• Home
• Research
• Resources
• Publications
• About
• People
• Events
• Jobs
• News
• Contact

Cow genome map

           
Conread name:
           
LyN1-MLN01F030047
        

               
Conread position:
               
168-412
               

               
Cow position:
               
chr13:50714882-50715139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
56, 237
               

               
Conread position:
               
180-440
               

               
Cow position:
               
chr13:20314877-20314608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
22, 14
               

               
Conread position:
               
190-409
               

               
Cow position:
               
chr13:3153505-3153733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
26, 124
               

               
Conread position:
               
190-435
               

               
Cow position:
               
chr13:47243792-47243546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
108, 16
               

               
Conread position:
               
190-698
               

               
Cow position:
               
chr13:22115432-22115967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
550
               

               
Alignm identity:
               
408
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 71
               

               
Conread position:
               
191-391
               

               
Cow position:
               
chr13:47340084-47340285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
27, 5
               

               
Conread position:
               
195-442
               

               
Cow position:
               
chr13:17958601-17958864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
7, 124
               

               
Conread position:
               
195-710
               

               
Cow position:
               
chr13:34263608-34263107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
532
               

               
Alignm identity:
               
369
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
6, 13
               

               
Conread position:
               
195-713
               

               
Cow position:
               
chr13:18851852-18852349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
526
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 89
               

               
Conread position:
               
196-334
               

               
Cow position:
               
chr13:56432054-56431922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
196-686
               

               
Cow position:
               
chr13:54094593-54095054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
496
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 27
               

               
Conread position:
               
199-478
               

               
Cow position:
               
chr13:25561399-25561651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
6, 0
               

               
Conread position:
               
201-441
               

               
Cow position:
               
chr13:21171803-21171555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
202-410
               

               
Cow position:
               
chr13:30148786-30148579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
15, 45
               

               
Conread position:
               
202-710
               

               
Cow position:
               
chr13:311203-311706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
530
               

               
Alignm identity:
               
368
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 192
               

               
Conread position:
               
203-340
               

               
Cow position:
               
chr13:19182900-19182761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
203-533
               

               
Cow position:
               
chr13:8374987-8374669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
203-686
               

               
Cow position:
               
chr13:23961035-23960556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
509
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 47
               

               
Conread position:
               
204-383
               

               
Cow position:
               
chr13:11823800-11823970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
204-533
               

               
Cow position:
               
chr13:7333238-7332897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
86, 19
               

               
Conread position:
               
204-590
               

               
Cow position:
               
chr13:49508058-49507686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
346, 97
               

               
Conread position:
               
204-654
               

               
Cow position:
               
chr13:2192510-2192922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
175, 56
               

               
Conread position:
               
204-690
               

               
Cow position:
               
chr13:25926561-25927046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
502
               

               
Alignm identity:
               
367
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 198
               

               
Conread position:
               
204-708
               

               
Cow position:
               
chr13:4552600-4553071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
518
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 12
               

               
Conread position:
               
205-380
               

               
Cow position:
               
chr13:14351352-14351538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
205-394
               

               
Cow position:
               
chr13:6113758-6113556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
205-442
               

               
Cow position:
               
chr13:26492516-26492280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
12, 71
               

               
Conread position:
               
205-448
               

               
Cow position:
               
chr13:7046654-7046891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
132, 66
               

               
Conread position:
               
206-339
               

               
Cow position:
               
chr13:6996929-6997061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
206-664
               

               
Cow position:
               
chr13:20839361-20839792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
355, 10
               

               
Conread position:
               
206-711
               

               
Cow position:
               
chr13:972121-971623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
520
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 10
               

               
Conread position:
               
207-388
               

               
Cow position:
               
chr13:26317114-26316922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
85, 16
               

               
Conread position:
               
207-391
               

               
Cow position:
               
chr13:5092618-5092427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
95, 9
               

               
Conread position:
               
207-441
               

               
Cow position:
               
chr13:1462518-1462282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
11, 55
               

               
Conread position:
               
207-530
               

               
Cow position:
               
chr13:21127566-21127244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
6, 41
               

               
Conread position:
               
207-576
               

               
Cow position:
               
chr13:20579694-20580054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 45
               

               
Conread position:
               
207-686
               

               
Cow position:
               
chr13:32535449-32535903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
15, 31
               

               
Conread position:
               
207-718
               

               
Cow position:
               
chr13:34375034-34375536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
525
               

               
Alignm identity:
               
363
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 137
               

               
Conread position:
               
208-371
               

               
Cow position:
               
chr13:10986731-10986554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
208-383
               

               
Cow position:
               
chr13:14543912-14544094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
86, 42
               

               
Conread position:
               
208-390
               

               
Cow position:
               
chr13:369350-369157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
208-412
               

               
Cow position:
               
chr13:19222449-19222662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
92, 195
               

               
Conread position:
               
208-440
               

               
Cow position:
               
chr13:14927030-14927274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
37, 175
               

               
Conread position:
               
208-440
               

               
Cow position:
               
chr13:15069747-15069971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
12, 92
               

               
Conread position:
               
208-440
               

               
Cow position:
               
chr13:57986155-57985924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
131, 89
               

               
Conread position:
               
208-441
               

               
Cow position:
               
chr13:18061941-18062166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
87, 138
               

               
Conread position:
               
208-442
               

               
Cow position:
               
chr13:52934203-52934443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
16, 44
               

               
Conread position:
               
208-489
               

               
Cow position:
               
chr13:14014963-14015241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
87, 44
               

               
Conread position:
               
208-534
               

               
Cow position:
               
chr13:46043951-46044259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
208-536
               

               
Cow position:
               
chr13:27550512-27550842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 195
               

               
Conread position:
               
208-542
               

               
Cow position:
               
chr13:17569321-17568988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
15, 47
               

               
Conread position:
               
208-562
               

               
Cow position:
               
chr13:11201815-11202157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 194
               

               
Conread position:
               
208-639
               

               
Cow position:
               
chr13:23512158-23512558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 17
               

               
Conread position:
               
208-644
               

               
Cow position:
               
chr13:59170421-59170861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 200
               

               
Conread position:
               
208-710
               

               
Cow position:
               
chr13:57002499-57003013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
528
               

               
Alignm identity:
               
367
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 195
               

               
Conread position:
               
208-713
               

               
Cow position:
               
chr13:24753670-24754161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
521
               

               
Alignm identity:
               
383
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
129, 90
               

               
Conread position:
               
208-713
               

               
Cow position:
               
chr13:44201786-44202266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
516
               

               
Alignm identity:
               
360
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 189
               

               
Conread position:
               
208-718
               

               
Cow position:
               
chr13:20378539-20378060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
513
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 15
               

               
Conread position:
               
209-318
               

               
Cow position:
               
chr13:20186656-20186547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
110
               

               
Alignm identity:
               
89
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
209-326
               

               
Cow position:
               
chr13:11451797-11451912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
118
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
209-335
               

               
Cow position:
               
chr13:14782126-14782246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
209-339
               

               
Cow position:
               
chr13:29507388-29507525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
209-340
               

               
Cow position:
               
chr13:23680587-23680721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
93, 14
               

               
Conread position:
               
209-372
               

               
Cow position:
               
chr13:29665794-29665969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
209-373
               

               
Cow position:
               
chr13:20520088-20520264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
209-373
               

               
Cow position:
               
chr13:26377643-26377467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
79, 116
               

               
Conread position:
               
209-373
               

               
Cow position:
               
chr13:34300070-34299910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
141, 87
               

               
Conread position:
               
209-373
               

               
Cow position:
               
chr13:43342345-43342517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
209-381
               

               
Cow position:
               
chr13:17624095-17624279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
209-382
               

               
Cow position:
               
chr13:43576788-43576972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
209-388
               

               
Cow position:
               
chr13:19177945-19178142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
209-389
               

               
Cow position:
               
chr13:52891028-52891198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
209-390
               

               
Cow position:
               
chr13:16476631-16476823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
209-392
               

               
Cow position:
               
chr13:390860-390672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
14, 35
               

               
Conread position:
               
209-394
               

               
Cow position:
               
chr13:22046234-22046038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
8, 61
               

               
Conread position:
               
209-394
               

               
Cow position:
               
chr13:27028127-27027928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
79, 96
               

               
Conread position:
               
209-406
               

               
Cow position:
               
chr13:54627259-54627468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
77, 197
               

               
Conread position:
               
209-408
               

               
Cow position:
               
chr13:18970761-18970962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
104, 79
               

               
Conread position:
               
209-409
               

               
Cow position:
               
chr13:13797039-13796826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
81, 204
               

               
Conread position:
               
209-415
               

               
Cow position:
               
chr13:50623033-50622823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
76, 54
               

               
Conread position:
               
209-416
               

               
Cow position:
               
chr13:22122486-22122703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
14, 206
               

               
Conread position:
               
209-416
               

               
Cow position:
               
chr13:24160227-24160443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
86, 205
               

               
Conread position:
               
209-419
               

               
Cow position:
               
chr13:1791652-1791433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
86, 194
               

               
Conread position:
               
209-419
               

               
Cow position:
               
chr13:28439192-28439403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
10, 43
               

               
Conread position:
               
209-421
               

               
Cow position:
               
chr13:2393166-2393381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
22, 89
               

               
Conread position:
               
209-436
               

               
Cow position:
               
chr13:6486476-6486241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
12, 177
               

               
Conread position:
               
209-436
               

               
Cow position:
               
chr13:45593701-45593929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
128, 81
               

               
Conread position:
               
209-437
               

               
Cow position:
               
chr13:9707969-9707738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
46, 90
               

               
Conread position:
               
209-438
               

               
Cow position:
               
chr13:20519847-20520073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
13, 78
               

               
Conread position:
               
209-439
               

               
Cow position:
               
chr13:15993160-15993399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
10, 194
               

               
Conread position:
               
209-440
               

               
Cow position:
               
chr13:11434798-11434561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
9, 42
               

               
Conread position:
               
209-440
               

               
Cow position:
               
chr13:26726832-26726592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
75, 195
               

               
Conread position:
               
209-441
               

               
Cow position:
               
chr13:59461025-59461253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
32, 14
               

               
Conread position:
               
209-442
               

               
Cow position:
               
chr13:47676159-47675919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
93, 192
               

               
Conread position:
               
209-443
               

               
Cow position:
               
chr13:21981192-21980959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
126, 89
               

               
Conread position:
               
209-447
               

               
Cow position:
               
chr13:14795983-14796229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
89, 174
               

               
Conread position:
               
209-465
               

               
Cow position:
               
chr13:33601451-33601195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
72, 187
               

               
Conread position:
               
209-473
               

               
Cow position:
               
chr13:34873362-34873633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
22, 195
               

               
Conread position:
               
209-476
               

               
Cow position:
               
chr13:19427412-19427686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
96, 58
               

               
Conread position:
               
209-477
               

               
Cow position:
               
chr13:21866854-21866581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
75, 43
               

               
Conread position:
               
209-504
               

               
Cow position:
               
chr13:21170305-21170604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
15, 90
               

               
Conread position:
               
209-507
               

               
Cow position:
               
chr13:13471642-13471332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
83, 196
               

               
Conread position:
               
209-518
               

               
Cow position:
               
chr13:14940575-14940892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
83, 246
               

               
Conread position:
               
209-532
               

               
Cow position:
               
chr13:7265328-7265022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
320, 74
               

               
Conread position:
               
209-532
               

               
Cow position:
               
chr13:20261557-20261224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
9, 254
               

               
Conread position:
               
209-532
               

               
Cow position:
               
chr13:20358108-20357792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
76, 120
               

               
Conread position:
               
209-532
               

               
Cow position:
               
chr13:28500289-28499966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
94, 249
               

               
Conread position:
               
209-536
               

               
Cow position:
               
chr13:21269803-21269477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 190
               

               
Conread position:
               
209-537
               

               
Cow position:
               
chr13:10220735-10221052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 194
               

               
Conread position:
               
209-540
               

               
Cow position:
               
chr13:620470-620151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 147
               

               
Conread position:
               
209-547
               

               
Cow position:
               
chr13:54128821-54128477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 62
               

               
Conread position:
               
209-575
               

               
Cow position:
               
chr13:58524720-58525082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
76, 118
               

               
Conread position:
               
209-580
               

               
Cow position:
               
chr13:26698719-26698344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
125, 91
               

               
Conread position:
               
209-618
               

               
Cow position:
               
chr13:49503761-49503350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
15, 205
               

