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Cow genome map

           
Conread name:
           
LyN1-MLN01F030047
        

               
Conread position:
               
188-374
               

               
Cow position:
               
chr14:25912470-25912658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
149, 19
               

               
Conread position:
               
202-527
               

               
Cow position:
               
chr14:26222563-26222898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 5
               

               
Conread position:
               
202-686
               

               
Cow position:
               
chr14:23090556-23090070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
505
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
17, 203
               

               
Conread position:
               
202-693
               

               
Cow position:
               
chr14:45052266-45052753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
510
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 21
               

               
Conread position:
               
204-504
               

               
Cow position:
               
chr14:50499488-50499197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
96, 49
               

               
Conread position:
               
204-525
               

               
Cow position:
               
chr14:41253149-41252837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
251, 12
               

               
Conread position:
               
204-682
               

               
Cow position:
               
chr14:21357386-21357856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
370
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 179
               

               
Conread position:
               
205-473
               

               
Cow position:
               
chr14:47170522-47170254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
15, 85
               

               
Conread position:
               
206-713
               

               
Cow position:
               
chr14:42596225-42596712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
523
               

               
Alignm identity:
               
365
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 138
               

               
Conread position:
               
208-390
               

               
Cow position:
               
chr14:27652994-27653187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
208-394
               

               
Cow position:
               
chr14:20736445-20736638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
12, 54
               

               
Conread position:
               
208-398
               

               
Cow position:
               
chr14:28465385-28465183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
208-414
               

               
Cow position:
               
chr14:19832560-19832344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
82, 44
               

               
Conread position:
               
208-422
               

               
Cow position:
               
chr14:24732067-24732290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
70, 63
               

               
Conread position:
               
208-525
               

               
Cow position:
               
chr14:12954542-12954231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 74
               

               
Conread position:
               
208-533
               

               
Cow position:
               
chr14:23442859-23443178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
129, 73
               

               
Conread position:
               
208-534
               

               
Cow position:
               
chr14:49817852-49817540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
85, 15
               

               
Conread position:
               
208-629
               

               
Cow position:
               
chr14:11846330-11846748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
87, 194
               

               
Conread position:
               
208-651
               

               
Cow position:
               
chr14:8786706-8786280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 88
               

               
Conread position:
               
208-688
               

               
Cow position:
               
chr14:19852103-19851610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 174
               

               
Conread position:
               
208-709
               

               
Cow position:
               
chr14:14622335-14621855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
519
               

               
Alignm identity:
               
380
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 77
               

               
Conread position:
               
208-718
               

               
Cow position:
               
chr14:13385199-13385712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
529
               

               
Alignm identity:
               
374
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 107
               

               
Conread position:
               
208-797
               

               
Cow position:
               
chr14:38144277-38143689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
613
               

               
Alignm identity:
               
457
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 198
               

               
Conread position:
               
209-300
               

               
Cow position:
               
chr14:11750258-11750167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
92
               

               
Alignm identity:
               
78
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
209-334
               

               
Cow position:
               
chr14:10721868-10721746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
209-338
               

               
Cow position:
               
chr14:5044510-5044635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
209-338
               

               
Cow position:
               
chr14:21968675-21968545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
209-340
               

               
Cow position:
               
chr14:37236207-37236336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
81, 19
               

               
Conread position:
               
209-374
               

               
Cow position:
               
chr14:8591011-8590841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
128, 83
               

               
Conread position:
               
209-380
               

               
Cow position:
               
chr14:32784284-32784102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
209-390
               

               
Cow position:
               
chr14:41267889-41267709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
128, 79
               

               
Conread position:
               
209-391
               

               
Cow position:
               
chr14:46490634-46490440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
80, 42
               

               
Conread position:
               
209-404
               

               
Cow position:
               
chr14:33328800-33328997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
128, 14
               

               
Conread position:
               
209-405
               

               
Cow position:
               
chr14:24597945-24597740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
86, 194
               

               
Conread position:
               
209-406
               

               
Cow position:
               
chr14:4491268-4491473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
47, 89
               

               
Conread position:
               
209-410
               

               
Cow position:
               
chr14:8083030-8083240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
89, 106
               

               
Conread position:
               
209-419
               

               
Cow position:
               
chr14:44615317-44615098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
86, 194
               

               
Conread position:
               
209-420
               

               
Cow position:
               
chr14:7019951-7019734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
84, 12
               

               
Conread position:
               
209-422
               

               
Cow position:
               
chr14:27364411-27364631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
80, 171
               

               
Conread position:
               
209-435
               

               
Cow position:
               
chr14:5959159-5958921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
89, 197
               

               
Conread position:
               
209-437
               

               
Cow position:
               
chr14:26918827-26919065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
83, 185
               

               
Conread position:
               
209-439
               

               
Cow position:
               
chr14:4848182-4848417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
11, 38
               

               
Conread position:
               
209-439
               

               
Cow position:
               
chr14:18559224-18558991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
9, 82
               

               
Conread position:
               
209-441
               

               
Cow position:
               
chr14:15428313-15428550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 14
               

               
Conread position:
               
209-460
               

               
Cow position:
               
chr14:49940847-49941100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
121, 91
               

               
Conread position:
               
209-472
               

               
Cow position:
               
chr14:7198329-7198601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
86, 197
               

               
Conread position:
               
209-473
               

               
Cow position:
               
chr14:48900000-48900276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
8, 43
               

               
Conread position:
               
209-477
               

               
Cow position:
               
chr14:7636665-7636391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
100, 63
               

               
Conread position:
               
209-477
               

               
Cow position:
               
chr14:8923753-8923479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 46
               

               
Conread position:
               
209-477
               

               
Cow position:
               
chr14:41838025-41837768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
209-478
               

               
Cow position:
               
chr14:43192697-43192943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
13, 42
               

               
Conread position:
               
209-498
               

               
Cow position:
               
chr14:27504404-27504106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
74, 117
               

               
Conread position:
               
209-508
               

               
Cow position:
               
chr14:33229566-33229261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
93, 152
               

               
Conread position:
               
209-524
               

               
Cow position:
               
chr14:37422939-37422637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
138, 79
               

               
Conread position:
               
209-525
               

               
Cow position:
               
chr14:7036526-7036203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 198
               

               
Conread position:
               
209-526
               

               
Cow position:
               
chr14:16550160-16549851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
134, 40
               

               
Conread position:
               
209-526
               

               
Cow position:
               
chr14:20954517-20954839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
98, 21
               

               
Conread position:
               
209-527
               

               
Cow position:
               
chr14:44084642-44084324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
227, 113
               

               
Conread position:
               
209-532
               

               
Cow position:
               
chr14:19321676-19321348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
75, 216
               

               
Conread position:
               
209-532
               

               
Cow position:
               
chr14:36289956-36289642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 21
               

               
Conread position:
               
209-534
               

               
Cow position:
               
chr14:12512058-12511741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 89
               

               
Conread position:
               
209-535
               

               
Cow position:
               
chr14:7799752-7800076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
132, 14
               

               
Conread position:
               
209-535
               

               
Cow position:
               
chr14:33457211-33456880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 104
               

               
Conread position:
               
209-538
               

               
Cow position:
               
chr14:45045430-45045766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 197
               

               
Conread position:
               
209-556
               

               
Cow position:
               
chr14:15931707-15932058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
86, 194
               

               
Conread position:
               
209-582
               

               
Cow position:
               
chr14:15997917-15997555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
337, 77
               

               
Conread position:
               
209-584
               

               
Cow position:
               
chr14:23411022-23410644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
37, 246
               

               
Conread position:
               
209-588
               

               
Cow position:
               
chr14:2975251-2974878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 14
               

               
Conread position:
               
209-623
               

               
Cow position:
               
chr14:20110888-20110479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 191
               

               
Conread position:
               
209-626
               

               
Cow position:
               
chr14:13042593-13043005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
101, 77
               

               
Conread position:
               
209-646
               

               
Cow position:
               
chr14:12036995-12036578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
77, 137
               

               
Conread position:
               
209-661
               

               
Cow position:
               
chr14:32452085-32452535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 76
               

               
Conread position:
               
209-663
               

               
Cow position:
               
chr14:12961432-12961849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
128, 78
               

               
Conread position:
               
209-679
               

               
Cow position:
               
chr14:8541373-8540915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 79
               

               
Conread position:
               
209-686
               

               
Cow position:
               
chr14:23682101-23682571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
98, 190
               

               
Conread position:
               
209-686
               

               
Cow position:
               
chr14:41210699-41211165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 21
               

               
Conread position:
               
209-689
               

               
Cow position:
               
chr14:23107172-23107635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
50, 32
               

               
Conread position:
               
209-701
               

               
Cow position:
               
chr14:41472144-41471647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
514
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
15, 200
               

               
Conread position:
               
209-713
               

               
Cow position:
               
chr14:26115893-26116398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
521
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 14
               

               
Conread position:
               
209-713
               

               
Cow position:
               
chr14:42155133-42154626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
524
               

               
Alignm identity:
               
367
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 81
               

               
Conread position:
               
209-718
               

               
Cow position:
               
chr14:36555296-36554817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
515
               

               
Alignm identity:
               
385
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
129, 63
               

               
Conread position:
               
209-719
               

               
Cow position:
               
chr14:19206698-19207204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
533
               

               
Alignm identity:
               
363
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 204
               

               
Conread position:
               
209-745
               

               
Cow position:
               
chr14:13006358-13006868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
545
               

               
Alignm identity:
               
403
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 128
               

               
Conread position:
               
209-782
               

               
Cow position:
               
chr14:50589556-50588978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
602
               

               
Alignm identity:
               
414
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
150, 41
               

               
Conread position:
               
209-792
               

               
Cow position:
               
chr14:41749921-41749331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
617
               

               
Alignm identity:
               
404
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
128, 14
               

               
Conread position:
               
210-299
               

               
Cow position:
               
chr14:36538041-36537953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
90
               

               
Alignm identity:
               
78
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
210-309
               

               
Cow position:
               
chr14:23695301-23695398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
100
               

               
Alignm identity:
               
84
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
210-318
               

               
Cow position:
               
chr14:23100448-23100559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
113
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
84, 24
               

               
Conread position:
               
210-318
               

               
Cow position:
               
chr14:38411140-38411246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
109
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
210-318
               

               
Cow position:
               
chr14:42080081-42079969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
113
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
210-321
               

               
Cow position:
               
chr14:18717146-18717255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
112
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
210-338
               

               
Cow position:
               
chr14:6389048-6388921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
210-370
               

               
Cow position:
               
chr14:37504347-37504518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
210-373
               

               
Cow position:
               
chr14:36151158-36151331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
210-377
               

               
Cow position:
               
chr14:11981299-11981477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
210-386
               

               
Cow position:
               
chr14:21593166-21592984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
127, 26
               

               
Conread position:
               
210-388
               

               
Cow position:
               
chr14:20010673-20010484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
210-388
               

               
Cow position:
               
chr14:30023365-30023176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
210-391
               

               
Cow position:
               
chr14:25284827-25285022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
21, 40
               

               
Conread position:
               
210-394
               

               
Cow position:
               
chr14:18270195-18270388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
210-406
               

               
Cow position:
               
chr14:22202295-22202091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
210-406
               

               
Cow position:
               
chr14:34210779-34210577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
59, 168
               

               
Conread position:
               
210-406
               

               
Cow position:
               
chr14:35421252-35421045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
39, 196
               

               
Conread position:
               
210-408
               

               
Cow position:
               
chr14:145675-145472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
39, 15
               

               
Conread position:
               
