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Cow genome map

           
Conread name:
           
LyN1-MLN01F030047
        

               
Conread position:
               
189-391
               

               
Cow position:
               
chr17:23257448-23257639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
148, 34
               

               
Conread position:
               
189-722
               

               
Cow position:
               
chr17:13922749-13922218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
546
               

               
Alignm identity:
               
385
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 9
               

               
Conread position:
               
190-698
               

               
Cow position:
               
chr17:20848796-20848295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
528
               

               
Alignm identity:
               
385
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 211
               

               
Conread position:
               
193-386
               

               
Cow position:
               
chr17:8931507-8931697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
102, 6
               

               
Conread position:
               
193-386
               

               
Cow position:
               
chr17:26554778-26554587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
142, 29
               

               
Conread position:
               
195-477
               

               
Cow position:
               
chr17:12091570-12091845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
114, 0
               

               
Conread position:
               
199-533
               

               
Cow position:
               
chr17:25616507-25616182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
16, 91
               

               
Conread position:
               
200-409
               

               
Cow position:
               
chr17:15883937-15883714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
10, 208
               

               
Conread position:
               
200-503
               

               
Cow position:
               
chr17:25467250-25466920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
49, 213
               

               
Conread position:
               
200-713
               

               
Cow position:
               
chr17:32989732-32989242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
526
               

               
Alignm identity:
               
374
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 48
               

               
Conread position:
               
201-296
               

               
Cow position:
               
chr17:25718400-25718305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
96
               

               
Alignm identity:
               
80
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
201-334
               

               
Cow position:
               
chr17:11920772-11920908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
202-335
               

               
Cow position:
               
chr17:22223969-22223837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
202-686
               

               
Cow position:
               
chr17:15684759-15684281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
500
               

               
Alignm identity:
               
371
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
135, 50
               

               
Conread position:
               
203-410
               

               
Cow position:
               
chr17:12214997-12215216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
21, 185
               

               
Conread position:
               
204-335
               

               
Cow position:
               
chr17:7865079-7864946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
204-533
               

               
Cow position:
               
chr17:17193747-17193417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 172
               

               
Conread position:
               
204-536
               

               
Cow position:
               
chr17:11584744-11584424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
233, 106
               

               
Conread position:
               
205-433
               

               
Cow position:
               
chr17:21015240-21014999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
84, 67
               

               
Conread position:
               
205-438
               

               
Cow position:
               
chr17:12556803-12556586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
205-629
               

               
Cow position:
               
chr17:12306148-12306559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
138, 25
               

               
Conread position:
               
205-665
               

               
Cow position:
               
chr17:21434475-21434928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 184
               

               
Conread position:
               
205-685
               

               
Cow position:
               
chr17:41289791-41290240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
398, 132
               

               
Conread position:
               
206-389
               

               
Cow position:
               
chr17:10825728-10825541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
131, 54
               

               
Conread position:
               
206-713
               

               
Cow position:
               
chr17:4611813-4612327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
538
               

               
Alignm identity:
               
367
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 28
               

               
Conread position:
               
207-430
               

               
Cow position:
               
chr17:20929497-20929263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
13, 201
               

               
Conread position:
               
207-479
               

               
Cow position:
               
chr17:9940945-9940660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
86, 41
               

               
Conread position:
               
207-488
               

               
Cow position:
               
chr17:4699460-4699751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
88, 118
               

               
Conread position:
               
207-578
               

               
Cow position:
               
chr17:29026325-29025939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 16
               

               
Conread position:
               
207-713
               

               
Cow position:
               
chr17:11277774-11278273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
523
               

               
Alignm identity:
               
370
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 41
               

               
Conread position:
               
207-783
               

               
Cow position:
               
chr17:37414670-37415214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
583
               

               
Alignm identity:
               
369
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
17, 48
               

               
Conread position:
               
208-333
               

               
Cow position:
               
chr17:7554015-7554140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
23, 92
               

               
Conread position:
               
208-339
               

               
Cow position:
               
chr17:10820738-10820867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
208-380
               

               
Cow position:
               
chr17:12201042-12200863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
58, 90
               

               
Conread position:
               
208-391
               

               
Cow position:
               
chr17:20913358-20913169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
131, 0
               

               
Conread position:
               
208-504
               

               
Cow position:
               
chr17:21039806-21039516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
126, 191
               

               
Conread position:
               
208-505
               

               
Cow position:
               
chr17:25126594-25126303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
129, 88
               

               
Conread position:
               
208-515
               

               
Cow position:
               
chr17:5372282-5372588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
126, 89
               

               
Conread position:
               
208-519
               

               
Cow position:
               
chr17:44107920-44108215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
138, 15
               

               
Conread position:
               
208-534
               

               
Cow position:
               
chr17:21489384-21489701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 42
               

               
Conread position:
               
208-713
               

               
Cow position:
               
chr17:11381475-11381966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
519
               

               
Alignm identity:
               
363
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 238
               

               
Conread position:
               
208-718
               

               
Cow position:
               
chr17:11036163-11035667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
528
               

               
Alignm identity:
               
360
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 197
               

               
Conread position:
               
208-718
               

               
Cow position:
               
chr17:42419955-42419484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
522
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
86, 42
               

               
Conread position:
               
209-328
               

               
Cow position:
               
chr17:44797928-44797805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
209-335
               

               
Cow position:
               
chr17:8809259-8809383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
209-335
               

               
Cow position:
               
chr17:20887273-20887141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
209-377
               

               
Cow position:
               
chr17:5048179-5048003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
92, 32
               

               
Conread position:
               
209-378
               

               
Cow position:
               
chr17:36943612-36943441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
128, 88
               

               
Conread position:
               
209-384
               

               
Cow position:
               
chr17:33288242-33288413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
89, 62
               

               
Conread position:
               
209-386
               

               
Cow position:
               
chr17:19543982-19544169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
14, 97
               

               
Conread position:
               
209-390
               

               
Cow position:
               
chr17:3387968-3387777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
83, 110
               

               
Conread position:
               
209-391
               

               
Cow position:
               
chr17:42780070-42780266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
209-394
               

               
Cow position:
               
chr17:9077963-9078165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
209-394
               

               
Cow position:
               
chr17:19471523-19471715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
14, 87
               

               
Conread position:
               
209-394
               

               
Cow position:
               
chr17:44798692-44798883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
209-395
               

               
Cow position:
               
chr17:6761605-6761793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
120, 86
               

               
Conread position:
               
209-401
               

               
Cow position:
               
chr17:25121999-25122195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
125, 47
               

               
Conread position:
               
209-404
               

               
Cow position:
               
chr17:6787189-6786982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
209-409
               

               
Cow position:
               
chr17:34768204-34768414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
86, 196
               

               
Conread position:
               
209-410
               

               
Cow position:
               
chr17:41616988-41616777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
81, 196
               

               
Conread position:
               
209-411
               

               
Cow position:
               
chr17:20234445-20234252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
131, 43
               

               
Conread position:
               
209-411
               

               
Cow position:
               
chr17:25474883-25474673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
86, 40
               

               
Conread position:
               
209-420
               

               
Cow position:
               
chr17:10508185-10508402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
73, 34
               

               
Conread position:
               
209-429
               

               
Cow position:
               
chr17:12248984-12249206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
81, 182
               

               
Conread position:
               
209-431
               

               
Cow position:
               
chr17:18673788-18674008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
83, 162
               

               
Conread position:
               
209-431
               

               
Cow position:
               
chr17:27292205-27292436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
72, 194
               

               
Conread position:
               
209-436
               

               
Cow position:
               
chr17:21718746-21718980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
11, 196
               

               
Conread position:
               
209-439
               

               
Cow position:
               
chr17:9509744-9509982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
14, 48
               

               
Conread position:
               
209-439
               

               
Cow position:
               
chr17:26072510-26072748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 21
               

               
Conread position:
               
209-440
               

               
Cow position:
               
chr17:3468000-3467765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
125, 190
               

               
Conread position:
               
209-440
               

               
Cow position:
               
chr17:17035194-17034961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
125, 14
               

               
Conread position:
               
209-442
               

               
Cow position:
               
chr17:18810810-18811045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
98, 186
               

               
Conread position:
               
209-444
               

               
Cow position:
               
chr17:7959429-7959188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
12, 182
               

               
Conread position:
               
209-445
               

               
Cow position:
               
chr17:30168988-30169229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
98, 40
               

               
Conread position:
               
209-466
               

               
Cow position:
               
chr17:19783305-19783048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
80, 184
               

               
Conread position:
               
209-471
               

               
Cow position:
               
chr17:8815438-8815175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
11, 69
               

               
Conread position:
               
209-474
               

               
Cow position:
               
chr17:29995186-29995456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
100, 198
               

               
Conread position:
               
209-476
               

               
Cow position:
               
chr17:4264475-4264202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
92, 195
               

               
Conread position:
               
209-478
               

               
Cow position:
               
chr17:40383957-40384226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
75, 194
               

               
Conread position:
               
209-495
               

               
Cow position:
               
chr17:28982427-28982140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
24, 157
               

               
Conread position:
               
209-499
               

               
Cow position:
               
chr17:25800635-25800925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
125, 180
               

               
Conread position:
               
209-500
               

               
Cow position:
               
chr17:35193568-35193871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
76, 199
               

               
Conread position:
               
209-501
               

               
Cow position:
               
chr17:33154909-33155200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
125, 91
               

               
Conread position:
               
209-509
               

               
Cow position:
               
chr17:31465010-31465303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
8, 88
               

               
Conread position:
               
209-513
               

               
Cow position:
               
chr17:7590207-7590514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
36, 203
               

               
Conread position:
               
209-519
               

               
Cow position:
               
chr17:36275586-36275275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
15, 44
               

               
Conread position:
               
209-521
               

               
Cow position:
               
chr17:1025586-1025885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
128, 14
               

               
Conread position:
               
209-524
               

               
Cow position:
               
chr17:36814614-36814292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 199
               

               
Conread position:
               