               
Conread position:
               
209-618
               

               
Cow position:
               
chr13:52055815-52055418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 64
               

               
Conread position:
               
209-648
               

               
Cow position:
               
chr13:13338636-13339072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 88
               

               
Conread position:
               
209-662
               

               
Cow position:
               
chr13:10845394-10845815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 91
               

               
Conread position:
               
209-667
               

               
Cow position:
               
chr13:23667037-23667489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 12
               

               
Conread position:
               
209-667
               

               
Cow position:
               
chr13:34261013-34261459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 92
               

               
Conread position:
               
209-680
               

               
Cow position:
               
chr13:45023445-45022964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
498
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 187
               

               
Conread position:
               
209-685
               

               
Cow position:
               
chr13:19364022-19364493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
132, 43
               

               
Conread position:
               
209-686
               

               
Cow position:
               
chr13:37985970-37985501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
496
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 194
               

               
Conread position:
               
209-688
               

               
Cow position:
               
chr13:13260769-13261260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
506
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
52, 185
               

               
Conread position:
               
209-689
               

               
Cow position:
               
chr13:9664860-9665328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
299, 66
               

               
Conread position:
               
209-689
               

               
Cow position:
               
chr13:43595329-43594863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
367
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 46
               

               
Conread position:
               
209-698
               

               
Cow position:
               
chr13:60509348-60508854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
513
               

               
Alignm identity:
               
379
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 193
               

               
Conread position:
               
209-701
               

               
Cow position:
               
chr13:20271453-20270953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
520
               

               
Alignm identity:
               
376
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 36
               

               
Conread position:
               
209-706
               

               
Cow position:
               
chr13:16247422-16247922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
521
               

               
Alignm identity:
               
359
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 253
               

               
Conread position:
               
209-709
               

               
Cow position:
               
chr13:47007935-47007466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
509
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 88
               

               
Conread position:
               
209-713
               

               
Cow position:
               
chr13:13088810-13089300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
519
               

               
Alignm identity:
               
361
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 89
               

               
Conread position:
               
209-713
               

               
Cow position:
               
chr13:15868887-15869394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
529
               

               
Alignm identity:
               
377
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 241
               

               
Conread position:
               
209-718
               

               
Cow position:
               
chr13:9142053-9142563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
535
               

               
Alignm identity:
               
373
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 13
               

               
Conread position:
               
209-718
               

               
Cow position:
               
chr13:21235890-21235408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
524
               

               
Alignm identity:
               
361
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 122
               

               
Conread position:
               
209-718
               

               
Cow position:
               
chr13:21275634-21276136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
526
               

               
Alignm identity:
               
392
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 56
               

               
Conread position:
               
209-722
               

               
Cow position:
               
chr13:12989640-12990131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
520
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
81, 62
               

               
Conread position:
               
209-791
               

               
Cow position:
               
chr13:9587804-9587230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
593
               

               
Alignm identity:
               
421
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 32
               

               
Conread position:
               
209-792
               

               
Cow position:
               
chr13:54286942-54286388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
597
               

               
Alignm identity:
               
390
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
89, 32
               

               
Conread position:
               
210-316
               

               
Cow position:
               
chr13:14383855-14383965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
111
               

               
Alignm identity:
               
91
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
210-330
               

               
Cow position:
               
chr13:20654083-20653957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
210-333
               

               
Cow position:
               
chr13:7097365-7097488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
210-333
               

               
Cow position:
               
chr13:25082881-25083000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
210-334
               

               
Cow position:
               
chr13:9702235-9702363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
210-334
               

               
Cow position:
               
chr13:43102760-43102888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
210-336
               

               
Cow position:
               
chr13:27871550-27871675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
52, 62
               

               
Conread position:
               
210-338
               

               
Cow position:
               
chr13:24759567-24759424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
210-340
               

               
Cow position:
               
chr13:21886902-21886768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
210-365
               

               
Cow position:
               
chr13:9108893-9108734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
131, 87
               

               
Conread position:
               
210-366
               

               
Cow position:
               
chr13:53847340-53847179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
124, 80
               

               
Conread position:
               
210-370
               

               
Cow position:
               
chr13:5659986-5659821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
124, 80
               

               
Conread position:
               
210-370
               

               
Cow position:
               
chr13:9551142-9551307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
121, 80
               

               
Conread position:
               
210-375
               

               
Cow position:
               
chr13:1347389-1347215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
210-377
               

               
Cow position:
               
chr13:43811708-43811893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
210-378
               

               
Cow position:
               
chr13:22729627-22729449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
80, 173
               

               
Conread position:
               
210-386
               

               
Cow position:
               
chr13:8367497-8367677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
125, 156
               

               
Conread position:
               
210-386
               

               
Cow position:
               
chr13:33518180-33517994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
210-387
               

               
Cow position:
               
chr13:28605616-28605427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
210-387
               

               
Cow position:
               
chr13:46350128-46349941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
80, 66
               

               
Conread position:
               
210-388
               

               
Cow position:
               
chr13:5175379-5175561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
129, 13
               

               
Conread position:
               
210-389
               

               
Cow position:
               
chr13:18997176-18997353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
88, 115
               

               
Conread position:
               
210-390
               

               
Cow position:
               
chr13:20537394-20537585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
85, 175
               

               
Conread position:
               
210-390
               

               
Cow position:
               
chr13:20789740-20789544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
210-391
               

               
Cow position:
               
chr13:15060432-15060607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
210-392
               

               
Cow position:
               
chr13:20578653-20578845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
74, 185
               

               
Conread position:
               
210-393
               

               
Cow position:
               
chr13:62252066-62251874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
84, 42
               

               
Conread position:
               
210-394
               

               
Cow position:
               
chr13:12769144-12768949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
210-394
               

               
Cow position:
               
chr13:21024762-21024954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
87, 175
               

               
Conread position:
               
210-395
               

               
Cow position:
               
chr13:17135436-17135242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
85, 40
               

               
Conread position:
               
210-398
               

               
Cow position:
               
chr13:10408732-10408932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
210-398
               

               
Cow position:
               
chr13:20155954-20156152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
74, 192
               

               
Conread position:
               
210-405
               

               
Cow position:
               
chr13:7716911-7716707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
85, 194
               

               
Conread position:
               
210-406
               

               
Cow position:
               
chr13:9124707-9124906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 80
               

               
Conread position:
               
210-413
               

               
Cow position:
               
chr13:17845263-17845475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
85, 193
               

               
Conread position:
               
210-415
               

               
Cow position:
               
chr13:54236589-54236792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
83, 42
               

               
Conread position:
               
210-423
               

               
Cow position:
               
chr13:10096761-10096534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
99, 198
               

               
Conread position:
               
210-423
               

               
Cow position:
               
chr13:40937337-40937120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
99, 39
               

               
Conread position:
               
210-430
               

               
Cow position:
               
chr13:17813250-17813475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
74, 62
               

               
Conread position:
               
210-432
               

               
Cow position:
               
chr13:773135-773362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
84, 90
               

               
Conread position:
               
210-435
               

               
Cow position:
               
chr13:4416887-4417120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
85, 111
               

               
Conread position:
               
210-435
               

               
Cow position:
               
chr13:48222770-48222539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
89, 53
               

               
Conread position:
               
210-436
               

               
Cow position:
               
chr13:38109953-38109716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
88, 192
               

               
Conread position:
               
210-438
               

               
Cow position:
               
chr13:33974525-33974745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
210-439
               

               
Cow position:
               
chr13:61345080-61344844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
82, 39
               

               
Conread position:
               
210-440
               

               
Cow position:
               
chr13:8779035-8779256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
132, 0
               

               
Conread position:
               
210-441
               

               
Cow position:
               
chr13:9161714-9161937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
89, 15
               

               
Conread position:
               
210-441
               

               
Cow position:
               
chr13:24814631-24814868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
84, 186
               

               
Conread position:
               
210-441
               

               
Cow position:
               
chr13:55080916-55081157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
21, 112
               

               
Conread position:
               
210-442
               

               
Cow position:
               
chr13:6183652-6183404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
88, 37
               

               
Conread position:
               
210-442
               

               
Cow position:
               
chr13:45429087-45428844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
85, 203
               

               
Conread position:
               
210-446
               

               
Cow position:
               
chr13:58332821-58333066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
85, 146
               

               
Conread position:
               
210-450
               

               
Cow position:
               
chr13:15996815-15997058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 42
               

               
Conread position:
               
210-455
               

               
Cow position:
               
chr13:6889518-6889771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
72, 27
               

               
Conread position:
               
210-466
               

               
Cow position:
               
chr13:41157176-41157440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
76, 192
               

               
Conread position:
               
210-469
               

               
Cow position:
               
chr13:57436622-57436351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
37, 196
               

               
Conread position:
               
210-472
               

               
Cow position:
               
chr13:17433384-17433116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
84, 11
               

               
Conread position:
               
210-472
               

               
Cow position:
               
chr13:52459694-52459440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
131, 39
               

               
Conread position:
               
210-475
               

               
Cow position:
               
chr13:585095-584827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 177
               

               
Conread position:
               
210-476
               

               
Cow position:
               
chr13:26721014-26720738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
36, 197
               

               
Conread position:
               
210-478
               

               
Cow position:
               
chr13:17823171-17822903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 189
               

               
Conread position:
               
210-505
               

               
Cow position:
               
chr13:4974886-4974587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
85, 190
               

               
Conread position:
               
210-524
               

               
Cow position:
               
chr13:16203444-16203763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
85, 197
               

               
Conread position:
               
210-527
               

               
Cow position:
               
chr13:13554549-13554226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
80, 35
               

               
Conread position:
               
210-531
               

               
Cow position:
               
chr13:2822646-2822962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
84, 62
               

               
Conread position:
               
210-531
               

               
Cow position:
               
chr13:56677819-56678115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
210-533
               

               
Cow position:
               
chr13:14575994-14576309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 88
               

               
Conread position:
               
210-535
               

               
Cow position:
               
chr13:20330992-20331325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
24, 40
               

               
Conread position:
               
210-536
               

               
Cow position:
               
chr13:1363465-1363797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
36, 201
               

               
Conread position:
               
210-536
               

               
Cow position:
               
chr13:13238361-13238680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
36, 66
               

               
Conread position:
               
210-536
               

               
Cow position:
               
chr13:13954617-13954285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 192
               

               
Conread position:
               
210-536
               

               
Cow position:
               
chr13:14967436-14967112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
80, 165
               

               
Conread position:
               
210-536
               

               
Cow position:
               
chr13:17450871-17451197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
65, 193
               

               
Conread position:
               
210-536
               

               
Cow position:
               
chr13:18973671-18973336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
34, 197
               

               
Conread position:
               
210-538
               

               
Cow position:
               
chr13:7998136-7998456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
122, 19
               

               
Conread position:
               
210-540
               

               
Cow position:
               
chr13:4158438-4158774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 42
               

               
Conread position:
               
210-540
               

               
Cow position:
               
chr13:17498000-17498328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 39
               

               
Conread position:
               
210-541
               

               
Cow position:
               
chr13:25579411-25579078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 27
               

               
Conread position:
               
210-559
               

               
Cow position:
               
chr13:14879176-14878830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
99, 193
               

               
Conread position:
               
210-562
               

               
Cow position:
               
chr13:28552365-28552721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 109
               

               
Conread position:
               
210-583
               

               
Cow position:
               
chr13:49823802-49824179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 173
               

               
Conread position:
               
210-586
               

               
Cow position:
               
chr13:607484-607107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
74, 197
               

               
Conread position:
               
210-586
               

               
Cow position:
               
chr13:9846685-9846298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 31
               

               
Conread position:
               
210-586
               

               
Cow position:
               
chr13:28689257-28689625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
109, 121
               

               
Conread position:
               
210-597
               

               
Cow position:
               
chr13:6930702-6931071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
50, 39
               

               
Conread position:
               
210-609
               

               
Cow position:
               
chr13:29831648-29831265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 190
               

               
Conread position:
               
210-629
               

               
Cow position:
               
chr13:7032064-7032480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
36, 193
               

               
Conread position:
               
210-652
               

               
Cow position:
               
chr13:60340582-60341026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 115
               

               
Conread position:
               
210-655
               

               
Cow position:
               
chr13:8245537-8245117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
10, 75
               

               
Conread position:
               
210-661
               

               
Cow position:
               
chr13:40490996-40491454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 62
               

               
Conread position:
               