210-409
               

               
Cow position:
               
chr14:18412759-18412551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
88, 189
               

               
Conread position:
               
210-412
               

               
Cow position:
               
chr14:30450467-30450675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
85, 15
               

               
Conread position:
               
210-413
               

               
Cow position:
               
chr14:24754785-24755002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
40, 180
               

               
Conread position:
               
210-414
               

               
Cow position:
               
chr14:13516157-13515947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
85, 162
               

               
Conread position:
               
210-416
               

               
Cow position:
               
chr14:47893948-47894162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
78, 191
               

               
Conread position:
               
210-417
               

               
Cow position:
               
chr14:4664615-4664833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
75, 195
               

               
Conread position:
               
210-418
               

               
Cow position:
               
chr14:28957722-28957939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
85, 199
               

               
Conread position:
               
210-424
               

               
Cow position:
               
chr14:6965594-6965817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
85, 193
               

               
Conread position:
               
210-424
               

               
Cow position:
               
chr14:24744769-24744993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
84, 202
               

               
Conread position:
               
210-424
               

               
Cow position:
               
chr14:35065521-35065744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
84, 193
               

               
Conread position:
               
210-424
               

               
Cow position:
               
chr14:45955123-45955336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
32, 13
               

               
Conread position:
               
210-424
               

               
Cow position:
               
chr14:48884993-48884779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
34, 135
               

               
Conread position:
               
210-436
               

               
Cow position:
               
chr14:17058424-17058658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
88, 192
               

               
Conread position:
               
210-436
               

               
Cow position:
               
chr14:50379693-50379906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
210-439
               

               
Cow position:
               
chr14:6637394-6637155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
104, 0
               

               
Conread position:
               
210-440
               

               
Cow position:
               
chr14:28245033-28244795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
74, 173
               

               
Conread position:
               
210-440
               

               
Cow position:
               
chr14:33578243-33578006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
85, 189
               

               
Conread position:
               
210-440
               

               
Cow position:
               
chr14:40191430-40191656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
130, 24
               

               
Conread position:
               
210-441
               

               
Cow position:
               
chr14:13731261-13731026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
124, 11
               

               
Conread position:
               
210-441
               

               
Cow position:
               
chr14:13822561-13822805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
74, 199
               

               
Conread position:
               
210-442
               

               
Cow position:
               
chr14:2173398-2173635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
69, 20
               

               
Conread position:
               
210-442
               

               
Cow position:
               
chr14:15423926-15424167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
84, 193
               

               
Conread position:
               
210-442
               

               
Cow position:
               
chr14:22645690-22645450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
85, 37
               

               
Conread position:
               
210-442
               

               
Cow position:
               
chr14:37446839-37446598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
71, 196
               

               
Conread position:
               
210-443
               

               
Cow position:
               
chr14:27884850-27885092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
100, 194
               

               
Conread position:
               
210-445
               

               
Cow position:
               
chr14:27999204-27998960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
88, 193
               

               
Conread position:
               
210-446
               

               
Cow position:
               
chr14:10387493-10387736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
85, 110
               

               
Conread position:
               
210-446
               

               
Cow position:
               
chr14:20984171-20984415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
88, 192
               

               
Conread position:
               
210-446
               

               
Cow position:
               
chr14:37106438-37106680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
85, 43
               

               
Conread position:
               
210-448
               

               
Cow position:
               
chr14:39414993-39415241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
74, 193
               

               
Conread position:
               
210-452
               

               
Cow position:
               
chr14:14812388-14812136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
82, 193
               

               
Conread position:
               
210-456
               

               
Cow position:
               
chr14:19592287-19592545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
32, 20
               

               
Conread position:
               
210-459
               

               
Cow position:
               
chr14:6898907-6899161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
84, 198
               

               
Conread position:
               
210-472
               

               
Cow position:
               
chr14:6864833-6865103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
94, 192
               

               
Conread position:
               
210-472
               

               
Cow position:
               
chr14:21305608-21305879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
94, 194
               

               
Conread position:
               
210-472
               

               
Cow position:
               
chr14:33546524-33546255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
88, 193
               

               
Conread position:
               
210-475
               

               
Cow position:
               
chr14:44713251-44713518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
88, 193
               

               
Conread position:
               
210-476
               

               
Cow position:
               
chr14:17475732-17475452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
210-476
               

               
Cow position:
               
chr14:39452045-39452311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
82, 178
               

               
Conread position:
               
210-477
               

               
Cow position:
               
chr14:17335521-17335242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
34, 193
               

               
Conread position:
               
210-483
               

               
Cow position:
               
chr14:24527328-24527051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
88, 192
               

               
Conread position:
               
210-488
               

               
Cow position:
               
chr14:4047581-4047865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
98, 184
               

               
Conread position:
               
210-488
               

               
Cow position:
               
chr14:49713815-49714094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
122, 100
               

               
Conread position:
               
210-498
               

               
Cow position:
               
chr14:4282676-4282383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
11, 45
               

               
Conread position:
               
210-500
               

               
Cow position:
               
chr14:38550646-38550356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
94, 190
               

               
Conread position:
               
210-508
               

               
Cow position:
               
chr14:41706430-41706144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
72, 192
               

               
Conread position:
               
210-513
               

               
Cow position:
               
chr14:7621297-7620994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
99, 199
               

               
Conread position:
               
210-521
               

               
Cow position:
               
chr14:12855959-12855645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
24, 190
               

               
Conread position:
               
210-533
               

               
Cow position:
               
chr14:23424100-23424417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 71
               

               
Conread position:
               
210-533
               

               
Cow position:
               
chr14:27823267-27823593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 39
               

               
Conread position:
               
210-533
               

               
Cow position:
               
chr14:41966060-41966400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
63, 259
               

               
Conread position:
               
210-536
               

               
Cow position:
               
chr14:40329274-40329604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 195
               

               
Conread position:
               
210-536
               

               
Cow position:
               
chr14:47276866-47276544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
65, 191
               

               
Conread position:
               
210-540
               

               
Cow position:
               
chr14:29809127-29809468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
82, 191
               

               
Conread position:
               
210-576
               

               
Cow position:
               
chr14:12343007-12342613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 147
               

               
Conread position:
               
210-600
               

               
Cow position:
               
chr14:5235044-5234651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
131, 60
               

               
Conread position:
               
210-644
               

               
Cow position:
               
chr14:14979873-14979441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
39, 86
               

               
Conread position:
               
210-646
               

               
Cow position:
               
chr14:13845829-13846250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
124, 32
               

               
Conread position:
               
210-647
               

               
Cow position:
               
chr14:50040088-50040506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
153, 91
               

               
Conread position:
               
210-660
               

               
Cow position:
               
chr14:3868597-3868152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 194
               

               
Conread position:
               
210-660
               

               
Cow position:
               
chr14:10858277-10858710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 11
               

               
Conread position:
               
210-663
               

               
Cow position:
               
chr14:11043659-11043208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 193
               

               
Conread position:
               
210-667
               

               
Cow position:
               
chr14:4227388-4226910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 62
               

               
Conread position:
               
210-667
               

               
Cow position:
               
chr14:25386034-25385607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
9, 71
               

               
Conread position:
               
210-667
               

               
Cow position:
               
chr14:49929910-49929450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 31
               

               
Conread position:
               
210-669
               

               
Cow position:
               
chr14:24921933-24922393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 166
               

               
Conread position:
               
210-685
               

               
Cow position:
               
chr14:15518568-15518072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
506
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 219
               

               
Conread position:
               
210-686
               

               
Cow position:
               
chr14:13809789-13810242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
410, 78
               

               
Conread position:
               
210-689
               

               
Cow position:
               
chr14:19851193-19850721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 195
               

               
Conread position:
               
210-700
               

               
Cow position:
               
chr14:7290634-7291117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
506
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 191
               

               
Conread position:
               
210-701
               

               
Cow position:
               
chr14:9019876-9020349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
498
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 71
               

               
Conread position:
               
210-702
               

               
Cow position:
               
chr14:24236658-24237142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
507
               

               
Alignm identity:
               
367
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 15
               

               
Conread position:
               
210-709
               

               
Cow position:
               
chr14:20640794-20640290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
517
               

               
Alignm identity:
               
368
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 182
               

               
Conread position:
               
210-710
               

               
Cow position:
               
chr14:20016875-20016375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
517
               

               
Alignm identity:
               
376
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 190
               

               
Conread position:
               
210-712
               

               
Cow position:
               
chr14:25681754-25682279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
532
               

               
Alignm identity:
               
372
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 20
               

               
Conread position:
               
210-713
               

               
Cow position:
               
chr14:6600117-6599618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
514
               

               
Alignm identity:
               
369
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 185
               

               
Conread position:
               
210-713
               

               
Cow position:
               
chr14:35381424-35381923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
521
               

               
Alignm identity:
               
394
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 169
               

               
Conread position:
               
210-713
               

               
Cow position:
               
chr14:36437654-36437149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
523
               

               
Alignm identity:
               
376
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 193
               

               
Conread position:
               
210-713
               

               
Cow position:
               
chr14:47584825-47584314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
526
               

               
Alignm identity:
               
361
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 43
               

               
Conread position:
               
210-717
               

               
Cow position:
               
chr14:21201985-21201491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
519
               

               
Alignm identity:
               
360
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 190
               

               
Conread position:
               
210-718
               

               
Cow position:
               
chr14:11508403-11507903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
527
               

               
Alignm identity:
               
362
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 202
               

               
Conread position:
               
210-718
               

               
Cow position:
               
chr14:20712847-20712343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
521
               

               
Alignm identity:
               
380
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
134, 73
               

               
Conread position:
               
210-718
               

               
Cow position:
               
chr14:35420927-35420421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
524
               

               
Alignm identity:
               
389
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 67
               

               
Conread position:
               
210-718
               

               
Cow position:
               
chr14:38548627-38549140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
528
               

               
Alignm identity:
               
363
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 137
               

               
Conread position:
               
210-718
               

               
Cow position:
               
chr14:40230800-40230298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
524
               

               
Alignm identity:
               
393
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 42
               

               
Conread position:
               
210-718
               

               
Cow position:
               
chr14:48492964-48492446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
528
               

               
Alignm identity:
               
359
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 229
               

               
Conread position:
               
210-722
               

               
Cow position:
               
chr14:31130542-31130045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
527
               

               
Alignm identity:
               
373
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 205
               

               
Conread position:
               
210-796
               

               
Cow position:
               
chr14:26859902-26859304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
609
               

               
Alignm identity:
               
385
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
88, 193
               

               
Conread position:
               
210-797
               

               
Cow position:
               
chr14:18485420-18484818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
617
               

               
Alignm identity:
               
432
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 162
               

               
Conread position:
               
210-797
               

               
Cow position:
               
chr14:47609749-47609161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
613
               

               
Alignm identity:
               
399
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
84, 192
               

               
Conread position:
               
211-296
               

               
Cow position:
               
chr14:4209293-4209378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
86
               

               
Alignm identity:
               
75
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
211-317
               

               
Cow position:
               
chr14:28306367-28306473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
107
               

               
Alignm identity:
               
88
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
211-335
               

               
Cow position:
               
chr14:25889930-25890056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
29, 83
               

               
Conread position:
               
211-338
               

               
Cow position:
               
chr14:21946231-21946356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
30, 88
               

               
Conread position:
               
211-338
               

               
Cow position:
               
chr14:36723243-36723374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
211-340
               

               
Cow position:
               
chr14:25517111-25516979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
87, 109
               

               
Conread position:
               