209-527
               

               
Cow position:
               
chr17:21325593-21325262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
78, 206
               

               
Conread position:
               
209-533
               

               
Cow position:
               
chr17:21744187-21743861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 76
               

               
Conread position:
               
209-572
               

               
Cow position:
               
chr17:1634246-1634606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
125, 14
               

               
Conread position:
               
209-577
               

               
Cow position:
               
chr17:7802923-7803295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 194
               

               
Conread position:
               
209-583
               

               
Cow position:
               
chr17:25118136-25117763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
93, 189
               

               
Conread position:
               
209-585
               

               
Cow position:
               
chr17:11962286-11962681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
89, 16
               

               
Conread position:
               
209-586
               

               
Cow position:
               
chr17:27058300-27058682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 200
               

               
Conread position:
               
209-588
               

               
Cow position:
               
chr17:17682665-17683029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 88
               

               
Conread position:
               
209-601
               

               
Cow position:
               
chr17:40673622-40673252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 191
               

               
Conread position:
               
209-625
               

               
Cow position:
               
chr17:28468373-28467977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
84, 170
               

               
Conread position:
               
209-634
               

               
Cow position:
               
chr17:4105743-4106154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
82, 36
               

               
Conread position:
               
209-634
               

               
Cow position:
               
chr17:4121478-4121890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
82, 36
               

               
Conread position:
               
209-646
               

               
Cow position:
               
chr17:12946111-12946546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 14
               

               
Conread position:
               
209-654
               

               
Cow position:
               
chr17:25612337-25611905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 89
               

               
Conread position:
               
209-661
               

               
Cow position:
               
chr17:12447154-12447593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 14
               

               
Conread position:
               
209-661
               

               
Cow position:
               
chr17:33275510-33275941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 76
               

               
Conread position:
               
209-667
               

               
Cow position:
               
chr17:30713595-30713152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
88, 99
               

               
Conread position:
               
209-685
               

               
Cow position:
               
chr17:20157857-20157394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 158
               

               
Conread position:
               
209-688
               

               
Cow position:
               
chr17:23246435-23245991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
347, 34
               

               
Conread position:
               
209-689
               

               
Cow position:
               
chr17:11831869-11832363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
502
               

               
Alignm identity:
               
369
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 90
               

               
Conread position:
               
209-699
               

               
Cow position:
               
chr17:29292141-29292606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
503
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
129, 90
               

               
Conread position:
               
209-709
               

               
Cow position:
               
chr17:25815845-25815361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
512
               

               
Alignm identity:
               
377
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 138
               

               
Conread position:
               
209-710
               

               
Cow position:
               
chr17:27795904-27795400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
522
               

               
Alignm identity:
               
402
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 98
               

               
Conread position:
               
209-713
               

               
Cow position:
               
chr17:9854231-9853735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
526
               

               
Alignm identity:
               
364
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 108
               

               
Conread position:
               
209-713
               

               
Cow position:
               
chr17:14033391-14033898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
524
               

               
Alignm identity:
               
378
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 193
               

               
Conread position:
               
209-713
               

               
Cow position:
               
chr17:21972879-21973382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
521
               

               
Alignm identity:
               
372
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 16
               

               
Conread position:
               
209-713
               

               
Cow position:
               
chr17:32993378-32993864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
516
               

               
Alignm identity:
               
371
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 38
               

               
Conread position:
               
209-714
               

               
Cow position:
               
chr17:29714965-29715438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
513
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
128, 40
               

               
Conread position:
               
209-717
               

               
Cow position:
               
chr17:10528481-10528995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
527
               

               
Alignm identity:
               
368
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 189
               

               
Conread position:
               
209-718
               

               
Cow position:
               
chr17:14025662-14026170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
527
               

               
Alignm identity:
               
389
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 16
               

               
Conread position:
               
209-718
               

               
Cow position:
               
chr17:40772080-40771573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
525
               

               
Alignm identity:
               
386
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 174
               

               
Conread position:
               
209-722
               

               
Cow position:
               
chr17:21292789-21293305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
538
               

               
Alignm identity:
               
391
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 41
               

               
Conread position:
               
209-784
               

               
Cow position:
               
chr17:11101568-11102131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
597
               

               
Alignm identity:
               
439
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 90
               

               
Conread position:
               
209-797
               

               
Cow position:
               
chr17:32138168-32138758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
617
               

               
Alignm identity:
               
407
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 21
               

               
Conread position:
               
210-331
               

               
Cow position:
               
chr17:39904724-39904599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
210-338
               

               
Cow position:
               
chr17:4271111-4271244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
210-340
               

               
Cow position:
               
chr17:24612891-24612767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
210-370
               

               
Cow position:
               
chr17:43970908-43971073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
24, 41
               

               
Conread position:
               
210-387
               

               
Cow position:
               
chr17:21236773-21236585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
210-390
               

               
Cow position:
               
chr17:10221959-10222150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
210-391
               

               
Cow position:
               
chr17:21181702-21181510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
210-391
               

               
Cow position:
               
chr17:43323294-43323486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
210-394
               

               
Cow position:
               
chr17:3346449-3346629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
114, 35
               

               
Conread position:
               
210-394
               

               
Cow position:
               
chr17:6268629-6268824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
210-397
               

               
Cow position:
               
chr17:33140633-33140435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
210-403
               

               
Cow position:
               
chr17:16438471-16438672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
73, 19
               

               
Conread position:
               
210-405
               

               
Cow position:
               
chr17:37552776-37552980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
82, 193
               

               
Conread position:
               
210-408
               

               
Cow position:
               
chr17:3320385-3320192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
88, 40
               

               
Conread position:
               
210-408
               

               
Cow position:
               
chr17:26225276-26225071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
67, 62
               

               
Conread position:
               
210-409
               

               
Cow position:
               
chr17:21076021-21075814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
88, 108
               

               
Conread position:
               
210-422
               

               
Cow position:
               
chr17:13414117-13414338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
88, 193
               

               
Conread position:
               
210-439
               

               
Cow position:
               
chr17:25725129-25724897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
88, 24
               

               
Conread position:
               
210-440
               

               
Cow position:
               
chr17:25473035-25473267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
129, 11
               

               
Conread position:
               
210-440
               

               
Cow position:
               
chr17:25930301-25930527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
28, 44
               

               
Conread position:
               
210-440
               

               
Cow position:
               
chr17:29245679-29245455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
130, 18
               

               
Conread position:
               
210-442
               

               
Cow position:
               
chr17:21466010-21466257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
90, 198
               

               
Conread position:
               
210-443
               

               
Cow position:
               
chr17:20904858-20905090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 75
               

               
Conread position:
               
210-443
               

               
Cow position:
               
chr17:21863907-21863665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
85, 98
               

               
Conread position:
               
210-454
               

               
Cow position:
               
chr17:43315042-43315288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
97, 50
               

               
Conread position:
               
210-456
               

               
Cow position:
               
chr17:37857441-37857696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
78, 194
               

               
Conread position:
               
210-476
               

               
Cow position:
               
chr17:10023302-10023034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
85, 13
               

               
Conread position:
               
210-476
               

               
Cow position:
               
chr17:25886080-25885801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
88, 190
               

               
Conread position:
               
210-478
               

               
Cow position:
               
chr17:25584492-25584217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 183
               

               
Conread position:
               
210-489
               

               
Cow position:
               
chr17:8516333-8516621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
74, 199
               

               
Conread position:
               
210-489
               

               
Cow position:
               
chr17:36432147-36431859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
82, 193
               

               
Conread position:
               
210-497
               

               
Cow position:
               
chr17:12325522-12325807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
124, 73
               

               
Conread position:
               
210-505
               

               
Cow position:
               
chr17:27549246-27548951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
204, 127
               

               
Conread position:
               
210-526
               

               
Cow position:
               
chr17:27730794-27730470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 245
               

               
Conread position:
               
210-533
               

               
Cow position:
               
chr17:1469614-1469300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 74
               

               
Conread position:
               
210-534
               

               
Cow position:
               
chr17:36178802-36179098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
98, 45
               

               
Conread position:
               
210-536
               

               
Cow position:
               
chr17:8597861-8598185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 195
               

               
Conread position:
               
210-541
               

               
Cow position:
               
chr17:18934505-18934169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
9, 36
               

               
Conread position:
               
210-550
               

               
Cow position:
               
chr17:34772754-34772403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
82, 14
               

               
Conread position:
               
210-578
               

               
Cow position:
               
chr17:20884773-20884398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 39
               

               
Conread position:
               
210-583
               

               
Cow position:
               
chr17:5143928-5144297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 15
               

               
Conread position:
               
210-629
               

               
Cow position:
               
chr17:34650711-34650280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
85, 197
               

               
Conread position:
               
210-643
               

               
Cow position:
               
chr17:24149437-24149000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 199
               

               
Conread position:
               
210-652
               

               
Cow position:
               
chr17:36454530-36454950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
83, 183
               

               
Conread position:
               
210-657
               

               
Cow position:
               
chr17:3202163-3202592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
85, 190
               

               
Conread position:
               
210-661
               

               
Cow position:
               
chr17:26000367-25999921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 176
               

               
Conread position:
               
210-664
               

               
Cow position:
               
chr17:1256250-1256702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 110
               

               
Conread position:
               
210-667
               

               
Cow position:
               
chr17:1035346-1035805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 197
               

               
Conread position:
               
210-672
               

               
Cow position:
               
chr17:21599432-21599889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
93, 199
               

               
Conread position:
               
210-694
               

               
Cow position:
               
chr17:29472705-29472243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
496
               

               
Alignm identity:
               
363
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 42
               

               
Conread position:
               
210-698
               

               
Cow position:
               
chr17:31480783-31481278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
517
               

               
Alignm identity:
               
380
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 13
               

               
Conread position:
               
210-702
               

               
Cow position:
               
chr17:38615209-38614716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
509
               

               
Alignm identity:
               
372
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 13
               

               
Conread position:
               
