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Cow genome map

           
Conread name:
           
LyN1-MLN01F030047
        

               
Conread position:
               
57-373
               

               
Cow position:
               
chr21:45537608-45537284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
28, 64
               

               
Conread position:
               
191-581
               

               
Cow position:
               
chr21:47338-46937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 217
               

               
Conread position:
               
192-710
               

               
Cow position:
               
chr21:38121368-38120878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
529
               

               
Alignm identity:
               
365
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 101
               

               
Conread position:
               
196-687
               

               
Cow position:
               
chr21:47464834-47465318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
500
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 207
               

               
Conread position:
               
199-332
               

               
Cow position:
               
chr21:37479309-37479445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
93, 17
               

               
Conread position:
               
200-504
               

               
Cow position:
               
chr21:8950473-8950155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
89, 23
               

               
Conread position:
               
201-660
               

               
Cow position:
               
chr21:10007357-10007812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 201
               

               
Conread position:
               
202-390
               

               
Cow position:
               
chr21:8506267-8506463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
5, 0
               

               
Conread position:
               
202-390
               

               
Cow position:
               
chr21:8509155-8509351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
202-709
               

               
Cow position:
               
chr21:27229524-27230016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
519
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 84
               

               
Conread position:
               
203-504
               

               
Cow position:
               
chr21:14126549-14126263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
134, 20
               

               
Conread position:
               
203-745
               

               
Cow position:
               
chr21:39888449-39889001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
578
               

               
Alignm identity:
               
407
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 13
               

               
Conread position:
               
204-334
               

               
Cow position:
               
chr21:10727787-10727655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
204-383
               

               
Cow position:
               
chr21:29011698-29011880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
20, 111
               

               
Conread position:
               
204-516
               

               
Cow position:
               
chr21:10656825-10657139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
81, 21
               

               
Conread position:
               
204-583
               

               
Cow position:
               
chr21:30835643-30835261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 203
               

               
Conread position:
               
204-718
               

               
Cow position:
               
chr21:28733635-28734144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
531
               

               
Alignm identity:
               
382
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 37
               

               
Conread position:
               
205-421
               

               
Cow position:
               
chr21:15012705-15012493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
129, 16
               

               
Conread position:
               
205-437
               

               
Cow position:
               
chr21:40291473-40291708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
129, 164
               

               
Conread position:
               
206-515
               

               
Cow position:
               
chr21:42209370-42209667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
207-685
               

               
Cow position:
               
chr21:3763478-3763936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 16
               

               
Conread position:
               
207-689
               

               
Cow position:
               
chr21:23587146-23586672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
376
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 76
               

               
Conread position:
               
207-690
               

               
Cow position:
               
chr21:45356088-45355631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
461, 9
               

               
Conread position:
               
207-708
               

               
Cow position:
               
chr21:46848859-46849346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
514
               

               
Alignm identity:
               
361
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 91
               

               
Conread position:
               
208-334
               

               
Cow position:
               
chr21:20166054-20165926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
208-340
               

               
Cow position:
               
chr21:19339957-19340092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
208-390
               

               
Cow position:
               
chr21:36879609-36879787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
10, 93
               

               
Conread position:
               
208-432
               

               
Cow position:
               
chr21:30938393-30938629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
208-472
               

               
Cow position:
               
chr21:19561291-19561560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
102, 200
               

               
Conread position:
               
208-478
               

               
Cow position:
               
chr21:36508503-36508242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
126, 41
               

               
Conread position:
               
208-495
               

               
Cow position:
               
chr21:29658547-29658264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 93
               

               
Conread position:
               
208-500
               

               
Cow position:
               
chr21:16082840-16083138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
76, 22
               

               
Conread position:
               
208-522
               

               
Cow position:
               
chr21:742547-742245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
126, 93
               

               
Conread position:
               
208-533
               

               
Cow position:
               
chr21:868646-868979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 197
               

               
Conread position:
               
208-556
               

               
Cow position:
               
chr21:19067807-19067459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
23, 112
               

               
Conread position:
               
208-563
               

               
Cow position:
               
chr21:30236570-30236894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
68, 15
               

               
Conread position:
               
208-583
               

               
Cow position:
               
chr21:12301257-12301607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
242, 100
               

               
Conread position:
               
208-655
               

               
Cow position:
               
chr21:28244739-28244310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
129, 15
               

               
Conread position:
               
208-668
               

               
Cow position:
               
chr21:27145712-27146173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 44
               

               
Conread position:
               
209-328
               

               
Cow position:
               
chr21:49144728-49144851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
209-330
               

               
Cow position:
               
chr21:42341669-42341787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
122
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
209-332
               

               
Cow position:
               
chr21:41829107-41829233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
77, 14
               

               
Conread position:
               
209-334
               

               
Cow position:
               
chr21:17857036-17856911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
89, 14
               

               
Conread position:
               
209-335
               

               
Cow position:
               
chr21:12293296-12293166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
12, 44
               

               
Conread position:
               
209-335
               

               
Cow position:
               
chr21:45835119-45835244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
209-338
               

               
Cow position:
               
chr21:16099288-16099423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
209-338
               

               
Cow position:
               
chr21:19136632-19136759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
104, 14
               

               
Conread position:
               
209-338
               

               
Cow position:
               
chr21:42227425-42227557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
92, 63
               

               
Conread position:
               
209-340
               

               
Cow position:
               
chr21:34209743-34209876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
86, 14
               

               
Conread position:
               
209-353
               

               
Cow position:
               
chr21:20185519-20185374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
82, 63
               

               
Conread position:
               
209-377
               

               
Cow position:
               
chr21:41482701-41482879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
209-379
               

               
Cow position:
               
chr21:45446809-45446629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
89, 22
               

               
Conread position:
               
209-386
               

               
Cow position:
               
chr21:6292020-6291833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
83, 14
               

               
Conread position:
               
209-386
               

               
Cow position:
               
chr21:44732771-44732956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
100, 172
               

               
Conread position:
               
209-388
               

               
Cow position:
               
chr21:24757210-24757026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
23, 90
               

               
Conread position:
               
209-390
               

               
Cow position:
               
chr21:745442-745258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
128, 89
               

               
Conread position:
               
209-391
               

               
Cow position:
               
chr21:16797123-16796933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
85, 14
               

               
Conread position:
               
209-391
               

               
Cow position:
               
chr21:28882455-28882263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
209-404
               

               
Cow position:
               
chr21:4109048-4108846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
83, 14
               

               
Conread position:
               
209-406
               

               
Cow position:
               
chr21:34833807-34834013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
66, 21
               

               
Conread position:
               
209-410
               

               
Cow position:
               
chr21:5218978-5218765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
128, 13
               

               
Conread position:
               
209-410
               

               
Cow position:
               
chr21:16895678-16895479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
132, 43
               

               
Conread position:
               
209-419
               

               
Cow position:
               
chr21:6154072-6153857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
89, 40
               

               
Conread position:
               
209-421
               

               
Cow position:
               
chr21:13304067-13303846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
86, 194
               

               
Conread position:
               
209-423
               

               
Cow position:
               
chr21:30145360-30145576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
13, 187
               

               
Conread position:
               
209-428
               

               
Cow position:
               
chr21:27711962-27712196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
89, 200
               

               
Conread position:
               
209-440
               

               
Cow position:
               
chr21:9278800-9278558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
86, 196
               

               
Conread position:
               
209-441
               

               
Cow position:
               
chr21:6851436-6851206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
107, 14
               

               
Conread position:
               
209-442
               

               
Cow position:
               
chr21:9505141-9504899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
86, 166
               

               
Conread position:
               
209-442
               

               
Cow position:
               
chr21:31652659-31652421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
89, 165
               

               
Conread position:
               
209-451
               

               
Cow position:
               
chr21:26018653-26018404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
83, 196
               

               
Conread position:
               
209-466
               

               
Cow position:
               
chr21:36682600-36682334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
11, 197
               

               
Conread position:
               
209-476
               

               
Cow position:
               
chr21:71859-71588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
10, 194
               

               
Conread position:
               
209-478
               

               
Cow position:
               
chr21:8545747-8546017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 195
               

               
Conread position:
               
209-504
               

               
Cow position:
               
chr21:12354431-12354718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
39, 12
               

               
Conread position:
               
209-513
               

               
Cow position:
               
chr21:17997519-17997229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
62, 185
               

               
Conread position:
               
209-513
               

               
Cow position:
               
chr21:43388633-43388317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
75, 105
               

               
Conread position:
               
209-532
               

               
Cow position:
               
chr21:13656362-13656682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
83, 194
               

               
Conread position:
               
209-536
               

               
Cow position:
               
chr21:9697801-9698140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
22, 202
               

               
Conread position:
               
209-542
               

               
Cow position:
               
chr21:6998213-6997876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 72
               

               
Conread position:
               
209-558
               

               
Cow position:
               
chr21:40266396-40266049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 186
               

               
Conread position:
               
209-559
               

               
Cow position:
               
chr21:47713735-47714080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 115
               

               
Conread position:
               
209-582
               

               
Cow position:
               
chr21:16915055-16914669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
10, 245
               

               
Conread position:
               
209-627
               

               
Cow position:
               
chr21:12461695-12462109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 91
               

               
Conread position:
               
209-629
               

               
Cow position:
               
chr21:957941-957527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 176
               

               
Conread position:
               
209-629
               

               
Cow position:
               
chr21:9477436-9477018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
80, 191
               

               
Conread position:
               
209-629
               

               
Cow position:
               
chr21:17638167-17637758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
89, 194
               

               
Conread position:
               
209-689
               

               
Cow position:
               
chr21:37706139-37706607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
372
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 196
               

               
Conread position:
               
209-710
               

               
Cow position:
               
chr21:34654344-34653859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
513
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 90
               

               
Conread position:
               
209-713
               

               
Cow position:
               
chr21:5650173-5649678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
517
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 147
               

               
Conread position:
               
209-713
               

               
Cow position:
               
chr21:12154397-12153905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
515
               

               
Alignm identity:
               
378
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 89
               

               
Conread position:
               