210-663
               

               
Cow position:
               
chr13:31581959-31581523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
98, 43
               

               
Conread position:
               
210-667
               

               
Cow position:
               
chr13:10925144-10924679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
371
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 192
               

               
Conread position:
               
210-667
               

               
Cow position:
               
chr13:19033334-19033774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 103
               

               
Conread position:
               
210-676
               

               
Cow position:
               
chr13:19610785-19610339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
124, 171
               

               
Conread position:
               
210-686
               

               
Cow position:
               
chr13:20821057-20820591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
496
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
112, 13
               

               
Conread position:
               
210-688
               

               
Cow position:
               
chr13:8194875-8195333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
94, 191
               

               
Conread position:
               
210-689
               

               
Cow position:
               
chr13:15945273-15945753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
299, 13
               

               
Conread position:
               
210-698
               

               
Cow position:
               
chr13:16292316-16292808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
507
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
85, 235
               

               
Conread position:
               
210-698
               

               
Cow position:
               
chr13:22085953-22085495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
458, 37
               

               
Conread position:
               
210-702
               

               
Cow position:
               
chr13:18166511-18166996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
505
               

               
Alignm identity:
               
377
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 189
               

               
Conread position:
               
210-709
               

               
Cow position:
               
chr13:8203084-8202612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
514
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
85, 13
               

               
Conread position:
               
210-710
               

               
Cow position:
               
chr13:17159103-17158590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
524
               

               
Alignm identity:
               
375
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 235
               

               
Conread position:
               
210-710
               

               
Cow position:
               
chr13:45725651-45726153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
531
               

               
Alignm identity:
               
363
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
38, 179
               

               
Conread position:
               
210-712
               

               
Cow position:
               
chr13:17855146-17855650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
521
               

               
Alignm identity:
               
375
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 194
               

               
Conread position:
               
210-713
               

               
Cow position:
               
chr13:2773894-2774395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
527
               

               
Alignm identity:
               
379
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 254
               

               
Conread position:
               
210-713
               

               
Cow position:
               
chr13:6616984-6616471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
523
               

               
Alignm identity:
               
383
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 251
               

               
Conread position:
               
210-713
               

               
Cow position:
               
chr13:12876197-12875708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
516
               

               
Alignm identity:
               
390
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 195
               

               
Conread position:
               
210-713
               

               
Cow position:
               
chr13:21707983-21708458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
515
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 157
               

               
Conread position:
               
210-713
               

               
Cow position:
               
chr13:34035148-34035645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
518
               

               
Alignm identity:
               
368
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 171
               

               
Conread position:
               
210-713
               

               
Cow position:
               
chr13:51940525-51941006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
514
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 42
               

               
Conread position:
               
210-713
               

               
Cow position:
               
chr13:56686222-56686708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
515
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 34
               

               
Conread position:
               
210-713
               

               
Cow position:
               
chr13:58043400-58043905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
523
               

               
Alignm identity:
               
370
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 199
               

               
Conread position:
               
210-718
               

               
Cow position:
               
chr13:1155926-1155427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
525
               

               
Alignm identity:
               
372
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 31
               

               
Conread position:
               
210-718
               

               
Cow position:
               
chr13:15162857-15162388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
521
               

               
Alignm identity:
               
365
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 177
               

               
Conread position:
               
210-718
               

               
Cow position:
               
chr13:20880046-20879556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
522
               

               
Alignm identity:
               
386
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 191
               

               
Conread position:
               
210-736
               

               
Cow position:
               
chr13:19883255-19882740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
538
               

               
Alignm identity:
               
368
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
129, 93
               

               
Conread position:
               
210-746
               

               
Cow position:
               
chr13:12449202-12448681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
556
               

               
Alignm identity:
               
398
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 37
               

               
Conread position:
               
211-334
               

               
Cow position:
               
chr13:9327312-9327191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
211-335
               

               
Cow position:
               
chr13:27146599-27146728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
211-338
               

               
Cow position:
               
chr13:242412-242542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
83, 14
               

               
Conread position:
               
211-340
               

               
Cow position:
               
chr13:20854680-20854547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
83, 110
               

               
Conread position:
               
211-369
               

               
Cow position:
               
chr13:51198589-51198757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
85, 153
               

               
Conread position:
               
211-374
               

               
Cow position:
               
chr13:6951361-6951529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
123, 14
               

               
Conread position:
               
211-379
               

               
Cow position:
               
chr13:37946606-37946434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
126, 79
               

               
Conread position:
               
211-383
               

               
Cow position:
               
chr13:21426039-21425871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
211-391
               

               
Cow position:
               
chr13:24796663-24796845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
124, 38
               

               
Conread position:
               
211-394
               

               
Cow position:
               
chr13:8637474-8637668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
211-394
               

               
Cow position:
               
chr13:11565618-11565807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
9, 88
               

               
Conread position:
               
211-394
               

               
Cow position:
               
chr13:16163368-16163552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
123, 41
               

               
Conread position:
               
211-399
               

               
Cow position:
               
chr13:28695638-28695835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
81, 39
               

               
Conread position:
               
211-402
               

               
Cow position:
               
chr13:17837157-17836963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
121, 77
               

               
Conread position:
               
211-424
               

               
Cow position:
               
chr13:10522719-10522932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
126, 87
               

               
Conread position:
               
211-424
               

               
Cow position:
               
chr13:30315280-30315505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
81, 195
               

               
Conread position:
               
211-424
               

               
Cow position:
               
chr13:33868195-33868417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
83, 192
               

               
Conread position:
               
211-425
               

               
Cow position:
               
chr13:53850602-53850824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
90, 11
               

               
Conread position:
               
211-431
               

               
Cow position:
               
chr13:16096356-16096583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
130, 32
               

               
Conread position:
               
211-431
               

               
Cow position:
               
chr13:50768371-50768601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
65, 180
               

               
Conread position:
               
211-433
               

               
Cow position:
               
chr13:28536541-28536315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
81, 180
               

               
Conread position:
               
211-435
               

               
Cow position:
               
chr13:12923654-12923883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
87, 61
               

               
Conread position:
               
211-438
               

               
Cow position:
               
chr13:40541329-40541093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 192
               

               
Conread position:
               
211-440
               

               
Cow position:
               
chr13:50646848-50646621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
126, 12
               

               
Conread position:
               
211-458
               

               
Cow position:
               
chr13:45130295-45130544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
12, 31
               

               
Conread position:
               
211-467
               

               
Cow position:
               
chr13:12673508-12673257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
181, 0
               

               
Conread position:
               
211-476
               

               
Cow position:
               
chr13:18197827-18197561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
122, 14
               

               
Conread position:
               
211-476
               

               
Cow position:
               
chr13:46237006-46236747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
73, 165
               

               
Conread position:
               
211-477
               

               
Cow position:
               
chr13:21012744-21012989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
12, 136
               

               
Conread position:
               
211-478
               

               
Cow position:
               
chr13:11231517-11231260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
55, 188
               

               
Conread position:
               
211-488
               

               
Cow position:
               
chr13:50601926-50601647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
81, 192
               

               
Conread position:
               
211-495
               

               
Cow position:
               
chr13:33962979-33962705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
113, 42
               

               
Conread position:
               
211-499
               

               
Cow position:
               
chr13:55161989-55162280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
12, 40
               

               
Conread position:
               
211-500
               

               
Cow position:
               
chr13:8425232-8425524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
84, 192
               

               
Conread position:
               
211-500
               

               
Cow position:
               
chr13:42672650-42672352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 201
               

               
Conread position:
               
211-526
               

               
Cow position:
               
chr13:22227953-22227625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
71, 200
               

               
Conread position:
               
211-530
               

               
Cow position:
               
chr13:49795818-49796118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 129
               

               
Conread position:
               
211-533
               

               
Cow position:
               
chr13:15194941-15194629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
220, 87
               

               
Conread position:
               
211-534
               

               
Cow position:
               
chr13:21313897-21313572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
72, 191
               

               
Conread position:
               
211-535
               

               
Cow position:
               
chr13:49457482-49457776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
299, 88
               

               
Conread position:
               
211-536
               

               
Cow position:
               
chr13:6848704-6849033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 192
               

               
Conread position:
               
211-541
               

               
Cow position:
               
chr13:19240219-19240546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 70
               

               
Conread position:
               
211-559
               

               
Cow position:
               
chr13:5911111-5910774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 41
               

               
Conread position:
               
211-570
               

               
Cow position:
               
chr13:9800301-9800646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 57
               

               
Conread position:
               
211-661
               

               
Cow position:
               
chr13:17745040-17745460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 10
               

               
Conread position:
               
211-663
               

               
Cow position:
               
chr13:7059238-7059698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 192
               

               
Conread position:
               
211-667
               

               
Cow position:
               
chr13:47964392-47963974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
79, 25
               

               
Conread position:
               
211-686
               

               
Cow position:
               
chr13:35659535-35660003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 12
               

               
Conread position:
               
211-686
               

               
Cow position:
               
chr13:40722915-40722460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 89
               

               
Conread position:
               
211-689
               

               
Cow position:
               
chr13:3315906-3315420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
508
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 42
               

               
Conread position:
               
211-708
               

               
Cow position:
               
chr13:19024072-19023567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
519
               

               
Alignm identity:
               
359
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 192
               

               
Conread position:
               
211-713
               

               
Cow position:
               
chr13:32017736-32017246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
513
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
171, 86
               

               
Conread position:
               
211-713
               

               
Cow position:
               
chr13:44278126-44278631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
521
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 29
               

               
Conread position:
               
211-713
               

               
Cow position:
               
chr13:61046985-61047483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
526
               

               
Alignm identity:
               
375
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 201
               

               
Conread position:
               
211-718
               

               
Cow position:
               
chr13:25817309-25817794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
519
               

               
Alignm identity:
               
363
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 86
               

               
Conread position:
               
211-718
               

               
Cow position:
               
chr13:35526414-35525933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
521
               

               
Alignm identity:
               
360
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 39
               

               
Conread position:
               
211-718
               

               
Cow position:
               
chr13:38329399-38329914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
529
               

               
Alignm identity:
               
365
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 12
               

               
Conread position:
               
211-724
               

               
Cow position:
               
chr13:13320577-13321068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
529
               

               
Alignm identity:
               
365
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 191
               

               
Conread position:
               
211-791
               

               
Cow position:
               
chr13:45352806-45353411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
616
               

               
Alignm identity:
               
460
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 198
               

               
Conread position:
               
211-797
               

               
Cow position:
               
chr13:19393076-19393640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
597
               

               
Alignm identity:
               
427
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 41
               

               
Conread position:
               
211-797
               

               
Cow position:
               
chr13:42113795-42114397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
619
               

               
Alignm identity:
               
440
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 192
               

               
Conread position:
               
212-335
               

               
Cow position:
               
chr13:3388011-3387884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
212-340
               

               
Cow position:
               
chr13:52929212-52929344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
212-380
               

               
Cow position:
               
chr13:28081499-28081678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
83, 9
               

               
Conread position:
               
212-390
               

               
Cow position:
               
chr13:37555088-37554908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
125, 9
               

               
Conread position:
               
212-396
               

               
Cow position:
               
chr13:24107765-24107576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
122, 85
               

               
Conread position:
               
212-408
               

               
Cow position:
               
chr13:37030130-37030324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
81, 112
               

               
Conread position:
               
212-411
               

               
Cow position:
               
chr13:48370519-48370312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
73, 40
               

               
Conread position:
               
212-412
               

               
Cow position:
               
chr13:23975384-23975179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
82, 13
               

               
Conread position:
               
212-417
               

               
Cow position:
               
chr13:43788067-43787846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
77, 198
               

               
Conread position:
               
212-417
               

               
Cow position:
               
chr13:43839906-43839685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
75, 198
               

               
Conread position:
               
212-434
               

               
Cow position:
               
chr13:10727140-10727372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
72, 192
               

               
Conread position:
               
212-436
               

               
Cow position:
               
chr13:51077937-51078173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
212-437
               

               
Cow position:
               
chr13:37614415-37614180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
77, 9
               

               
Conread position:
               
212-439
               

               
Cow position:
               
chr13:50583037-50582807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
125, 86
               

               
Conread position:
               
212-440
               

               
Cow position:
               
chr13:44549167-44549404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
75, 191
               

               
Conread position:
               
212-441
               

               
Cow position:
               
chr13:55765395-55765163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 76
               

               
Conread position:
               
212-442
               

               
Cow position:
               
chr13:37775425-37775191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
83, 60
               