210-708
               

               
Cow position:
               
chr17:11618836-11618334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
517
               

               
Alignm identity:
               
386
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 183
               

               
Conread position:
               
210-713
               

               
Cow position:
               
chr17:6156281-6155790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
519
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 49
               

               
Conread position:
               
210-713
               

               
Cow position:
               
chr17:11839971-11839450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
527
               

               
Alignm identity:
               
397
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 249
               

               
Conread position:
               
210-713
               

               
Cow position:
               
chr17:17059665-17059189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
516
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
129, 13
               

               
Conread position:
               
210-713
               

               
Cow position:
               
chr17:18490781-18490285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
510
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 180
               

               
Conread position:
               
210-713
               

               
Cow position:
               
chr17:21959435-21959930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
521
               

               
Alignm identity:
               
393
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 200
               

               
Conread position:
               
210-713
               

               
Cow position:
               
chr17:22775616-22775141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
520
               

               
Alignm identity:
               
360
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
125, 11
               

               
Conread position:
               
210-713
               

               
Cow position:
               
chr17:32027200-32027713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
523
               

               
Alignm identity:
               
391
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 13
               

               
Conread position:
               
210-718
               

               
Cow position:
               
chr17:17180293-17179785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
536
               

               
Alignm identity:
               
395
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 52
               

               
Conread position:
               
210-718
               

               
Cow position:
               
chr17:20092881-20093379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
525
               

               
Alignm identity:
               
369
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 187
               

               
Conread position:
               
210-718
               

               
Cow position:
               
chr17:24077635-24077151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
522
               

               
Alignm identity:
               
385
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 40
               

               
Conread position:
               
210-719
               

               
Cow position:
               
chr17:15664924-15664413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
525
               

               
Alignm identity:
               
389
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 107
               

               
Conread position:
               
210-722
               

               
Cow position:
               
chr17:25875643-25875149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
533
               

               
Alignm identity:
               
377
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 96
               

               
Conread position:
               
211-340
               

               
Cow position:
               
chr17:35935408-35935276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
211-361
               

               
Cow position:
               
chr17:41144139-41144288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
127, 68
               

               
Conread position:
               
211-378
               

               
Cow position:
               
chr17:6767011-6767189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
31, 12
               

               
Conread position:
               
211-385
               

               
Cow position:
               
chr17:11269527-11269709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
77, 175
               

               
Conread position:
               
211-385
               

               
Cow position:
               
chr17:35922140-35921951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
211-394
               

               
Cow position:
               
chr17:6317859-6318047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
12, 74
               

               
Conread position:
               
211-394
               

               
Cow position:
               
chr17:36573872-36574067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
211-400
               

               
Cow position:
               
chr17:26720955-26721155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
211-402
               

               
Cow position:
               
chr17:11920916-11921119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
81, 12
               

               
Conread position:
               
211-409
               

               
Cow position:
               
chr17:26836518-26836724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
84, 60
               

               
Conread position:
               
211-436
               

               
Cow position:
               
chr17:5780238-5780004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
98, 192
               

               
Conread position:
               
211-439
               

               
Cow position:
               
chr17:32143335-32143102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
83, 14
               

               
Conread position:
               
211-441
               

               
Cow position:
               
chr17:1463081-1463319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
84, 192
               

               
Conread position:
               
211-476
               

               
Cow position:
               
chr17:5421928-5421655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
73, 192
               

               
Conread position:
               
211-476
               

               
Cow position:
               
chr17:33164573-33164837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
101, 90
               

               
Conread position:
               
211-488
               

               
Cow position:
               
chr17:35149282-35149560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 12
               

               
Conread position:
               
211-498
               

               
Cow position:
               
chr17:16078156-16078444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
13, 125
               

               
Conread position:
               
211-504
               

               
Cow position:
               
chr17:23280610-23280905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
128, 60
               

               
Conread position:
               
211-504
               

               
Cow position:
               
chr17:37523193-37522896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
84, 192
               

               
Conread position:
               
211-508
               

               
Cow position:
               
chr17:22051344-22051644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
123, 191
               

               
Conread position:
               
211-513
               

               
Cow position:
               
chr17:9770752-9770454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 173
               

               
Conread position:
               
211-514
               

               
Cow position:
               
chr17:11289268-11289562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
41, 185
               

               
Conread position:
               
211-528
               

               
Cow position:
               
chr17:3153321-3153643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
75, 198
               

               
Conread position:
               
211-532
               

               
Cow position:
               
chr17:32349309-32348997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 12
               

               
Conread position:
               
211-586
               

               
Cow position:
               
chr17:26233580-26233959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
84, 192
               

               
Conread position:
               
211-654
               

               
Cow position:
               
chr17:908985-908558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 12
               

               
Conread position:
               
211-664
               

               
Cow position:
               
chr17:24490788-24490323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 38
               

               
Conread position:
               
211-680
               

               
Cow position:
               
chr17:21738618-21739102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
368
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 198
               

               
Conread position:
               
211-689
               

               
Cow position:
               
chr17:24786778-24787248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 236
               

               
Conread position:
               
211-698
               

               
Cow position:
               
chr17:18720206-18720684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
500
               

               
Alignm identity:
               
379
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 12
               

               
Conread position:
               
211-712
               

               
Cow position:
               
chr17:12289164-12289669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
524
               

               
Alignm identity:
               
383
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 12
               

               
Conread position:
               
211-713
               

               
Cow position:
               
chr17:23063969-23063463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
525
               

               
Alignm identity:
               
371
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 168
               

               
Conread position:
               
211-713
               

               
Cow position:
               
chr17:24974190-24973699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
521
               

               
Alignm identity:
               
362
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 86
               

               
Conread position:
               
211-713
               

               
Cow position:
               
chr17:33271425-33271924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
528
               

               
Alignm identity:
               
387
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
131, 10
               

               
Conread position:
               
211-713
               

               
Cow position:
               
chr17:39412257-39412749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
515
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
84, 157
               

               
Conread position:
               
211-722
               

               
Cow position:
               
chr17:14049963-14050452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
525
               

               
Alignm identity:
               
374
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 41
               

               
Conread position:
               
211-737
               

               
Cow position:
               
chr17:37163298-37163803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
535
               

               
Alignm identity:
               
372
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
350, 111
               

               
Conread position:
               
211-797
               

               
Cow position:
               
chr17:6936431-6937018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
623
               

               
Alignm identity:
               
436
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 152
               

               
Conread position:
               
212-335
               

               
Cow position:
               
chr17:7659351-7659482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
83, 34
               

               
Conread position:
               
212-383
               

               
Cow position:
               
chr17:20836336-20836158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
93, 163
               

               
Conread position:
               
212-390
               

               
Cow position:
               
chr17:7711682-7711497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
81, 98
               

               
Conread position:
               
212-391
               

               
Cow position:
               
chr17:1081454-1081263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
212-406
               

               
Cow position:
               
chr17:3364835-3364635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
124, 86
               

               
Conread position:
               
212-418
               

               
Cow position:
               
chr17:10414739-10414532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
122, 84
               

               
Conread position:
               
212-440
               

               
Cow position:
               
chr17:29084412-29084186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
122, 11
               

               
Conread position:
               
212-441
               

               
Cow position:
               
chr17:40276987-40276751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
24, 34
               

               
Conread position:
               
212-442
               

               
Cow position:
               
chr17:40355507-40355268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 191
               

               
Conread position:
               
212-445
               

               
Cow position:
               
chr17:5288410-5288174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
125, 186
               

               
Conread position:
               
212-476
               

               
Cow position:
               
chr17:32332848-32333112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
82, 9
               

               
Conread position:
               
212-498
               

               
Cow position:
               
chr17:6318621-6318909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
11, 188
               

               
Conread position:
               
212-523
               

               
Cow position:
               
chr17:40639193-40638883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
82, 40
               

               
Conread position:
               
212-525
               

               
Cow position:
               
chr17:26448789-26448473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 189
               

               
Conread position:
               
212-528
               

               
Cow position:
               
chr17:33793397-33793092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
122, 11
               

               
Conread position:
               
212-532
               

               
Cow position:
               
chr17:25709961-25709628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
82, 241
               

               
Conread position:
               
212-533
               

               
Cow position:
               
chr17:9824912-9824592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 11
               

               
Conread position:
               
212-535
               

               
Cow position:
               
chr17:34790819-34791147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
131, 183
               

               
Conread position:
               
212-536
               

               
Cow position:
               
chr17:17940633-17940325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
84, 188
               

               
Conread position:
               
212-538
               

               
Cow position:
               
chr17:9056453-9056783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
129, 124
               

               
Conread position:
               
212-583
               

               
Cow position:
               
chr17:24928724-24928349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 195
               

               
Conread position:
               
212-583
               

               
Cow position:
               
chr17:31037131-31037510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
83, 29
               

               
Conread position:
               
212-667
               

               
Cow position:
               
chr17:25128108-25128550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 187
               

               
Conread position:
               
212-686
               

               
Cow position:
               
chr17:17410546-17410074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 200
               

               
Conread position:
               
212-689
               

               
Cow position:
               
chr17:38362768-38363209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
374, 11
               

               
Conread position:
               
212-698
               

               
Cow position:
               
chr17:11215647-11216119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
499
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 114
               

               
Conread position:
               
212-713
               

               
Cow position:
               
chr17:924109-923629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
509
               

               
Alignm identity:
               
364
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 17
               

               
Conread position:
               
212-713
               

               
Cow position:
               
chr17:25189533-25189032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
520
               

               
Alignm identity:
               
374
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 29
               

               
Conread position:
               
212-713
               

               
Cow position:
               
chr17:40332023-40331518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
527
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
78, 9
               

               
Conread position:
               
212-795
               

               
Cow position:
               
chr17:26818228-26818791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
596
               

               
Alignm identity:
               
422
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
332, 9
               

               
Conread position:
               
212-796
               

               
Cow position:
               
chr17:15102643-15103237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
623
               

               
Alignm identity:
               
426
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 196
               

               
Conread position:
               