209-713
               

               
Cow position:
               
chr21:13047918-13048424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
521
               

               
Alignm identity:
               
376
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 194
               

               
Conread position:
               
209-713
               

               
Cow position:
               
chr21:15545090-15545593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
520
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
55, 236
               

               
Conread position:
               
209-713
               

               
Cow position:
               
chr21:34010123-34010618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
519
               

               
Alignm identity:
               
364
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 110
               

               
Conread position:
               
209-713
               

               
Cow position:
               
chr21:38901037-38900545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
515
               

               
Alignm identity:
               
379
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 124
               

               
Conread position:
               
209-713
               

               
Cow position:
               
chr21:43241112-43240630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
512
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
182, 86
               

               
Conread position:
               
209-718
               

               
Cow position:
               
chr21:82331-81838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
523
               

               
Alignm identity:
               
367
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 52
               

               
Conread position:
               
209-721
               

               
Cow position:
               
chr21:34006-33487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
541
               

               
Alignm identity:
               
396
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 210
               

               
Conread position:
               
209-745
               

               
Cow position:
               
chr21:938292-937795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
547
               

               
Alignm identity:
               
381
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 14
               

               
Conread position:
               
209-783
               

               
Cow position:
               
chr21:3254406-3253854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
595
               

               
Alignm identity:
               
382
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
15, 77
               

               
Conread position:
               
209-797
               

               
Cow position:
               
chr21:44825601-44826203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
631
               

               
Alignm identity:
               
422
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 69
               

               
Conread position:
               
210-327
               

               
Cow position:
               
chr21:41216831-41216716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
118
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
210-335
               

               
Cow position:
               
chr21:48242779-48242911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
210-338
               

               
Cow position:
               
chr21:5345152-5345020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
210-338
               

               
Cow position:
               
chr21:30359079-30359205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
210-338
               

               
Cow position:
               
chr21:40593487-40593360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
94, 32
               

               
Conread position:
               
210-340
               

               
Cow position:
               
chr21:24222247-24222373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
210-386
               

               
Cow position:
               
chr21:3135597-3135782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
78, 42
               

               
Conread position:
               
210-386
               

               
Cow position:
               
chr21:8523903-8523728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
127, 20
               

               
Conread position:
               
210-386
               

               
Cow position:
               
chr21:12473791-12473969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
143, 0
               

               
Conread position:
               
210-386
               

               
Cow position:
               
chr21:13134867-13134688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
85, 13
               

               
Conread position:
               
210-387
               

               
Cow position:
               
chr21:20199158-20199345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
85, 28
               

               
Conread position:
               
210-388
               

               
Cow position:
               
chr21:31278459-31278268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
210-390
               

               
Cow position:
               
chr21:874796-874605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
210-393
               

               
Cow position:
               
chr21:47860872-47860678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
74, 31
               

               
Conread position:
               
210-394
               

               
Cow position:
               
chr21:14247407-14247214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
85, 177
               

               
Conread position:
               
210-394
               

               
Cow position:
               
chr21:20193244-20193049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
210-394
               

               
Cow position:
               
chr21:34737432-34737245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
79, 55
               

               
Conread position:
               
210-394
               

               
Cow position:
               
chr21:37360968-37361163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
35, 71
               

               
Conread position:
               
210-396
               

               
Cow position:
               
chr21:12298858-12298670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
119, 78
               

               
Conread position:
               
210-405
               

               
Cow position:
               
chr21:15869957-15869760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
127, 21
               

               
Conread position:
               
210-408
               

               
Cow position:
               
chr21:26828700-26828904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
85, 175
               

               
Conread position:
               
210-408
               

               
Cow position:
               
chr21:39278021-39278234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
210-410
               

               
Cow position:
               
chr21:22211527-22211318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
85, 193
               

               
Conread position:
               
210-410
               

               
Cow position:
               
chr21:30976995-30977192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
13, 80
               

               
Conread position:
               
210-410
               

               
Cow position:
               
chr21:38482653-38482448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
80, 177
               

               
Conread position:
               
210-416
               

               
Cow position:
               
chr21:5406083-5405875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
64, 40
               

               
Conread position:
               
210-417
               

               
Cow position:
               
chr21:14717773-14717991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
210-417
               

               
Cow position:
               
chr21:16190498-16190716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
210-421
               

               
Cow position:
               
chr21:17155677-17155898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
68, 194
               

               
Conread position:
               
210-422
               

               
Cow position:
               
chr21:12541126-12541346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
85, 163
               

               
Conread position:
               
210-422
               

               
Cow position:
               
chr21:25012348-25012135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
124, 13
               

               
Conread position:
               
210-424
               

               
Cow position:
               
chr21:17842724-17842946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
84, 195
               

               
Conread position:
               
210-427
               

               
Cow position:
               
chr21:26034101-26033875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
98, 193
               

               
Conread position:
               
210-430
               

               
Cow position:
               
chr21:13090648-13090419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
85, 192
               

               
Conread position:
               
210-434
               

               
Cow position:
               
chr21:17418811-17419041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
88, 171
               

               
Conread position:
               
210-436
               

               
Cow position:
               
chr21:28792684-28792445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
210-438
               

               
Cow position:
               
chr21:26392198-26391961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
74, 193
               

               
Conread position:
               
210-441
               

               
Cow position:
               
chr21:37847307-37847084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
210-442
               

               
Cow position:
               
chr21:6583869-6584104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
94, 123
               

               
Conread position:
               
210-442
               

               
Cow position:
               
chr21:36022916-36023157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
82, 193
               

               
Conread position:
               
210-445
               

               
Cow position:
               
chr21:12322769-12322530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
88, 191
               

               
Conread position:
               
210-445
               

               
Cow position:
               
chr21:13943846-13944085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
58, 180
               

               
Conread position:
               
210-445
               

               
Cow position:
               
chr21:27677753-27677512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
84, 13
               

               
Conread position:
               
210-446
               

               
Cow position:
               
chr21:12748965-12749210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
85, 193
               

               
Conread position:
               
210-446
               

               
Cow position:
               
chr21:18471845-18471606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
82, 185
               

               
Conread position:
               
210-449
               

               
Cow position:
               
chr21:15271168-15271422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
88, 35
               

               
Conread position:
               
210-450
               

               
Cow position:
               
chr21:40475772-40475521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 193
               

               
Conread position:
               
210-454
               

               
Cow position:
               
chr21:11174515-11174262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
74, 195
               

               
Conread position:
               
210-463
               

               
Cow position:
               
chr21:10130418-10130158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
85, 193
               

               
Conread position:
               
210-508
               

               
Cow position:
               
chr21:8961212-8961503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
84, 131
               

               
Conread position:
               
210-509
               

               
Cow position:
               
chr21:20165910-20165611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 27
               

               
Conread position:
               
210-515
               

               
Cow position:
               
chr21:46132865-46132548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
12, 215
               

               
Conread position:
               
210-521
               

               
Cow position:
               
chr21:41617468-41617782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
99, 172
               

               
Conread position:
               
210-524
               

               
Cow position:
               
chr21:30217945-30218232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
210-527
               

               
Cow position:
               
chr21:19059820-19060135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 176
               

               
Conread position:
               
210-531
               

               
Cow position:
               
chr21:28919260-28919576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
129, 89
               

               
Conread position:
               
210-532
               

               
Cow position:
               
chr21:21907170-21907482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 89
               

               
Conread position:
               
210-534
               

               
Cow position:
               
chr21:19458442-19458118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
204, 62
               

               
Conread position:
               
210-535
               

               
Cow position:
               
chr21:2103951-2103599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
74, 203
               

               
Conread position:
               
210-536
               

               
Cow position:
               
chr21:6017902-6017562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
41, 200
               

               
Conread position:
               
210-536
               

               
Cow position:
               
chr21:10743660-10743336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
82, 170
               

               
Conread position:
               
210-536
               

               
Cow position:
               
chr21:10859081-10858762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
97, 174
               

               
Conread position:
               
210-536
               

               
Cow position:
               
chr21:24342994-24343319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
85, 110
               

               
Conread position:
               
210-537
               

               
Cow position:
               
chr21:9036572-9036241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 56
               

               
Conread position:
               
210-542
               

               
Cow position:
               
chr21:16570160-16569839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
124, 38
               

               
Conread position:
               
210-542
               

               
Cow position:
               
chr21:19703001-19702662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
121, 73
               

               
Conread position:
               
210-553
               

               
Cow position:
               
chr21:11779267-11779604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 151
               

               
Conread position:
               
210-586
               

               
Cow position:
               
chr21:18155293-18155680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 67
               

               
Conread position:
               
210-593
               

               
Cow position:
               
chr21:19407301-19407703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 195
               

               
Conread position:
               
210-624
               

               
Cow position:
               
chr21:20418435-20418825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
355, 88
               

               
Conread position:
               
210-635
               

               
Cow position:
               
chr21:44963068-44962648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
88, 31
               

               
Conread position:
               
210-647
               

               
Cow position:
               
chr21:13840599-13840164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 153
               

               
Conread position:
               
210-650
               

               
Cow position:
               
chr21:13713566-13714005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
92, 45
               

               
Conread position:
               
210-659
               

               
Cow position:
               
chr21:41454666-41455122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
105, 26
               

               
Conread position:
               
210-667
               

               
Cow position:
               
chr21:13753142-13752715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
60, 40
               

               
Conread position:
               
210-686
               

               
Cow position:
               
chr21:27521071-27521526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
363
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 27
               

               
Conread position:
               
210-688
               

               
Cow position:
               
chr21:6051776-6051303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
363
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 192
               

               
Conread position:
               
210-698
               

               
Cow position:
               
chr21:13089200-13089695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
521
               

               
Alignm identity:
               
360
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 37
               

               
Conread position:
               
210-709
               

               
Cow position:
               
chr21:18289948-18289439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
528
               

               
Alignm identity:
               
363
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 206
               

               
Conread position:
               
210-709
               

               
Cow position:
               
chr21:44251570-44252052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
518
               

               
Alignm identity:
               
380
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 39
               

               
Conread position:
               
210-712
               

               
Cow position:
               
chr21:19195892-19196395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
520
               

               
Alignm identity:
               