               
Conread position:
               
212-457
               

               
Cow position:
               
chr13:26960017-26959774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
129, 189
               

               
Conread position:
               
212-478
               

               
Cow position:
               
chr13:11103427-11103143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
84, 209
               

               
Conread position:
               
212-478
               

               
Cow position:
               
chr13:16020640-16020900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
125, 76
               

               
Conread position:
               
212-515
               

               
Cow position:
               
chr13:27180818-27181115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
82, 191
               

               
Conread position:
               
212-521
               

               
Cow position:
               
chr13:52477862-52477555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
125, 9
               

               
Conread position:
               
212-532
               

               
Cow position:
               
chr13:16038502-16038191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 96
               

               
Conread position:
               
212-532
               

               
Cow position:
               
chr13:20360057-20360372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 13
               

               
Conread position:
               
212-533
               

               
Cow position:
               
chr13:2803267-2803571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
212-533
               

               
Cow position:
               
chr13:18058464-18058143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 9
               

               
Conread position:
               
212-583
               

               
Cow position:
               
chr13:9899927-9900305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 182
               

               
Conread position:
               
212-583
               

               
Cow position:
               
chr13:19582301-19581931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
11, 75
               

               
Conread position:
               
212-586
               

               
Cow position:
               
chr13:54582657-54583036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
122, 9
               

               
Conread position:
               
212-662
               

               
Cow position:
               
chr13:18170834-18170364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
72, 205
               

               
Conread position:
               
212-667
               

               
Cow position:
               
chr13:44322675-44323130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 9
               

               
Conread position:
               
212-685
               

               
Cow position:
               
chr13:24715030-24715486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 80
               

               
Conread position:
               
212-700
               

               
Cow position:
               
chr13:43479842-43480319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
503
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 20
               

               
Conread position:
               
212-710
               

               
Cow position:
               
chr13:6189817-6189357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
509
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
134, 9
               

               
Conread position:
               
212-710
               

               
Cow position:
               
chr13:6973943-6974439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
515
               

               
Alignm identity:
               
396
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 114
               

               
Conread position:
               
212-713
               

               
Cow position:
               
chr13:25537418-25537918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
517
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
276, 51
               

               
Conread position:
               
212-713
               

               
Cow position:
               
chr13:43139418-43138952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
503
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
387, 72
               

               
Conread position:
               
212-718
               

               
Cow position:
               
chr13:41919380-41918885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
522
               

               
Alignm identity:
               
359
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 173
               

               
Conread position:
               
212-751
               

               
Cow position:
               
chr13:4037703-4038207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
557
               

               
Alignm identity:
               
395
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
387, 60
               

               
Conread position:
               
212-787
               

               
Cow position:
               
chr13:6079621-6079067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
584
               

               
Alignm identity:
               
426
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 11
               

               
Conread position:
               
213-334
               

               
Cow position:
               
chr13:55327221-55327346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
213-338
               

               
Cow position:
               
chr13:8682233-8682362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
213-340
               

               
Cow position:
               
chr13:34606471-34606602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
213-340
               

               
Cow position:
               
chr13:43577769-43577900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
213-370
               

               
Cow position:
               
chr13:17015339-17015180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
89, 97
               

               
Conread position:
               
213-378
               

               
Cow position:
               
chr13:41979355-41979191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
66, 84
               

               
Conread position:
               
213-386
               

               
Cow position:
               
chr13:1339362-1339179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
79, 10
               

               
Conread position:
               
213-386
               

               
Cow position:
               
chr13:4965182-4965353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
129, 85
               

               
Conread position:
               
213-388
               

               
Cow position:
               
chr13:17994591-17994409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
213-388
               

               
Cow position:
               
chr13:53357611-53357797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
213-389
               

               
Cow position:
               
chr13:52464521-52464706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
213-390
               

               
Cow position:
               
chr13:21246931-21246743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
213-390
               

               
Cow position:
               
chr13:49283996-49283814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
116, 89
               

               
Conread position:
               
213-391
               

               
Cow position:
               
chr13:3149651-3149464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
213-391
               

               
Cow position:
               
chr13:20368101-20367912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
213-410
               

               
Cow position:
               
chr13:42302260-42302056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
80, 177
               

               
Conread position:
               
213-411
               

               
Cow position:
               
chr13:1322443-1322650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
79, 167
               

               
Conread position:
               
213-412
               

               
Cow position:
               
chr13:53865416-53865622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
18, 38
               

               
Conread position:
               
213-415
               

               
Cow position:
               
chr13:24094535-24094328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
75, 100
               

               
Conread position:
               
213-421
               

               
Cow position:
               
chr13:4790341-4790122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
76, 192
               

               
Conread position:
               
213-425
               

               
Cow position:
               
chr13:30396500-30396705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
91, 130
               

               
Conread position:
               
213-438
               

               
Cow position:
               
chr13:45439314-45439534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
213-439
               

               
Cow position:
               
chr13:270850-271091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
213-440
               

               
Cow position:
               
chr13:13775471-13775230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
89, 197
               

               
Conread position:
               
213-440
               

               
Cow position:
               
chr13:25941480-25941250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
81, 30
               

               
Conread position:
               
213-441
               

               
Cow position:
               
chr13:37584599-37584836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
82, 194
               

               
Conread position:
               
213-442
               

               
Cow position:
               
chr13:7440155-7440383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
58, 28
               

               
Conread position:
               
213-443
               

               
Cow position:
               
chr13:84371-84595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
11, 41
               

               
Conread position:
               
213-446
               

               
Cow position:
               
chr13:23805240-23804986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
213-472
               

               
Cow position:
               
chr13:12423184-12423449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
81, 190
               

               
Conread position:
               
213-478
               

               
Cow position:
               
chr13:52641169-52640902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
78, 50
               

               
Conread position:
               
213-486
               

               
Cow position:
               
chr13:21128907-21129183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
79, 63
               

               
Conread position:
               
213-511
               

               
Cow position:
               
chr13:18299176-18299485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
84, 247
               

               
Conread position:
               
213-524
               

               
Cow position:
               
chr13:12770411-12770097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
44, 225
               

               
Conread position:
               
213-533
               

               
Cow position:
               
chr13:3160184-3160494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
127, 77
               

               
Conread position:
               
213-582
               

               
Cow position:
               
chr13:19188096-19188454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 86
               

               
Conread position:
               
213-583
               

               
Cow position:
               
chr13:6540519-6540156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
209, 71
               

               
Conread position:
               
213-589
               

               
Cow position:
               
chr13:28139363-28139728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
44, 85
               

               
Conread position:
               
213-597
               

               
Cow position:
               
chr13:25604824-25604466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
6, 18
               

               
Conread position:
               
213-616
               

               
Cow position:
               
chr13:20088937-20088523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
77, 195
               

               
Conread position:
               
213-664
               

               
Cow position:
               
chr13:13504488-13504020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
79, 10
               

               
Conread position:
               
213-689
               

               
Cow position:
               
chr13:34995530-34995073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 70
               

               
Conread position:
               
213-689
               

               
Cow position:
               
chr13:48252186-48251739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
80, 24
               

               
Conread position:
               
213-703
               

               
Cow position:
               
chr13:15041692-15041205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
505
               

               
Alignm identity:
               
376
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 10
               

               
Conread position:
               
213-710
               

               
Cow position:
               
chr13:1170240-1170742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
517
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 228
               

               
Conread position:
               
213-710
               

               
Cow position:
               
chr13:20893862-20893368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
518
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 156
               

               
Conread position:
               
213-713
               

               
Cow position:
               
chr13:1231424-1231927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
519
               

               
Alignm identity:
               
359
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 87
               

               
Conread position:
               
213-714
               

               
Cow position:
               
chr13:32282908-32283401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
518
               

               
Alignm identity:
               
375
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 21
               

               
Conread position:
               
213-785
               

               
Cow position:
               
chr13:41806558-41807141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
605
               

               
Alignm identity:
               
432
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 45
               

               
Conread position:
               
213-797
               

               
Cow position:
               
chr13:52893930-52894514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
609
               

               
Alignm identity:
               
433
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 50
               

               
Conread position:
               
214-413
               

               
Cow position:
               
chr13:13527191-13526992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
88, 9
               

               
Conread position:
               
214-470
               

               
Cow position:
               
chr13:3143031-3143290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
81, 38
               

               
Conread position:
               
214-478
               

               
Cow position:
               
chr13:1147369-1147103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
7, 187
               

               
Conread position:
               
214-527
               

               
Cow position:
               
chr13:25978411-25978094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 181
               

               
Conread position:
               
214-532
               

               
Cow position:
               
chr13:15659058-15659377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
88, 193
               

               
Conread position:
               
214-540
               

               
Cow position:
               
chr13:39826338-39826662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
76, 38
               

               
Conread position:
               
214-582
               

               
Cow position:
               
chr13:5671802-5671441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
120, 9
               

               
Conread position:
               
214-585
               

               
Cow position:
               
chr13:21136129-21135746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
71, 244
               

               
Conread position:
               
214-713
               

               
Cow position:
               
chr13:151753-152219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
507
               

               
Alignm identity:
               
359
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 31
               

               
Conread position:
               
214-713
               

               
Cow position:
               
chr13:34507678-34508153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
512
               

               
Alignm identity:
               
363
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 51
               

               
Conread position:
               
215-329
               

               
Cow position:
               
chr13:53634200-53634312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
115
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
215-375
               

               
Cow position:
               
chr13:6972164-6972334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
83, 48
               

               
Conread position:
               
215-441
               

               
Cow position:
               
chr13:14644838-14645066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
122, 16
               

               
Conread position:
               
215-499
               

               
Cow position:
               
chr13:6860959-6861251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 190
               

               
Conread position:
               
215-508
               

               
Cow position:
               
chr13:7149021-7149306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
178, 40
               

               
Conread position:
               
215-531
               

               
Cow position:
               
chr13:11321816-11321515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
120, 30
               

               
Conread position:
               
215-572
               

               
Cow position:
               
chr13:45074119-45073783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
69, 106
               

               
Conread position:
               
215-572
               

               
Cow position:
               
chr13:52749679-52749336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 53
               

               
Conread position:
               
215-641
               

               
Cow position:
               
chr13:61188312-61188736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
83, 193
               

               
Conread position:
               
215-644
               

               
Cow position:
               
chr13:19223435-19223853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 162
               

               
Conread position:
               
215-644
               

               
Cow position:
               
chr13:57475633-57475213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 134
               

               
Conread position:
               
215-661
               

               
Cow position:
               
chr13:5263495-5263065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 83
               

               
Conread position:
               
215-667
               

               
Cow position:
               
chr13:17114598-17114153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 188
               

               
Conread position:
               
215-683
               

               
Cow position:
               
chr13:60600152-60599695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
79, 193
               

               
Conread position:
               
215-713
               

               
Cow position:
               
chr13:8362963-8362469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
516
               

               
Alignm identity:
               
394
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 171
               

               
Conread position:
               
215-713
               

               
Cow position:
               
chr13:42860783-42860296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
511
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 37
               

               
Conread position:
               
215-718
               

               
Cow position:
               
chr13:30650969-30651456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
519
               

               
Alignm identity:
               
370
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 191
               

               
Conread position:
               
215-722
               

               
Cow position:
               
chr13:26480419-26479931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
522
               

               
Alignm identity:
               
369
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 34
               

               
Conread position:
               
216-373
               

               
Cow position:
               
chr13:21955285-21955116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
216-389
               

               
Cow position:
               
chr13:28376777-28376595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
216-390
               

               
Cow position:
               
chr13:33854896-33854718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
118, 33
               

               
Conread position:
               
216-394
               

               
Cow position:
               
chr13:8393097-8392927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
125, 45
               

               
Conread position:
               
216-394
               

               
Cow position:
               
chr13:25521139-25520945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
216-396
               

               
Cow position:
               
chr13:23685218-23685027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
216-401
               

               
Cow position:
               
chr13:8240463-8240641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
175, 84
               

               
Conread position:
               
216-405
               

               
Cow position:
               
chr13:45499015-45499208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
7, 83
               

               
Conread position:
               
216-414
               

               
Cow position:
               
chr13:1363245-1363445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
80, 120
               

               
Conread position:
               
216-422
               

               
Cow position:
               
chr13:5447332-5447551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
30, 150
               

               
Conread position:
               
216-424
               

               
Cow position:
               
chr13:18093084-18092877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
118, 51
               

               
Conread position:
               
