Cow genome map
| Conread name: | LyN1-MLN01E110096 |
| Conread position: | 259-392 |
| Cow position: | chr5:51012267-51012136 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 104 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 274-398 |
| Cow position: | chr5:61914825-61914700 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 97 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 110, 0 |
| Conread position: | 275-377 |
| Cow position: | chr5:57062276-57062379 (view UCSC Genome Browser custom track) |
| Alignm length: | 105 |
| Alignm identity: | 87 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 75, 19 |
| Conread position: | 275-406 |
| Cow position: | chr5:49821684-49821552 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 101 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 115, 0 |
| Conread position: | 276-378 |
| Cow position: | chr5:45337168-45337270 (view UCSC Genome Browser custom track) |
| Alignm length: | 103 |
| Alignm identity: | 85 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 278-373 |
| Cow position: | chr5:35513513-35513422 (view UCSC Genome Browser custom track) |
| Alignm length: | 96 |
| Alignm identity: | 83 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 278-389 |
| Cow position: | chr5:52853214-52853105 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 97 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 107, 16 |
| Conread position: | 279-377 |
| Cow position: | chr5:26548895-26548992 (view UCSC Genome Browser custom track) |
| Alignm length: | 99 |
| Alignm identity: | 84 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 279-378 |
| Cow position: | chr5:35246858-35246958 (view UCSC Genome Browser custom track) |
| Alignm length: | 101 |
| Alignm identity: | 86 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 279-394 |
| Cow position: | chr5:59662809-59662924 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 94 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 105, 27 |
| Conread position: | 280-378 |
| Cow position: | chr5:40167983-40167885 (view UCSC Genome Browser custom track) |
| Alignm length: | 99 |
| Alignm identity: | 83 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 280-378 |
| Cow position: | chr5:41757861-41757763 (view UCSC Genome Browser custom track) |
| Alignm length: | 99 |
| Alignm identity: | 84 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 280-378 |
| Cow position: | chr5:43434754-43434852 (view UCSC Genome Browser custom track) |
| Alignm length: | 99 |
| Alignm identity: | 84 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 280-378 |
| Cow position: | chr5:54375064-54374966 (view UCSC Genome Browser custom track) |
| Alignm length: | 99 |
| Alignm identity: | 84 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 280-411 |
| Cow position: | chr5:36757010-36756872 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 110 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 280-437 |
| Cow position: | chr5:61049581-61049427 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 281-406 |
| Cow position: | chr5:24108809-24108937 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 101 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 281-406 |
| Cow position: | chr5:56624267-56624393 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 102 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 120, 0 |
| Conread position: | 282-383 |
| Cow position: | chr5:50101132-50101233 (view UCSC Genome Browser custom track) |
| Alignm length: | 102 |
| Alignm identity: | 88 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 283-392 |
| Cow position: | chr5:18084221-18084330 (view UCSC Genome Browser custom track) |
| Alignm length: | 112 |
| Alignm identity: | 92 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 97, 11 |
| Conread position: | 283-434 |
| Cow position: | chr5:35208507-35208359 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 116 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 285-378 |
| Cow position: | chr5:57526684-57526777 (view UCSC Genome Browser custom track) |
| Alignm length: | 94 |
| Alignm identity: | 82 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 289-406 |
| Cow position: | chr5:26149274-26149158 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 94 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 291-413 |
| Cow position: | chr5:32086786-32086909 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 95 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 294-393 |
| Cow position: | chr5:17253994-17254093 (view UCSC Genome Browser custom track) |
| Alignm length: | 100 |
| Alignm identity: | 84 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 294-417 |
| Cow position: | chr5:50703813-50703936 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 94 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 296-395 |
| Cow position: | chr5:28719313-28719212 (view UCSC Genome Browser custom track) |
| Alignm length: | 103 |
| Alignm identity: | 87 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 84, 39 |
| Conread position: | 297-393 |
| Cow position: | chr5:58487604-58487508 (view UCSC Genome Browser custom track) |
| Alignm length: | 97 |
| Alignm identity: | 85 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 301-378 |
| Cow position: | chr5:7057170-7057247 (view UCSC Genome Browser custom track) |
| Alignm length: | 78 |
| Alignm identity: | 71 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 301-406 |
| Cow position: | chr5:41935428-41935533 (view UCSC Genome Browser custom track) |
| Alignm length: | 106 |
| Alignm identity: | 85 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.