362
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 19
               

               
Conread position:
               
210-712
               

               
Cow position:
               
chr21:25127882-25127383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
523
               

               
Alignm identity:
               
363
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 201
               

               
Conread position:
               
210-713
               

               
Cow position:
               
chr21:10070652-10071157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
525
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
92, 232
               

               
Conread position:
               
210-713
               

               
Cow position:
               
chr21:22856495-22855991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
522
               

               
Alignm identity:
               
366
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 49
               

               
Conread position:
               
210-713
               

               
Cow position:
               
chr21:25345135-25344650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
519
               

               
Alignm identity:
               
376
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 193
               

               
Conread position:
               
210-713
               

               
Cow position:
               
chr21:40786951-40786442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
522
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 162
               

               
Conread position:
               
210-713
               

               
Cow position:
               
chr21:47761042-47760549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
520
               

               
Alignm identity:
               
361
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 193
               

               
Conread position:
               
210-718
               

               
Cow position:
               
chr21:11706494-11706982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
517
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 160
               

               
Conread position:
               
210-791
               

               
Cow position:
               
chr21:17455653-17455071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
610
               

               
Alignm identity:
               
407
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 43
               

               
Conread position:
               
210-792
               

               
Cow position:
               
chr21:5238660-5238073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
614
               

               
Alignm identity:
               
416
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 63
               

               
Conread position:
               
210-796
               

               
Cow position:
               
chr21:38918473-38917898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
612
               

               
Alignm identity:
               
438
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 182
               

               
Conread position:
               
210-797
               

               
Cow position:
               
chr21:45970908-45971493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
608
               

               
Alignm identity:
               
423
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 86
               

               
Conread position:
               
211-291
               

               
Cow position:
               
chr21:39335462-39335542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
81
               

               
Alignm identity:
               
73
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
211-325
               

               
Cow position:
               
chr21:28955889-28955775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
115
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
211-333
               

               
Cow position:
               
chr21:23348330-23348443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
123
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
211-373
               

               
Cow position:
               
chr21:18495485-18495321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
124, 85
               

               
Conread position:
               
211-373
               

               
Cow position:
               
chr21:39810330-39810158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
211-384
               

               
Cow position:
               
chr21:9873590-9873406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
79, 30
               

               
Conread position:
               
211-393
               

               
Cow position:
               
chr21:11182818-11182633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
116, 12
               

               
Conread position:
               
211-394
               

               
Cow position:
               
chr21:13985859-13985665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
211-410
               

               
Cow position:
               
chr21:27409468-27409667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
123, 38
               

               
Conread position:
               
211-424
               

               
Cow position:
               
chr21:700518-700741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
12, 202
               

               
Conread position:
               
211-424
               

               
Cow position:
               
chr21:13817668-13817443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
12, 192
               

               
Conread position:
               
211-424
               

               
Cow position:
               
chr21:37928921-37928700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
79, 41
               

               
Conread position:
               
211-440
               

               
Cow position:
               
chr21:16498783-16498554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
126, 11
               

               
Conread position:
               
211-440
               

               
Cow position:
               
chr21:42145089-42144861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
123, 61
               

               
Conread position:
               
211-443
               

               
Cow position:
               
chr21:11755494-11755733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
73, 42
               

               
Conread position:
               
211-476
               

               
Cow position:
               
chr21:8430826-8431099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 190
               

               
Conread position:
               
211-527
               

               
Cow position:
               
chr21:9706997-9707320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
31, 198
               

               
Conread position:
               
211-527
               

               
Cow position:
               
chr21:44214380-44214076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
211-562
               

               
Cow position:
               
chr21:16152710-16152355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 195
               

               
Conread position:
               
211-583
               

               
Cow position:
               
chr21:10673380-10673024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
89, 101
               

               
Conread position:
               
211-664
               

               
Cow position:
               
chr21:22193824-22194286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 194
               

               
Conread position:
               
211-667
               

               
Cow position:
               
chr21:17184190-17183743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 72
               

               
Conread position:
               
211-679
               

               
Cow position:
               
chr21:42841315-42841785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 207
               

               
Conread position:
               
211-686
               

               
Cow position:
               
chr21:10004614-10005083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 12
               

               
Conread position:
               
211-701
               

               
Cow position:
               
chr21:33996980-33997441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
498
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
457, 50
               

               
Conread position:
               
211-711
               

               
Cow position:
               
chr21:44113866-44114353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
514
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 134
               

               
Conread position:
               
211-713
               

               
Cow position:
               
chr21:4281614-4282091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
507
               

               
Alignm identity:
               
382
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 14
               

               
Conread position:
               
211-713
               

               
Cow position:
               
chr21:27123855-27124356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
518
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 87
               

               
Conread position:
               
211-713
               

               
Cow position:
               
chr21:27863249-27863747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
515
               

               
Alignm identity:
               
390
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 79
               

               
Conread position:
               
211-713
               

               
Cow position:
               
chr21:33982544-33983038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
516
               

               
Alignm identity:
               
361
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 89
               

               
Conread position:
               
211-713
               

               
Cow position:
               
chr21:41974097-41974607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
528
               

               
Alignm identity:
               
375
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 183
               

               
Conread position:
               
211-713
               

               
Cow position:
               
chr21:42501322-42500803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
528
               

               
Alignm identity:
               
400
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 96
               

               
Conread position:
               
211-718
               

               
Cow position:
               
chr21:40899612-40899104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
526
               

               
Alignm identity:
               
371
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 61
               

               
Conread position:
               
212-388
               

               
Cow position:
               
chr21:8558207-8558389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
33, 11
               

               
Conread position:
               
212-390
               

               
Cow position:
               
chr21:22720836-22720657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
104, 170
               

               
Conread position:
               
212-394
               

               
Cow position:
               
chr21:16481747-16481557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
73, 19
               

               
Conread position:
               
212-402
               

               
Cow position:
               
chr21:21167998-21167795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
212-403
               

               
Cow position:
               
chr21:8986295-8986092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
83, 181
               

               
Conread position:
               
212-414
               

               
Cow position:
               
chr21:21940142-21940346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
116, 86
               

               
Conread position:
               
212-422
               

               
Cow position:
               
chr21:3178114-3177894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
85, 33
               

               
Conread position:
               
212-435
               

               
Cow position:
               
chr21:22005634-22005869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
90, 26
               

               
Conread position:
               
212-437
               

               
Cow position:
               
chr21:39394018-39393786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
30, 189
               

               
Conread position:
               
212-438
               

               
Cow position:
               
chr21:8924640-8924401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
70, 54
               

               
Conread position:
               
212-439
               

               
Cow position:
               
chr21:31279521-31279292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
122, 11
               

               
Conread position:
               
212-484
               

               
Cow position:
               
chr21:12104620-12104359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
155, 9
               

               
Conread position:
               
212-583
               

               
Cow position:
               
chr21:23979910-23980289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 191
               

               
Conread position:
               
212-648
               

               
Cow position:
               
chr21:41590299-41590716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 9
               

               
Conread position:
               
212-664
               

               
Cow position:
               
chr21:32339476-32339912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 71
               

               
Conread position:
               
212-667
               

               
Cow position:
               
chr21:33727211-33727639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
212-667
               

               
Cow position:
               
chr21:40589210-40589661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 237
               

               
Conread position:
               
212-681
               

               
Cow position:
               
chr21:38449183-38449648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 86
               

               
Conread position:
               
212-701
               

               
Cow position:
               
chr21:19958485-19958010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
506
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
80, 192
               

               
Conread position:
               
212-702
               

               
Cow position:
               
chr21:36763331-36762836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
516
               

               
Alignm identity:
               
374
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 184
               

               
Conread position:
               
212-708
               

               
Cow position:
               
chr21:6713255-6713761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
515
               

               
Alignm identity:
               
373
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 165
               

               
Conread position:
               
212-713
               

               
Cow position:
               
chr21:641854-641356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
517
               

               
Alignm identity:
               
371
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 87
               

               
Conread position:
               
212-713
               

               
Cow position:
               
chr21:643590-643109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
512
               

               
Alignm identity:
               
367
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 34
               

               
Conread position:
               
212-713
               

               
Cow position:
               
chr21:11739854-11740360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
517
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 9
               

               
Conread position:
               
212-713
               

               
Cow position:
               
chr21:39403260-39403766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
522
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 11
               

               
Conread position:
               
212-713
               

               
Cow position:
               
chr21:49699768-49700264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
518
               

               
Alignm identity:
               
376
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 194
               

               
Conread position:
               
212-716
               

               
Cow position:
               
chr21:5898140-5898631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
521
               

               
Alignm identity:
               
368
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 24
               

               
Conread position:
               
212-718
               

               
Cow position:
               
chr21:37299727-37299233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
524
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
66, 9
               

               
Conread position:
               
212-741
               

               
Cow position:
               
chr21:25764883-25764382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
536
               

               
Alignm identity:
               
359
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
389, 9
               

               
Conread position:
               
212-797
               

               
Cow position:
               
chr21:28924393-28923804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
626
               

               
Alignm identity:
               
438
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 205
               

               
Conread position:
               
213-327
               

               
Cow position:
               
chr21:20585408-20585525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
118
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
213-334
               

               
Cow position:
               
chr21:5489017-5488895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
76, 10
               

               
Conread position:
               
213-390
               

               
Cow position:
               
chr21:1464611-1464426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
76, 36
               

               
Conread position:
               
213-391
               

               
Cow position:
               
chr21:19220527-19220716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
213-395
               

               
Cow position:
               
chr21:18450023-18449831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
71, 167
               

               
Conread position:
               
213-410
               

               
Cow position:
               
chr21:7539259-7539467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
71, 17
               

               
Conread position:
               
213-417
               

               
Cow position:
               
chr21:34738839-34738635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
119, 35
               

               
Conread position:
               
213-431
               

               
Cow position:
               
chr21:25014772-25014982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
124, 74
               

               
Conread position:
               
213-435
               

               
Cow position:
               
chr21:21900327-21900559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
85, 114
               

               
Conread position:
               