216-433
               

               
Cow position:
               
chr13:15144046-15143836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
86, 80
               

               
Conread position:
               
216-438
               

               
Cow position:
               
chr13:28071662-28071885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
88, 31
               

               
Conread position:
               
216-440
               

               
Cow position:
               
chr13:14411676-14411909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
76, 154
               

               
Conread position:
               
216-441
               

               
Cow position:
               
chr13:56535252-56535470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
104, 0
               

               
Conread position:
               
216-475
               

               
Cow position:
               
chr13:17611766-17611505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
118, 84
               

               
Conread position:
               
216-494
               

               
Cow position:
               
chr13:62007892-62008176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 184
               

               
Conread position:
               
216-499
               

               
Cow position:
               
chr13:38035624-38035907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
118, 87
               

               
Conread position:
               
216-505
               

               
Cow position:
               
chr13:7149714-7149439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
121, 37
               

               
Conread position:
               
216-512
               

               
Cow position:
               
chr13:13196025-13196323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
15, 58
               

               
Conread position:
               
216-524
               

               
Cow position:
               
chr13:56035072-56034765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 81
               

               
Conread position:
               
216-525
               

               
Cow position:
               
chr13:45073461-45073162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
118, 33
               

               
Conread position:
               
216-533
               

               
Cow position:
               
chr13:21280716-21280384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
73, 238
               

               
Conread position:
               
216-533
               

               
Cow position:
               
chr13:60375703-60375385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
69, 77
               

               
Conread position:
               
216-534
               

               
Cow position:
               
chr13:13533877-13533566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 82
               

               
Conread position:
               
216-534
               

               
Cow position:
               
chr13:17438077-17437765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
51, 193
               

               
Conread position:
               
216-534
               

               
Cow position:
               
chr13:47322607-47322301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
83, 21
               

               
Conread position:
               
216-545
               

               
Cow position:
               
chr13:1568719-1569037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
122, 68
               

               
Conread position:
               
216-578
               

               
Cow position:
               
chr13:26742910-26743274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
95, 184
               

               
Conread position:
               
216-618
               

               
Cow position:
               
chr13:49023081-49022692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 181
               

               
Conread position:
               
216-627
               

               
Cow position:
               
chr13:55582979-55583386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 97
               

               
Conread position:
               
216-629
               

               
Cow position:
               
chr13:15195416-15195020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 83
               

               
Conread position:
               
216-646
               

               
Cow position:
               
chr13:46111753-46112173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 65
               

               
Conread position:
               
216-660
               

               
Cow position:
               
chr13:18491392-18491814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 34
               

               
Conread position:
               
216-663
               

               
Cow position:
               
chr13:52198890-52199312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
179, 33
               

               
Conread position:
               
216-665
               

               
Cow position:
               
chr13:15193103-15192669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 169
               

               
Conread position:
               
216-667
               

               
Cow position:
               
chr13:20497427-20497879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 243
               

               
Conread position:
               
216-667
               

               
Cow position:
               
chr13:20881136-20880699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
134, 79
               

               
Conread position:
               
216-681
               

               
Cow position:
               
chr13:15621594-15622052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 185
               

               
Conread position:
               
216-686
               

               
Cow position:
               
chr13:42200405-42200868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
364
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 76
               

               
Conread position:
               
216-688
               

               
Cow position:
               
chr13:17977127-17977580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
72, 174
               

               
Conread position:
               
216-689
               

               
Cow position:
               
chr13:14063736-14063275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 81
               

               
Conread position:
               
216-696
               

               
Cow position:
               
chr13:54418005-54418490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
500
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
75, 99
               

               
Conread position:
               
216-702
               

               
Cow position:
               
chr13:54701966-54702456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
507
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 44
               

               
Conread position:
               
216-713
               

               
Cow position:
               
chr13:17821473-17820983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
503
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
358, 107
               

               
Conread position:
               
216-713
               

               
Cow position:
               
chr13:25435321-25434852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 69
               

               
Conread position:
               
216-713
               

               
Cow position:
               
chr13:46515844-46516339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
518
               

               
Alignm identity:
               
377
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 29
               

               
Conread position:
               
216-718
               

               
Cow position:
               
chr13:9975283-9974785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
520
               

               
Alignm identity:
               
369
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 73
               

               
Conread position:
               
216-718
               

               
Cow position:
               
chr13:25695982-25695487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
515
               

               
Alignm identity:
               
364
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 182
               

               
Conread position:
               
216-718
               

               
Cow position:
               
chr13:34281466-34281961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
516
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 60
               

               
Conread position:
               
216-783
               

               
Cow position:
               
chr13:12670667-12670084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
598
               

               
Alignm identity:
               
408
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 45
               

               
Conread position:
               
216-792
               

               
Cow position:
               
chr13:19022049-19022629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
597
               

               
Alignm identity:
               
402
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 190
               

               
Conread position:
               
216-797
               

               
Cow position:
               
chr13:17292343-17291771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
597
               

               
Alignm identity:
               
391
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 48
               

               
Conread position:
               
216-797
               

               
Cow position:
               
chr13:46525644-46525071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
608
               

               
Alignm identity:
               
403
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
93, 152
               

               
Conread position:
               
217-334
               

               
Cow position:
               
chr13:18874918-18875039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
122
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
217-339
               

               
Cow position:
               
chr13:15114253-15114379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
217-340
               

               
Cow position:
               
chr13:2529166-2529041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
217-340
               

               
Cow position:
               
chr13:55007984-55007863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
217-351
               

               
Cow position:
               
chr13:26482997-26482858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
217-374
               

               
Cow position:
               
chr13:23823244-23823084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
117, 81
               

               
Conread position:
               
217-388
               

               
Cow position:
               
chr13:48373530-48373354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
124, 0
               

               
Conread position:
               
217-389
               

               
Cow position:
               
chr13:54128045-54127866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
77, 161
               

               
Conread position:
               
217-391
               

               
Cow position:
               
chr13:29802413-29802582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
217-408
               

               
Cow position:
               
chr13:11146839-11147039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
75, 186
               

               
Conread position:
               
217-410
               

               
Cow position:
               
chr13:20042478-20042281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
75, 176
               

               
Conread position:
               
217-411
               

               
Cow position:
               
chr13:36345733-36345927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
72, 27
               

               
Conread position:
               
217-441
               

               
Cow position:
               
chr13:24215891-24215658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
87, 181
               

               
Conread position:
               
217-442
               

               
Cow position:
               
chr13:13478895-13478659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
70, 196
               

               
Conread position:
               
217-516
               

               
Cow position:
               
chr13:18696609-18696929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
59, 202
               

               
Conread position:
               
217-525
               

               
Cow position:
               
chr13:28291106-28291420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
67, 103
               

               
Conread position:
               
217-527
               

               
Cow position:
               
chr13:6663970-6663650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 166
               

               
Conread position:
               
217-581
               

               
Cow position:
               
chr13:38697843-38698205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
82, 32
               

               
Conread position:
               
217-664
               

               
Cow position:
               
chr13:37818958-37818536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
126, 35
               

               
Conread position:
               
217-665
               

               
Cow position:
               
chr13:7076026-7076481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 199
               

               
Conread position:
               
217-671
               

               
Cow position:
               
chr13:55674424-55673973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 185
               

               
Conread position:
               
217-684
               

               
Cow position:
               
chr13:13501825-13501374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
382, 181
               

               
Conread position:
               
217-697
               

               
Cow position:
               
chr13:21288299-21287829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 80
               

               
Conread position:
               
217-713
               

               
Cow position:
               
chr13:9906514-9907013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
511
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 239
               

               
Conread position:
               
217-713
               

               
Cow position:
               
chr13:10989288-10988797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
512
               

               
Alignm identity:
               
375
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 73
               

               
Conread position:
               
217-713
               

               
Cow position:
               
chr13:15872223-15872726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
515
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 216
               

               
Conread position:
               
218-330
               

               
Cow position:
               
chr13:25380730-25380847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
5, 104
               

               
Conread position:
               
218-335
               

               
Cow position:
               
chr13:30809588-30809469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
218-367
               

               
Cow position:
               
chr13:31398244-31398402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
74, 24
               

               
Conread position:
               
218-376
               

               
Cow position:
               
chr13:22345488-22345322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
45, 82
               

               
Conread position:
               
218-377
               

               
Cow position:
               
chr13:13503304-13503469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
118, 47
               

               
Conread position:
               
218-377
               

               
Cow position:
               
chr13:53619787-53619957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
218-399
               

               
Cow position:
               
chr13:48126891-48127082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
74, 185
               

               
Conread position:
               
218-407
               

               
Cow position:
               
chr13:52913663-52913854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
116, 78
               

               
Conread position:
               
218-409
               

               
Cow position:
               
chr13:11410495-11410697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
77, 93
               

               
Conread position:
               
218-419
               

               
Cow position:
               
chr13:17058069-17057855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
33, 182
               

               
Conread position:
               
218-436
               

               
Cow position:
               
chr13:6980712-6980929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
119, 76
               

               
Conread position:
               
218-442
               

               
Cow position:
               
chr13:33054586-33054357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
76, 181
               

               
Conread position:
               
218-476
               

               
Cow position:
               
chr13:45108614-45108366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
218-478
               

               
Cow position:
               
chr13:25969792-25970042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
78, 128
               

               
Conread position:
               
218-527
               

               
Cow position:
               
chr13:52070620-52070912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
5, 54
               

               
Conread position:
               
218-579
               

               
Cow position:
               
chr13:44003486-44003865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 27
               

               
Conread position:
               
218-583
               

               
Cow position:
               
chr13:5758545-5758189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 27
               

               
Conread position:
               
218-644
               

               
Cow position:
               
chr13:37593159-37592734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 33
               

               
Conread position:
               
218-689
               

               
Cow position:
               
chr13:12925583-12926043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
286, 52
               

               
Conread position:
               
218-689
               

               
Cow position:
               
chr13:16014590-16015060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
497
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 34
               

               
Conread position:
               
218-698
               

               
Cow position:
               
chr13:17021939-17021458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
497
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 184
               

               
Conread position:
               
218-710
               

               
Cow position:
               
chr13:61977171-61976691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
507
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 133
               

               
Conread position:
               
218-713
               

               
Cow position:
               
chr13:18989509-18989982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
512
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 118
               

               
Conread position:
               
218-718
               

               
Cow position:
               
chr13:20174524-20175020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
522
               

               
Alignm identity:
               
383
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 243
               

               
Conread position:
               
219-369
               

               
Cow position:
               
chr13:10055204-10055367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
219-435
               

               
Cow position:
               
chr13:8699955-8699728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
68, 186
               

               
Conread position:
               
219-437
               

               
Cow position:
               
chr13:26100176-26100405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
75, 37
               

               
Conread position:
               
219-446
               

               
Cow position:
               
chr13:42640168-42640402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
29, 189
               

               
Conread position:
               
219-478
               

               
Cow position:
               
chr13:17350131-17350401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
56, 158
               

               
Conread position:
               
219-662
               

               
Cow position:
               
chr13:20509515-20509952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
42, 225
               

               
Conread position:
               
219-679
               

               
Cow position:
               
chr13:21242288-21241854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
70, 117
               

               
Conread position:
               
219-705
               

               
Cow position:
               
chr13:15445837-15446315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
499
               

               
Alignm identity:
               
369
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
157, 70
               

               
Conread position:
               
219-713
               

               
Cow position:
               
chr13:15958410-15958898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
508
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 57
               

               
Conread position:
               
221-433
               

               
Cow position:
               
chr13:16908003-16908224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
68, 182
               

               
Conread position:
               
221-438
               

               
Cow position:
               
chr13:6926302-6926529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
77, 183
               

               
Conread position:
               
221-471
               

               
Cow position:
               
chr13:55494729-55494479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
116, 29
               

               
Conread position:
               
221-526
               

               
Cow position:
               
chr13:46329813-46329508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
118, 24
               

               
Conread position:
               
221-647
               

               
Cow position:
               
chr13:48597699-48598111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
113, 179
               

               
Conread position:
               
221-689
               

               
Cow position:
               
chr13:4665060-4664608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
113, 77
               

               
Conread position:
               
221-689
               

               
Cow position:
               
chr13:16343500-16343939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
384, 78
               

               
Conread position:
               
222-373
               

               
Cow position:
               
chr13:20214225-20214388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
222-373
               

               
Cow position:
               
chr13:40483189-40483029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
80, 100
               

               
Conread position:
               