211-344
               

               
Cow position:
               
chr14:14393719-14393852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
87, 27
               

               
Conread position:
               
211-380
               

               
Cow position:
               
chr14:35509040-35509196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
211-405
               

               
Cow position:
               
chr14:6234387-6234184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
81, 195
               

               
Conread position:
               
211-418
               

               
Cow position:
               
chr14:15211770-15211975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
126, 87
               

               
Conread position:
               
211-440
               

               
Cow position:
               
chr14:437636-437399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
92, 38
               

               
Conread position:
               
211-440
               

               
Cow position:
               
chr14:10693421-10693186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
87, 174
               

               
Conread position:
               
211-440
               

               
Cow position:
               
chr14:36425567-36425340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
126, 12
               

               
Conread position:
               
211-441
               

               
Cow position:
               
chr14:26825024-26825263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
81, 192
               

               
Conread position:
               
211-443
               

               
Cow position:
               
chr14:10937506-10937753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
211-450
               

               
Cow position:
               
chr14:23078955-23078712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 12
               

               
Conread position:
               
211-470
               

               
Cow position:
               
chr14:21371948-21371684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
78, 243
               

               
Conread position:
               
211-473
               

               
Cow position:
               
chr14:29723740-29723491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
125, 74
               

               
Conread position:
               
211-478
               

               
Cow position:
               
chr14:40208744-40209005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
80, 54
               

               
Conread position:
               
211-483
               

               
Cow position:
               
chr14:12146646-12146369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
12, 191
               

               
Conread position:
               
211-505
               

               
Cow position:
               
chr14:15944831-15944536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
77, 136
               

               
Conread position:
               
211-514
               

               
Cow position:
               
chr14:12635040-12634748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 12
               

               
Conread position:
               
211-523
               

               
Cow position:
               
chr14:5025113-5025432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
12, 190
               

               
Conread position:
               
211-523
               

               
Cow position:
               
chr14:11470315-11469998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 105
               

               
Conread position:
               
211-533
               

               
Cow position:
               
chr14:48838426-48838755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
11, 136
               

               
Conread position:
               
211-537
               

               
Cow position:
               
chr14:27338174-27338505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 193
               

               
Conread position:
               
211-540
               

               
Cow position:
               
chr14:40486808-40486487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
20, 189
               

               
Conread position:
               
211-629
               

               
Cow position:
               
chr14:12667565-12667979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 42
               

               
Conread position:
               
211-640
               

               
Cow position:
               
chr14:24387287-24387709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 38
               

               
Conread position:
               
211-667
               

               
Cow position:
               
chr14:35498658-35498216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 51
               

               
Conread position:
               
211-667
               

               
Cow position:
               
chr14:37679148-37678713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
89, 67
               

               
Conread position:
               
211-667
               

               
Cow position:
               
chr14:48741031-48740601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 35
               

               
Conread position:
               
211-687
               

               
Cow position:
               
chr14:6541890-6541419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 12
               

               
Conread position:
               
211-688
               

               
Cow position:
               
chr14:26108488-26108950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
355, 63
               

               
Conread position:
               
211-708
               

               
Cow position:
               
chr14:38920792-38921267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
516
               

               
Alignm identity:
               
368
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 35
               

               
Conread position:
               
211-713
               

               
Cow position:
               
chr14:6490867-6490367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
527
               

               
Alignm identity:
               
382
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 197
               

               
Conread position:
               
211-713
               

               
Cow position:
               
chr14:12244545-12244051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
510
               

               
Alignm identity:
               
370
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 12
               

               
Conread position:
               
211-713
               

               
Cow position:
               
chr14:28378194-28378696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
520
               

               
Alignm identity:
               
391
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 14
               

               
Conread position:
               
211-713
               

               
Cow position:
               
chr14:41809818-41809317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
517
               

               
Alignm identity:
               
371
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 27
               

               
Conread position:
               
211-718
               

               
Cow position:
               
chr14:44237891-44237361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
539
               

               
Alignm identity:
               
369
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 190
               

               
Conread position:
               
211-718
               

               
Cow position:
               
chr14:47506954-47507443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
522
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
68, 134
               

               
Conread position:
               
212-307
               

               
Cow position:
               
chr14:44464994-44464899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
96
               

               
Alignm identity:
               
81
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
212-316
               

               
Cow position:
               
chr14:25235442-25235334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
109
               

               
Alignm identity:
               
90
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
212-326
               

               
Cow position:
               
chr14:45076982-45077099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
118
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
212-340
               

               
Cow position:
               
chr14:49501171-49501040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
212-364
               

               
Cow position:
               
chr14:12137854-12138014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
86, 37
               

               
Conread position:
               
212-371
               

               
Cow position:
               
chr14:41755994-41756153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
82, 11
               

               
Conread position:
               
212-377
               

               
Cow position:
               
chr14:31342047-31342222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
80, 11
               

               
Conread position:
               
212-385
               

               
Cow position:
               
chr14:36559389-36559208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
90, 44
               

               
Conread position:
               
212-386
               

               
Cow position:
               
chr14:27847193-27847369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
131, 35
               

               
Conread position:
               
212-389
               

               
Cow position:
               
chr14:7271420-7271228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
77, 11
               

               
Conread position:
               
212-390
               

               
Cow position:
               
chr14:10920731-10920540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
212-391
               

               
Cow position:
               
chr14:37152097-37151916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
125, 13
               

               
Conread position:
               
212-391
               

               
Cow position:
               
chr14:41623164-41623342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
130, 11
               

               
Conread position:
               
212-406
               

               
Cow position:
               
chr14:48829899-48829702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
129, 49
               

               
Conread position:
               
212-408
               

               
Cow position:
               
chr14:46431904-46432108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
83, 188
               

               
Conread position:
               
212-409
               

               
Cow position:
               
chr14:47200296-47200083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
74, 11
               

               
Conread position:
               
212-411
               

               
Cow position:
               
chr14:6409484-6409283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
78, 147
               

               
Conread position:
               
212-424
               

               
Cow position:
               
chr14:15470148-15469927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
73, 11
               

               
Conread position:
               
212-433
               

               
Cow position:
               
chr14:11576908-11577132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
75, 9
               

               
Conread position:
               
212-433
               

               
Cow position:
               
chr14:31228250-31228022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
125, 19
               

               
Conread position:
               
212-440
               

               
Cow position:
               
chr14:28924002-28924239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 191
               

               
Conread position:
               
212-441
               

               
Cow position:
               
chr14:17391876-17392112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
64, 182
               

               
Conread position:
               
212-466
               

               
Cow position:
               
chr14:21224480-21224733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
125, 108
               

               
Conread position:
               
212-478
               

               
Cow position:
               
chr14:7342302-7342558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
83, 38
               

               
Conread position:
               
212-478
               

               
Cow position:
               
chr14:29964854-29965122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 196
               

               
Conread position:
               
212-480
               

               
Cow position:
               
chr14:20826328-20826603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
90, 187
               

               
Conread position:
               
212-480
               

               
Cow position:
               
chr14:23104158-23103889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 13
               

               
Conread position:
               
212-511
               

               
Cow position:
               
chr14:40474399-40474699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
90, 167
               

               
Conread position:
               
212-538
               

               
Cow position:
               
chr14:48772756-48773069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
85, 9
               

               
Conread position:
               
212-581
               

               
Cow position:
               
chr14:16256611-16256977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
161, 86
               

               
Conread position:
               
212-601
               

               
Cow position:
               
chr14:15313395-15313771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 195
               

               
Conread position:
               
212-629
               

               
Cow position:
               
chr14:39037076-39037476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
126, 72
               

               
Conread position:
               
212-632
               

               
Cow position:
               
chr14:27919898-27919488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 164
               

               
Conread position:
               
212-667
               

               
Cow position:
               
chr14:47673042-47672598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 88
               

               
Conread position:
               
212-687
               

               
Cow position:
               
chr14:20932460-20932927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 26
               

               
Conread position:
               
212-698
               

               
Cow position:
               
chr14:21284490-21284949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
391, 59
               

               
Conread position:
               
212-699
               

               
Cow position:
               
chr14:18345887-18345410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
502
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 60
               

               
Conread position:
               
212-713
               

               
Cow position:
               
chr14:36166777-36167270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
517
               

               
Alignm identity:
               
361
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 176
               

               
Conread position:
               
212-713
               

               
Cow position:
               
chr14:37103044-37103534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
516
               

               
Alignm identity:
               
364
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 191
               

               
Conread position:
               
213-364
               

               
Cow position:
               
chr14:39097341-39097505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
213-388
               

               
Cow position:
               
chr14:8027729-8027539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
213-391
               

               
Cow position:
               
chr14:11079293-11079476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
124, 85
               

               
Conread position:
               
213-391
               

               
Cow position:
               
chr14:23465214-23465025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
80, 64
               

               
Conread position:
               
213-408
               

               
Cow position:
               
chr14:11472393-11472187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
213-418
               

               
Cow position:
               
chr14:16287322-16287531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
77, 42
               

               
Conread position:
               
213-419
               

               
Cow position:
               
chr14:14196449-14196662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
128, 36
               

               
Conread position:
               
213-420
               

               
Cow position:
               
chr14:20245331-20245118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
10, 187
               

               
Conread position:
               
213-427
               

               
Cow position:
               
chr14:7582083-7581856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
91, 53
               

               
Conread position:
               
213-468
               

               
Cow position:
               
chr14:6360231-6360498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
82, 246
               

               
Conread position:
               
213-473
               

               
Cow position:
               
chr14:4469746-4469472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
71, 159
               

               
Conread position:
               
213-477
               

               
Cow position:
               
chr14:49487802-49488065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
123, 56
               

               
Conread position:
               
213-478
               

               
Cow position:
               
chr14:16352196-16352450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
103, 86
               

               
Conread position:
               
213-487
               

               
Cow position:
               
chr14:6655750-6655467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
72, 10
               

               
Conread position:
               
213-498
               

               
Cow position:
               
chr14:44557981-44557686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
76, 17
               

               
Conread position:
               
213-512
               

               
Cow position:
               
chr14:1708821-1708518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 190
               

               
Conread position:
               
213-518
               

               
Cow position:
               
chr14:28153907-28153601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
90, 188
               

               
Conread position:
               
213-522
               

               
Cow position:
               
chr14:12509648-12509338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
71, 236
               

               
Conread position:
               
213-534
               

               
Cow position:
               
chr14:26655298-26654972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 10
               

               
Conread position:
               
213-586
               

               
Cow position:
               
chr14:7479844-7480229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
82, 227
               

               
Conread position:
               
213-586
               

               
Cow position:
               
chr14:25986350-25986733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
76, 186
               

               
Conread position:
               
213-613
               

               
Cow position:
               
chr14:25979108-25979506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
92, 209
               

               
Conread position:
               
213-628
               

               
Cow position:
               
chr14:14417663-14417260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
33, 191
               

               
Conread position:
               
213-661
               

               
Cow position:
               
chr14:38529817-38530244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
143, 59
               

               
Conread position:
               
213-664
               

               
Cow position:
               
chr14:48447327-48446878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
91, 193
               

               
Conread position:
               
213-667
               

               
Cow position:
               
chr14:17554654-17554199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
105, 218
               

               
Conread position:
               
213-667
               

               
Cow position:
               
chr14:49022049-49021619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 66
               

               
Conread position:
               
213-702
               

               
Cow position:
               
chr14:2937479-2937971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
509
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
71, 202
               

               
Conread position:
               
213-709
               

               
Cow position:
               
chr14:28304949-28304457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
518
               

               
Alignm identity:
               