213-438
               

               
Cow position:
               
chr21:13580683-13580450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
71, 106
               

               
Conread position:
               
213-442
               

               
Cow position:
               
chr21:8713689-8713926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
79, 190
               

               
Conread position:
               
213-476
               

               
Cow position:
               
chr21:10148267-10147994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
81, 100
               

               
Conread position:
               
213-505
               

               
Cow position:
               
chr21:38720517-38720226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
77, 57
               

               
Conread position:
               
213-513
               

               
Cow position:
               
chr21:13395849-13395564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
121, 39
               

               
Conread position:
               
213-532
               

               
Cow position:
               
chr21:10817302-10816970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
81, 189
               

               
Conread position:
               
213-540
               

               
Cow position:
               
chr21:976881-977205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
87, 39
               

               
Conread position:
               
213-563
               

               
Cow position:
               
chr21:33580679-33580336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 57
               

               
Conread position:
               
213-593
               

               
Cow position:
               
chr21:8207025-8206656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
237, 109
               

               
Conread position:
               
213-629
               

               
Cow position:
               
chr21:9301493-9301068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
89, 237
               

               
Conread position:
               
213-629
               

               
Cow position:
               
chr21:11027090-11027498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
72, 58
               

               
Conread position:
               
213-650
               

               
Cow position:
               
chr21:6909621-6910044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
71, 83
               

               
Conread position:
               
213-660
               

               
Cow position:
               
chr21:17559648-17560111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
82, 169
               

               
Conread position:
               
213-667
               

               
Cow position:
               
chr21:15911646-15911222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
303, 32
               

               
Conread position:
               
213-667
               

               
Cow position:
               
chr21:32559103-32559532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 184
               

               
Conread position:
               
213-667
               

               
Cow position:
               
chr21:33791129-33791546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
97, 32
               

               
Conread position:
               
213-676
               

               
Cow position:
               
chr21:5427195-5426755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 73
               

               
Conread position:
               
213-686
               

               
Cow position:
               
chr21:40134414-40133954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 99
               

               
Conread position:
               
213-686
               

               
Cow position:
               
chr21:41621395-41620918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
364
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 10
               

               
Conread position:
               
213-689
               

               
Cow position:
               
chr21:14464854-14464373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
500
               

               
Alignm identity:
               
363
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 193
               

               
Conread position:
               
213-702
               

               
Cow position:
               
chr21:19083317-19083821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
512
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
76, 196
               

               
Conread position:
               
213-709
               

               
Cow position:
               
chr21:13634306-13633818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
505
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
68, 59
               

               
Conread position:
               
213-710
               

               
Cow position:
               
chr21:6834318-6833827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
511
               

               
Alignm identity:
               
363
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 191
               

               
Conread position:
               
213-710
               

               
Cow position:
               
chr21:41156139-41155637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
518
               

               
Alignm identity:
               
375
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 160
               

               
Conread position:
               
213-713
               

               
Cow position:
               
chr21:17512042-17511548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
515
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 70
               

               
Conread position:
               
214-370
               

               
Cow position:
               
chr21:43655970-43655805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
214-391
               

               
Cow position:
               
chr21:27744296-27744107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
82, 103
               

               
Conread position:
               
214-394
               

               
Cow position:
               
chr21:24351117-24350931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
80, 9
               

               
Conread position:
               
214-405
               

               
Cow position:
               
chr21:41738175-41737976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
88, 58
               

               
Conread position:
               
214-433
               

               
Cow position:
               
chr21:17416023-17416250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
78, 185
               

               
Conread position:
               
214-440
               

               
Cow position:
               
chr21:43693084-43692852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
123, 49
               

               
Conread position:
               
214-442
               

               
Cow position:
               
chr21:41610445-41610200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
72, 9
               

               
Conread position:
               
214-521
               

               
Cow position:
               
chr21:22851182-22850878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
86, 173
               

               
Conread position:
               
214-525
               

               
Cow position:
               
chr21:10072433-10072099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
63, 56
               

               
Conread position:
               
214-581
               

               
Cow position:
               
chr21:46551858-46552201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
41, 53
               

               
Conread position:
               
214-671
               

               
Cow position:
               
chr21:14452500-14452047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 37
               

               
Conread position:
               
214-686
               

               
Cow position:
               
chr21:8618528-8618073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
116, 75
               

               
Conread position:
               
215-334
               

               
Cow position:
               
chr21:46609737-46609858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
122
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
215-383
               

               
Cow position:
               
chr21:58713-58540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
215-409
               

               
Cow position:
               
chr21:43316626-43316829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
74, 183
               

               
Conread position:
               
215-418
               

               
Cow position:
               
chr21:26735663-26735466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
120, 79
               

               
Conread position:
               
215-423
               

               
Cow position:
               
chr21:40820585-40820801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
70, 190
               

               
Conread position:
               
215-431
               

               
Cow position:
               
chr21:18341485-18341262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
82, 26
               

               
Conread position:
               
215-432
               

               
Cow position:
               
chr21:1562264-1562498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
69, 192
               

               
Conread position:
               
215-441
               

               
Cow position:
               
chr21:9819261-9819491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
98, 183
               

               
Conread position:
               
215-478
               

               
Cow position:
               
chr21:13589028-13588763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 109
               

               
Conread position:
               
215-531
               

               
Cow position:
               
chr21:36911003-36910688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
122, 74
               

               
Conread position:
               
215-534
               

               
Cow position:
               
chr21:22014457-22014132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
38, 29
               

               
Conread position:
               
215-538
               

               
Cow position:
               
chr21:45906355-45906680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
94, 114
               

               
Conread position:
               
215-559
               

               
Cow position:
               
chr21:17364212-17364549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
65, 183
               

               
Conread position:
               
215-667
               

               
Cow position:
               
chr21:29979502-29979934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
22, 86
               

               
Conread position:
               
215-689
               

               
Cow position:
               
chr21:13584786-13585262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
497
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 196
               

               
Conread position:
               
215-690
               

               
Cow position:
               
chr21:28028065-28027604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 195
               

               
Conread position:
               
215-713
               

               
Cow position:
               
chr21:5970580-5971064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
509
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 69
               

               
Conread position:
               
216-320
               

               
Cow position:
               
chr21:40432729-40432627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
105
               

               
Alignm identity:
               
89
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
216-327
               

               
Cow position:
               
chr21:785547-785660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
114
               

               
Alignm identity:
               
91
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
216-333
               

               
Cow position:
               
chr21:41668893-41668777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
118
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
111, 0
               

               
Conread position:
               
216-355
               

               
Cow position:
               
chr21:17072863-17072727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
116, 74
               

               
Conread position:
               
216-375
               

               
Cow position:
               
chr21:3379488-3379654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
47, 78
               

               
Conread position:
               
216-386
               

               
Cow position:
               
chr21:438821-438649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
110, 80
               

               
Conread position:
               
216-391
               

               
Cow position:
               
chr21:45376212-45376033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
118, 165
               

               
Conread position:
               
216-403
               

               
Cow position:
               
chr21:874589-874393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
76, 187
               

               
Conread position:
               
216-406
               

               
Cow position:
               
chr21:29418838-29418639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
18, 178
               

               
Conread position:
               
216-410
               

               
Cow position:
               
chr21:12349033-12348830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
76, 176
               

               
Conread position:
               
216-426
               

               
Cow position:
               
chr21:40571206-40571413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
121, 73
               

               
Conread position:
               
216-436
               

               
Cow position:
               
chr21:41041213-41040983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
80, 102
               

               
Conread position:
               
216-441
               

               
Cow position:
               
chr21:17252712-17252944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
93, 176
               

               
Conread position:
               
216-478
               

               
Cow position:
               
chr21:41917974-41918245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 48
               

               
Conread position:
               
216-494
               

               
Cow position:
               
chr21:44724111-44724380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 82
               

               
Conread position:
               
216-539
               

               
Cow position:
               
chr21:47363459-47363798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 251
               

               
Conread position:
               
216-575
               

               
Cow position:
               
chr21:38728421-38728066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
93, 186
               

               
Conread position:
               
216-713
               

               
Cow position:
               
chr21:4400058-4399572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
512
               

               
Alignm identity:
               
385
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 55
               

               
Conread position:
               
217-373
               

               
Cow position:
               
chr21:8358965-8359125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
120, 30
               

               
Conread position:
               
217-394
               

               
Cow position:
               
chr21:15305031-15305220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
217-401
               

               
Cow position:
               
chr21:18578304-18578490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
75, 124
               

               
Conread position:
               
217-406
               

               
Cow position:
               
chr21:42189496-42189688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
117, 87
               

               
Conread position:
               
217-419
               

               
Cow position:
               
chr21:31658890-31659091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
117, 73
               

               
Conread position:
               
217-432
               

               
Cow position:
               
chr21:13225981-13225758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
74, 52
               

               
Conread position:
               
217-562
               

               
Cow position:
               
chr21:41140451-41140800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 176
               

               
Conread position:
               
217-586
               

               
Cow position:
               
chr21:34663883-34663515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
114, 35
               

               
Conread position:
               
217-613
               

               
Cow position:
               
chr21:30222606-30222217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
121, 68
               

               
Conread position:
               
217-710
               

               
Cow position:
               
chr21:3585100-3585581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
510
               

               
Alignm identity:
               
382
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 192
               

               
Conread position:
               
217-713
               

               
Cow position:
               
chr21:15444818-15445307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
508
               

               
Alignm identity:
               
378
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 161
               

               
Conread position:
               
218-389
               

               
Cow position:
               
chr21:36115870-36115687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
218-391
               

               
Cow position:
               
chr21:11006505-11006689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
70, 106
               

               
Conread position:
               
218-391
               

               
Cow position:
               
chr21:40457871-40457683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
68, 54
               

               
Conread position:
               
218-394
               

               
Cow position:
               
chr21:32647923-32648110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
218-415
               

               
Cow position:
               
chr21:20174575-20174378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
60, 71
               

               
Conread position:
               
218-435
               

               
Cow position:
               
chr21:16794057-16793829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
84, 102
               

               
Conread position:
               
218-438
               

               
Cow position:
               
chr21:20213508-20213741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
71, 188
               

