:11871953-11872134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
134, 20
               

               
Conread position:
               
251-426
               

               
Cow position:
               
chr4:13272100-13271926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
129, 9
               

               
Conread position:
               
251-426
               

               
Cow position:
               
chr4:14159168-14159346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
67, 59
               

               
Conread position:
               
251-426
               

               
Cow position:
               
chr4:18576815-18576998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
12, 89
               

               
Conread position:
               
251-426
               

               
Cow position:
               
chr4:19463453-19463268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
130, 0
               

               
Conread position:
               
251-426
               

               
Cow position:
               
chr4:23600135-23599948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
100, 46
               

               
Conread position:
               
251-426
               

               
Cow position:
               
chr4:23646888-23647065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
80, 56
               

               
Conread position:
               
251-426
               

               
Cow position:
               
chr4:25356349-25356528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
135, 86
               

               
Conread position:
               
251-426
               

               
Cow position:
               
chr4:51083406-51083584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
73, 35
               

               
Conread position:
               
251-426
               

               
Cow position:
               
chr4:51408015-51408185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
251-426
               

               
Cow position:
               
chr4:53763165-53763340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
138, 32
               

               
Conread position:
               
251-426
               

               
Cow position:
               
chr4:56513986-56514161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
114, 37
               

               
Conread position:
               
251-426
               

               
Cow position:
               
chr4:63119279-63119453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
61, 116
               

               
Conread position:
               
251-446
               

               
Cow position:
               
chr4:2422540-2422337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
115, 11
               

               
Conread position:
               
252-359
               

               
Cow position:
               
chr4:34224070-34223969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
108
               

               
Alignm identity:
               
90
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
252-387
               

               
Cow position:
               
chr4:33869615-33869482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
62, 31
               

               
Conread position:
               
252-388
               

               
Cow position:
               
chr4:5999235-5999368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
252-388
               

               
Cow position:
               
chr4:10992241-10992378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
93, 62
               

               
Conread position:
               
252-388
               

               
Cow position:
               
chr4:20842880-20842745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
252-388
               

               
Cow position:
               
chr4:43515683-43515547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
252-389
               

               
Cow position:
               
chr4:36841241-36841104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
32, 135
               

               
Conread position:
               
252-415
               

               
Cow position:
               
chr4:13832653-13832811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
114, 49
               

               
Conread position:
               
252-416
               

               
Cow position:
               
chr4:19584674-19584492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
252-419
               

               
Cow position:
               
chr4:285602-285439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
82, 22
               

               
Conread position:
               
252-420
               

               
Cow position:
               
chr4:36724995-36724826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
131, 0
               

               
Conread position:
               
252-423
               

               
Cow position:
               
chr4:63813354-63813521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
101, 49
               

               
Conread position:
               
252-425
               

               
Cow position:
               
chr4:11901605-11901784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
81, 19
               

               
Conread position:
               
252-426
               

               
Cow position:
               
chr4:1915626-1915800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
124, 20
               

               
Conread position:
               
252-426
               

               
Cow position:
               
chr4:11090742-11090909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
85, 24
               

               
Conread position:
               
252-426
               

               
Cow position:
               
chr4:11671411-11671230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
123, 71
               

               
Conread position:
               
252-426
               

               
Cow position:
               
chr4:22744276-22744099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
125, 33
               

               
Conread position:
               
252-426
               

               
Cow position:
               
chr4:27687881-27687701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
252-426
               

               
Cow position:
               
chr4:43369895-43370072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
252-426
               

               
Cow position:
               
chr4:48137868-48137687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
252-426
               

               
Cow position:
               
chr4:49424783-49424616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
252-426
               

               
Cow position:
               
chr4:52166896-52167068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
151, 105
               

               
Conread position:
               
252-426
               

               
Cow position:
               
chr4:53999552-53999729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
83, 104
               

               
Conread position:
               
252-426
               

               
Cow position:
               
chr4:54501492-54501671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
133, 0
               

               
Conread position:
               
252-426
               

               
Cow position:
               
chr4:54930463-54930638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
84, 114
               

               
Conread position:
               
252-426
               

               
Cow position:
               
chr4:57555928-57555744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
252-426
               

               
Cow position:
               
chr4:65538460-65538630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
78, 131
               

               
Conread position:
               
252-499
               

               
Cow position:
               
chr4:37619928-37620181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
25, 184
               