375
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 191
               

               
Conread position:
               
213-710
               

               
Cow position:
               
chr14:27355233-27355718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
513
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
34, 10
               

               
Conread position:
               
213-712
               

               
Cow position:
               
chr14:28987527-28988025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
521
               

               
Alignm identity:
               
367
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 229
               

               
Conread position:
               
213-713
               

               
Cow position:
               
chr14:30760055-30760543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
519
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
79, 10
               

               
Conread position:
               
213-716
               

               
Cow position:
               
chr14:43046014-43046484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
514
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
118, 32
               

               
Conread position:
               
213-717
               

               
Cow position:
               
chr14:34200021-34199505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
535
               

               
Alignm identity:
               
384
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 206
               

               
Conread position:
               
214-366
               

               
Cow position:
               
chr14:36984563-36984714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
59, 9
               

               
Conread position:
               
214-387
               

               
Cow position:
               
chr14:20915141-20914957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
74, 9
               

               
Conread position:
               
214-388
               

               
Cow position:
               
chr14:2794274-2794090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
214-408
               

               
Cow position:
               
chr14:6420768-6420568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
79, 65
               

               
Conread position:
               
214-442
               

               
Cow position:
               
chr14:18941449-18941213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
81, 146
               

               
Conread position:
               
214-476
               

               
Cow position:
               
chr14:12073117-12072847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
88, 219
               

               
Conread position:
               
214-517
               

               
Cow position:
               
chr14:1778008-1777702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
78, 151
               

               
Conread position:
               
214-537
               

               
Cow position:
               
chr14:8946244-8945921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
118, 197
               

               
Conread position:
               
214-584
               

               
Cow position:
               
chr14:46973281-46973644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
93, 9
               

               
Conread position:
               
214-713
               

               
Cow position:
               
chr14:38168543-38169011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
502
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 91
               

               
Conread position:
               
214-716
               

               
Cow position:
               
chr14:1803280-1802783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
521
               

               
Alignm identity:
               
365
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 47
               

               
Conread position:
               
214-797
               

               
Cow position:
               
chr14:50027069-50027652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
613
               

               
Alignm identity:
               
404
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
49, 75
               

               
Conread position:
               
215-340
               

               
Cow position:
               
chr14:10838703-10838826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
215-340
               

               
Cow position:
               
chr14:39795462-39795585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
215-420
               

               
Cow position:
               
chr14:38157807-38158014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
68, 99
               

               
Conread position:
               
215-425
               

               
Cow position:
               
chr14:24537002-24537221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
77, 188
               

               
Conread position:
               
215-442
               

               
Cow position:
               
chr14:18937314-18937077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
16, 186
               

               
Conread position:
               
215-495
               

               
Cow position:
               
chr14:36443177-36442895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 184
               

               
Conread position:
               
215-532
               

               
Cow position:
               
chr14:4877388-4877072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 79
               

               
Conread position:
               
215-619
               

               
Cow position:
               
chr14:20302164-20301770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
80, 188
               

               
Conread position:
               
215-667
               

               
Cow position:
               
chr14:11810720-11810285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
80, 176
               

               
Conread position:
               
215-712
               

               
Cow position:
               
chr14:42330186-42330688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
520
               

               
Alignm identity:
               
368
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 196
               

               
Conread position:
               
215-713
               

               
Cow position:
               
chr14:20010474-20009983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
512
               

               
Alignm identity:
               
360
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 61
               

               
Conread position:
               
215-713
               

               
Cow position:
               
chr14:22988875-22989369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
511
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 184
               

               
Conread position:
               
215-718
               

               
Cow position:
               
chr14:7316631-7317175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
549
               

               
Alignm identity:
               
396
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 315
               

               
Conread position:
               
216-356
               

               
Cow position:
               
chr14:14710388-14710247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
69, 122
               

               
Conread position:
               
216-391
               

               
Cow position:
               
chr14:20483864-20483674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
216-406
               

               
Cow position:
               
chr14:50519337-50519142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
7, 30
               

               
Conread position:
               
216-439
               

               
Cow position:
               
chr14:19827631-19827410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
79, 36
               

               
Conread position:
               
216-441
               

               
Cow position:
               
chr14:21535462-21535234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
118, 81
               

               
Conread position:
               
216-443
               

               
Cow position:
               
chr14:28694878-28694642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
79, 187
               

               
Conread position:
               
216-460
               

               
Cow position:
               
chr14:27733449-27733696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 178
               

               
Conread position:
               
216-487
               

               
Cow position:
               
chr14:24749302-24749550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
216-520
               

               
Cow position:
               
chr14:24945653-24945344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
72, 33
               

               
Conread position:
               
216-525
               

               
Cow position:
               
chr14:11056892-11056588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
71, 17
               

               
Conread position:
               
216-533
               

               
Cow position:
               
chr14:15492432-15492756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
87, 33
               

               
Conread position:
               
216-536
               

               
Cow position:
               
chr14:16297633-16297936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
7, 78
               

               
Conread position:
               
216-537
               

               
Cow position:
               
chr14:22941899-22941558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 199
               

               
Conread position:
               
216-539
               

               
Cow position:
               
chr14:41303003-41302665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
15, 203
               

               
Conread position:
               
216-619
               

               
Cow position:
               
chr14:14949373-14948973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 189
               

               
Conread position:
               
216-641
               

               
Cow position:
               
chr14:28115350-28114924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 193
               

               
Conread position:
               
216-671
               

               
Cow position:
               
chr14:14466619-14466190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 172
               

               
Conread position:
               
216-680
               

               
Cow position:
               
chr14:38355049-38355485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
444, 56
               

               
Conread position:
               
216-685
               

               
Cow position:
               
chr14:5222445-5221980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 179
               

               
Conread position:
               
216-686
               

               
Cow position:
               
chr14:33791034-33791497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 157
               

               
Conread position:
               
216-686
               

               
Cow position:
               
chr14:45677072-45677531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 65
               

               
Conread position:
               
216-689
               

               
Cow position:
               
chr14:33774183-33773742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
203, 46
               

               
Conread position:
               
216-707
               

               
Cow position:
               
chr14:20667165-20666696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 83
               

               
Conread position:
               
216-708
               

               
Cow position:
               
chr14:5835771-5836234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
505
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 39
               

               
Conread position:
               
216-716
               

               
Cow position:
               
chr14:6736027-6735528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
519
               

               
Alignm identity:
               
371
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 53
               

               
Conread position:
               
217-340
               

               
Cow position:
               
chr14:12071685-12071558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
217-363
               

               
Cow position:
               
chr14:19988220-19988063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
217-382
               

               
Cow position:
               
chr14:8949493-8949665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
72, 89
               

               
Conread position:
               
217-382
               

               
Cow position:
               
chr14:29282594-29282770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
217-419
               

               
Cow position:
               
chr14:7127702-7127908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
117, 83
               

               
Conread position:
               
217-436
               

               
Cow position:
               
chr14:20234350-20234126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
82, 32
               

               
Conread position:
               
217-438
               

               
Cow position:
               
chr14:27330574-27330812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
217-441
               

               
Cow position:
               
chr14:40952104-40952330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
28, 180
               

               
Conread position:
               
217-442
               

               
Cow position:
               
chr14:23419635-23419871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
72, 188
               

               
Conread position:
               
217-476
               

               
Cow position:
               
chr14:11643404-11643153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
120, 81
               

               
Conread position:
               
217-476
               

               
Cow position:
               
chr14:27394622-27394360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
76, 149
               

               
Conread position:
               
217-574
               

               
Cow position:
               
chr14:38747521-38747861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
74, 28
               

               
Conread position:
               
217-624
               

               
Cow position:
               
chr14:47252391-47251980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
72, 225
               

               
Conread position:
               
217-718
               

               
Cow position:
               
chr14:14327283-14326765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
533
               

               
Alignm identity:
               
373
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 53
               

               
Conread position:
               
217-797
               

               
Cow position:
               
chr14:39434412-39433836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
599
               

               
Alignm identity:
               
424
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 73
               

               
Conread position:
               
218-392
               

               
Cow position:
               
chr14:4481517-4481696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
112, 82
               

               
Conread position:
               
218-394
               

               
Cow position:
               
chr14:41156877-41156697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
116, 32
               

               
Conread position:
               
218-424
               

               
Cow position:
               
chr14:20577104-20576894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
5, 164
               

               
Conread position:
               
218-440
               

               
Cow position:
               
chr14:11729264-11729039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
80, 179
               

               
Conread position:
               
218-442
               

               
Cow position:
               
chr14:20466778-20467003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
6, 159
               

               
Conread position:
               
218-532
               

               
Cow position:
               
chr14:35503206-35503523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 79
               

               
Conread position:
               
218-661
               

               
Cow position:
               
chr14:10609522-10609968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 35
               

               
Conread position:
               
218-685
               

               
Cow position:
               
chr14:35700290-35700738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
82, 67
               

               
Conread position:
               
218-713
               

               
Cow position:
               
chr14:50362635-50363131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
515
               

               
Alignm identity:
               
374
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 46
               

               
Conread position:
               
219-391
               

               
Cow position:
               
chr14:5668277-5668094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
219-485
               

               
Cow position:
               
chr14:34775905-34775637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 185
               

               
Conread position:
               
219-501
               

               
Cow position:
               
chr14:12081282-12081010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 119
               

               
Conread position:
               
219-538
               

               
Cow position:
               
chr14:40754400-40754079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 71
               

               
Conread position:
               
219-586
               

               
Cow position:
               
chr14:4996957-4997338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
65, 57
               

               
Conread position:
               
219-718
               

               
Cow position:
               
chr14:39770377-39769884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
514
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
36, 54
               

               
Conread position:
               
220-533
               

               
Cow position:
               
chr14:15504312-15504000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
61, 49
               

               
Conread position:
               
220-719
               

               
Cow position:
               
chr14:48426917-48427416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
515
               

               
Alignm identity:
               
364
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 156
               

               
Conread position:
               
221-377
               

               
Cow position:
               
chr14:40806752-40806601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
221-391
               

               
Cow position:
               
chr14:24785505-24785682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
116, 0
               

               
Conread position:
               
221-392
               

               
Cow position:
               
chr14:18112745-18112568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
94, 78
               

               
Conread position:
               
221-437
               

               
Cow position:
               
chr14:25903378-25903599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
113, 176
               

               
Conread position:
               
221-441
               

               
Cow position:
               
chr14:20482006-20481771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
61, 188
               

               
Conread position:
               
221-443
               

               
Cow position:
               
chr14:13928428-13928648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
172, 78
               

               
Conread position:
               
221-531
               

               
Cow position:
               
chr14:30756687-30757000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
81, 158
               

               
Conread position:
               
221-583
               

               
Cow position:
               
chr14:25001878-25002246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
77, 187
               

               
Conread position:
               
221-686
               

               
Cow position:
               
chr14:33714828-33714380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 178
               

               
Conread position:
               
221-690
               

               
Cow position:
               
chr14:5630014-5630475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 68
               

               
Conread position:
               
221-713
               

               
Cow position:
               
chr14:18309454-18308975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
511
               

               
Alignm identity:
               
382
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
116, 65
               

               
Conread position:
               
222-479
               

               
Cow position:
               
chr14:12884111-12884375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
113, 182
               

               
Conread position:
               
222-495
               

               
Cow position:
               
chr14:1796044-1796312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
73, 38
               

               
Conread position:
               
222-669
               

               
Cow position:
               
chr14:24981300-24981742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 164
               

               
Conread position:
               