               
Conread position:
               
218-440
               

               
Cow position:
               
chr21:37837814-37838031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
5, 55
               

               
Conread position:
               
218-441
               

               
Cow position:
               
chr21:674931-674719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
218-514
               

               
Cow position:
               
chr21:37640829-37640522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
74, 232
               

               
Conread position:
               
218-538
               

               
Cow position:
               
chr21:17890566-17890244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 188
               

               
Conread position:
               
218-542
               

               
Cow position:
               
chr21:17983234-17982912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 19
               

               
Conread position:
               
218-562
               

               
Cow position:
               
chr21:1511549-1511209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 80
               

               
Conread position:
               
218-583
               

               
Cow position:
               
chr21:47008984-47009343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
330, 85
               

               
Conread position:
               
218-586
               

               
Cow position:
               
chr21:12916155-12916536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
76, 180
               

               
Conread position:
               
218-586
               

               
Cow position:
               
chr21:17874927-17875302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 185
               

               
Conread position:
               
218-626
               

               
Cow position:
               
chr21:20153220-20152810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 187
               

               
Conread position:
               
218-667
               

               
Cow position:
               
chr21:802060-802472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
37, 76
               

               
Conread position:
               
218-688
               

               
Cow position:
               
chr21:27568896-27569361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
80, 173
               

               
Conread position:
               
218-698
               

               
Cow position:
               
chr21:23535976-23535500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
501
               

               
Alignm identity:
               
363
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 186
               

               
Conread position:
               
218-722
               

               
Cow position:
               
chr21:24296502-24297000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
523
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 114
               

               
Conread position:
               
219-416
               

               
Cow position:
               
chr21:48482268-48482469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
65, 181
               

               
Conread position:
               
219-504
               

               
Cow position:
               
chr21:28030541-28030263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
115, 36
               

               
Conread position:
               
219-523
               

               
Cow position:
               
chr21:13842755-13842444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
83, 180
               

               
Conread position:
               
219-533
               

               
Cow position:
               
chr21:44829494-44829815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
73, 184
               

               
Conread position:
               
219-542
               

               
Cow position:
               
chr21:33413835-33414147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
34, 70
               

               
Conread position:
               
219-713
               

               
Cow position:
               
chr21:22718521-22719008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
512
               

               
Alignm identity:
               
389
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 51
               

               
Conread position:
               
221-334
               

               
Cow position:
               
chr21:16119902-16120015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
116
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
65, 31
               

               
Conread position:
               
221-374
               

               
Cow position:
               
chr21:32536651-32536495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
116, 69
               

               
Conread position:
               
221-386
               

               
Cow position:
               
chr21:37495684-37495859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
83, 60
               

               
Conread position:
               
221-393
               

               
Cow position:
               
chr21:36121489-36121307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
71, 36
               

               
Conread position:
               
221-399
               

               
Cow position:
               
chr21:30970195-30970009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
83, 39
               

               
Conread position:
               
221-476
               

               
Cow position:
               
chr21:46599618-46599362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
116, 176
               

               
Conread position:
               
221-478
               

               
Cow position:
               
chr21:12739348-12739080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
74, 193
               

               
Conread position:
               
221-508
               

               
Cow position:
               
chr21:31159646-31159373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
122, 45
               

               
Conread position:
               
221-533
               

               
Cow position:
               
chr21:15543979-15544272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
116, 31
               

               
Conread position:
               
221-534
               

               
Cow position:
               
chr21:22209983-22210298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
72, 177
               

               
Conread position:
               
221-542
               

               
Cow position:
               
chr21:5465007-5464685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
117, 183
               

               
Conread position:
               
221-572
               

               
Cow position:
               
chr21:36756868-36756507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
81, 34
               

               
Conread position:
               
221-686
               

               
Cow position:
               
chr21:30848688-30849140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
116, 76
               

               
Conread position:
               
221-689
               

               
Cow position:
               
chr21:24598903-24598455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
78, 28
               

               
Conread position:
               
221-689
               

               
Cow position:
               
chr21:34740086-34739645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
372, 63
               

               
Conread position:
               
221-698
               

               
Cow position:
               
chr21:30231436-30231916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
377
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 177
               

               
Conread position:
               
221-709
               

               
Cow position:
               
chr21:3236763-3236308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
379, 77
               

               
Conread position:
               
221-713
               

               
Cow position:
               
chr21:20160938-20160456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
509
               

               
Alignm identity:
               
380
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 30
               

               
Conread position:
               
221-713
               

               
Cow position:
               
chr21:21223522-21223056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
64, 60
               

               
Conread position:
               
222-423
               

               
Cow position:
               
chr21:24875611-24875404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
115, 181
               

               
Conread position:
               
222-424
               

               
Cow position:
               
chr21:17516069-17515859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
73, 146
               

               
Conread position:
               
222-439
               

               
Cow position:
               
chr21:11353323-11353098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
17, 180
               

               
Conread position:
               
222-440
               

               
Cow position:
               
chr21:12310732-12310512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
74, 50
               

               
Conread position:
               
222-500
               

               
Cow position:
               
chr21:18318972-18318692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
64, 151
               

               
Conread position:
               
222-523
               

               
Cow position:
               
chr21:8349581-8349284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
117, 28
               

               
Conread position:
               
222-525
               

               
Cow position:
               
chr21:29014658-29014959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 76
               

               
Conread position:
               
222-678
               

               
Cow position:
               
chr21:10264294-10263850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 110
               

               
Conread position:
               
222-680
               

               
Cow position:
               
chr21:23568484-23568013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
115, 74
               

               
Conread position:
               
222-702
               

               
Cow position:
               
chr21:30592055-30592515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 60
               

               
Conread position:
               
222-713
               

               
Cow position:
               
chr21:23673004-23672518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
507
               

               
Alignm identity:
               
360
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 41
               

               
Conread position:
               
223-367
               

               
Cow position:
               
chr21:34727462-34727313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
223-432
               

               
Cow position:
               
chr21:18783208-18783428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
73, 180
               

               
Conread position:
               
223-443
               

               
Cow position:
               
chr21:46809506-46809739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
70, 49
               

               
Conread position:
               
223-511
               

               
Cow position:
               
chr21:36695832-36696122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
62, 26
               

               
Conread position:
               
223-686
               

               
Cow position:
               
chr21:9311313-9310842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 236
               

               
Conread position:
               
223-713
               

               
Cow position:
               
chr21:15867559-15867087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
503
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
79, 98
               

               
Conread position:
               
225-664
               

               
Cow position:
               
chr21:17193492-17193935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 184
               

               
Conread position:
               
227-476
               

               
Cow position:
               
chr21:41287542-41287792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
110, 71
               

               
Conread position:
               
228-713
               

               
Cow position:
               
chr21:48637502-48637974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
505
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 175
               

               
Conread position:
               
229-340
               

               
Cow position:
               
chr21:31258721-31258606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
116
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
229-406
               

               
Cow position:
               
chr21:42017349-42017534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
60, 36
               

               
Conread position:
               
229-641
               

               
Cow position:
               
chr21:11456553-11456962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
103, 30
               

               
Conread position:
               
229-653
               

               
Cow position:
               
chr21:10114081-10114493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 101
               

               
Conread position:
               
229-713
               

               
Cow position:
               
chr21:19615427-19614945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
502
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 35
               

               
Conread position:
               
230-335
               

               
Cow position:
               
chr21:42920749-42920860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
112
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
230-381
               

               
Cow position:
               
chr21:40930225-40930383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
104, 0
               

               
Conread position:
               
230-394
               

               
Cow position:
               
chr21:8494894-8494719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
230-394
               

               
Cow position:
               
chr21:42355892-42355709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
230-411
               

               
Cow position:
               
chr21:14746023-14745834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
68, 173
               

               
Conread position:
               
230-419
               

               
Cow position:
               
chr21:19161966-19161768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
54, 168
               

               
Conread position:
               
230-425
               

               
Cow position:
               
chr21:14360619-14360415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
64, 174
               

               
Conread position:
               
230-441
               

               
Cow position:
               
chr21:24266310-24266531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
68, 175
               

               
Conread position:
               
230-487
               

               
Cow position:
               
chr21:32392811-32393058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
72, 118
               

               
Conread position:
               
230-509
               

               
Cow position:
               
chr21:6317434-6317710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
52, 176
               

               
Conread position:
               
230-517
               

               
Cow position:
               
chr21:10883667-10883962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
35, 175
               

               
Conread position:
               
230-527
               

               
Cow position:
               
chr21:41522162-41522455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
68, 20
               

               
Conread position:
               
230-532
               

               
Cow position:
               
chr21:28237448-28237763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
68, 149
               

               
Conread position:
               
230-533
               

               
Cow position:
               
chr21:10292745-10292438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
58, 69
               

               
Conread position:
               
230-533
               

               
Cow position:
               
chr21:22121753-22121468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
66, 84
               

               
Conread position:
               
230-534
               

               
Cow position:
               
chr21:37014174-37014457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 72
               

               
Conread position:
               
230-536
               

               
Cow position:
               
chr21:34151827-34151527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 25
               

               
Conread position:
               
230-542
               

               
Cow position:
               
chr21:41107525-41107824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
36, 87
               

               
Conread position:
               
230-665
               

               
Cow position:
               
chr21:12087828-12087418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
53, 83
               

               
Conread position:
               
230-689
               

               
Cow position:
               
chr21:11644715-11645173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 173
               

               
Conread position:
               
230-689
               

               
Cow position:
               
chr21:29001895-29002366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 219
               

               
Conread position:
               
230-705
               

               
Cow position:
               
chr21:15584172-15584623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 22
               

               
Conread position:
               
230-709
               

               
Cow position:
               
chr21:14760808-14760360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
362
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 35
               

               
Conread position:
               
230-713
               

               
Cow position:
               
chr21:8351043-8351529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
512
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 231
               

               
Conread position:
               
230-713
               

               
Cow position:
               
chr21:24858567-24858083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
498
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 174
               

               
Conread position:
               
230-713
               

               
Cow position:
               
chr21:31691723-31691253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 26
               

               
Conread position:
               