213-365
               

               
Cow position:
               
chr17:243366-243217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
128, 66
               

               
Conread position:
               
213-373
               

               
Cow position:
               
chr17:15103498-15103663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
120, 10
               

               
Conread position:
               
213-387
               

               
Cow position:
               
chr17:21363629-21363444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
9, 40
               

               
Conread position:
               
213-388
               

               
Cow position:
               
chr17:36467943-36468129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
89, 53
               

               
Conread position:
               
213-394
               

               
Cow position:
               
chr17:6978931-6979121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
76, 25
               

               
Conread position:
               
213-405
               

               
Cow position:
               
chr17:11055922-11056114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
127, 90
               

               
Conread position:
               
213-409
               

               
Cow position:
               
chr17:20306578-20306369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
85, 166
               

               
Conread position:
               
213-442
               

               
Cow position:
               
chr17:9935558-9935797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
18, 196
               

               
Conread position:
               
213-443
               

               
Cow position:
               
chr17:15355179-15354940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
79, 190
               

               
Conread position:
               
213-471
               

               
Cow position:
               
chr17:25511487-25511227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
120, 96
               

               
Conread position:
               
213-514
               

               
Cow position:
               
chr17:3883497-3883805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
71, 157
               

               
Conread position:
               
213-524
               

               
Cow position:
               
chr17:39606668-39606361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
6, 38
               

               
Conread position:
               
213-530
               

               
Cow position:
               
chr17:11994775-11995105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
78, 248
               

               
Conread position:
               
213-532
               

               
Cow position:
               
chr17:22128167-22127851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 17
               

               
Conread position:
               
213-533
               

               
Cow position:
               
chr17:14652539-14652857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 36
               

               
Conread position:
               
213-534
               

               
Cow position:
               
chr17:3354114-3353804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
43, 87
               

               
Conread position:
               
213-559
               

               
Cow position:
               
chr17:31856917-31856567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 186
               

               
Conread position:
               
213-582
               

               
Cow position:
               
chr17:26631562-26631941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
65, 161
               

               
Conread position:
               
213-586
               

               
Cow position:
               
chr17:10037655-10037312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
79, 128
               

               
Conread position:
               
213-596
               

               
Cow position:
               
chr17:18202005-18201626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
72, 10
               

               
Conread position:
               
213-648
               

               
Cow position:
               
chr17:3577773-3577356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
11, 58
               

               
Conread position:
               
213-689
               

               
Cow position:
               
chr17:36791367-36790921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
88, 9
               

               
Conread position:
               
213-713
               

               
Cow position:
               
chr17:5224622-5224152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
506
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
350, 32
               

               
Conread position:
               
213-713
               

               
Cow position:
               
chr17:13940073-13940573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
520
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 186
               

               
Conread position:
               
213-713
               

               
Cow position:
               
chr17:20801059-20800565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
517
               

               
Alignm identity:
               
364
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 39
               

               
Conread position:
               
213-713
               

               
Cow position:
               
chr17:21003587-21004082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
513
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 10
               

               
Conread position:
               
213-713
               

               
Cow position:
               
chr17:33288412-33288905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
514
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 187
               

               
Conread position:
               
213-717
               

               
Cow position:
               
chr17:14004069-14003575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
525
               

               
Alignm identity:
               
381
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 90
               

               
Conread position:
               
213-722
               

               
Cow position:
               
chr17:5731163-5730664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
526
               

               
Alignm identity:
               
365
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 193
               

               
Conread position:
               
213-724
               

               
Cow position:
               
chr17:1783381-1783868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
517
               

               
Alignm identity:
               
371
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
357, 83
               

               
Conread position:
               
213-728
               

               
Cow position:
               
chr17:20032663-20033181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
538
               

               
Alignm identity:
               
370
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 186
               

               
Conread position:
               
213-783
               

               
Cow position:
               
chr17:3042703-3042148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
588
               

               
Alignm identity:
               
382
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
22, 58
               

               
Conread position:
               
214-382
               

               
Cow position:
               
chr17:30108674-30108507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
127, 69
               

               
Conread position:
               
214-414
               

               
Cow position:
               
chr17:41380273-41380466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
95, 36
               

               
Conread position:
               
214-440
               

               
Cow position:
               
chr17:4299698-4299920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
148, 114
               

               
Conread position:
               
214-440
               

               
Cow position:
               
chr17:22189674-22189448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
128, 9
               

               
Conread position:
               
214-466
               

               
Cow position:
               
chr17:16868031-16868279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
126, 81
               

               
Conread position:
               
214-504
               

               
Cow position:
               
chr17:5012085-5011801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 185
               

               
Conread position:
               
214-537
               

               
Cow position:
               
chr17:4683579-4683266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
64, 79
               

               
Conread position:
               
214-587
               

               
Cow position:
               
chr17:4786237-4786627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
42, 207
               

               
Conread position:
               
214-628
               

               
Cow position:
               
chr17:7143101-7142683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 85
               

               
Conread position:
               
214-667
               

               
Cow position:
               
chr17:27429801-27429377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 59
               

               
Conread position:
               
214-670
               

               
Cow position:
               
chr17:12109052-12108600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 182
               

               
Conread position:
               
214-680
               

               
Cow position:
               
chr17:24004617-24004177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
71, 187
               

               
Conread position:
               
214-681
               

               
Cow position:
               
chr17:11280845-11281326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
498
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 206
               

               
Conread position:
               
214-689
               

               
Cow position:
               
chr17:24587866-24587391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 9
               

               
Conread position:
               
215-340
               

               
Cow position:
               
chr17:8557383-8557507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
62, 76
               

               
Conread position:
               
215-382
               

               
Cow position:
               
chr17:40277716-40277892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
78, 93
               

               
Conread position:
               
215-394
               

               
Cow position:
               
chr17:5761906-5762099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
77, 176
               

               
Conread position:
               
215-406
               

               
Cow position:
               
chr17:19899143-19898936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
76, 190
               

               
Conread position:
               
215-409
               

               
Cow position:
               
chr17:39964120-39963920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
80, 10
               

               
Conread position:
               
215-414
               

               
Cow position:
               
chr17:10410874-10410685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
131, 37
               

               
Conread position:
               
215-418
               

               
Cow position:
               
chr17:25702847-25702634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
77, 209
               

               
Conread position:
               
215-481
               

               
Cow position:
               
chr17:7571349-7571074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 188
               

               
Conread position:
               
215-523
               

               
Cow position:
               
chr17:40250653-40250358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
219, 81
               

               
Conread position:
               
215-535
               

               
Cow position:
               
chr17:25342497-25342817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 97
               

               
Conread position:
               
215-627
               

               
Cow position:
               
chr17:25917129-25916731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 40
               

               
Conread position:
               
215-708
               

               
Cow position:
               
chr17:16371505-16371004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
518
               

               
Alignm identity:
               
382
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 61
               

               
Conread position:
               
215-709
               

               
Cow position:
               
chr17:13243811-13244273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
503
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 26
               

               
Conread position:
               
215-713
               

               
Cow position:
               
chr17:20022271-20022768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
512
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 190
               

               
Conread position:
               
215-718
               

               
Cow position:
               
chr17:17222585-17222089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
518
               

               
Alignm identity:
               
374
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 8
               

               
Conread position:
               
215-719
               

               
Cow position:
               
chr17:5898281-5898779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
525
               

               
Alignm identity:
               
367
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 243
               

               
Conread position:
               
216-374
               

               
Cow position:
               
chr17:30396546-30396396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
124, 70
               

               
Conread position:
               
216-388
               

               
Cow position:
               
chr17:26183589-26183406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
216-409
               

               
Cow position:
               
chr17:7023330-7023137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
79, 125
               

               
Conread position:
               
216-410
               

               
Cow position:
               
chr17:24987444-24987245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
121, 84
               

               
Conread position:
               
216-410
               

               
Cow position:
               
chr17:35457576-35457776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
88, 82
               

               
Conread position:
               
216-424
               

               
Cow position:
               
chr17:28465670-28465452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
7, 188
               

               
Conread position:
               
216-432
               

               
Cow position:
               
chr17:7758046-7758255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
74, 120
               

               
Conread position:
               
216-435
               

               
Cow position:
               
chr17:12342260-12342464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
216-437
               

               
Cow position:
               
chr17:42150630-42150406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
121, 86
               

               
Conread position:
               
216-441
               

               
Cow position:
               
chr17:7810505-7810744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
76, 193
               

               
Conread position:
               
216-441
               

               
Cow position:
               
chr17:24841939-24841706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
70, 35
               

               
Conread position:
               
216-441
               

               
Cow position:
               
chr17:31559813-31559580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
88, 174
               

               
Conread position:
               
216-444
               

               
Cow position:
               
chr17:34835883-34836100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
216-460
               

               
Cow position:
               
chr17:21471945-21472186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
93, 123
               

               
Conread position:
               
216-466
               

               
Cow position:
               
chr17:37340789-37341051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
90, 187
               

               
Conread position:
               
216-471
               

               
Cow position:
               
chr17:3389076-3388809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
70, 177
               

               
Conread position:
               
216-500
               

               
Cow position:
               
chr17:26513434-26513143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
7, 30
               

               
Conread position:
               
216-505
               

               
Cow position:
               
chr17:26757202-26757511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
71, 188
               

               
Conread position:
               
216-525
               

               
Cow position:
               
chr17:4723337-4723657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
74, 213
               

               
Conread position:
               
216-530
               

               
Cow position:
               
chr17:21806207-21806523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 187
               

               
Conread position:
               
216-533
               

               
Cow position:
               
chr17:11912263-11912574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
118, 85
               

               
Conread position:
               
216-586
               

               
Cow position:
               
chr17:32280910-32280536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 149
               

               
Conread position:
               
216-667
               

               
Cow position:
               
chr17:32278662-32279108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 149
               

               
Conread position:
               
216-670
               

               
Cow position:
               
chr17:29356000-29356424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
8, 70
               

               
Conread position:
               