222-713
               

               
Cow position:
               
chr14:16237663-16237172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
511
               

               
Alignm identity:
               
381
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 41
               

               
Conread position:
               
223-524
               

               
Cow position:
               
chr14:42419431-42419124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
67, 26
               

               
Conread position:
               
223-578
               

               
Cow position:
               
chr14:29592868-29592515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 129
               

               
Conread position:
               
223-797
               

               
Cow position:
               
chr14:17899327-17899917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
614
               

               
Alignm identity:
               
419
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 49
               

               
Conread position:
               
224-510
               

               
Cow position:
               
chr14:45312645-45312929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
77, 54
               

               
Conread position:
               
224-532
               

               
Cow position:
               
chr14:26796951-26796615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
224-660
               

               
Cow position:
               
chr14:48689377-48689807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
71, 55
               

               
Conread position:
               
226-619
               

               
Cow position:
               
chr14:12324257-12324661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
69, 24
               

               
Conread position:
               
229-381
               

               
Cow position:
               
chr14:20513081-20513244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
229-713
               

               
Cow position:
               
chr14:44742518-44742052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 88
               

               
Conread position:
               
230-365
               

               
Cow position:
               
chr14:41871734-41871589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
230-377
               

               
Cow position:
               
chr14:15228399-15228550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
104, 11
               

               
Conread position:
               
230-379
               

               
Cow position:
               
chr14:19772419-19772264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
75, 84
               

               
Conread position:
               
230-384
               

               
Cow position:
               
chr14:11280258-11280096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
230-389
               

               
Cow position:
               
chr14:10706733-10706898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
104, 85
               

               
Conread position:
               
230-406
               

               
Cow position:
               
chr14:35651925-35651748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
111, 60
               

               
Conread position:
               
230-413
               

               
Cow position:
               
chr14:3871877-3871685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
65, 173
               

               
Conread position:
               
230-421
               

               
Cow position:
               
chr14:40347787-40347594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
72, 58
               

               
Conread position:
               
230-428
               

               
Cow position:
               
chr14:18351012-18350798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
55, 180
               

               
Conread position:
               
230-439
               

               
Cow position:
               
chr14:20047854-20047634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
27, 22
               

               
Conread position:
               
230-445
               

               
Cow position:
               
chr14:5553172-5553395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
65, 93
               

               
Conread position:
               
230-446
               

               
Cow position:
               
chr14:7872667-7872899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
230-476
               

               
Cow position:
               
chr14:37901855-37902103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
102, 68
               

               
Conread position:
               
230-478
               

               
Cow position:
               
chr14:23962709-23962958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
61, 84
               

               
Conread position:
               
230-532
               

               
Cow position:
               
chr14:3949249-3948943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
62, 173
               

               
Conread position:
               
230-532
               

               
Cow position:
               
chr14:28803864-28803590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
230-534
               

               
Cow position:
               
chr14:46997907-46998205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
222, 92
               

               
Conread position:
               
230-563
               

               
Cow position:
               
chr14:21933490-21933158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 171
               

               
Conread position:
               
230-569
               

               
Cow position:
               
chr14:42246859-42247187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
56, 19
               

               
Conread position:
               
230-636
               

               
Cow position:
               
chr14:16760254-16760653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
78, 171
               

               
Conread position:
               
230-686
               

               
Cow position:
               
chr14:19594280-19593832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 73
               

               
Conread position:
               
230-686
               

               
Cow position:
               
chr14:23712550-23712994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
156, 73
               

               
Conread position:
               
230-686
               

               
Cow position:
               
chr14:33247565-33247130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 55
               

               
Conread position:
               
230-712
               

               
Cow position:
               
chr14:7695119-7695577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
496
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 11
               

               
Conread position:
               
230-712
               

               
Cow position:
               
chr14:48496292-48495814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
499
               

               
Alignm identity:
               
359
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 171
               

               
Conread position:
               
230-713
               

               
Cow position:
               
chr14:12520449-12519997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 167
               

               
Conread position:
               
230-782
               

               
Cow position:
               
chr14:26433394-26432820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
591
               

               
Alignm identity:
               
401
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 180
               

               
Conread position:
               
231-477
               

               
Cow position:
               
chr14:48744371-48744617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
71, 174
               

               
Conread position:
               
231-478
               

               
Cow position:
               
chr14:25381296-25381526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
106, 41
               

               
Conread position:
               
231-533
               

               
Cow position:
               
chr14:23080898-23080604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
38, 107
               

               
Conread position:
               
231-535
               

               
Cow position:
               
chr14:33341607-33341918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 95
               

               
Conread position:
               
231-707
               

               
Cow position:
               
chr14:7959654-7960089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
368, 99
               

               
Conread position:
               
231-718
               

               
Cow position:
               
chr14:21963976-21964455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
500
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 21
               

               
Conread position:
               
231-721
               

               
Cow position:
               
chr14:27848035-27848540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
520
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 25
               

               
Conread position:
               
231-792
               

               
Cow position:
               
chr14:13582899-13582332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
591
               

               
Alignm identity:
               
399
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 177
               

               
Conread position:
               
232-374
               

               
Cow position:
               
chr14:22231051-22230901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
232-379
               

               
Cow position:
               
chr14:44649163-44649310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
60, 112
               

               
Conread position:
               
232-589
               

               
Cow position:
               
chr14:14182208-14182561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
35, 82
               

               
Conread position:
               
232-640
               

               
Cow position:
               
chr14:40165286-40165679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 15
               

               
Conread position:
               
232-671
               

               
Cow position:
               
chr14:26941364-26940933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
70, 206
               

               
Conread position:
               
232-701
               

               
Cow position:
               
chr14:8101654-8102099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 50
               

               
Conread position:
               
233-501
               

               
Cow position:
               
chr14:12127539-12127284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
233-533
               

               
Cow position:
               
chr14:46685156-46685458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
59, 156
               

               
Conread position:
               
234-335
               

               
Cow position:
               
chr14:12961105-12961002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
104
               

               
Alignm identity:
               
88
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
234-472
               

               
Cow position:
               
chr14:41191239-41190985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
67, 220
               

               
Conread position:
               
234-532
               

               
Cow position:
               
chr14:26628667-26628366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
58, 164
               

               
Conread position:
               
234-640
               

               
Cow position:
               
chr14:1646325-1645931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
64, 22
               

               
Conread position:
               
234-713
               

               
Cow position:
               
chr14:17755435-17755894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 27
               

               
Conread position:
               
235-713
               

               
Cow position:
               
chr14:18904728-18904273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
364, 47
               

               
Conread position:
               
237-391
               

               
Cow position:
               
chr14:14280101-14280256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
100, 35
               

               
Conread position:
               
237-435
               

               
Cow position:
               
chr14:42422950-42423157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
61, 166
               

               
Conread position:
               
237-689
               

               
Cow position:
               
chr14:14187207-14187644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
362, 10
               

               
Conread position:
               
241-391
               

               
Cow position:
               
chr14:21530210-21530052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
57, 144
               

               
Conread position:
               
241-506
               

               
Cow position:
               
chr14:22236617-22236353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
54, 128
               

               
Conread position:
               
243-436
               

               
Cow position:
               
chr14:11311768-11311569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
52, 124
               

               
Conread position:
               
243-494
               

               
Cow position:
               
chr14:50337647-50337898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
36, 52
               

               
Conread position:
               
243-503
               

               
Cow position:
               
chr14:11285447-11285705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
59, 29
               

               
Conread position:
               
244-522
               

               
Cow position:
               
chr14:2038924-2038666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
247-338
               

               
Cow position:
               
chr14:25277645-25277734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
92
               

               
Alignm identity:
               
80
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
247-394
               

               
Cow position:
               
chr14:12617622-12617472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
94, 43
               

               
Conread position:
               
248-437
               

               
Cow position:
               
chr14:25824570-25824763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
15, 39
               

               
Conread position:
               
248-533
               

               
Cow position:
               
chr14:27076839-27077145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
50, 168
               

               
Conread position:
               
248-590
               

               
Cow position:
               
chr14:30606047-30605700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
43, 160
               

               
Conread position:
               
248-689
               

               
Cow position:
               
chr14:41127779-41128201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 76
               

               
Conread position:
               
250-469
               

               
Cow position:
               
chr14:45291496-45291281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
89, 40
               

               
Conread position:
               
251-402
               

               
Cow position:
               
chr14:27303525-27303693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
251-686
               

               
Cow position:
               
chr14:27305025-27305464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
51, 200
               

               
Conread position:
               
251-713
               

               
Cow position:
               
chr14:19188926-19189372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 146
               

               
Conread position:
               
254-711
               

               
Cow position:
               
chr14:106683-106242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 145
               

               
Conread position:
               
255-542
               

               
Cow position:
               
chr14:4203217-4202925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 149
               

               
Conread position:
               
255-572
               

               
Cow position:
               
chr14:37447588-37447278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
37, 134
               

               
Conread position:
               
255-583
               

               
Cow position:
               
chr14:23761761-23762093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
225, 48
               

               
Conread position:
               
256-574
               

               
Cow position:
               
chr14:19618871-19618548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 70
               

               
Conread position:
               
256-713
               

               
Cow position:
               
chr14:41479782-41479324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 150
               

               
Conread position:
               
257-503
               

               
Cow position:
               
chr14:34331443-34331197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
77, 147
               

               
Conread position:
               
257-784
               

               
Cow position:
               
chr14:34983749-34984266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
545
               

               
Alignm identity:
               
363
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
17, 149
               

               
Conread position:
               
267-583
               

               
Cow position:
               
chr14:33830194-33830510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
35, 13
               

               
Conread position:
               
270-562
               

               
Cow position:
               
chr14:40283515-40283802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
72, 15
               

               
Conread position:
               
272-584
               

               
Cow position:
               
chr14:1859713-1859409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
60, 9
               

               
Conread position:
               
272-635
               

               
Cow position:
               
chr14:6175499-6175836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
295, 28
               

               
Conread position:
               
274-582
               

               
Cow position:
               
chr14:26490844-26490531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
58, 124
               

               
Conread position:
               
275-713
               

               
Cow position:
               
chr14:22381674-22381220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 195
               

               
Conread position:
               
279-535
               

               
Cow position:
               
chr14:48961488-48961738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
58, 30
               

               
Conread position:
               
279-586
               

               
Cow position:
               
chr14:16032916-16033223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
6, 116
               

               
Conread position:
               
280-698
               

               
Cow position:
               
chr14:15055087-15054668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
13, 121
               

               
Conread position:
               
281-532
               

               
Cow position:
               
chr14:46654635-46654385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
11, 39
               

               
Conread position:
               
281-533
               

               
Cow position:
               
chr14:45718356-45718106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
62, 121
               

               
Conread position:
               
284-439
               

               
Cow position:
               
chr14:10691718-10691556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
50, 115
               

               
Conread position:
               
284-535
               

               
Cow position:
               
chr14:42436935-42437186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 117
               
UCSC Genome Browser

               
Conread position:
               
284-539
               

               
Cow position:
               
chr14:18763522-18763280 (view  custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
59, 18
               
UCSC Genome Browser

               
               
               
Conread position:
284-540

               
               
               
Cow position:
chr14:36453708-36453465 (view  custom track)

               
               
               
Alignm length:
261

               
               
               
Alignm identity:
186

               
               
               
Alignm E-value:
8e-28

               
               
               
Alignm gaps (pig, cow):
172, 53
UCSC Genome Browser

               
               
               
Conread position:
284-586

               
               
               
Cow position:
chr14:1978153-1977866 (view  custom track)

               
               