230-718
               

               
Cow position:
               
chr21:29069072-29069560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
506
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 175
               

               
Conread position:
               
230-718
               

               
Cow position:
               
chr21:44565478-44565937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
505
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
109, 20
               

               
Conread position:
               
231-334
               

               
Cow position:
               
chr21:40916731-40916629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
104
               

               
Alignm identity:
               
88
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
231-339
               

               
Cow position:
               
chr21:47784845-47784733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
113
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
231-444
               

               
Cow position:
               
chr21:7066135-7066350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
82, 60
               

               
Conread position:
               
231-535
               

               
Cow position:
               
chr21:37789752-37790056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 66
               

               
Conread position:
               
231-625
               

               
Cow position:
               
chr21:29978515-29978899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 14
               

               
Conread position:
               
231-680
               

               
Cow position:
               
chr21:42135369-42135819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 67
               

               
Conread position:
               
231-741
               

               
Cow position:
               
chr21:18568387-18568902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
531
               

               
Alignm identity:
               
392
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 177
               

               
Conread position:
               
232-423
               

               
Cow position:
               
chr21:2536887-2537087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
60, 181
               

               
Conread position:
               
232-441
               

               
Cow position:
               
chr21:24797904-24797691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
70, 151
               

               
Conread position:
               
232-512
               

               
Cow position:
               
chr21:13889405-13889683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
57, 87
               

               
Conread position:
               
232-533
               

               
Cow position:
               
chr21:7394618-7394328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
111, 31
               

               
Conread position:
               
232-533
               

               
Cow position:
               
chr21:34049640-34049933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
63, 23
               

               
Conread position:
               
232-578
               

               
Cow position:
               
chr21:10561336-10561686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 170
               

               
Conread position:
               
232-667
               

               
Cow position:
               
chr21:22861241-22860824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 55
               

               
Conread position:
               
232-683
               

               
Cow position:
               
chr21:3360767-3361212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 168
               

               
Conread position:
               
233-404
               

               
Cow position:
               
chr21:5214600-5214419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
65, 171
               

               
Conread position:
               
233-531
               

               
Cow position:
               
chr21:10410471-10410168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 39
               

               
Conread position:
               
233-784
               

               
Cow position:
               
chr21:28810027-28810574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
573
               

               
Alignm identity:
               
393
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
141, 52
               

               
Conread position:
               
235-387
               

               
Cow position:
               
chr21:7424767-7424928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
236-655
               

               
Cow position:
               
chr21:23310709-23311111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
52, 88
               

               
Conread position:
               
236-664
               

               
Cow position:
               
chr21:41198152-41198586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 13
               

               
Conread position:
               
237-679
               

               
Cow position:
               
chr21:31253777-31253341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 66
               

               
Conread position:
               
238-534
               

               
Cow position:
               
chr21:828967-829256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
66, 83
               

               
Conread position:
               
238-689
               

               
Cow position:
               
chr21:41579998-41579547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 34
               

               
Conread position:
               
238-713
               

               
Cow position:
               
chr21:4080591-4080126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 166
               

               
Conread position:
               
238-718
               

               
Cow position:
               
chr21:46912792-46912312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
500
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 163
               

               
Conread position:
               
241-436
               

               
Cow position:
               
chr21:28191589-28191395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
50, 118
               

               
Conread position:
               
241-438
               

               
Cow position:
               
chr21:7221108-7221303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
20, 57
               

               
Conread position:
               
242-532
               

               
Cow position:
               
chr21:7377684-7377982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 166
               

               
Conread position:
               
243-792
               

               
Cow position:
               
chr21:6624397-6623815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
595
               

               
Alignm identity:
               
428
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 70
               

               
Conread position:
               
244-713
               

               
Cow position:
               
chr21:42905158-42905603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
199, 45
               

               
Conread position:
               
245-442
               

               
Cow position:
               
chr21:49276373-49276167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
50, 158
               

               
Conread position:
               
245-718
               

               
Cow position:
               
chr21:18932703-18932260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
14, 5
               

               
Conread position:
               
248-442
               

               
Cow position:
               
chr21:23573570-23573370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
56, 152
               

               
Conread position:
               
248-471
               

               
Cow position:
               
chr21:39319174-39319406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
43, 155
               

               
Conread position:
               
252-432
               

               
Cow position:
               
chr21:6735964-6736146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
85, 38
               

               
Conread position:
               
254-709
               

               
Cow position:
               
chr21:36795830-36795376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 152
               

               
Conread position:
               
255-478
               

               
Cow position:
               
chr21:7768661-7768435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
83, 43
               

               
Conread position:
               
255-513
               

               
Cow position:
               
chr21:44860905-44861145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
44, 12
               

               
Conread position:
               
255-575
               

               
Cow position:
               
chr21:42007233-42007563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
47, 148
               

               
Conread position:
               
255-671
               

               
Cow position:
               
chr21:47763891-47764295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 17
               

               
Conread position:
               
255-688
               

               
Cow position:
               
chr21:1059291-1058874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 76
               

               
Conread position:
               
255-688
               

               
Cow position:
               
chr21:19259042-19258623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 48
               

               
Conread position:
               
255-710
               

               
Cow position:
               
chr21:17642763-17643188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 32
               

               
Conread position:
               
255-713
               

               
Cow position:
               
chr21:9416476-9416014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
359
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 62
               

               
Conread position:
               
256-718
               

               
Cow position:
               
chr21:17723241-17722792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
46, 128
               

               
Conread position:
               
256-797
               

               
Cow position:
               
chr21:18929920-18929382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
559
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
42, 7
               

               
Conread position:
               
263-661
               

               
Cow position:
               
chr21:21169275-21169667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 124
               

               
Conread position:
               
263-690
               

               
Cow position:
               
chr21:8549901-8549476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 135
               

               
Conread position:
               
265-667
               

               
Cow position:
               
chr21:9990727-9990336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
33, 134
               

               
Conread position:
               
265-701
               

               
Cow position:
               
chr21:45329738-45330158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
72, 33
               

               
Conread position:
               
275-640
               

               
Cow position:
               
chr21:10823767-10823402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 127
               

               
Conread position:
               
276-700
               

               
Cow position:
               
chr21:21983013-21982591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
20, 104
               

               
Conread position:
               
277-533
               

               
Cow position:
               
chr21:36910134-36909881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
60, 122
               

               
Conread position:
               
277-645
               

               
Cow position:
               
chr21:45920858-45921215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
61, 16
               

               
Conread position:
               
277-698
               

               
Cow position:
               
chr21:42384708-42384292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 23
               

               
Conread position:
               
279-708
               

               
Cow position:
               
chr21:13727563-13727983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
58, 101
               

               
Conread position:
               
280-686
               

               
Cow position:
               
chr21:32237474-32237096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
17, 68
               

               
Conread position:
               
280-690
               

               
Cow position:
               
chr21:18779774-18780175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
20, 125
               

               
Conread position:
               
280-797
               

               
Cow position:
               
chr21:10152003-10151470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
550
               

               
Alignm identity:
               
384
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 18
               

               
Conread position:
               
281-687
               

               
Cow position:
               
chr21:41598011-41597613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 124
               

               
Conread position:
               
281-713
               

               
Cow position:
               
chr21:5153819-5153389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 9
               

               
Conread position:
               
282-689
               

               
Cow position:
               
chr21:30606897-30607289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 54
               

               
Conread position:
               
283-533
               

               
Cow position:
               
chr21:27429648-27429412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
283-686
               

               
Cow position:
               
chr21:2927006-2927400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
19, 97
               

               
Conread position:
               
284-436
               

               
Cow position:
               
chr21:13164055-13163898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
53, 120
               

               
Conread position:
               
284-444
               

               
Cow position:
               
chr21:8213085-8213247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
50, 97
               

               
Conread position:
               
284-446
               

               
Cow position:
               
chr21:44592014-44592180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
54, 25
               

               
Conread position:
               
284-472
               

               
Cow position:
               
chr21:30157610-30157802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
54, 31
               

               
Conread position:
               
284-526
               

               
Cow position:
               
chr21:19514050-19513818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
11, 55
               

               
Conread position:
               
284-534
               

               
Cow position:
               
chr21:43259415-43259168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
39, 115
               

               
Conread position:
               
284-556
               

               
Cow position:
               
chr21:30256078-30256340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
60, 115
               

               
Conread position:
               
284-583
               

               
Cow position:
               
chr21:10538059-10538369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
50, 115
               

               
Conread position:
               
284-644
               

               
Cow position:
               
chr21:10633443-10633796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
20, 47
               

               
Conread position:
               
284-669
               

               
Cow position:
               
chr21:12801549-12801924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
23, 165
               

               
Conread position:
               
284-686
               

               
Cow position:
               
chr21:3818404-3818015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 119
               

               
Conread position:
               
284-713
               

               
Cow position:
               
chr21:23800931-23801349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
5, 122
               

               
Conread position:
               
284-713
               

               
Cow position:
               
chr21:33350937-33350517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 121
               

               
Conread position:
               
284-713
               

               
Cow position:
               
chr21:46264366-46263949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
50, 118
               

               
Conread position:
               
284-718
               

               
Cow position:
               
chr21:16696569-16696138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 154
               

               
Conread position:
               
285-410
               

               
Cow position:
               
chr21:42131160-42131292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
285-446
               

               
Cow position:
               
chr21:30119889-30119723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
57, 119
               

               
Conread position:
               
285-469
               

               
Cow position:
               
chr21:19359981-19360167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
52, 117
               

               
Conread position:
               
285-586
               

               
Cow position:
               
chr21:40168431-40168740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
51, 94
               

               
Conread position:
               
285-627
               

               
Cow position:
               
chr21:11360219-11359899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
195, 13
               

               
Conread position:
               
285-661
               

               
Cow position:
               
chr21:13365539-13365172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 111
               

               
Conread position:
               
285-678
               

               
Cow position:
               
chr21:10118759-10118360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 13
               

               
Conread position:
               
285-686
               

               
Cow position:
               
chr21:29485173-29484783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
49, 93
               

               
Conread position:
               