216-689
               

               
Cow position:
               
chr17:34948879-34948413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 176
               

               
Conread position:
               
216-713
               

               
Cow position:
               
chr17:12929286-12929794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
521
               

               
Alignm identity:
               
359
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 42
               

               
Conread position:
               
216-713
               

               
Cow position:
               
chr17:16446184-16446680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
523
               

               
Alignm identity:
               
376
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 194
               

               
Conread position:
               
216-713
               

               
Cow position:
               
chr17:33933506-33933997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
516
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
22, 184
               

               
Conread position:
               
216-718
               

               
Cow position:
               
chr17:24883328-24883820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
519
               

               
Alignm identity:
               
375
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 192
               

               
Conread position:
               
216-745
               

               
Cow position:
               
chr17:5280408-5280922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
548
               

               
Alignm identity:
               
375
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 183
               

               
Conread position:
               
216-784
               

               
Cow position:
               
chr17:22564420-22563847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
593
               

               
Alignm identity:
               
432
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 49
               

               
Conread position:
               
216-797
               

               
Cow position:
               
chr17:20780767-20780158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
628
               

               
Alignm identity:
               
444
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 251
               

               
Conread position:
               
217-338
               

               
Cow position:
               
chr17:14668746-14668621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
217-388
               

               
Cow position:
               
chr17:9900144-9899965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
71, 149
               

               
Conread position:
               
217-388
               

               
Cow position:
               
chr17:18883527-18883697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
78, 55
               

               
Conread position:
               
217-389
               

               
Cow position:
               
chr17:7037378-7037563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
217-394
               

               
Cow position:
               
chr17:28795739-28795927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
217-408
               

               
Cow position:
               
chr17:15154643-15154849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
217-409
               

               
Cow position:
               
chr17:38536398-38536593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
69, 55
               

               
Conread position:
               
217-423
               

               
Cow position:
               
chr17:12019318-12019516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
70, 95
               

               
Conread position:
               
217-426
               

               
Cow position:
               
chr17:946597-946383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
117, 182
               

               
Conread position:
               
217-434
               

               
Cow position:
               
chr17:45135673-45135887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
124, 55
               

               
Conread position:
               
217-438
               

               
Cow position:
               
chr17:25587223-25587442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
107, 31
               

               
Conread position:
               
217-494
               

               
Cow position:
               
chr17:18818803-18818530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
113, 54
               

               
Conread position:
               
217-498
               

               
Cow position:
               
chr17:9932070-9932344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
85, 94
               

               
Conread position:
               
217-530
               

               
Cow position:
               
chr17:20335887-20335589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 65
               

               
Conread position:
               
217-586
               

               
Cow position:
               
chr17:18146432-18146053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
6, 189
               

               
Conread position:
               
217-628
               

               
Cow position:
               
chr17:1562550-1562936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
112, 76
               

               
Conread position:
               
217-663
               

               
Cow position:
               
chr17:10458693-10459133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 86
               

               
Conread position:
               
217-679
               

               
Cow position:
               
chr17:8836710-8837158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 27
               

               
Conread position:
               
217-709
               

               
Cow position:
               
chr17:25608276-25608753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
503
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 124
               

               
Conread position:
               
217-743
               

               
Cow position:
               
chr17:22032447-22032961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
547
               

               
Alignm identity:
               
372
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 196
               

               
Conread position:
               
217-787
               

               
Cow position:
               
chr17:24580074-24580633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
585
               

               
Alignm identity:
               
402
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
382, 14
               

               
Conread position:
               
218-330
               

               
Cow position:
               
chr17:20930543-20930432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
113
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
109, 0
               

               
Conread position:
               
218-332
               

               
Cow position:
               
chr17:3517476-3517593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
67, 16
               

               
Conread position:
               
218-391
               

               
Cow position:
               
chr17:10016517-10016338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
80, 99
               

               
Conread position:
               
218-394
               

               
Cow position:
               
chr17:32220642-32220830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
69, 101
               

               
Conread position:
               
218-408
               

               
Cow position:
               
chr17:30513771-30513963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
117, 36
               

               
Conread position:
               
218-410
               

               
Cow position:
               
chr17:32978697-32978892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
123, 70
               

               
Conread position:
               
218-425
               

               
Cow position:
               
chr17:5038815-5039020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
86, 46
               

               
Conread position:
               
218-436
               

               
Cow position:
               
chr17:4817770-4817544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
76, 170
               

               
Conread position:
               
218-442
               

               
Cow position:
               
chr17:26637616-26637849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
218-476
               

               
Cow position:
               
chr17:24119851-24120112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
76, 101
               

               
Conread position:
               
218-535
               

               
Cow position:
               
chr17:15303733-15304063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
76, 202
               

               
Conread position:
               
218-544
               

               
Cow position:
               
chr17:25513878-25514210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
87, 187
               

               
Conread position:
               
218-550
               

               
Cow position:
               
chr17:33067327-33067657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
66, 127
               

               
Conread position:
               
218-582
               

               
Cow position:
               
chr17:9965782-9966158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
71, 183
               

               
Conread position:
               
218-582
               

               
Cow position:
               
chr17:27183702-27184069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 43
               

               
Conread position:
               
218-650
               

               
Cow position:
               
chr17:20932569-20932144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 44
               

               
Conread position:
               
218-679
               

               
Cow position:
               
chr17:21243569-21244000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
381, 58
               

               
Conread position:
               
218-686
               

               
Cow position:
               
chr17:6423994-6423537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
385, 91
               

               
Conread position:
               
218-695
               

               
Cow position:
               
chr17:32418877-32419352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 184
               

               
Conread position:
               
218-700
               

               
Cow position:
               
chr17:11664337-11664826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
501
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 193
               

               
Conread position:
               
218-713
               

               
Cow position:
               
chr17:11397907-11397419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
511
               

               
Alignm identity:
               
380
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 158
               

               
Conread position:
               
219-335
               

               
Cow position:
               
chr17:3541947-3541831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
117
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
219-366
               

               
Cow position:
               
chr17:10630742-10630899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
219-384
               

               
Cow position:
               
chr17:18708378-18708545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
113, 65
               

               
Conread position:
               
219-385
               

               
Cow position:
               
chr17:42675801-42675966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
145, 103
               

               
Conread position:
               
219-387
               

               
Cow position:
               
chr17:9260372-9260550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
219-391
               

               
Cow position:
               
chr17:13976470-13976652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
219-488
               

               
Cow position:
               
chr17:9950417-9950696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
70, 233
               

               
Conread position:
               
219-586
               

               
Cow position:
               
chr17:24559532-24559170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 186
               

               
Conread position:
               
219-698
               

               
Cow position:
               
chr17:40312938-40312489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 62
               

               
Conread position:
               
219-701
               

               
Cow position:
               
chr17:44146734-44147211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
498
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 58
               

               
Conread position:
               
221-390
               

               
Cow position:
               
chr17:18775952-18776127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
102, 77
               

               
Conread position:
               
221-390
               

               
Cow position:
               
chr17:24111366-24111540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
109, 161
               

               
Conread position:
               
221-409
               

               
Cow position:
               
chr17:5344856-5344660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
61, 28
               

               
Conread position:
               
221-533
               

               
Cow position:
               
chr17:1040965-1040669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
53, 57
               

               
Conread position:
               
221-667
               

               
Cow position:
               
chr17:40741891-40741446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 235
               

               
Conread position:
               
221-713
               

               
Cow position:
               
chr17:6566721-6566225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
520
               

               
Alignm identity:
               
372
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 183
               

               
Conread position:
               
221-713
               

               
Cow position:
               
chr17:20992801-20993291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
511
               

               
Alignm identity:
               
392
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 185
               

               
Conread position:
               
221-713
               

               
Cow position:
               
chr17:25901445-25900948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
512
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 187
               

               
Conread position:
               
221-775
               

               
Cow position:
               
chr17:11296876-11296316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
575
               

               
Alignm identity:
               
405
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 68
               

               
Conread position:
               
222-338
               

               
Cow position:
               
chr17:24826847-24826967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
121
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
222-391
               

               
Cow position:
               
chr17:15334257-15334434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
70, 156
               

               
Conread position:
               
222-436
               

               
Cow position:
               
chr17:43957897-43957676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
73, 49
               

               
Conread position:
               
222-479
               

               
Cow position:
               
chr17:20199117-20199361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
222-479
               

               
Cow position:
               
chr17:38869736-38869998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
61, 166
               

               
Conread position:
               
222-525
               

               
Cow position:
               
chr17:7693306-7692995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
76, 48
               

               
Conread position:
               
222-554
               

               
Cow position:
               
chr17:22056779-22057119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
61, 19
               

               
Conread position:
               
222-583
               

               
Cow position:
               
chr17:21437077-21437448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
62, 27
               

               
Conread position:
               
222-627
               

               
Cow position:
               
chr17:21414594-21415000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
62, 27
               

               
Conread position:
               
222-665
               

               
Cow position:
               
chr17:10447149-10446717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
68, 182
               

               
Conread position:
               
222-689
               

               
Cow position:
               
chr17:32553814-32554250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 182
               

               
Conread position:
               
222-713
               

               
Cow position:
               
chr17:21114719-21115196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
503
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 180
               

               
Conread position:
               
222-713
               

               
Cow position:
               
chr17:26231201-26230688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
519
               

               
Alignm identity:
               
392
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 205
               

               
Conread position:
               
222-718
               

               
Cow position:
               
chr17:20083299-20083767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
115, 31
               

               
Conread position:
               
222-718
               

               
Cow position:
               
chr17:34596164-34595689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
361
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 51
               

               
Conread position:
               
223-390
               

               
Cow position:
               
chr17:30270302-30270479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
224-442
               

               
Cow position:
               
chr17:17772184-17772417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
70, 185
               

               
Conread position:
               
229-512
               

               
Cow position:
               
chr17:30750277-30749976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
49, 242
               

               
Conread position:
               
229-559
               

               
Cow position:
               
chr17:37699112-37699452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 20
               

               
Conread position:
               