222-389
               

               
Cow position:
               
chr13:13780967-13781145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
222-433
               

               
Cow position:
               
chr13:49356258-49356042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
119, 177
               

               
Conread position:
               
222-443
               

               
Cow position:
               
chr13:14035208-14034978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
70, 176
               

               
Conread position:
               
222-451
               

               
Cow position:
               
chr13:2776075-2776314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
72, 181
               

               
Conread position:
               
222-478
               

               
Cow position:
               
chr13:20115035-20115301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
73, 237
               

               
Conread position:
               
222-533
               

               
Cow position:
               
chr13:24692749-24693054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
62, 30
               

               
Conread position:
               
222-654
               

               
Cow position:
               
chr13:15257576-15257164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
70, 22
               

               
Conread position:
               
222-688
               

               
Cow position:
               
chr13:20784385-20784840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
115, 76
               

               
Conread position:
               
222-713
               

               
Cow position:
               
chr13:15289128-15288654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
503
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 76
               

               
Conread position:
               
222-713
               

               
Cow position:
               
chr13:33256288-33256773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
510
               

               
Alignm identity:
               
359
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 147
               

               
Conread position:
               
223-335
               

               
Cow position:
               
chr13:23399558-23399670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
113
               

               
Alignm identity:
               
90
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
223-562
               

               
Cow position:
               
chr13:6442315-6441975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 57
               

               
Conread position:
               
223-698
               

               
Cow position:
               
chr13:34729049-34728575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
359
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 25
               

               
Conread position:
               
224-441
               

               
Cow position:
               
chr13:50457644-50457873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
68, 182
               

               
Conread position:
               
224-467
               

               
Cow position:
               
chr13:48409161-48409424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
224-625
               

               
Cow position:
               
chr13:17338218-17338619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 191
               

               
Conread position:
               
229-370
               

               
Cow position:
               
chr13:21070803-21070950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
229-394
               

               
Cow position:
               
chr13:24372156-24371975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
63, 170
               

               
Conread position:
               
229-439
               

               
Cow position:
               
chr13:56958775-56958981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 123
               

               
Conread position:
               
229-440
               

               
Cow position:
               
chr13:58149100-58149314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
57, 90
               

               
Conread position:
               
229-455
               

               
Cow position:
               
chr13:54353246-54353013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
55, 173
               

               
Conread position:
               
229-486
               

               
Cow position:
               
chr13:19174897-19174636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
62, 174
               

               
Conread position:
               
229-497
               

               
Cow position:
               
chr13:23214812-23215085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
63, 178
               

               
Conread position:
               
229-718
               

               
Cow position:
               
chr13:20814476-20814002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
506
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 175
               

               
Conread position:
               
230-333
               

               
Cow position:
               
chr13:24686339-24686442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
104
               

               
Alignm identity:
               
85
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
230-335
               

               
Cow position:
               
chr13:37405513-37405615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
106
               

               
Alignm identity:
               
88
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
230-377
               

               
Cow position:
               
chr13:57446314-57446165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
107, 68
               

               
Conread position:
               
230-379
               

               
Cow position:
               
chr13:26109796-26109957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
66, 152
               

               
Conread position:
               
230-390
               

               
Cow position:
               
chr13:6976042-6975879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
107, 13
               

               
Conread position:
               
230-393
               

               
Cow position:
               
chr13:9492575-9492741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
107, 20
               

               
Conread position:
               
230-400
               

               
Cow position:
               
chr13:52027337-52027161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
26, 68
               

               
Conread position:
               
230-402
               

               
Cow position:
               
chr13:8537617-8537800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
62, 179
               

               
Conread position:
               
230-425
               

               
Cow position:
               
chr13:33974173-33973969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
62, 173
               

               
Conread position:
               
230-436
               

               
Cow position:
               
chr13:4404333-4404541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
109, 46
               

               
Conread position:
               
230-440
               

               
Cow position:
               
chr13:18340329-18340547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
26, 167
               

               
Conread position:
               
230-440
               

               
Cow position:
               
chr13:18615170-18615398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
42, 179
               

               
Conread position:
               
230-440
               

               
Cow position:
               
chr13:51207689-51207470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
65, 173
               

               
Conread position:
               
230-475
               

               
Cow position:
               
chr13:20217599-20217350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
104, 169
               

               
Conread position:
               
230-476
               

               
Cow position:
               
chr13:25504334-25504579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
28, 72
               

               
Conread position:
               
230-476
               

               
Cow position:
               
chr13:35557312-35557059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
104, 166
               

               
Conread position:
               
230-494
               

               
Cow position:
               
chr13:6264597-6264859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
68, 13
               

               
Conread position:
               
230-508
               

               
Cow position:
               
chr13:38873158-38872874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
54, 165
               

               
Conread position:
               
230-519
               

               
Cow position:
               
chr13:20473876-20473593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
65, 101
               

               
Conread position:
               
230-521
               

               
Cow position:
               
chr13:20137616-20137915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 218
               

               
Conread position:
               
230-524
               

               
Cow position:
               
chr13:50751253-50750960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
102, 53
               

               
Conread position:
               
230-525
               

               
Cow position:
               
chr13:20288137-20288425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
104, 151
               

               
Conread position:
               
230-532
               

               
Cow position:
               
chr13:19278894-19279194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
68, 33
               

               
Conread position:
               
230-535
               

               
Cow position:
               
chr13:39423626-39423924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
65, 15
               

               
Conread position:
               
230-536
               

               
Cow position:
               
chr13:49475870-49476191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 236
               

               
Conread position:
               
230-537
               

               
Cow position:
               
chr13:18929324-18929634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 142
               

               
Conread position:
               
230-551
               

               
Cow position:
               
chr13:8667414-8667733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 160
               

               
Conread position:
               
230-592
               

               
Cow position:
               
chr13:18999330-18999693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 179
               

               
Conread position:
               
230-667
               

               
Cow position:
               
chr13:12206860-12207270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
373, 58
               

               
Conread position:
               
230-684
               

               
Cow position:
               
chr13:15974417-15974858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 80
               

               
Conread position:
               
230-684
               

               
Cow position:
               
chr13:37069140-37069597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 173
               

               
Conread position:
               
230-698
               

               
Cow position:
               
chr13:11260076-11260515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 68
               

               
Conread position:
               
230-709
               

               
Cow position:
               
chr13:60966578-60967037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
220, 62
               

               
Conread position:
               
230-710
               

               
Cow position:
               
chr13:27525460-27524988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 19
               

               
Conread position:
               
231-363
               

               
Cow position:
               
chr13:25313349-25313210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
67, 32
               

               
Conread position:
               
231-383
               

               
Cow position:
               
chr13:16711147-16711308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
61, 36
               

               
Conread position:
               
231-389
               

               
Cow position:
               
chr13:10711614-10711450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
106, 12
               

               
Conread position:
               
231-587
               

               
Cow position:
               
chr13:14016762-14016409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
64, 24
               

               
Conread position:
               
231-627
               

               
Cow position:
               
chr13:26848031-26847637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 50
               

               
Conread position:
               
231-661
               

               
Cow position:
               
chr13:30025929-30026333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 21
               

               
Conread position:
               
231-667
               

               
Cow position:
               
chr13:24369385-24369812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 15
               

               
Conread position:
               
231-686
               

               
Cow position:
               
chr13:26261992-26261544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 175
               

               
Conread position:
               
231-710
               

               
Cow position:
               
chr13:37521949-37521460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
503
               

               
Alignm identity:
               
361
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 80
               

               
Conread position:
               
231-714
               

               
Cow position:
               
chr13:57494373-57493906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
368, 66
               

               
Conread position:
               
232-340
               

               
Cow position:
               
chr13:8423202-8423314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
113
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
232-388
               

               
Cow position:
               
chr13:19618955-19618781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
232-418
               

               
Cow position:
               
chr13:20795407-20795218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
60, 172
               

               
Conread position:
               
232-429
               

               
Cow position:
               
chr13:52536372-52536568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
104, 40
               

               
Conread position:
               
232-440
               

               
Cow position:
               
chr13:15083462-15083673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
60, 87
               

               
Conread position:
               
232-441
               

               
Cow position:
               
chr13:6465882-6465675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
102, 49
               

               
Conread position:
               
232-441
               

               
Cow position:
               
chr13:20090566-20090364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
232-512
               

               
Cow position:
               
chr13:51128275-51127988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
52, 192
               

               
Conread position:
               
232-519
               

               
Cow position:
               
chr13:20250702-20250996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
62, 222
               

               
Conread position:
               
232-528
               

               
Cow position:
               
chr13:19779054-19778750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 207
               

               
Conread position:
               
232-535
               

               
Cow position:
               
chr13:20534701-20534986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
105, 13
               

               
Conread position:
               
232-542
               

               
Cow position:
               
chr13:18994923-18995239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 151
               

               
Conread position:
               
232-661
               

               
Cow position:
               
chr13:59688062-59687658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
316, 72
               

               
Conread position:
               
232-685
               

               
Cow position:
               
chr13:38012140-38012610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 122
               

               
Conread position:
               
232-698
               

               
Cow position:
               
chr13:24155311-24155804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
508
               

               
Alignm identity:
               
382
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 151
               

               
Conread position:
               
232-713
               

               
Cow position:
               
chr13:20570529-20571000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
499
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 157
               

               
Conread position:
               
232-713
               

               
Cow position:
               
chr13:49804789-49805245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 17
               

               
Conread position:
               
233-718
               

               
Cow position:
               
chr13:52057360-52057819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
499
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
101, 28
               

               
Conread position:
               
234-498
               

               
Cow position:
               
chr13:60651086-60650835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
196, 63
               

               
Conread position:
               
234-536
               

               
Cow position:
               
chr13:16714463-16714156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
54, 84
               

               
Conread position:
               
234-579
               

               
Cow position:
               
chr13:54389215-54388869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
100, 11
               

               
Conread position:
               
234-629
               

               
Cow position:
               
chr13:15991428-15991033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 172
               

               
Conread position:
               
234-706
               

               
Cow position:
               
chr13:44626168-44626649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 172
               

               
Conread position:
               
235-446
               

               
Cow position:
               
chr13:52637101-52637321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
69, 160
               

               
Conread position:
               
235-680
               

               
Cow position:
               
chr13:5279402-5278944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 327
               

               
Conread position:
               
236-436
               

               
Cow position:
               
chr13:7104460-7104664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
98, 65
               

               
Conread position:
               
236-472
               

               
Cow position:
               
chr13:8408424-8408673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
59, 167
               

               
Conread position:
               
237-457
               

               
Cow position:
               
chr13:18681089-18681316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
61, 166
               

               
Conread position:
               
237-654
               

               
Cow position:
               
chr13:51015378-51014966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 148
               

               
Conread position:
               
237-654
               

               
Cow position:
               
chr13:52228292-52227886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 60
               

               
Conread position:
               
238-425
               

               
Cow position:
               
chr13:37751263-37751068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
44, 145
               

               
Conread position:
               
238-425
               

               
Cow position:
               
chr13:38703068-38702877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
62, 17
               

               
Conread position:
               
238-521
               

               
Cow position:
               
chr13:9386216-9385937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
15, 5
               

               
Conread position:
               
239-667
               

               
Cow position:
               
chr13:12282644-12283062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
59, 73
               

               
Conread position:
               
240-640
               

               
Cow position:
               
chr13:24230018-24230413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 171
               

               
Conread position:
               
241-711
               

               
Cow position:
               
chr13:20606311-20605844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 162
               

               
Conread position:
               
242-713
               

               
Cow position:
               
chr13:42229112-42229596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
500
               

               
Alignm identity:
               
364
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 85
               

               
Conread position:
               
243-659
               

               
Cow position:
               
chr13:17004788-17004373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
41, 167
               

               
Conread position:
               
244-412
               

               
Cow position:
               
chr13:20110424-20110599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
249-478
               

               
Cow position:
               
chr13:7190785-7191027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
86, 23
               

               
Conread position:
               
250-530
               

               
Cow position:
               
chr13:20871212-20871489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
94, 33
               

               
Conread position:
               
250-689
               

               
Cow position:
               
chr13:23478847-23479282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 154
               

               
Conread position:
               
250-709
               

               
Cow position:
               
chr13:20666567-20666115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 131
               

               
Conread position:
               
252-664
               

               
Cow position:
               
chr13:43919445-43919031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
37, 152
               

               
Conread position:
               
254-407
               

               
Cow position:
               
chr13:17716695-17716533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
40, 149
               