               
Alignm length:
305

               
               
               
Alignm identity:
211

               
               
               
Alignm E-value:
1e-32

               
               
               
Alignm gaps (pig, cow):
91, 56

               
               
               Conread position:284-627
               
               
               Cow position:chr14:8749999-8750319 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:345
               
               
               Alignm identity:225
               
               
               Alignm E-value:2e-23
               
               
               Alignm gaps (pig, cow):316, 42

               
               
               Conread position:284-639
               
               
               Cow position:chr14:28003877-28004237 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:373
               
               
               Alignm identity:253
               
               
               Alignm E-value:5e-34
               
               
               Alignm gaps (pig, cow):27, 121

               
               
               Conread position:284-662
               
               
               Cow position:chr14:19129416-19129791 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:387
               
               
               Alignm identity:308
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):53, 120

               
               
               Conread position:284-684
               
               
               Cow position:chr14:26097785-26097382 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:415
               
               
               Alignm identity:295
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):21, 116

               
               
               Conread position:284-710
               
               
               Cow position:chr14:45605008-45605421 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:435
               
               
               Alignm identity:305
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):54, 114

               
               
               Conread position:284-713
               
               
               Cow position:chr14:21018027-21018448 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:441
               
               
               Alignm identity:286
               
               
               Alignm E-value:3e-29
               
               
               Alignm gaps (pig, cow):41, 5

               
               
               Conread position:284-713
               
               
               Cow position:chr14:22583065-22583473 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:440
               
               
               Alignm identity:318
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):45, 24

               
               
               Conread position:284-713
               
               
               Cow position:chr14:37884006-37883582 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:445
               
               
               Alignm identity:334
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):48, 119

               
               
               Conread position:285-533
               
               
               Cow position:chr14:12035322-12035567 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:256
               
               
               Alignm identity:191
               
               
               Alignm E-value:3e-39
               
               
               Alignm gaps (pig, cow):52, 23

               
               
               Conread position:285-538
               
               
               Cow position:chr14:19951477-19951734 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:263
               
               
               Alignm identity:190
               
               
               Alignm E-value:2e-36
               
               
               Alignm gaps (pig, cow):54, 121

               
               
               Conread position:285-685
               
               
               Cow position:chr14:14316800-14317173 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:413
               
               
               Alignm identity:298
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):52, 13

               
               
               Conread position:285-722
               
               
               Cow position:chr14:17238271-17238706 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:447
               
               
               Alignm identity:319
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):16, 63

               
               
               Conread position:285-786
               
               
               Cow position:chr14:37131573-37132064 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:513
               
               
               Alignm identity:348
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):44, 76

               
               
               Conread position:285-797
               
               
               Cow position:chr14:39618465-39617941 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:542
               
               
               Alignm identity:376
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):57, 114

               
               
               Conread position:286-684
               
               
               Cow position:chr14:36709048-36709428 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:405
               
               
               Alignm identity:265
               
               
               Alignm E-value:3e-29
               
               
               Alignm gaps (pig, cow):63, 23

               
               
               Conread position:286-710
               
               
               Cow position:chr14:18657693-18657266 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:443
               
               
               Alignm identity:310
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):51, 22

               
               
               Conread position:287-476
               
               
               Cow position:chr14:15039694-15039508 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:191
               
               
               Alignm identity:141
               
               
               Alignm E-value:1e-29
               
               
               Alignm gaps (pig, cow):38, 111

               
               
               Conread position:287-685
               
               
               Cow position:chr14:44257837-44258221 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:410
               
               
               Alignm identity:285
               
               
               Alignm E-value:3.99931e-42
               
               
               Alignm gaps (pig, cow):54, 24

               
               
               Conread position:289-527
               
               
               Cow position:chr14:6226698-6226473 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:239
               
               
               Alignm identity:177
               
               
               Alignm E-value:2e-36
               
               
               Alignm gaps (pig, cow):61, 0

               
               
               Conread position:289-667
               
               
               Cow position:chr14:4990917-4991276 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:386
               
               
               Alignm identity:271
               
               
               Alignm E-value:5.04467e-44
               
               
               Alignm gaps (pig, cow):48, 110

               
               
               Conread position:289-689
               
               
               Cow position:chr14:27312328-27312735 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:420
               
               
               Alignm identity:290
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):48, 164

               
               
               Conread position:289-713
               
               
               Cow position:chr14:20600300-20600716 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:438
               
               
               Alignm identity:309
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):48, 117

               
               
               Conread position:290-573
               
               
               Cow position:chr14:44848454-44848173 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:294
               
               
               Alignm identity:208
               
               
               Alignm E-value:1e-31
               
               
               Alignm gaps (pig, cow):19, 86

               
               
               Conread position:290-684
               
               
               Cow position:chr14:31784885-31785279 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:405
               
               
               Alignm identity:263
               
               
               Alignm E-value:4e-31
               
               
               Alignm gaps (pig, cow):44, 59

               
               
               Conread position:290-700
               
               
               Cow position:chr14:25779017-25779416 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:424
               
               
               Alignm identity:303
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):12, 115

               
               
               Conread position:291-413
               
               
               Cow position:chr14:26456290-26456417 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:130
               
               
               Alignm identity:103
               
               
               Alignm E-value:4e-21
               
               
               Alignm gaps (pig, cow):39, 108

               
               
               Conread position:291-438
               
               
               Cow position:chr14:30431651-30431499 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:155
               
               
               Alignm identity:123
               
               
               Alignm E-value:9e-29
               
               
               Alignm gaps (pig, cow):43, 108

               
               
               Conread position:291-578
               
               
               Cow position:chr14:19394278-19394568 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:300
               
               
               Alignm identity:223
               
               
               Alignm E-value:9.94922e-44
               
               
               Alignm gaps (pig, cow):14, 117

               
               
               Conread position:293-474
               
               
               Cow position:chr14:3943631-3943452 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:189
               
               
               Alignm identity:150
               
               
               Alignm E-value:1e-33
               
               
               Alignm gaps (pig, cow):41, 109

               
               
               Conread position:293-477
               
               
               Cow position:chr14:34399879-34399687 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:195
               
               
               Alignm identity:151
               
               
               Alignm E-value:4e-33
               
               
               Alignm gaps (pig, cow):50, 110

               
               
               Conread position:293-477
               
               
               Cow position:chr14:34449052-34448864 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:192
               
               
               Alignm identity:147
               
               
               Alignm E-value:4e-32
               
               
               Alignm gaps (pig, cow):50, 110

               
               
               Conread position:293-583
               
               
               Cow position:chr14:1868464-1868180 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:299
               
               
               Alignm identity:218
               
               
               Alignm E-value:9.99967e-42
               
               
               Alignm gaps (pig, cow):42, 112

               
               
               Conread position:298-422
               
               
               Cow position:chr14:21406786-21406657 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:132
               
               
               Alignm identity:104
               
               
               Alignm E-value:1e-21
               
               
               Alignm gaps (pig, cow):39, 101

               
               
               Conread position:299-574
               
               
               Cow position:chr14:27275088-27275366 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:289
               
               
               Alignm identity:219
               
               
               Alignm E-value:1.4013e-45
               
               
               Alignm gaps (pig, cow):38, 79

               
               
               Conread position:299-649
               
               
               Cow position:chr14:19372264-19372610 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:360
               
               
               Alignm identity:237
               
               
               Alignm E-value:3e-28
               
               
               Alignm gaps (pig, cow):35, 103

               
               
               Conread position:299-713
               
               
               Cow position:chr14:19863509-19863112 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:423
               
               
               Alignm identity:322
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):29, 108

               
               
               Conread position:301-659
               
               
               Cow position:chr14:9539258-9538917 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:367
               
               
               Alignm identity:243
               
               
               Alignm E-value:6e-26
               
               
               Alignm gaps (pig, cow):36, 80

               
               
               Conread position:301-709
               
               
               Cow position:chr14:4109563-4109143 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:439
               
               
               Alignm identity:317
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):31, 82

               
               
               Conread position:303-661
               
               
               Cow position:chr14:17841362-17841008 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:365
               
               
               Alignm identity:251
               
               
               Alignm E-value:1.4013e-45
               
               
               Alignm gaps (pig, cow):38, 100

               
               
               Conread position:303-682
               
               
               Cow position:chr14:16834251-16834634 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:396
               
               
               Alignm identity:270
               
               
               Alignm E-value:8e-39
               
               
               Alignm gaps (pig, cow):26, 98

               
               
               Conread position:304-644
               
               
               Cow position:chr14:33309573-33309248 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:349
               
               
               Alignm identity:259
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):31, 100

               
               
               Conread position:305-542
               
               
               Cow position:chr14:8470525-8470278 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:251
               
               
               Alignm identity:176
               
               
               Alignm E-value:8e-28
               
               
               Alignm gaps (pig, cow):37, 155

               
               
               Conread position:305-685
               
               
               Cow position:chr14:35018822-35018449 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:393
               
               
               Alignm identity:286
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):38, 97

               
               
               Conread position:305-701
               
               
               Cow position:chr14:49086238-49086626 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:408
               
               
               Alignm identity:293
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):37, 83

               
               
               Conread position:306-689
               
               
               Cow position:chr14:48412950-48412564 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:398
               
               
               Alignm identity:287
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):32, 99

               
               
               Conread position:308-663
               
               
               Cow position:chr14:34355776-34355421 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:376
               
               
               Alignm identity:260
               
               
               Alignm E-value:1e-33
               
               
               Alignm gaps (pig, cow):29, 155

               
               
               Conread position:311-684
               
               
               Cow position:chr14:30661935-30662293 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:382
               
               
               Alignm identity:270
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):24, 65

               
               
               Conread position:311-713
               
               
               Cow position:chr14:8784138-8784510 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:410
               
               
               Alignm identity:285
               
               
               Alignm E-value:2e-37
               
               
               Alignm gaps (pig, cow):28, 41

               
               
               Conread position:312-700
               
               
               Cow position:chr14:25403997-25403622 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:401
               
               
               Alignm identity:297
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):25, 92

               
               
               Conread position:317-796
               
               
               Cow position:chr14:41180771-41180277 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:507
               
               
               Alignm identity:337
               
               
               Alignm E-value:3.99931e-42
               
               
               Alignm gaps (pig, cow):20, 89

               
               
               Conread position:324-718
               
               
               Cow position:chr14:42784921-42785278 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:399
               
               
               Alignm identity:279
               
               
               Alignm E-value:2e-37
               
               
               Alignm gaps (pig, cow):344, 52

               
               
               Conread position:330-655
               
               
               Cow position:chr14:50055361-50055674 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:328
               
               
               Alignm identity:226
               
               
               Alignm E-value:7e-38
               
               
               Alignm gaps (pig, cow):231, 63

               
               
               Conread position:333-476
               
               
               Cow position:chr14:46061908-46062050 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:145
               
               
               Alignm identity:120
               
               
               Alignm E-value:1e-33
               
               
               Alignm gaps (pig, cow):112, 63

               
               
               Conread position:333-519
               
               
               Cow position:chr14:33338509-33338328 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:187
               
               
               Alignm identity:133
               
               
               Alignm E-value:5e-24
               
               
               Alignm gaps (pig, cow):60, 0

               
               
               Conread position:333-524
               
               
               Cow position:chr14:19359854-19360045 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:195
               
               
               Alignm identity:140
               
               
               Alignm E-value:2e-25
               
               
               Alignm gaps (pig, cow):10, 63

               
               
               Conread position:333-593
               
               
               Cow position:chr14:5572909-5573164 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:266
               