285-713
               

               
Cow position:
               
chr21:17416574-17416990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
384, 30
               

               
Conread position:
               
285-718
               

               
Cow position:
               
chr21:13127906-13128326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
49, 13
               

               
Conread position:
               
286-666
               

               
Cow position:
               
chr21:18790372-18790733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
61, 114
               

               
Conread position:
               
287-513
               

               
Cow position:
               
chr21:734782-734562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
51, 76
               

               
Conread position:
               
287-532
               

               
Cow position:
               
chr21:3400639-3400881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
53, 91
               

               
Conread position:
               
287-643
               

               
Cow position:
               
chr21:24642705-24642364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
342, 53
               

               
Conread position:
               
287-651
               

               
Cow position:
               
chr21:713136-712772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 118
               

               
Conread position:
               
287-679
               

               
Cow position:
               
chr21:1591740-1591357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 11
               

               
Conread position:
               
287-713
               

               
Cow position:
               
chr21:7581712-7582133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 117
               

               
Conread position:
               
287-713
               

               
Cow position:
               
chr21:23321885-23322309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 112
               

               
Conread position:
               
288-586
               

               
Cow position:
               
chr21:25628720-25629018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
45, 114
               

               
Conread position:
               
288-713
               

               
Cow position:
               
chr21:10514995-10514584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 37
               

               
Conread position:
               
289-680
               

               
Cow position:
               
chr21:35569175-35569579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
45, 11
               

               
Conread position:
               
289-717
               

               
Cow position:
               
chr21:28989803-28989394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
48, 14
               

               
Conread position:
               
289-784
               

               
Cow position:
               
chr21:26245105-26244619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
508
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 115
               

               
Conread position:
               
290-710
               

               
Cow position:
               
chr21:45473567-45473984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 109
               

               
Conread position:
               
290-713
               

               
Cow position:
               
chr21:15976822-15976413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 108
               

               
Conread position:
               
290-718
               

               
Cow position:
               
chr21:26647826-26648236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 33
               

               
Conread position:
               
290-796
               

               
Cow position:
               
chr21:2809975-2810450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
525
               

               
Alignm identity:
               
360
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
44, 21
               

               
Conread position:
               
291-713
               

               
Cow position:
               
chr21:27341406-27341822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 99
               

               
Conread position:
               
292-469
               

               
Cow position:
               
chr21:7584038-7583856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
34, 111
               

               
Conread position:
               
292-709
               

               
Cow position:
               
chr21:28626425-28626017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 96
               

               
Conread position:
               
292-712
               

               
Cow position:
               
chr21:28429632-28429223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 110
               

               
Conread position:
               
293-686
               

               
Cow position:
               
chr21:33563190-33562818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 74
               

               
Conread position:
               
299-655
               

               
Cow position:
               
chr21:10001256-10000914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 81
               

               
Conread position:
               
299-718
               

               
Cow position:
               
chr21:396048-395646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 95
               

               
Conread position:
               
300-598
               

               
Cow position:
               
chr21:21077780-21077489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
42, 80
               

               
Conread position:
               
300-713
               

               
Cow position:
               
chr21:724711-725118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 77
               

               
Conread position:
               
300-713
               

               
Cow position:
               
chr21:44671924-44671525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 93
               

               
Conread position:
               
301-689
               

               
Cow position:
               
chr21:25383205-25382805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 94
               

               
Conread position:
               
301-718
               

               
Cow position:
               
chr21:39401761-39401368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 22
               

               
Conread position:
               
302-534
               

               
Cow position:
               
chr21:6758521-6758292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
41, 81
               

               
Conread position:
               
304-478
               

               
Cow position:
               
chr21:1764703-1764863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
304-519
               

               
Cow position:
               
chr21:471850-471637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
37, 109
               

               
Conread position:
               
305-713
               

               
Cow position:
               
chr21:42413922-42414327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 95
               

               
Conread position:
               
306-526
               

               
Cow position:
               
chr21:27406070-27406300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
31, 160
               

               
Conread position:
               
306-667
               

               
Cow position:
               
chr21:8235388-8235722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
31, 76
               

               
Conread position:
               
306-669
               

               
Cow position:
               
chr21:37344927-37345282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 93
               

               
Conread position:
               
310-532
               

               
Cow position:
               
chr21:28955671-28955454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
24, 45
               

               
Conread position:
               
313-718
               

               
Cow position:
               
chr21:36643066-36642675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
233, 130
               

               
Conread position:
               
314-713
               

               
Cow position:
               
chr21:43357100-43357489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 23
               

               
Conread position:
               
317-697
               

               
Cow position:
               
chr21:17475980-17475606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
27, 59
               

               
Conread position:
               
333-604
               

               
Cow position:
               
chr21:20260179-20260451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
211, 62
               

               
Conread position:
               
333-611
               

               
Cow position:
               
chr21:36789935-36789671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
266, 58
               

               
Conread position:
               
333-634
               

               
Cow position:
               
chr21:11251009-11250720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
199, 43
               

               
Conread position:
               
333-684
               

               
Cow position:
               
chr21:13738693-13738372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
331, 42
               

               
Conread position:
               
333-688
               

               
Cow position:
               
chr21:45330467-45330811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
266, 41
               

               
Conread position:
               
333-709
               

               
Cow position:
               
chr21:34390835-34391194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
335, 63
               

               
Conread position:
               
333-713
               

               
Cow position:
               
chr21:4998355-4998713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
266, 63
               

               
Conread position:
               
333-713
               

               
Cow position:
               
chr21:5567126-5566763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
215, 43
               

               
Conread position:
               
334-559
               

               
Cow position:
               
chr21:21633165-21633375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
112, 12
               

               
Conread position:
               
334-583
               

               
Cow position:
               
chr21:2260227-2260461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
235, 25
               

               
Conread position:
               
334-598
               

               
Cow position:
               
chr21:7340391-7340127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
42, 120
               

               
Conread position:
               
336-487
               

               
Cow position:
               
chr21:14441974-14441827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
336-534
               

               
Cow position:
               
chr21:40432582-40432395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
336-536
               

               
Cow position:
               
chr21:17009118-17008927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
336-536
               

               
Cow position:
               
chr21:17929700-17929895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
336-536
               

               
Cow position:
               
chr21:46141185-46140987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
86, 96
               

               
Conread position:
               
336-655
               

               
Cow position:
               
chr21:9028753-9028454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
144, 60
               

               
Conread position:
               
336-669
               

               
Cow position:
               
chr21:45850570-45850890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
78, 39
               

               
Conread position:
               
336-713
               

               
Cow position:
               
chr21:4904830-4905195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
264, 60
               

               
Conread position:
               
337-741
               

               
Cow position:
               
chr21:20044628-20045020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
262, 59
               

               
Conread position:
               
342-558
               

               
Cow position:
               
chr21:11198017-11198227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
102, 0
               

               
Conread position:
               
342-667
               

               
Cow position:
               
chr21:13488658-13488341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
70, 50
               

               
Conread position:
               
342-713
               

               
Cow position:
               
chr21:7564176-7564550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 54
               

               
Conread position:
               
343-713
               

               
Cow position:
               
chr21:16187677-16188024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
326, 52
               

               
Conread position:
               
343-713
               

               
Cow position:
               
chr21:45915588-45915932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
265, 31
               

               
Conread position:
               
343-718
               

               
Cow position:
               
chr21:33729560-33729201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
256, 53
               

               
Conread position:
               
343-797
               

               
Cow position:
               
chr21:8125675-8126124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
248, 47
               

               
Conread position:
               
344-713
               

               
Cow position:
               
chr21:13489776-13489415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
10, 54
               

               
Conread position:
               
344-713
               

               
Cow position:
               
chr21:36162830-36163191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
255, 52
               

               
Conread position:
               
345-713
               

               
Cow position:
               
chr21:41878598-41878248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
254, 7
               

               
Conread position:
               
346-663
               

               
Cow position:
               
chr21:32455031-32454727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
242, 43
               

               
Conread position:
               
346-686
               

               
Cow position:
               
chr21:44515391-44515073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
174, 49
               

               
Conread position:
               
346-713
               

               
Cow position:
               
chr21:44431-44090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
164, 6
               

               
Conread position:
               
346-713
               

               
Cow position:
               
chr21:28442859-28442511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
254, 49
               

               
Conread position:
               
346-728
               

               
Cow position:
               
chr21:23786159-23785785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
203, 52
               

               
Conread position:
               
347-532
               

               
Cow position:
               
chr21:9302301-9302481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
182, 50
               

               
Conread position:
               
349-534
               

               
Cow position:
               
chr21:33359919-33360088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
349-586
               

               
Cow position:
               
chr21:8452009-8451788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
206, 32
               

               
Conread position:
               
349-586
               

               
Cow position:
               
chr21:17856668-17856437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
349-689
               

               
Cow position:
               
chr21:18828178-18828513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
106, 46
               

               
Conread position:
               
349-752
               

               
Cow position:
               
chr21:5636596-5636988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 95
               

               
Conread position:
               
349-796
               

               
Cow position:
               
chr21:19363335-19363787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
158, 46
               

               
Conread position:
               
350-604
               

               
Cow position:
               
chr21:38664762-38664510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
136, 31
               

               
Conread position:
               
350-667
               

               
Cow position:
               
chr21:18844889-18845193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
82, 45
               

               
Conread position:
               
351-583
               

               
Cow position:
               
chr21:18415174-18414943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
78, 30
               

               
Conread position:
               
351-713
               

               
Cow position:
               
chr21:10727399-10727053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
317, 46
               

               
Conread position:
               
352-679
               

               
Cow position:
               
chr21:46144080-46143752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
201, 43
               

               
Conread position:
               
352-698
               

               
Cow position:
               
chr21:48263255-48262920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
116, 31
               

               
Conread position:
               
356-708
               

               
Cow position:
               
chr21:24222420-24222764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
209, 41
               

               
Conread position:
               
359-522
               

               
Cow position:
               
chr21:13495657-13495498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
359-719
               

               
Cow position:
               
chr21:24607500-24607152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 37
               

               
Conread position:
               