229-652
               

               
Cow position:
               
chr17:1063397-1063003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
113, 24
               

               
Conread position:
               
229-676
               

               
Cow position:
               
chr17:32471559-32472005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 56
               

               
Conread position:
               
230-339
               

               
Cow position:
               
chr17:3918998-3918885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
114
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
230-340
               

               
Cow position:
               
chr17:22772894-22773010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
117
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
230-363
               

               
Cow position:
               
chr17:17822315-17822177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
230-373
               

               
Cow position:
               
chr17:38736659-38736515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
104, 68
               

               
Conread position:
               
230-379
               

               
Cow position:
               
chr17:25095714-25095552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
230-383
               

               
Cow position:
               
chr17:21910303-21910467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
230-389
               

               
Cow position:
               
chr17:20359344-20359173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
230-390
               

               
Cow position:
               
chr17:24767060-24767228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
230-390
               

               
Cow position:
               
chr17:36441839-36441996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
112, 60
               

               
Conread position:
               
230-398
               

               
Cow position:
               
chr17:35311747-35311585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
107, 32
               

               
Conread position:
               
230-405
               

               
Cow position:
               
chr17:12887580-12887406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
104, 26
               

               
Conread position:
               
230-410
               

               
Cow position:
               
chr17:13290945-13291131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
65, 147
               

               
Conread position:
               
230-428
               

               
Cow position:
               
chr17:21777956-21777743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
230-430
               

               
Cow position:
               
chr17:42361737-42361525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
64, 174
               

               
Conread position:
               
230-437
               

               
Cow position:
               
chr17:6005028-6004818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
62, 156
               

               
Conread position:
               
230-439
               

               
Cow position:
               
chr17:21788416-21788646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
52, 190
               

               
Conread position:
               
230-441
               

               
Cow position:
               
chr17:8986373-8986595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
49, 42
               

               
Conread position:
               
230-442
               

               
Cow position:
               
chr17:24582430-24582213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
63, 169
               

               
Conread position:
               
230-475
               

               
Cow position:
               
chr17:17044107-17044352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
104, 56
               

               
Conread position:
               
230-475
               

               
Cow position:
               
chr17:24163262-24163018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
106, 41
               

               
Conread position:
               
230-498
               

               
Cow position:
               
chr17:18267488-18267213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
65, 33
               

               
Conread position:
               
230-502
               

               
Cow position:
               
chr17:37815962-37816236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
30, 20
               

               
Conread position:
               
230-527
               

               
Cow position:
               
chr17:10431736-10432047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
64, 189
               

               
Conread position:
               
230-533
               

               
Cow position:
               
chr17:23563584-23563867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
137, 78
               

               
Conread position:
               
230-537
               

               
Cow position:
               
chr17:26789643-26789345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 33
               

               
Conread position:
               
230-547
               

               
Cow position:
               
chr17:5349895-5350209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 153
               

               
Conread position:
               
230-655
               

               
Cow position:
               
chr17:24773904-24773494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
104, 67
               

               
Conread position:
               
230-664
               

               
Cow position:
               
chr17:11362404-11361985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 83
               

               
Conread position:
               
230-666
               

               
Cow position:
               
chr17:5514985-5514559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 157
               

               
Conread position:
               
230-667
               

               
Cow position:
               
chr17:33053082-33052662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
84, 31
               

               
Conread position:
               
230-684
               

               
Cow position:
               
chr17:7132196-7132677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 191
               

               
Conread position:
               
230-695
               

               
Cow position:
               
chr17:2034727-2034312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
369, 59
               

               
Conread position:
               
230-698
               

               
Cow position:
               
chr17:28284808-28285262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
62, 20
               

               
Conread position:
               
230-713
               

               
Cow position:
               
chr17:18860516-18860969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
378
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
316, 6
               

               
Conread position:
               
230-718
               

               
Cow position:
               
chr17:43717112-43717563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
501
               

               
Alignm identity:
               
367
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 19
               

               
Conread position:
               
230-797
               

               
Cow position:
               
chr17:30529319-30529890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
602
               

               
Alignm identity:
               
431
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 63
               

               
Conread position:
               
231-394
               

               
Cow position:
               
chr17:28529082-28528913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
64, 12
               

               
Conread position:
               
231-441
               

               
Cow position:
               
chr17:27440404-27440187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
26, 157
               

               
Conread position:
               
231-533
               

               
Cow position:
               
chr17:1466189-1466506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 7
               

               
Conread position:
               
231-655
               

               
Cow position:
               
chr17:12536247-12536657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 105
               

               
Conread position:
               
231-686
               

               
Cow position:
               
chr17:5422851-5423295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 54
               

               
Conread position:
               
231-698
               

               
Cow position:
               
chr17:29080764-29080330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 17
               

               
Conread position:
               
231-713
               

               
Cow position:
               
chr17:23100995-23101458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 50
               

               
Conread position:
               
231-784
               

               
Cow position:
               
chr17:11156281-11156811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
559
               

               
Alignm identity:
               
379
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 10
               

               
Conread position:
               
232-390
               

               
Cow position:
               
chr17:20881589-20881749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
102, 17
               

               
Conread position:
               
232-390
               

               
Cow position:
               
chr17:36745829-36745985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
25, 34
               

               
Conread position:
               
232-393
               

               
Cow position:
               
chr17:5027238-5027403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
105, 0
               

               
Conread position:
               
232-398
               

               
Cow position:
               
chr17:8137628-8137458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
110, 58
               

               
Conread position:
               
232-439
               

               
Cow position:
               
chr17:24862681-24862471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 66
               

               
Conread position:
               
232-499
               

               
Cow position:
               
chr17:950201-949932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
59, 20
               

               
Conread position:
               
232-597
               

               
Cow position:
               
chr17:1114124-1113755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 183
               

               
Conread position:
               
232-612
               

               
Cow position:
               
chr17:6329338-6328962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 66
               

               
Conread position:
               
232-627
               

               
Cow position:
               
chr17:18419911-18419511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
70, 217
               

               
Conread position:
               
232-669
               

               
Cow position:
               
chr17:7437397-7436963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
34, 134
               

               
Conread position:
               
232-685
               

               
Cow position:
               
chr17:39771628-39771173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
46, 209
               

               
Conread position:
               
233-411
               

               
Cow position:
               
chr17:31754547-31754734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
59, 144
               

               
Conread position:
               
233-476
               

               
Cow position:
               
chr17:45296631-45296395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
96, 19
               

               
Conread position:
               
233-483
               

               
Cow position:
               
chr17:12959327-12959077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
22, 64
               

               
Conread position:
               
234-472
               

               
Cow position:
               
chr17:5012844-5013093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
38, 174
               

               
Conread position:
               
234-535
               

               
Cow position:
               
chr17:11215009-11215306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 21
               

               
Conread position:
               
234-540
               

               
Cow position:
               
chr17:36864847-36864547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 76
               

               
Conread position:
               
234-572
               

               
Cow position:
               
chr17:25594464-25594822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 72
               

               
Conread position:
               
237-423
               

               
Cow position:
               
chr17:43299063-43299257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
58, 165
               

               
Conread position:
               
237-470
               

               
Cow position:
               
chr17:8823544-8823295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
56, 177
               

               
Conread position:
               
238-366
               

               
Cow position:
               
chr17:20130064-20129935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
98, 55
               

               
Conread position:
               
238-584
               

               
Cow position:
               
chr17:30359676-30359344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
96, 71
               

               
Conread position:
               
238-712
               

               
Cow position:
               
chr17:2810853-2810365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
500
               

               
Alignm identity:
               
366
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 5
               

               
Conread position:
               
238-797
               

               
Cow position:
               
chr17:24752101-24752637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
571
               

               
Alignm identity:
               
375
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
55, 138
               

               
Conread position:
               
239-648
               

               
Cow position:
               
chr17:36203264-36203672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 94
               

               
Conread position:
               
239-797
               

               
Cow position:
               
chr17:13143502-13144043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
582
               

               
Alignm identity:
               
396
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
360, 39
               

               
Conread position:
               
241-441
               

               
Cow position:
               
chr17:41778677-41778469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
53, 83
               

               
Conread position:
               
246-713
               

               
Cow position:
               
chr17:34078896-34079349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
359
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 161
               

               
Conread position:
               
250-689
               

               
Cow position:
               
chr17:5768107-5767687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
84, 46
               

               
Conread position:
               
251-534
               

               
Cow position:
               
chr17:2275673-2275397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 49
               

               
Conread position:
               
254-689
               

               
Cow position:
               
chr17:12219742-12220165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
84, 35
               

               
Conread position:
               
255-437
               

               
Cow position:
               
chr17:31991142-31990948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
43, 151
               

               
Conread position:
               
255-476
               

               
Cow position:
               
chr17:27303768-27303978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
79, 20
               

               
Conread position:
               
255-669
               

               
Cow position:
               
chr17:25097656-25097260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 64
               

               
Conread position:
               
255-697
               

               
Cow position:
               
chr17:30665475-30665039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 71
               

               
Conread position:
               
256-533
               

               
Cow position:
               
chr17:45882105-45881826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
39, 7
               

               
Conread position:
               
260-709
               

               
Cow position:
               
chr17:18495321-18495754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
32, 124
               

               
Conread position:
               
260-713
               

               
Cow position:
               
chr17:1492948-1493407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 146
               

               
Conread position:
               
262-577
               

               
Cow position:
               
chr17:6848990-6848681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
34, 25
               

               
Conread position:
               
263-665
               

               
Cow position:
               
chr17:6624424-6624059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
336, 9
               

               
Conread position:
               
263-710
               

               
Cow position:
               
chr17:18108891-18109334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 63
               

               
Conread position:
               
271-525
               

               
Cow position:
               
chr17:23516759-23517011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
64, 27
               

               
Conread position:
               
277-433
               

               
Cow position:
               
chr17:25193345-25193508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
18, 124
               

               
Conread position:
               