               
               Alignm identity:196
               
               
               Alignm E-value:8e-39
               
               
               Alignm gaps (pig, cow):205, 64

               
               
               Conread position:333-629
               
               
               Cow position:chr14:32732718-32732997 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:305
               
               
               Alignm identity:213
               
               
               Alignm E-value:6e-26
               
               
               Alignm gaps (pig, cow):123, 43

               
               
               Conread position:333-634
               
               
               Cow position:chr14:29029795-29030080 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:303
               
               
               Alignm identity:219
               
               
               Alignm E-value:9.99967e-42
               
               
               Alignm gaps (pig, cow):160, 38

               
               
               Conread position:333-640
               
               
               Cow position:chr14:20385019-20384723 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:311
               
               
               Alignm identity:219
               
               
               Alignm E-value:8e-39
               
               
               Alignm gaps (pig, cow):266, 59

               
               
               Conread position:333-687
               
               
               Cow position:chr14:38378982-38379329 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:365
               
               
               Alignm identity:266
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):57, 120

               
               
               Conread position:333-689
               
               
               Cow position:chr14:3564250-3564584 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:363
               
               
               Alignm identity:261
               
               
               Alignm E-value:9.94922e-44
               
               
               Alignm gaps (pig, cow):327, 64

               
               
               Conread position:333-713
               
               
               Cow position:chr14:39778718-39779088 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:387
               
               
               Alignm identity:270
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):215, 64

               
               
               Conread position:333-713
               
               
               Cow position:chr14:41325481-41325104 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:391
               
               
               Alignm identity:276
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):132, 65

               
               
               Conread position:334-440
               
               
               Cow position:chr14:26499572-26499676 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:107
               
               
               Alignm identity:87
               
               
               Alignm E-value:4e-21
               
               
               Alignm gaps (pig, cow):63, 0

               
               
               Conread position:334-533
               
               
               Cow position:chr14:32553339-32553150 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:200
               
               
               Alignm identity:150
               
               
               Alignm E-value:4e-31
               
               
               Alignm gaps (pig, cow):63, 0

               
               
               Conread position:336-618
               
               
               Cow position:chr14:26191135-26190860 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:284
               
               
               Alignm identity:202
               
               
               Alignm E-value:9.99995e-41
               
               
               Alignm gaps (pig, cow):262, 60

               
               
               Conread position:336-663
               
               
               Cow position:chr14:6190962-6190657 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:330
               
               
               Alignm identity:223
               
               
               Alignm E-value:3e-28
               
               
               Alignm gaps (pig, cow):8, 61

               
               
               Conread position:336-699
               
               
               Cow position:chr14:22966724-22967072 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:369
               
               
               Alignm identity:283
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):257, 60

               
               
               Conread position:336-709
               
               
               Cow position:chr14:27591987-27591614 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:383
               
               
               Alignm identity:254
               
               
               Alignm E-value:2e-35
               
               
               Alignm gaps (pig, cow):214, 19

               
               
               Conread position:336-713
               
               
               Cow position:chr14:40269872-40269506 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:388
               
               
               Alignm identity:274
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):267, 62

               
               
               Conread position:336-718
               
               
               Cow position:chr14:43249557-43249923 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:388
               
               
               Alignm identity:288
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):237, 60

               
               
               Conread position:336-746
               
               
               Cow position:chr14:20468126-20467748 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:416
               
               
               Alignm identity:294
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):225, 59

               
               
               Conread position:338-713
               
               
               Cow position:chr14:10702868-10702499 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:383
               
               
               Alignm identity:265
               
               
               Alignm E-value:5.04467e-44
               
               
               Alignm gaps (pig, cow):58, 30

               
               
               Conread position:346-663
               
               
               Cow position:chr14:37884431-37884130 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:320
               
               
               Alignm identity:221
               
               
               Alignm E-value:2e-34
               
               
               Alignm gaps (pig, cow):74, 51

               
               
               Conread position:346-686
               
               
               Cow position:chr14:11615242-11614913 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:346
               
               
               Alignm identity:223
               
               
               Alignm E-value:5e-23
               
               
               Alignm gaps (pig, cow):308, 49

               
               
               Conread position:346-688
               
               
               Cow position:chr14:47591934-47591611 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:346
               
               
               Alignm identity:233
               
               
               Alignm E-value:3e-29
               
               
               Alignm gaps (pig, cow):253, 7

               
               
               Conread position:346-689
               
               
               Cow position:chr14:25231671-25231338 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:350
               
               
               Alignm identity:247
               
               
               Alignm E-value:5.60519e-45
               
               
               Alignm gaps (pig, cow):112, 50

               
               
               Conread position:346-710
               
               
               Cow position:chr14:40432904-40433249 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:366
               
               
               Alignm identity:208
               
               
               Alignm E-value:2e-24
               
               
               Alignm gaps (pig, cow):252, 45

               
               
               Conread position:346-713
               
               
               Cow position:chr14:39807479-39807127 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:376
               
               
               Alignm identity:245
               
               
               Alignm E-value:5e-24
               
               
               Alignm gaps (pig, cow):63, 9

               
               
               Conread position:350-699
               
               
               Cow position:chr14:28795655-28795997 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:355
               
               
               Alignm identity:255
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):249, 46

               
               
               Conread position:353-713
               
               
               Cow position:chr14:43453194-43452845 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:367
               
               
               Alignm identity:266
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):196, 42

               
               
               Conread position:358-713
               
               
               Cow position:chr14:24893759-24894092 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:361
               
               
               Alignm identity:252
               
               
               Alignm E-value:8e-39
               
               
               Alignm gaps (pig, cow):241, 85

               
               
               Conread position:359-718
               
               
               Cow position:chr14:33538944-33538590 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:371
               
               
               Alignm identity:286
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):80, 38

               
               
               Conread position:362-713
               
               
               Cow position:chr14:33326400-33326060 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:359
               
               
               Alignm identity:266
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):118, 35

               
               
               Conread position:366-497
               
               
               Cow position:chr14:41716114-41716248 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:136
               
               
               Alignm identity:107
               
               
               Alignm E-value:2e-23
               
               
               Alignm gaps (pig, cow):25, 6

               
               
               Conread position:366-575
               
               
               Cow position:chr14:24991115-24991328 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:219
               
               
               Alignm identity:154
               
               
               Alignm E-value:2e-23
               
               
               Alignm gaps (pig, cow):30, 80

               
               
               Conread position:367-713
               
               
               Cow position:chr14:31734855-31734521 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:352
               
               
               Alignm identity:257
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):126, 29

               
               
               Conread position:368-775
               
               
               Cow position:chr14:445405-445810 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:433
               
               
               Alignm identity:292
               
               
               Alignm E-value:7e-27
               
               
               Alignm gaps (pig, cow):70, 123

               
               
               Conread position:369-659
               
               
               Cow position:chr14:25378494-25378214 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:293
               
               
               Alignm identity:196
               
               
               Alignm E-value:2e-27
               
               
               Alignm gaps (pig, cow):139, 27

               
               
               Conread position:369-698
               
               
               Cow position:chr14:33828164-33828467 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:335
               
               
               Alignm identity:255
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):195, 28

               
               
               Conread position:369-718
               
               
               Cow position:chr14:24684130-24683800 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:351
               
               
               Alignm identity:258
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):234, 27

               
               
               Conread position:369-796
               
               
               Cow position:chr14:7558439-7557996 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:456
               
               
               Alignm identity:330
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):66, 28

               
               
               Conread position:370-713
               
               
               Cow position:chr14:41756267-41756593 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:349
               
               
               Alignm identity:253
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):229, 27

               
               
               Conread position:373-718
               
               
               Cow position:chr14:35047581-35047911 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:352
               
               
               Alignm identity:246
               
               
               Alignm E-value:7e-37
               
               
               Alignm gaps (pig, cow):60, 17

               
               
               Conread position:375-583
               
               
               Cow position:chr14:33643772-33643577 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:209
               
               
               Alignm identity:160
               
               
               Alignm E-value:4e-33
               
               
               Alignm gaps (pig, cow):18, 0

               
               
               Conread position:376-718
               
               
               Cow position:chr14:10912956-10912644 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:344
               
               
               Alignm identity:237
               
               
               Alignm E-value:3e-30
               
               
               Alignm gaps (pig, cow):223, 18

               
               
               Conread position:378-797
               
               
               Cow position:chr14:38296271-38295847 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:437
               
               
               Alignm identity:304
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):53, 18

               
               
               Conread position:380-583
               
               
               Cow position:chr14:14580882-14581079 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:209
               
               
               Alignm identity:160
               
               
               Alignm E-value:4e-32
               
               
               Alignm gaps (pig, cow):155, 19

               
               
               Conread position:382-531
               
               
               Cow position:chr14:35021908-35022054 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:152
               
               
               Alignm identity:122
               
               
               Alignm E-value:3e-28
               
               
               Alignm gaps (pig, cow):14, 21

               
               
               Conread position:383-681
               
               
               Cow position:chr14:8964562-8964841 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:300
               
               
               Alignm identity:216
               
               
               Alignm E-value:8e-39
               
               
               Alignm gaps (pig, cow):215, 61

               
               
               Conread position:385-535
               
               
               Cow position:chr14:5667869-5667723 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:152
               
               
               Alignm identity:113
               
               
               Alignm E-value:4e-21
               
               
               Alignm gaps (pig, cow):106, 33

               
               
               Conread position:385-680
               
               
               Cow position:chr14:7482072-7482357 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:304
               
               
               Alignm identity:221
               
               
               Alignm E-value:7e-38
               
               
               Alignm gaps (pig, cow):81, 58

               
               
               Conread position:389-578
               
               
               Cow position:chr14:20483437-20483254 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:190
               
               
               Alignm identity:132
               
               
               Alignm E-value:1e-21
               
               
               Alignm gaps (pig, cow):54, 0

               
               
               Conread position:395-533
               
               
               Cow position:chr14:38673605-38673471 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:140
               
               
               Alignm identity:113
               
               
               Alignm E-value:7e-27
               
               
               Alignm gaps (pig, cow):50, 8

               
               
               Conread position:395-662
               
               
               Cow position:chr14:4482153-4482428 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:280
               
               
               Alignm identity:193
               
               
               Alignm E-value:3e-28
               
               
               Alignm gaps (pig, cow):105, 61

               
               
               Conread position:395-665
               
               
               Cow position:chr14:24785971-24786215 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:271
               
               
               Alignm identity:202
               
               
               Alignm E-value:2e-36
               
               
               Alignm gaps (pig, cow):49, 0

               
               
               Conread position:395-667
               
               
               Cow position:chr14:24580954-24581208 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:274
               
               
               Alignm identity:204
               
               
               Alignm E-value:3e-40
               
               
               Alignm gaps (pig, cow):169, 54

               
               
               Conread position:395-674
               
               
               Cow position:chr14:23591260-23591554 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:300
               
               
               Alignm identity:209
               
               
               Alignm E-value:3e-29
               
               
               Alignm gaps (pig, cow):151, 49

               
               
               Conread position:395-686
               
               
               Cow position:chr14:11748882-11748614 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:297
               
               
               Alignm identity:220
               
               
               Alignm E-value:7e-37
               
               
               Alignm gaps (pig, cow):76, 13

               
               
               Conread position:395-701
               
               
               Cow position:chr14:19221904-19222202 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:310
               
               
               Alignm identity:229
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):159, 54

               
               
               Conread position:395-710
               
               
               Cow position:chr14:8754345-8754656 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:326
               
               
               Alignm identity:238
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):40, 139

               
               