               
Conread position:
               
255-713
               

               
Cow position:
               
chr13:47756183-47756651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
47, 204
               

               
Conread position:
               
256-667
               

               
Cow position:
               
chr13:25547761-25547366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 152
               

               
Conread position:
               
257-476
               

               
Cow position:
               
chr13:8232835-8233041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
72, 43
               

               
Conread position:
               
257-718
               

               
Cow position:
               
chr13:40943065-40943524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 148
               

               
Conread position:
               
257-748
               

               
Cow position:
               
chr13:13765618-13766079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
503
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 18
               

               
Conread position:
               
260-563
               

               
Cow position:
               
chr13:37640418-37640712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
14, 55
               

               
Conread position:
               
262-525
               

               
Cow position:
               
chr13:53553435-53553168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
23, 145
               

               
Conread position:
               
263-418
               

               
Cow position:
               
chr13:37980927-37980766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
41, 132
               

               
Conread position:
               
266-578
               

               
Cow position:
               
chr13:46736053-46736364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 23
               

               
Conread position:
               
272-394
               

               
Cow position:
               
chr13:39297516-39297394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
123
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
272-478
               

               
Cow position:
               
chr13:37503745-37503533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
14, 100
               

               
Conread position:
               
272-586
               

               
Cow position:
               
chr13:15110155-15110479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
65, 127
               

               
Conread position:
               
275-472
               

               
Cow position:
               
chr13:51814088-51813889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
35, 62
               

               
Conread position:
               
275-490
               

               
Cow position:
               
chr13:8659898-8660107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
17, 84
               

               
Conread position:
               
275-667
               

               
Cow position:
               
chr13:43194009-43194402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
16, 185
               

               
Conread position:
               
277-629
               

               
Cow position:
               
chr13:21283858-21283517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 103
               

               
Conread position:
               
278-391
               

               
Cow position:
               
chr13:15808615-15808733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
56, 80
               

               
Conread position:
               
278-531
               

               
Cow position:
               
chr13:3989051-3989304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
58, 33
               

               
Conread position:
               
278-667
               

               
Cow position:
               
chr13:43185030-43184645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 10
               

               
Conread position:
               
278-713
               

               
Cow position:
               
chr13:7663575-7663152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 14
               

               
Conread position:
               
279-701
               

               
Cow position:
               
chr13:28683208-28683623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
19, 122
               

               
Conread position:
               
281-667
               

               
Cow position:
               
chr13:20706355-20705976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
52, 121
               

               
Conread position:
               
282-707
               

               
Cow position:
               
chr13:1043109-1042685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 16
               

               
Conread position:
               
283-702
               

               
Cow position:
               
chr13:18172186-18172591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
18, 121
               

               
Conread position:
               
283-777
               

               
Cow position:
               
chr13:53566463-53566951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
515
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
22, 30
               

               
Conread position:
               
284-411
               

               
Cow position:
               
chr13:39398503-39398636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
11, 116
               

               
Conread position:
               
284-415
               

               
Cow position:
               
chr13:52612687-52612817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
66, 109
               

               
Conread position:
               
284-436
               

               
Cow position:
               
chr13:19750568-19750725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
53, 76
               

               
Conread position:
               
284-540
               

               
Cow position:
               
chr13:13297532-13297783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
111, 0
               

               
Conread position:
               
284-586
               

               
Cow position:
               
chr13:61990465-61990179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
45, 25
               

               
Conread position:
               
284-627
               

               
Cow position:
               
chr13:2404615-2404930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
280, 39
               

               
Conread position:
               
284-629
               

               
Cow position:
               
chr13:14771303-14771650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 121
               

               
Conread position:
               
284-661
               

               
Cow position:
               
chr13:20679192-20679566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
53, 118
               

               
Conread position:
               
284-663
               

               
Cow position:
               
chr13:15282079-15281715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 14
               

               
Conread position:
               
284-667
               

               
Cow position:
               
chr13:55316342-55315962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
55, 13
               

               
Conread position:
               
284-669
               

               
Cow position:
               
chr13:2413882-2414254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 117
               

               
Conread position:
               
284-670
               

               
Cow position:
               
chr13:17439915-17439536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
54, 98
               

               
Conread position:
               
284-688
               

               
Cow position:
               
chr13:23167250-23166845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 114
               

               
Conread position:
               
284-689
               

               
Cow position:
               
chr13:23856064-23856468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 118
               

               
Conread position:
               
284-713
               

               
Cow position:
               
chr13:51901437-51901889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
284-713
               

               
Cow position:
               
chr13:60430226-60429802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 92
               

               
Conread position:
               
284-718
               

               
Cow position:
               
chr13:36771568-36771141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 72
               

               
Conread position:
               
284-718
               

               
Cow position:
               
chr13:37381654-37382092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 115
               

               
Conread position:
               
284-797
               

               
Cow position:
               
chr13:46181650-46182160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
532
               

               
Alignm identity:
               
376
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 115
               

               
Conread position:
               
285-495
               

               
Cow position:
               
chr13:48554222-48554438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
57, 15
               

               
Conread position:
               
285-514
               

               
Cow position:
               
chr13:19892378-19892146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
49, 71
               

               
Conread position:
               
285-533
               

               
Cow position:
               
chr13:55727756-55728002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
52, 119
               

               
Conread position:
               
285-584
               

               
Cow position:
               
chr13:49520969-49520675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
26, 129
               

               
Conread position:
               
285-618
               

               
Cow position:
               
chr13:5082505-5082832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
49, 72
               

               
Conread position:
               
285-644
               

               
Cow position:
               
chr13:9593370-9593711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 38
               

               
Conread position:
               
285-683
               

               
Cow position:
               
chr13:11096038-11096415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 13
               

               
Conread position:
               
285-745
               

               
Cow position:
               
chr13:12547054-12546597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 119
               

               
Conread position:
               
285-797
               

               
Cow position:
               
chr13:60973936-60974452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
536
               

               
Alignm identity:
               
384
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 13
               

               
Conread position:
               
286-478
               

               
Cow position:
               
chr13:17837806-17837997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
57, 22
               

               
Conread position:
               
286-660
               

               
Cow position:
               
chr13:24710634-24710257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
57, 112
               

               
Conread position:
               
287-477
               

               
Cow position:
               
chr13:9117709-9117524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
46, 107
               

               
Conread position:
               
287-512
               

               
Cow position:
               
chr13:17563596-17563816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
37, 116
               

               
Conread position:
               
287-661
               

               
Cow position:
               
chr13:13465908-13465569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
50, 26
               

               
Conread position:
               
287-699
               

               
Cow position:
               
chr13:56155295-56154898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
47, 95
               

               
Conread position:
               
287-718
               

               
Cow position:
               
chr13:8609691-8609270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 89
               

               
Conread position:
               
287-797
               

               
Cow position:
               
chr13:56148377-56148905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
543
               

               
Alignm identity:
               
374
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 164
               

               
Conread position:
               
287-797
               

               
Cow position:
               
chr13:56160590-56160062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
543
               

               
Alignm identity:
               
372
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 164
               

               
Conread position:
               
288-665
               

               
Cow position:
               
chr13:13176512-13176874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 25
               

               
Conread position:
               
288-714
               

               
Cow position:
               
chr13:20562850-20563276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 115
               

               
Conread position:
               
289-478
               

               
Cow position:
               
chr13:24110338-24110534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
49, 115
               

               
Conread position:
               
289-521
               

               
Cow position:
               
chr13:3211406-3211642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
5, 116
               

               
Conread position:
               
289-533
               

               
Cow position:
               
chr13:11591610-11591848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
48, 11
               

               
Conread position:
               
290-504
               

               
Cow position:
               
chr13:827105-827316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
47, 18
               

               
Conread position:
               
290-520
               

               
Cow position:
               
chr13:17110086-17110309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
47, 73
               

               
Conread position:
               
290-639
               

               
Cow position:
               
chr13:26369383-26369725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 76
               

               
Conread position:
               
290-710
               

               
Cow position:
               
chr13:52586179-52585749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 113
               

               
Conread position:
               
290-713
               

               
Cow position:
               
chr13:37484422-37483993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 114
               

               
Conread position:
               
291-623
               

               
Cow position:
               
chr13:11643799-11644116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 113
               

               
Conread position:
               
291-718
               

               
Cow position:
               
chr13:17613205-17613627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 108
               

               
Conread position:
               
292-575
               

               
Cow position:
               
chr13:39367820-39368103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
45, 159
               

               
Conread position:
               
292-628
               

               
Cow position:
               
chr13:547356-547676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
42, 107
               

               
Conread position:
               
293-473
               

               
Cow position:
               
chr13:6342226-6342045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
45, 88
               

               
Conread position:
               
293-586
               

               
Cow position:
               
chr13:20231328-20231045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
49, 104
               

               
Conread position:
               
294-474
               

               
Cow position:
               
chr13:51857023-51856842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
16, 109
               

               
Conread position:
               
295-558
               

               
Cow position:
               
chr13:8555329-8555584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
35, 60
               

               
Conread position:
               
298-667
               

               
Cow position:
               
chr13:54344648-54345004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
45, 21
               

               
Conread position:
               
298-688
               

               
Cow position:
               
chr13:5713182-5713546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
250, 53
               

               
Conread position:
               
298-689
               

               
Cow position:
               
chr13:52284684-52285068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 5
               

               
Conread position:
               
299-660
               

               
Cow position:
               
chr13:9644012-9643662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
266, 98
               

               
Conread position:
               
299-686
               

               
Cow position:
               
chr13:12202242-12202611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
80, 12
               

               
Conread position:
               
299-686
               

               
Cow position:
               
chr13:48037491-48037870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 83
               

               
Conread position:
               
299-702
               

               
Cow position:
               
chr13:43762037-43762439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 16
               

               
Conread position:
               
299-797
               

               
Cow position:
               
chr13:20650114-20649601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
529
               

               
Alignm identity:
               
387
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 103
               

               
Conread position:
               
300-534
               

               
Cow position:
               
chr13:43829113-43829343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
37, 117
               

               
Conread position:
               
301-694
               

               
Cow position:
               
chr13:11060857-11061243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 105
               

               
Conread position:
               
302-714
               

               
Cow position:
               
chr13:23270334-23269935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 81
               

               
Conread position:
               
303-685
               

               
Cow position:
               
chr13:12614125-12614509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 72
               

               
Conread position:
               
303-708
               

               
Cow position:
               
chr13:31813747-31814139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
16, 96
               

               
Conread position:
               
303-718
               

               
Cow position:
               
chr13:37981872-37981471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 75
               

               
Conread position:
               
304-478
               

               
Cow position:
               
chr13:37947078-37946902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
33, 87
               

               
Conread position:
               
305-534
               

               
Cow position:
               
chr13:25380846-25381064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
305-705
               

               
Cow position:
               
chr13:38278273-38277868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 18
               

               
Conread position:
               
306-512
               

               
Cow position:
               
chr13:19117619-19117836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
33, 73
               

               
Conread position:
               
306-644
               

               
Cow position:
               
chr13:62247012-62247335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
40, 90
               

               
Conread position:
               
307-635
               

               
Cow position:
               
chr13:8652567-8652242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 98
               

               
Conread position:
               
308-718
               

               
Cow position:
               
chr13:6153906-6153498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 15
               

               
Conread position:
               
312-713
               

               
Cow position:
               
chr13:21155605-21155214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 24
               

               
Conread position:
               
317-543
               

               
Cow position:
               
chr13:30263046-30262827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
213, 79
               

               
Conread position:
               
330-713
               

               
Cow position:
               
chr13:40651840-40652210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
267, 66
               

               
Conread position:
               
330-718
               

               
Cow position:
               
chr13:34941744-34941376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
269, 116
               

               
Conread position:
               
333-522
               

               
Cow position:
               
chr13:16187987-16187806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
333-540
               

               
Cow position:
               
chr13:60389579-60389378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
153, 64
               

               
Conread position:
               
333-581
               

               
Cow position:
               
chr13:62600916-62601159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
210, 61
               

               
Conread position:
               
333-596
               

               
Cow position:
               
chr13:52929620-52929874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
215, 58
               

               
Conread position:
               
333-667
               

               
Cow position:
               
chr13:6061099-6060781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
266, 64
               

               
Conread position:
               
333-667
               

               
Cow position:
               
chr13:8524709-8524394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
324, 64
               

               
Conread position:
               