277-531
               

               
Cow position:
               
chr17:15376774-15376532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
18, 46
               

               
Conread position:
               
277-709
               

               
Cow position:
               
chr17:1060865-1061309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
31, 183
               

               
Conread position:
               
279-532
               

               
Cow position:
               
chr17:38263321-38263563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
20, 57
               

               
Conread position:
               
280-775
               

               
Cow position:
               
chr17:17060506-17061011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
524
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 123
               

               
Conread position:
               
281-443
               

               
Cow position:
               
chr17:35334271-35334104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
53, 118
               

               
Conread position:
               
281-552
               

               
Cow position:
               
chr17:25502272-25502015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
281-713
               

               
Cow position:
               
chr17:8544479-8544057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 27
               

               
Conread position:
               
284-406
               

               
Cow position:
               
chr17:35541997-35542126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
50, 123
               

               
Conread position:
               
284-432
               

               
Cow position:
               
chr17:22074325-22074478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
53, 120
               

               
Conread position:
               
284-469
               

               
Cow position:
               
chr17:3067686-3067869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
49, 119
               

               
Conread position:
               
284-504
               

               
Cow position:
               
chr17:22016916-22017135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
56, 110
               

               
Conread position:
               
284-531
               

               
Cow position:
               
chr17:21922460-21922696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
18, 122
               

               
Conread position:
               
284-532
               

               
Cow position:
               
chr17:20874568-20874318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
51, 24
               

               
Conread position:
               
284-534
               

               
Cow position:
               
chr17:27202875-27203121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 28
               

               
Conread position:
               
284-540
               

               
Cow position:
               
chr17:34751232-34751489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
18, 112
               

               
Conread position:
               
284-545
               

               
Cow position:
               
chr17:15340579-15340840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
53, 149
               

               
Conread position:
               
284-797
               

               
Cow position:
               
chr17:38833216-38832693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
541
               

               
Alignm identity:
               
385
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 167
               

               
Conread position:
               
285-537
               

               
Cow position:
               
chr17:12880766-12880520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
57, 112
               

               
Conread position:
               
285-583
               

               
Cow position:
               
chr17:27833191-27833491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
111, 162
               

               
Conread position:
               
285-643
               

               
Cow position:
               
chr17:32273515-32273861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
58, 117
               

               
Conread position:
               
285-667
               

               
Cow position:
               
chr17:9746685-9746320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
10, 98
               

               
Conread position:
               
286-532
               

               
Cow position:
               
chr17:5250409-5250645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
56, 33
               

               
Conread position:
               
286-687
               

               
Cow position:
               
chr17:27048327-27047938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 85
               

               
Conread position:
               
286-718
               

               
Cow position:
               
chr17:8079481-8079062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 12
               

               
Conread position:
               
287-661
               

               
Cow position:
               
chr17:37481900-37482274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 118
               

               
Conread position:
               
287-713
               

               
Cow position:
               
chr17:20126767-20126370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
15, 87
               

               
Conread position:
               
287-713
               

               
Cow position:
               
chr17:25796167-25796591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 115
               

               
Conread position:
               
287-713
               

               
Cow position:
               
chr17:29157586-29157179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
47, 87
               

               
Conread position:
               
287-717
               

               
Cow position:
               
chr17:9117812-9117389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 24
               

               
Conread position:
               
287-718
               

               
Cow position:
               
chr17:32366463-32366031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
50, 114
               

               
Conread position:
               
287-718
               

               
Cow position:
               
chr17:40288831-40289255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 22
               

               
Conread position:
               
288-686
               

               
Cow position:
               
chr17:21755267-21755661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 15
               

               
Conread position:
               
288-694
               

               
Cow position:
               
chr17:38200594-38200998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
47, 107
               

               
Conread position:
               
289-534
               

               
Cow position:
               
chr17:38990274-38990026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
52, 36
               

               
Conread position:
               
289-663
               

               
Cow position:
               
chr17:9911927-9911566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 94
               

               
Conread position:
               
289-713
               

               
Cow position:
               
chr17:26765191-26764766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
50, 171
               

               
Conread position:
               
290-430
               

               
Cow position:
               
chr17:37430338-37430483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
47, 113
               

               
Conread position:
               
290-534
               

               
Cow position:
               
chr17:39715323-39715081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
11, 110
               

               
Conread position:
               
291-713
               

               
Cow position:
               
chr17:5255201-5255624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
50, 146
               

               
Conread position:
               
292-503
               

               
Cow position:
               
chr17:26730448-26730656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
42, 16
               

               
Conread position:
               
292-718
               

               
Cow position:
               
chr17:5900534-5900133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 111
               

               
Conread position:
               
294-474
               

               
Cow position:
               
chr17:34836334-34836152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
45, 105
               

               
Conread position:
               
294-513
               

               
Cow position:
               
chr17:16158652-16158434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
43, 15
               

               
Conread position:
               
294-708
               

               
Cow position:
               
chr17:552814-553210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
238, 103
               

               
Conread position:
               
294-709
               

               
Cow position:
               
chr17:30718255-30718663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 110
               

               
Conread position:
               
294-713
               

               
Cow position:
               
chr17:21335530-21335949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 14
               

               
Conread position:
               
295-661
               

               
Cow position:
               
chr17:41891899-41892262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
14, 30
               

               
Conread position:
               
295-698
               

               
Cow position:
               
chr17:5688212-5688584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
185, 8
               

               
Conread position:
               
296-686
               

               
Cow position:
               
chr17:8279550-8279932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
19, 34
               

               
Conread position:
               
298-659
               

               
Cow position:
               
chr17:37479843-37480186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
39, 99
               

               
Conread position:
               
298-705
               

               
Cow position:
               
chr17:43141550-43141963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 105
               

               
Conread position:
               
299-534
               

               
Cow position:
               
chr17:39857543-39857316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
35, 100
               

               
Conread position:
               
299-666
               

               
Cow position:
               
chr17:25032324-25032672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
38, 105
               

               
Conread position:
               
299-713
               

               
Cow position:
               
chr17:21495529-21495126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 100
               

               
Conread position:
               
299-718
               

               
Cow position:
               
chr17:21680937-21680513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 83
               

               
Conread position:
               
300-718
               

               
Cow position:
               
chr17:41030094-41029697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
37, 19
               

               
Conread position:
               
301-478
               

               
Cow position:
               
chr17:28814337-28814521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
36, 103
               

               
Conread position:
               
301-524
               

               
Cow position:
               
chr17:14848392-14848605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
40, 14
               

               
Conread position:
               
301-562
               

               
Cow position:
               
chr17:21757985-21758245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
33, 105
               

               
Conread position:
               
301-680
               

               
Cow position:
               
chr17:2662580-2662191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 105
               

               
Conread position:
               
303-534
               

               
Cow position:
               
chr17:10561788-10561553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
34, 87
               

               
Conread position:
               
303-641
               

               
Cow position:
               
chr17:12591328-12590988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
34, 163
               

               
Conread position:
               
304-440
               

               
Cow position:
               
chr17:44086803-44086671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
30, 59
               

               
Conread position:
               
306-689
               

               
Cow position:
               
chr17:7760322-7760690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
32, 77
               

               
Conread position:
               
306-712
               

               
Cow position:
               
chr17:30539119-30539499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
32, 72
               

               
Conread position:
               
306-718
               

               
Cow position:
               
chr17:9565451-9565054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 17
               

               
Conread position:
               
322-712
               

               
Cow position:
               
chr17:17121799-17121426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
345, 72
               

               
Conread position:
               
332-797
               

               
Cow position:
               
chr17:28540146-28539679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
325, 36
               

               
Conread position:
               
333-477
               

               
Cow position:
               
chr17:7851204-7851066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
333-478
               

               
Cow position:
               
chr17:7577714-7577568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
102, 63
               

               
Conread position:
               
333-487
               

               
Cow position:
               
chr17:32265373-32265517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
333-512
               

               
Cow position:
               
chr17:22246106-22245936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
333-516
               

               
Cow position:
               
chr17:36094120-36093943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
333-567
               

               
Cow position:
               
chr17:23798398-23798168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
213, 66
               

               
Conread position:
               
333-583
               

               
Cow position:
               
chr17:14060657-14060906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
195, 63
               

               
Conread position:
               
333-667
               

               
Cow position:
               
chr17:38647178-38646867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
266, 65
               

               
Conread position:
               
333-669
               

               
Cow position:
               
chr17:31231006-31231317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
266, 32
               

               
Conread position:
               
333-718
               

               
Cow position:
               
chr17:3503698-3503323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
317, 61
               

               
Conread position:
               
333-797
               

               
Cow position:
               
chr17:979050-979495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
298, 52
               

               
Conread position:
               
334-713
               

               
Cow position:
               
chr17:10473963-10473584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
62, 34
               

               
Conread position:
               
334-797
               

               
Cow position:
               
chr17:1568058-1568530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
62, 38
               

               
Conread position:
               
335-637
               

               
Cow position:
               
chr17:21917758-21918045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
335-690
               

               
Cow position:
               
chr17:3782158-3781817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
171, 40
               

               
Conread position:
               
336-514
               

               
Cow position:
               
chr17:3872652-3872481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
336-582
               

               
Cow position:
               
chr17:33410895-33411151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
40, 66
               

               
Conread position:
               
337-592
               

               
Cow position:
               
chr17:36500915-36500665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
196, 59
               

               
Conread position:
               
342-709
               

               
Cow position:
               
chr17:6264020-6263661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
66, 73
               

               
Conread position:
               
343-574
               

               
Cow position:
               
chr17:7654345-7654567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
205, 54
               

               
Conread position:
               
343-583
               

               
Cow position:
               
chr17:14762015-14762249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
214, 54
               

               
Conread position:
               
343-667
               

               
Cow position:
               
chr17:1275630-1275318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
256, 32
               

               
Conread position:
               
343-667
               

               
Cow position:
               
chr17:21628585-21628281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
221, 53
               

               
Conread position:
               