360-533
               

               
Cow position:
               
chr21:46463632-46463467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
108, 16
               

               
Conread position:
               
361-702
               

               
Cow position:
               
chr21:2679669-2679335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
238, 34
               

               
Conread position:
               
366-534
               

               
Cow position:
               
chr21:19210821-19210660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
368-713
               

               
Cow position:
               
chr21:11640127-11639792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
235, 29
               

               
Conread position:
               
369-538
               

               
Cow position:
               
chr21:5612212-5612051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
369-646
               

               
Cow position:
               
chr21:45439132-45439407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
157, 29
               

               
Conread position:
               
369-712
               

               
Cow position:
               
chr21:32536081-32535749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
230, 23
               

               
Conread position:
               
369-713
               

               
Cow position:
               
chr21:28882243-28881921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 18
               

               
Conread position:
               
370-514
               

               
Cow position:
               
chr21:34727132-34727275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
370-586
               

               
Cow position:
               
chr21:34722685-34722896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
180, 27
               

               
Conread position:
               
370-686
               

               
Cow position:
               
chr21:3380975-3381282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
82, 27
               

               
Conread position:
               
371-713
               

               
Cow position:
               
chr21:4189943-4189606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
55, 25
               

               
Conread position:
               
372-661
               

               
Cow position:
               
chr21:6102160-6102439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
163, 25
               

               
Conread position:
               
373-679
               

               
Cow position:
               
chr21:31277910-31277627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
226, 24
               

               
Conread position:
               
374-713
               

               
Cow position:
               
chr21:5344765-5344433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
85, 22
               

               
Conread position:
               
375-534
               

               
Cow position:
               
chr21:22720326-22720172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
375-644
               

               
Cow position:
               
chr21:21770225-21769969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
224, 22
               

               
Conread position:
               
375-662
               

               
Cow position:
               
chr21:9873057-9872794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
111, 7
               

               
Conread position:
               
376-684
               

               
Cow position:
               
chr21:17674136-17674435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
133, 28
               

               
Conread position:
               
376-713
               

               
Cow position:
               
chr21:47802160-47802490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 49
               

               
Conread position:
               
376-789
               

               
Cow position:
               
chr21:3813386-3813798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
223, 21
               

               
Conread position:
               
377-588
               

               
Cow position:
               
chr21:5985222-5985424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
171, 18
               

               
Conread position:
               
377-686
               

               
Cow position:
               
chr21:12960800-12961100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
10, 22
               

               
Conread position:
               
379-713
               

               
Cow position:
               
chr21:45867028-45866708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
289, 19
               

               
Conread position:
               
381-661
               

               
Cow position:
               
chr21:17175239-17174971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
266, 16
               

               
Conread position:
               
381-713
               

               
Cow position:
               
chr21:6764608-6764930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
167, 11
               

               
Conread position:
               
381-718
               

               
Cow position:
               
chr21:20925411-20925738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
182, 24
               

               
Conread position:
               
382-667
               

               
Cow position:
               
chr21:39450068-39450346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
166, 67
               

               
Conread position:
               
385-722
               

               
Cow position:
               
chr21:5454901-5455223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
131, 59
               

               
Conread position:
               
386-797
               

               
Cow position:
               
chr21:44109088-44108683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
213, 10
               

               
Conread position:
               
388-619
               

               
Cow position:
               
chr21:42131507-42131736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
158, 33
               

               
Conread position:
               
388-625
               

               
Cow position:
               
chr21:34737117-34736894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
173, 49
               

               
Conread position:
               
389-718
               

               
Cow position:
               
chr21:13898274-13897961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
270, 60
               

               
Conread position:
               
390-689
               

               
Cow position:
               
chr21:3047762-3047482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
107, 55
               

               
Conread position:
               
393-650
               

               
Cow position:
               
chr21:28617673-28617429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
171, 53
               

               
Conread position:
               
393-718
               

               
Cow position:
               
chr21:42913661-42913978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
171, 52
               

               
Conread position:
               
395-667
               

               
Cow position:
               
chr21:2785696-2785955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
204, 52
               

               
Conread position:
               
395-680
               

               
Cow position:
               
chr21:26829183-26829436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
395-689
               

               
Cow position:
               
chr21:5137407-5137692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
204, 26
               

               
Conread position:
               
395-689
               

               
Cow position:
               
chr21:24765362-24765080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
136, 13
               

               
Conread position:
               
395-698
               

               
Cow position:
               
chr21:18783608-18783894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
205, 47
               

               
Conread position:
               
395-701
               

               
Cow position:
               
chr21:18935830-18935545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
198, 23
               

               
Conread position:
               
395-702
               

               
Cow position:
               
chr21:17410578-17410876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
204, 20
               

               
Conread position:
               
395-710
               

               
Cow position:
               
chr21:8985632-8985324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 107
               

               
Conread position:
               
395-713
               

               
Cow position:
               
chr21:394116-393793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
40, 119
               

               
Conread position:
               
395-713
               

               
Cow position:
               
chr21:1464310-1464005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
153, 49
               

               
Conread position:
               
395-718
               

               
Cow position:
               
chr21:27743829-27743509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 48
               

               
Conread position:
               
397-537
               

               
Cow position:
               
chr21:7391199-7391334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
397-582
               

               
Cow position:
               
chr21:39809972-39809793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
157, 47
               

               
Conread position:
               
397-701
               

               
Cow position:
               
chr21:36793973-36793666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
157, 52
               

               
Conread position:
               
397-722
               

               
Cow position:
               
chr21:16910139-16909818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
202, 45
               

               
Conread position:
               
398-680
               

               
Cow position:
               
chr21:21077403-21077134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
150, 44
               

               
Conread position:
               
398-713
               

               
Cow position:
               
chr21:13751470-13751160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
81, 47
               

               
Conread position:
               
400-685
               

               
Cow position:
               
chr21:31676574-31676298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
199, 49
               

               
Conread position:
               
401-710
               

               
Cow position:
               
chr21:40244519-40244209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 187
               

               
Conread position:
               
401-723
               

               
Cow position:
               
chr21:17714392-17714076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
164, 46
               

               
Conread position:
               
401-797
               

               
Cow position:
               
chr21:42190097-42190496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
283, 142
               

               
Conread position:
               
403-713
               

               
Cow position:
               
chr21:21480112-21480407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
196, 41
               

               
Conread position:
               
403-784
               

               
Cow position:
               
chr21:4568357-4567966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
151, 30
               

               
Conread position:
               
405-797
               

               
Cow position:
               
chr21:911896-912299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
194, 42
               

               
Conread position:
               
413-534
               

               
Cow position:
               
chr21:14228505-14228625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
122
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
413-667
               

               
Cow position:
               
chr21:28443311-28443557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
156, 46
               

               
Conread position:
               
413-722
               

               
Cow position:
               
chr21:30990216-30990505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
255, 13
               

               
Conread position:
               
415-713
               

               
Cow position:
               
chr21:18495030-18494747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
129, 10
               

               
Conread position:
               
416-689
               

               
Cow position:
               
chr21:21143960-21143677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
120, 28
               

               
Conread position:
               
418-713
               

               
Cow position:
               
chr21:40058864-40058578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
45, 27
               

               
Conread position:
               
430-662
               

               
Cow position:
               
chr21:10608406-10608629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
170, 14
               

               
Conread position:
               
431-712
               

               
Cow position:
               
chr21:42024170-42023908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
19, 40
               

               
Conread position:
               
434-718
               

               
Cow position:
               
chr21:13703640-13703919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
235, 36
               

               
Conread position:
               
439-713
               

               
Cow position:
               
chr21:7132426-7132690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
8, 42
               

               
Conread position:
               
440-667
               

               
Cow position:
               
chr21:45375660-45375438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
160, 19
               

               
Conread position:
               
440-713
               

               
Cow position:
               
chr21:33210240-33209971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
159, 19
               

               
Conread position:
               
445-713
               

               
Cow position:
               
chr21:9278415-9278140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
103, 84
               

               
Conread position:
               
449-718
               

               
Cow position:
               
chr21:48484417-48484672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
211, 80
               

               
Conread position:
               
450-687
               

               
Cow position:
               
chr21:13850036-13850274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
82, 125
               

               
Conread position:
               
451-718
               

               
Cow position:
               
chr21:34738638-34738366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 116
               

               
Conread position:
               
451-718
               

               
Cow position:
               
chr21:41957148-41957406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
217, 76
               

               
Conread position:
               
454-669
               

               
Cow position:
               
chr21:9998692-9998900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
110, 89
               

               
Conread position:
               
461-655
               

               
Cow position:
               
chr21:6765898-6765714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
71, 88
               

               
Conread position:
               
462-713
               

               
Cow position:
               
chr21:42348657-42348906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
131, 67
               

               
Conread position:
               
466-698
               

               
Cow position:
               
chr21:13303832-13303606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
203, 22
               

               
Conread position:
               
468-661
               

               
Cow position:
               
chr21:40065303-40065485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
81, 70
               

               
Conread position:
               
478-797
               

               
Cow position:
               
chr21:13163892-13163584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
121, 68
               

               
Conread position:
               
485-671
               

               
Cow position:
               
chr21:4268870-4268690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
118, 43
               

               
Conread position:
               
487-718
               

               
Cow position:
               
chr21:7716792-7717020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
61, 38
               

               
Conread position:
               
487-745
               

               
Cow position:
               
chr21:13763613-13763368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
77, 41
               

               
Conread position:
               
488-718
               

               
Cow position:
               
chr21:42465824-42465595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
42, 103
               

               
Conread position:
               
492-698
               

               
Cow position:
               
chr21:26241815-26241611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
57, 34
               

               
Conread position:
               
492-709
               

               
Cow position:
               
chr21:31159250-31159030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
107, 50
               

               
Conread position:
               
500-712
               

               
Cow position:
               
chr21:34254300-34254509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
99, 29
               

               
Conread position:
               
617-797
               

               
Cow position:
               
chr21:8896331-8896517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
713-797
               

               
Cow position:
               
chr21:34391220-34391304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
85
               

               
Alignm identity:
               
75
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               
Show alignments to all cow chromosomes.