333-684
               

               
Cow position:
               
chr13:8201574-8201237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
266, 55
               

               
Conread position:
               
333-684
               

               
Cow position:
               
chr13:15885113-15884766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
198, 62
               

               
Conread position:
               
333-689
               

               
Cow position:
               
chr13:11955208-11954864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
30, 64
               

               
Conread position:
               
333-689
               

               
Cow position:
               
chr13:52879311-52879663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
48, 117
               

               
Conread position:
               
333-706
               

               
Cow position:
               
chr13:18243771-18244125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
335, 64
               

               
Conread position:
               
333-713
               

               
Cow position:
               
chr13:17622197-17622561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
266, 65
               

               
Conread position:
               
333-713
               

               
Cow position:
               
chr13:25531881-25531513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
266, 62
               

               
Conread position:
               
334-600
               

               
Cow position:
               
chr13:38033587-38033856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
62, 114
               

               
Conread position:
               
334-718
               

               
Cow position:
               
chr13:19138350-19138718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 112
               

               
Conread position:
               
336-517
               

               
Cow position:
               
chr13:18005585-18005759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
92, 53
               

               
Conread position:
               
336-583
               

               
Cow position:
               
chr13:7488453-7488695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
202, 53
               

               
Conread position:
               
336-718
               

               
Cow position:
               
chr13:32950080-32949725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
220, 60
               

               
Conread position:
               
336-718
               

               
Cow position:
               
chr13:46324877-46324508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
319, 60
               

               
Conread position:
               
343-520
               

               
Cow position:
               
chr13:15964235-15964408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
108, 30
               

               
Conread position:
               
343-652
               

               
Cow position:
               
chr13:15529117-15528819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
18, 56
               

               
Conread position:
               
343-685
               

               
Cow position:
               
chr13:61166531-61166208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
221, 29
               

               
Conread position:
               
343-712
               

               
Cow position:
               
chr13:13306015-13306382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 21
               

               
Conread position:
               
343-718
               

               
Cow position:
               
chr13:6835876-6835528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
21, 31
               

               
Conread position:
               
349-713
               

               
Cow position:
               
chr13:21039674-21039326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
145, 27
               

               
Conread position:
               
349-784
               

               
Cow position:
               
chr13:29630781-29631189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
200, 44
               

               
Conread position:
               
351-678
               

               
Cow position:
               
chr13:53536381-53536064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
105, 45
               

               
Conread position:
               
351-703
               

               
Cow position:
               
chr13:29814466-29814805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
119, 20
               

               
Conread position:
               
352-660
               

               
Cow position:
               
chr13:41253549-41253835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
194, 45
               

               
Conread position:
               
352-679
               

               
Cow position:
               
chr13:24376421-24376733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
247, 43
               

               
Conread position:
               
357-718
               

               
Cow position:
               
chr13:19178206-19178554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 5
               

               
Conread position:
               
359-586
               

               
Cow position:
               
chr13:20128601-20128824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
150, 39
               

               
Conread position:
               
359-667
               

               
Cow position:
               
chr13:2463300-2463004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
189, 38
               

               
Conread position:
               
359-718
               

               
Cow position:
               
chr13:16269873-16270216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
197, 14
               

               
Conread position:
               
360-667
               

               
Cow position:
               
chr13:16024525-16024815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
360-797
               

               
Cow position:
               
chr13:4420278-4420697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
188, 37
               

               
Conread position:
               
362-518
               

               
Cow position:
               
chr13:10040602-10040447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
74, 35
               

               
Conread position:
               
362-713
               

               
Cow position:
               
chr13:60436936-60436606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
237, 25
               

               
Conread position:
               
366-698
               

               
Cow position:
               
chr13:19426758-19426436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
114, 77
               

               
Conread position:
               
368-688
               

               
Cow position:
               
chr13:33517979-33517672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 15
               

               
Conread position:
               
370-572
               

               
Cow position:
               
chr13:14870478-14870674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
156, 27
               

               
Conread position:
               
372-533
               

               
Cow position:
               
chr13:32826510-32826353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
372-667
               

               
Cow position:
               
chr13:1779777-1780060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
137, 15
               

               
Conread position:
               
372-713
               

               
Cow position:
               
chr13:37517193-37516857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 74
               

               
Conread position:
               
373-686
               

               
Cow position:
               
chr13:5658777-5658481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
296, 23
               

               
Conread position:
               
375-713
               

               
Cow position:
               
chr13:6759846-6759513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
174, 13
               

               
Conread position:
               
375-797
               

               
Cow position:
               
chr13:20682900-20683311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
293, 21
               

               
Conread position:
               
376-712
               

               
Cow position:
               
chr13:36345926-36346264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
125, 28
               

               
Conread position:
               
378-583
               

               
Cow position:
               
chr13:7789960-7790170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
68, 13
               

               
Conread position:
               
385-575
               

               
Cow position:
               
chr13:53070206-53070022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
161, 23
               

               
Conread position:
               
386-667
               

               
Cow position:
               
chr13:18551409-18551675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
213, 28
               

               
Conread position:
               
386-792
               

               
Cow position:
               
chr13:16834115-16833725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
96, 58
               

               
Conread position:
               
387-714
               

               
Cow position:
               
chr13:12682585-12682265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
206, 75
               

               
Conread position:
               
388-718
               

               
Cow position:
               
chr13:3003391-3003725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
52, 149
               

               
Conread position:
               
390-531
               

               
Cow position:
               
chr13:16711591-16711727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
390-722
               

               
Cow position:
               
chr13:61170754-61170438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
208, 53
               

               
Conread position:
               
393-539
               

               
Cow position:
               
chr13:24066140-24065997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
127, 54
               

               
Conread position:
               
394-536
               

               
Cow position:
               
chr13:322817-322678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
394-710
               

               
Cow position:
               
chr13:52178076-52178372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
275, 44
               

               
Conread position:
               
395-597
               

               
Cow position:
               
chr13:20853918-20853722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
34, 65
               

               
Conread position:
               
395-648
               

               
Cow position:
               
chr13:11147272-11147514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
72, 49
               

               
Conread position:
               
395-661
               

               
Cow position:
               
chr13:20042001-20041740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
153, 41
               

               
Conread position:
               
395-667
               

               
Cow position:
               
chr13:54093714-54093967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
395-689
               

               
Cow position:
               
chr13:25261843-25261552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
204, 57
               

               
Conread position:
               
395-718
               

               
Cow position:
               
chr13:1011300-1011613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
137, 54
               

               
Conread position:
               
395-721
               

               
Cow position:
               
chr13:5091700-5091377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
204, 23
               

               
Conread position:
               
395-787
               

               
Cow position:
               
chr13:41155065-41154696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
215, 54
               

               
Conread position:
               
397-527
               

               
Cow position:
               
chr13:13809592-13809464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
397-663
               

               
Cow position:
               
chr13:6975824-6975567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
151, 83
               

               
Conread position:
               
397-713
               

               
Cow position:
               
chr13:25249189-25248867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 54
               

               
Conread position:
               
398-535
               

               
Cow position:
               
chr13:37977511-37977372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
41, 30
               

               
Conread position:
               
398-718
               

               
Cow position:
               
chr13:13265778-13266082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
271, 51
               

               
Conread position:
               
399-523
               

               
Cow position:
               
chr13:16163848-16163971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
399-713
               

               
Cow position:
               
chr13:5752455-5752146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
104, 44
               

               
Conread position:
               
400-658
               

               
Cow position:
               
chr13:51108465-51108710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
199, 44
               

               
Conread position:
               
401-713
               

               
Cow position:
               
chr13:37946231-37945943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
147, 26
               

               
Conread position:
               
402-525
               

               
Cow position:
               
chr13:1338978-1339098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
402-562
               

               
Cow position:
               
chr13:6113328-6113174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
402-713
               

               
Cow position:
               
chr13:3701414-3701709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
197, 31
               

               
Conread position:
               
403-521
               

               
Cow position:
               
chr13:4866994-4866873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
122
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
403-606
               

               
Cow position:
               
chr13:18941853-18942051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
190, 41
               

               
Conread position:
               
403-665
               

               
Cow position:
               
chr13:20531172-20530918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
196, 48
               

               
Conread position:
               
404-541
               

               
Cow position:
               
chr13:55947753-55947883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
404-718
               

               
Cow position:
               
chr13:563165-562856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
142, 43
               

               
Conread position:
               
405-713
               

               
Cow position:
               
chr13:37980666-37980374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 127
               

               
Conread position:
               
405-721
               

               
Cow position:
               
chr13:20864037-20863736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
195, 46
               

               
Conread position:
               
407-540
               

               
Cow position:
               
chr13:54507724-54507594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
407-664
               

               
Cow position:
               
chr13:43812067-43812307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
192, 25
               

               
Conread position:
               
407-664
               

               
Cow position:
               
chr13:43839562-43839322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
157, 25
               

               
Conread position:
               
407-667
               

               
Cow position:
               
chr13:9884748-9884995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
192, 40
               

               
Conread position:
               
408-678
               

               
Cow position:
               
chr13:20536485-20536739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
264, 17
               

               
Conread position:
               
408-716
               

               
Cow position:
               
chr13:5175543-5175849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
14, 25
               

               
Conread position:
               
409-797
               

               
Cow position:
               
chr13:54237336-54237724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
277, 40
               

               
Conread position:
               
413-713
               

               
Cow position:
               
chr13:7257383-7257678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
186, 29
               

               
Conread position:
               
414-797
               

               
Cow position:
               
chr13:14544104-14544498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 33
               

               
Conread position:
               
419-676
               

               
Cow position:
               
chr13:2339429-2339669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
174, 24
               

               
Conread position:
               
420-713
               

               
Cow position:
               
chr13:9125658-9125950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
129, 27
               

               
Conread position:
               
422-680
               

               
Cow position:
               
chr13:21904659-21904903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
240, 23
               

               
Conread position:
               
425-667
               

               
Cow position:
               
chr13:11947744-11947501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
72, 103
               

               
Conread position:
               
427-679
               

               
Cow position:
               
chr13:24776285-24776534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
123, 16
               

               
Conread position:
               
435-686
               

               
Cow position:
               
chr13:46458626-46458868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
17, 75
               

               
Conread position:
               
438-559
               

               
Cow position:
               
chr13:56275266-56275148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
123
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
110, 11
               

               
Conread position:
               
438-559
               

               
Cow position:
               
chr13:56276247-56276367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
123
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
110, 11
               

               
Conread position:
               
440-713
               

               
Cow position:
               
chr13:36949162-36948893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
159, 45
               

               
Conread position:
               
445-709
               

               
Cow position:
               
chr13:6607008-6606747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
154, 75
               

               
Conread position:
               
449-718
               

               
Cow position:
               
chr13:60690708-60690438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 80
               

               
Conread position:
               
451-673
               

               
Cow position:
               
chr13:17815789-17816005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
148, 79
               

               
Conread position:
               
451-702
               

               
Cow position:
               
chr13:55295602-55295360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
217, 78
               

               
Conread position:
               
453-697
               

               
Cow position:
               
chr13:54381914-54381674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
146, 76
               

               
Conread position:
               
454-714
               

               
Cow position:
               
chr13:15740088-15740341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
136, 13
               

               
Conread position:
               
458-783
               

               
Cow position:
               
chr13:24539519-24539841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
91, 53
               

               
Conread position:
               
458-795
               

               
Cow position:
               
chr13:34556309-34555963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
120, 71
               

               
Conread position:
               
458-796
               

               
Cow position:
               
chr13:27027747-27027392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
106, 67
               

               
Conread position:
               
459-718
               

               
Cow position:
               
chr13:17993958-17994214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
134, 49
               

               
Conread position:
               
464-684
               

               
Cow position:
               
chr13:22025675-22025457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
135, 65
               

               
Conread position:
               
485-713
               

               
Cow position:
               
chr13:14927290-14927514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
114, 44
               

               
Conread position:
               
485-783
               

               
Cow position:
               
chr13:53308539-53308833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
59, 93
               

               
Conread position:
               
492-670
               

               
Cow position:
               
chr13:33054334-33054165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
81, 34
               

               
Conread position:
               
492-709
               

               
Cow position:
               
chr13:51856583-51856364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
16, 8
               

               
Conread position:
               
561-797
               

               
Cow position:
               
chr13:11202382-11202609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
110, 27
               

               
Conread position:
               
584-792
               

               
Cow position:
               
chr13:36352828-36352607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
10, 75
               
Show alignments to all cow chromosomes.