343-780
               

               
Cow position:
               
chr17:27142852-27142433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
53, 32
               

               
Conread position:
               
346-533
               

               
Cow position:
               
chr17:7137083-7136906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
347-688
               

               
Cow position:
               
chr17:34316614-34316934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
223, 31
               

               
Conread position:
               
348-702
               

               
Cow position:
               
chr17:1526249-1526593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
160, 19
               

               
Conread position:
               
350-478
               

               
Cow position:
               
chr17:21604513-21604392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
352-695
               

               
Cow position:
               
chr17:33998948-33999277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
37, 78
               

               
Conread position:
               
354-680
               

               
Cow position:
               
chr17:20870002-20870311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
181, 54
               

               
Conread position:
               
356-664
               

               
Cow position:
               
chr17:7648306-7648022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
133, 38
               

               
Conread position:
               
357-713
               

               
Cow position:
               
chr17:40893244-40892903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
192, 24
               

               
Conread position:
               
359-506
               

               
Cow position:
               
chr17:7600508-7600651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
359-625
               

               
Cow position:
               
chr17:27549737-27549987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
189, 23
               

               
Conread position:
               
367-713
               

               
Cow position:
               
chr17:27679150-27679495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 72
               

               
Conread position:
               
369-680
               

               
Cow position:
               
chr17:15333629-15333928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
186, 26
               

               
Conread position:
               
370-618
               

               
Cow position:
               
chr17:267505-267736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
178, 27
               

               
Conread position:
               
371-697
               

               
Cow position:
               
chr17:20839487-20839793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
25, 30
               

               
Conread position:
               
373-531
               

               
Cow position:
               
chr17:27770358-27770208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
373-542
               

               
Cow position:
               
chr17:17266814-17266979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
373-680
               

               
Cow position:
               
chr17:12059012-12059304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 22
               

               
Conread position:
               
375-533
               

               
Cow position:
               
chr17:21152431-21152280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
375-661
               

               
Cow position:
               
chr17:32950350-32950077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
179, 23
               

               
Conread position:
               
377-679
               

               
Cow position:
               
chr17:44232639-44232933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
222, 21
               

               
Conread position:
               
377-718
               

               
Cow position:
               
chr17:26183301-26182967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 18
               

               
Conread position:
               
378-583
               

               
Cow position:
               
chr17:3060633-3060826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
378-689
               

               
Cow position:
               
chr17:9778315-9778024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
293, 19
               

               
Conread position:
               
379-722
               

               
Cow position:
               
chr17:24550248-24549910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
205, 18
               

               
Conread position:
               
380-666
               

               
Cow position:
               
chr17:20912958-20912698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
381-667
               

               
Cow position:
               
chr17:966675-966940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
218, 61
               

               
Conread position:
               
382-628
               

               
Cow position:
               
chr17:21298300-21298062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
144, 13
               

               
Conread position:
               
382-655
               

               
Cow position:
               
chr17:34207745-34208009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
217, 70
               

               
Conread position:
               
382-679
               

               
Cow position:
               
chr17:33926052-33926338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
12, 41
               

               
Conread position:
               
382-713
               

               
Cow position:
               
chr17:1081061-1080753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
182, 10
               

               
Conread position:
               
385-689
               

               
Cow position:
               
chr17:8690374-8690667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
282, 62
               

               
Conread position:
               
385-713
               

               
Cow position:
               
chr17:32457498-32457831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
123, 64
               

               
Conread position:
               
385-797
               

               
Cow position:
               
chr17:3471486-3471070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 59
               

               
Conread position:
               
388-680
               

               
Cow position:
               
chr17:21323340-21323082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
211, 55
               

               
Conread position:
               
393-718
               

               
Cow position:
               
chr17:41399913-41400224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
206, 52
               

               
Conread position:
               
395-534
               

               
Cow position:
               
chr17:20306107-20305971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
395-574
               

               
Cow position:
               
chr17:30734237-30734413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
151, 26
               

               
Conread position:
               
395-583
               

               
Cow position:
               
chr17:5381937-5382116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
395-589
               

               
Cow position:
               
chr17:11921217-11921418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
395-663
               

               
Cow position:
               
chr17:21697788-21697536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
168, 11
               

               
Conread position:
               
395-667
               

               
Cow position:
               
chr17:27765330-27765080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
395-713
               

               
Cow position:
               
chr17:242695-242388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
204, 60
               

               
Conread position:
               
395-713
               

               
Cow position:
               
chr17:1295514-1295822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
153, 49
               

               
Conread position:
               
395-713
               

               
Cow position:
               
chr17:27306217-27305912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
151, 61
               

               
Conread position:
               
395-717
               

               
Cow position:
               
chr17:21031844-21031533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
170, 125
               

               
Conread position:
               
395-718
               

               
Cow position:
               
chr17:20358923-20358623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
198, 50
               

               
Conread position:
               
395-722
               

               
Cow position:
               
chr17:22773272-22773593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
52, 63
               

               
Conread position:
               
395-795
               

               
Cow position:
               
chr17:18884273-18884684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 132
               

               
Conread position:
               
397-710
               

               
Cow position:
               
chr17:11056314-11056627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
151, 25
               

               
Conread position:
               
397-713
               

               
Cow position:
               
chr17:42347169-42347472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
272, 47
               

               
Conread position:
               
398-530
               

               
Cow position:
               
chr17:26884686-26884555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
45, 83
               

               
Conread position:
               
398-627
               

               
Cow position:
               
chr17:1353451-1353235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
398-689
               

               
Cow position:
               
chr17:5246948-5246673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
201, 49
               

               
Conread position:
               
398-689
               

               
Cow position:
               
chr17:33402882-33403167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
150, 47
               

               
Conread position:
               
399-661
               

               
Cow position:
               
chr17:26881278-26881532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
155, 50
               

               
Conread position:
               
400-671
               

               
Cow position:
               
chr17:2839961-2839684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
135, 49
               

               
Conread position:
               
400-710
               

               
Cow position:
               
chr17:5895857-5896160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
11, 46
               

               
Conread position:
               
402-689
               

               
Cow position:
               
chr17:21312759-21313028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
197, 42
               

               
Conread position:
               
404-662
               

               
Cow position:
               
chr17:35311475-35311225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
181, 33
               

               
Conread position:
               
404-713
               

               
Cow position:
               
chr17:3387321-3387046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
142, 38
               

               
Conread position:
               
406-562
               

               
Cow position:
               
chr17:1505359-1505212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
408-698
               

               
Cow position:
               
chr17:4721538-4721251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 36
               

               
Conread position:
               
413-713
               

               
Cow position:
               
chr17:10271535-10271250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
186, 34
               

               
Conread position:
               
414-792
               

               
Cow position:
               
chr17:4472777-4473120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
420-694
               

               
Cow position:
               
chr17:27162684-27162419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
173, 46
               

               
Conread position:
               
429-713
               

               
Cow position:
               
chr17:20234253-20233976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
120, 18
               

               
Conread position:
               
430-710
               

               
Cow position:
               
chr17:25740977-25740702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
234, 15
               

               
Conread position:
               
432-713
               

               
Cow position:
               
chr17:11386540-11386265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
167, 63
               

               
Conread position:
               
433-713
               

               
Cow position:
               
chr17:21874283-21874567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
115, 95
               

               
Conread position:
               
449-575
               

               
Cow position:
               
chr17:25160147-25160277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
449-722
               

               
Cow position:
               
chr17:5041674-5041938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
150, 66
               

               
Conread position:
               
450-710
               

               
Cow position:
               
chr17:25168321-25168065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
103, 14
               

               
Conread position:
               
451-665
               

               
Cow position:
               
chr17:21017802-21017595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
148, 72
               

               
Conread position:
               
451-686
               

               
Cow position:
               
chr17:22781697-22781468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
148, 78
               

               
Conread position:
               
451-686
               

               
Cow position:
               
chr17:27819308-27819078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
219, 75
               

               
Conread position:
               
451-704
               

               
Cow position:
               
chr17:32651625-32651374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
97, 78
               

               
Conread position:
               
451-705
               

               
Cow position:
               
chr17:4824501-4824256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
238, 76
               

               
Conread position:
               
451-708
               

               
Cow position:
               
chr17:3306872-3306622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
29, 38
               

               
Conread position:
               
451-713
               

               
Cow position:
               
chr17:21363411-21363157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
148, 14
               

               
Conread position:
               
451-797
               

               
Cow position:
               
chr17:21707009-21707363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
103, 18
               

               
Conread position:
               
458-784
               

               
Cow position:
               
chr17:5380969-5380639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
53, 88
               

               
Conread position:
               
464-682
               

               
Cow position:
               
chr17:20835589-20835373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
135, 84
               

               
Conread position:
               
464-713
               

               
Cow position:
               
chr17:3518260-3518490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
136, 95
               

               
Conread position:
               
471-713
               

               
Cow position:
               
chr17:24877128-24876886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
129, 82
               

               
Conread position:
               
473-667
               

               
Cow position:
               
chr17:21710489-21710304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
91, 54
               

               
Conread position:
               
476-722
               

               
Cow position:
               
chr17:3498682-3498924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
10, 82
               

               
Conread position:
               
485-665
               

               
Cow position:
               
chr17:21412274-21412446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
65, 44
               

               
Conread position:
               
485-679
               

               
Cow position:
               
chr17:3182613-3182801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
108, 44
               

               
Conread position:
               
488-713
               

               
Cow position:
               
chr17:43527946-43527730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
111, 41
               

               
Conread position:
               
492-689
               

               
Cow position:
               
chr17:1358836-1359024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
108, 37
               

               
Conread position:
               
494-708
               

               
Cow position:
               
chr17:16117460-16117675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
86, 35
               

               
Conread position:
               
581-784
               

               
Cow position:
               
chr17:6996167-6995947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
583-797
               

               
Cow position:
               
chr17:5740445-5740217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
622-796
               

               
Cow position:
               
chr17:21794050-21793874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
49, 90
               
Show alignments to all cow chromosomes.