               
Conread position:
               
253-424
               

               
Cow position:
               
chr4:39009921-39009745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
101, 18
               

               
Conread position:
               
253-426
               

               
Cow position:
               
chr4:61391249-61391426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
139, 16
               

               
Conread position:
               
253-426
               

               
Cow position:
               
chr4:63459255-63459438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
254-387
               

               
Cow position:
               
chr4:45114650-45114784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
254-422
               

               
Cow position:
               
chr4:53545983-53545814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
72, 114
               

               
Conread position:
               
254-425
               

               
Cow position:
               
chr4:19561639-19561473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
122, 108
               

               
Conread position:
               
254-426
               

               
Cow position:
               
chr4:14919950-14919777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
82, 98
               

               
Conread position:
               
254-426
               

               
Cow position:
               
chr4:67392914-67392747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
77, 109
               

               
Conread position:
               
254-430
               

               
Cow position:
               
chr4:35940051-35940237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
76, 182
               

               
Conread position:
               
255-388
               

               
Cow position:
               
chr4:49212760-49212896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
111, 71
               

               
Conread position:
               
255-388
               

               
Cow position:
               
chr4:54111703-54111568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
255-426
               

               
Cow position:
               
chr4:12004179-12004001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
255-426
               

               
Cow position:
               
chr4:44072812-44072992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
132, 0
               

               
Conread position:
               
255-442
               

               
Cow position:
               
chr4:51739755-51739943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
128, 111
               

               
Conread position:
               
256-426
               

               
Cow position:
               
chr4:12259828-12260003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
81, 45
               

               
Conread position:
               
256-426
               

               
Cow position:
               
chr4:36731149-36730968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
257-421
               

               
Cow position:
               
chr4:11021702-11021867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
81, 105
               

               
Conread position:
               
258-386
               

               
Cow position:
               
chr4:19700057-19699929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
258-388
               

               
Cow position:
               
chr4:45574955-45574826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
73, 30
               

               
Conread position:
               
258-426
               

               
Cow position:
               
chr4:67408476-67408316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
125, 28
               

               
Conread position:
               
259-426
               

               
Cow position:
               
chr4:53447718-53447888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
77, 36
               

               
Conread position:
               
259-437
               

               
Cow position:
               
chr4:44902386-44902211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
124, 107
               

               
Conread position:
               
261-388
               

               
Cow position:
               
chr4:23655939-23655820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
261-388
               

               
Cow position:
               
chr4:23911635-23911765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
261-388
               

               
Cow position:
               
chr4:29238088-29238218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
262-443
               

               
Cow position:
               
chr4:5610124-5610314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
115, 0
               

               
Conread position:
               
263-422
               

               
Cow position:
               
chr4:42266806-42266960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
263-426
               

               
Cow position:
               
chr4:16091453-16091622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
63, 29
               

               
Conread position:
               
263-452
               

               
Cow position:
               
chr4:43749862-43750056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
123, 177
               

               
Conread position:
               
265-423
               

               
Cow position:
               
chr4:21064061-21064223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
124, 63
               

               
Conread position:
               
268-388
               

               
Cow position:
               
chr4:68805967-68805852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
121
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
270-442
               

               
Cow position:
               
chr4:63349536-63349711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
66, 113
               

               
Conread position:
               
271-426
               

               
Cow position:
               
chr4:24118969-24119131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
274-426
               

               
Cow position:
               
chr4:49158849-49159005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
73, 88
               

               
Conread position:
               
275-421
               

               
Cow position:
               
chr4:7249635-7249786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
278-426
               

               
Cow position:
               
chr4:41907861-41908014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
111, 0
               

               
Conread position:
               
279-426
               

               
Cow position:
               
chr4:67599807-67599954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
104, 97
               

               
Conread position:
               
283-426
               

               
Cow position:
               
chr4:2536757-2536610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
98, 126
               

               
Conread position:
               
283-426
               

               
Cow position:
               
chr4:64072423-64072576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
284-426
               

               
Cow position:
               
chr4:20502569-20502432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
53, 15
               

               
Conread position:
               
289-426
               

               
Cow position:
               
chr4:56233607-56233465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
292-426
               

               
Cow position:
               
chr4:10472140-10472001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
295-426
               

               
Cow position:
               
chr4:22072756-22072895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
80, 0
               
Show alignments to all cow chromosomes.