               Conread position:395-713
               
               
               Cow position:chr14:24991848-24992147 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:323
               
               
               Alignm identity:246
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):272, 52

               
               
               Conread position:397-681
               
               
               Cow position:chr14:39422565-39422287 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:289
               
               
               Alignm identity:206
               
               
               Alignm E-value:2e-38
               
               
               Alignm gaps (pig, cow):176, 50

               
               
               Conread position:397-689
               
               
               Cow position:chr14:14280439-14280728 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:300
               
               
               Alignm identity:222
               
               
               Alignm E-value:5.60519e-45
               
               
               Alignm gaps (pig, cow):131, 58

               
               
               Conread position:397-713
               
               
               Cow position:chr14:46490231-46489921 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:323
               
               
               Alignm identity:225
               
               
               Alignm E-value:8e-39
               
               
               Alignm gaps (pig, cow):151, 50

               
               
               Conread position:397-719
               
               
               Cow position:chr14:40347133-40346838 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:327
               
               
               Alignm identity:237
               
               
               Alignm E-value:8e-39
               
               
               Alignm gaps (pig, cow):271, 50

               
               
               Conread position:398-534
               
               
               Cow position:chr14:26456538-26456670 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:137
               
               
               Alignm identity:107
               
               
               Alignm E-value:2e-23
               
               
               Alignm gaps (pig, cow):47, 0

               
               
               Conread position:398-586
               
               
               Cow position:chr14:21230632-21230817 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:192
               
               
               Alignm identity:136
               
               
               Alignm E-value:4e-21
               
               
               Alignm gaps (pig, cow):60, 28

               
               
               Conread position:398-615
               
               
               Cow position:chr14:37435274-37435063 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:221
               
               
               Alignm identity:168
               
               
               Alignm E-value:2e-36
               
               
               Alignm gaps (pig, cow):49, 99

               
               
               Conread position:398-745
               
               
               Cow position:chr14:29771803-29772133 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:353
               
               
               Alignm identity:240
               
               
               Alignm E-value:1e-30
               
               
               Alignm gaps (pig, cow):231, 15

               
               
               Conread position:400-709
               
               
               Cow position:chr14:12250165-12249866 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:316
               
               
               Alignm identity:232
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):193, 45

               
               
               Conread position:400-717
               
               
               Cow position:chr14:44383178-44382862 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:324
               
               
               Alignm identity:229
               
               
               Alignm E-value:5.60519e-45
               
               
               Alignm gaps (pig, cow):59, 144

               
               
               Conread position:401-713
               
               
               Cow position:chr14:11981669-11981988 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:325
               
               
               Alignm identity:234
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):77, 134

               
               
               Conread position:402-534
               
               
               Cow position:chr14:37467729-37467601 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:133
               
               
               Alignm identity:108
               
               
               Alignm E-value:2e-27
               
               
               Alignm gaps (pig, cow):40, 0

               
               
               Conread position:402-540
               
               
               Cow position:chr14:44731137-44731277 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:141
               
               
               Alignm identity:111
               
               
               Alignm E-value:2e-27
               
               
               Alignm gaps (pig, cow):47, 0

               
               
               Conread position:403-711
               
               
               Cow position:chr14:37934578-37934277 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:315
               
               
               Alignm identity:227
               
               
               Alignm E-value:9.99995e-41
               
               
               Alignm gaps (pig, cow):170, 22

               
               
               Conread position:404-520
               
               
               Cow position:chr14:19513378-19513265 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:117
               
               
               Alignm identity:94
               
               
               Alignm E-value:1e-21
               
               
               Alignm gaps (pig, cow):32, 0

               
               
               Conread position:404-667
               
               
               Cow position:chr14:23464781-23464530 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:266
               
               
               Alignm identity:189
               
               
               Alignm E-value:1e-32
               
               
               Alignm gaps (pig, cow):157, 41

               
               
               Conread position:405-713
               
               
               Cow position:chr14:28090939-28090640 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:314
               
               
               Alignm identity:219
               
               
               Alignm E-value:2e-37
               
               
               Alignm gaps (pig, cow):194, 39

               
               
               Conread position:409-669
               
               
               Cow position:chr14:24797538-24797293 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:262
               
               
               Alignm identity:184
               
               
               Alignm E-value:9e-29
               
               
               Alignm gaps (pig, cow):24, 48

               
               
               Conread position:415-681
               
               
               Cow position:chr14:15913509-15913251 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:272
               
               
               Alignm identity:197
               
               
               Alignm E-value:2e-35
               
               
               Alignm gaps (pig, cow):25, 142

               
               
               Conread position:433-578
               
               
               Cow position:chr14:42277006-42277151 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:149
               
               
               Alignm identity:118
               
               
               Alignm E-value:2e-26
               
               
               Alignm gaps (pig, cow):115, 16

               
               
               Conread position:449-671
               
               
               Cow position:chr14:19624161-19624380 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:225
               
               
               Alignm identity:167
               
               
               Alignm E-value:2e-37
               
               
               Alignm gaps (pig, cow):150, 104

               
               
               Conread position:450-688
               
               
               Cow position:chr14:44878711-44878476 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:245
               
               
               Alignm identity:173
               
               
               Alignm E-value:3e-28
               
               
               Alignm gaps (pig, cow):8, 80

               
               
               Conread position:450-713
               
               
               Cow position:chr14:23055682-23055939 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:268
               
               
               Alignm identity:187
               
               
               Alignm E-value:1e-31
               
               
               Alignm gaps (pig, cow):213, 70

               
               
               Conread position:450-718
               
               
               Cow position:chr14:34395596-34395332 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:271
               
               
               Alignm identity:183
               
               
               Alignm E-value:3e-29
               
               
               Alignm gaps (pig, cow):149, 59

               
               
               Conread position:451-722
               
               
               Cow position:chr14:12546508-12546246 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:276
               
               
               Alignm identity:188
               
               
               Alignm E-value:2e-25
               
               
               Alignm gaps (pig, cow):80, 96

               
               
               Conread position:451-770
               
               
               Cow position:chr14:12614016-12613703 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:334
               
               
               Alignm identity:230
               
               
               Alignm E-value:7e-27
               
               
               Alignm gaps (pig, cow):206, 78

               
               
               Conread position:451-785
               
               
               Cow position:chr14:8495230-8495578 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:358
               
               
               Alignm identity:239
               
               
               Alignm E-value:2e-25
               
               
               Alignm gaps (pig, cow):146, 75

               
               
               Conread position:452-702
               
               
               Cow position:chr14:26880728-26880482 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:256
               
               
               Alignm identity:176
               
               
               Alignm E-value:6e-26
               
               
               Alignm gaps (pig, cow):147, 91

               
               
               Conread position:452-718
               
               
               Cow position:chr14:12484221-12483972 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:270
               
               
               Alignm identity:192
               
               
               Alignm E-value:1e-29
               
               
               Alignm gaps (pig, cow):147, 83

               
               
               Conread position:454-713
               
               
               Cow position:chr14:19633260-19633515 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:265
               
               
               Alignm identity:183
               
               
               Alignm E-value:3e-29
               
               
               Alignm gaps (pig, cow):145, 75

               
               
               Conread position:456-684
               
               
               Cow position:chr14:42918172-42918393 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:232
               
               
               Alignm identity:163
               
               
               Alignm E-value:2e-25
               
               
               Alignm gaps (pig, cow):92, 64

               
               
               Conread position:457-718
               
               
               Cow position:chr14:46735388-46735656 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:274
               
               
               Alignm identity:198
               
               
               Alignm E-value:2e-37
               
               
               Alignm gaps (pig, cow):54, 74

               
               
               Conread position:458-713
               
               
               Cow position:chr14:5502077-5501817 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:262
               
               
               Alignm identity:201
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):91, 68

               
               
               Conread position:458-713
               
               
               Cow position:chr14:17013589-17013843 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:262
               
               
               Alignm identity:190
               
               
               Alignm E-value:7e-38
               
               
               Alignm gaps (pig, cow):90, 80

               
               
               Conread position:459-663
               
               
               Cow position:chr14:6234181-6233982 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:208
               
               
               Alignm identity:148
               
               
               Alignm E-value:5e-24
               
               
               Alignm gaps (pig, cow):121, 21

               
               
               Conread position:459-667
               
               
               Cow position:chr14:19996402-19996603 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:211
               
               
               Alignm identity:155
               
               
               Alignm E-value:1e-29
               
               
               Alignm gaps (pig, cow):27, 12

               
               
               Conread position:460-706
               
               
               Cow position:chr14:39518782-39519023 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:253
               
               
               Alignm identity:185
               
               
               Alignm E-value:5e-35
               
               
               Alignm gaps (pig, cow):94, 10

               
               
               Conread position:462-684
               
               
               Cow position:chr14:8006238-8006037 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:223
               
               
               Alignm identity:164
               
               
               Alignm E-value:7e-27
               
               
               Alignm gaps (pig, cow):81, 0

               
               
               Conread position:471-707
               
               
               Cow position:chr14:11641472-11641247 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:242
               
               
               Alignm identity:179
               
               
               Alignm E-value:3e-30
               
               
               Alignm gaps (pig, cow):128, 55

               
               
               Conread position:475-696
               
               
               Cow position:chr14:16310803-16310596 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:224
               
               
               Alignm identity:163
               
               
               Alignm E-value:7e-27
               
               
               Alignm gaps (pig, cow):94, 54

               
               
               Conread position:477-669
               
               
               Cow position:chr14:41716207-41716394 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:197
               
               
               Alignm identity:144
               
               
               Alignm E-value:5e-24
               
               
               Alignm gaps (pig, cow):23, 54

               
               
               Conread position:483-698
               
               
               Cow position:chr14:21534926-21534724 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:217
               
               
               Alignm identity:166
               
               
               Alignm E-value:5e-34
               
               
               Alignm gaps (pig, cow):14, 47

               
               
               Conread position:485-718
               
               
               Cow position:chr14:46074694-46074925 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:241
               
               
               Alignm identity:170
               
               
               Alignm E-value:2e-25
               
               
               Alignm gaps (pig, cow):75, 101

               
               
               Conread position:486-797
               
               
               Cow position:chr14:25695493-25695813 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:332
               
               
               Alignm identity:241
               
               
               Alignm E-value:1.00053e-42
               
               
               Alignm gaps (pig, cow):62, 42

               
               
               Conread position:488-718
               
               
               Cow position:chr14:30926817-30927032 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:233
               
               
               Alignm identity:163
               
               
               Alignm E-value:4e-21
               
               
               Alignm gaps (pig, cow):82, 40

               
               
               Conread position:489-713
               
               
               Cow position:chr14:27866022-27865803 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:232
               
               
               Alignm identity:169
               
               
               Alignm E-value:8e-28
               
               
               Alignm gaps (pig, cow):75, 39

               
               
               Conread position:496-699
               
               
               Cow position:chr14:45068967-45068767 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:209
               
               
               Alignm identity:152
               
               
               Alignm E-value:7e-27
               
               
               Alignm gaps (pig, cow):95, 33

               
               
               Conread position:498-713
               
               
               Cow position:chr14:36775730-36775935 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:222
               
               
               Alignm identity:162
               
               
               Alignm E-value:2e-24
               
               
               Alignm gaps (pig, cow):50, 31

               
               
               Conread position:590-784
               
               
               Cow position:chr14:13427026-13427230 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:208
               
               
               Alignm identity:151
               
               
               Alignm E-value:2e-23
               
               
               Alignm gaps (pig, cow):13, 48
Show alignments to all cow chromosomes.