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Cow genome map

           
Conread name:
           
LyN1-MLN01F030047
        

               
Conread position:
               
180-532
               

               
Cow position:
               
chr25:36835195-36835542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
28, 112
               

               
Conread position:
               
190-338
               

               
Cow position:
               
chr25:22119431-22119581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
39, 14
               

               
Conread position:
               
191-408
               

               
Cow position:
               
chr25:13542758-13542985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
13, 41
               

               
Conread position:
               
191-536
               

               
Cow position:
               
chr25:33557489-33557151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
117, 13
               

               
Conread position:
               
193-550
               

               
Cow position:
               
chr25:17474298-17474647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 6
               

               
Conread position:
               
196-339
               

               
Cow position:
               
chr25:19460295-19460148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
198-427
               

               
Cow position:
               
chr25:9573918-9574148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
139, 163
               

               
Conread position:
               
199-389
               

               
Cow position:
               
chr25:15349693-15349887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
157, 0
               

               
Conread position:
               
202-586
               

               
Cow position:
               
chr25:14720945-14720580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
94, 122
               

               
Conread position:
               
202-642
               

               
Cow position:
               
chr25:12899981-12899536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
13, 222
               

               
Conread position:
               
203-589
               

               
Cow position:
               
chr25:13295075-13294722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
134, 46
               

               
Conread position:
               
204-476
               

               
Cow position:
               
chr25:1840532-1840258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
73, 68
               

               
Conread position:
               
205-385
               

               
Cow position:
               
chr25:18934423-18934613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
205-421
               

               
Cow position:
               
chr25:2362035-2361825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
134, 83
               

               
Conread position:
               
205-586
               

               
Cow position:
               
chr25:37562912-37562535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
7, 199
               

               
Conread position:
               
205-667
               

               
Cow position:
               
chr25:24669243-24669674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
134, 18
               

               
Conread position:
               
205-687
               

               
Cow position:
               
chr25:37594596-37594146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 84
               

               
Conread position:
               
206-340
               

               
Cow position:
               
chr25:37981819-37981678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
88, 10
               

               
Conread position:
               
206-692
               

               
Cow position:
               
chr25:14513313-14512843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
498
               

               
Alignm identity:
               
364
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 14
               

               
Conread position:
               
206-785
               

               
Cow position:
               
chr25:18266351-18265802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
583
               

               
Alignm identity:
               
379
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
199, 17
               

               
Conread position:
               
207-382
               

               
Cow position:
               
chr25:7185062-7185250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
13, 182
               

               
Conread position:
               
207-439
               

               
Cow position:
               
chr25:36840589-36840366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
133, 9
               

               
Conread position:
               
207-478
               

               
Cow position:
               
chr25:36717118-36716857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
97, 13
               

               
Conread position:
               
207-713
               

               
Cow position:
               
chr25:21245384-21245900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
532
               

               
Alignm identity:
               
391
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 207
               

               
Conread position:
               
208-328
               

               
Cow position:
               
chr25:13732966-13732843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
86, 109
               

               
Conread position:
               
208-432
               

               
Cow position:
               
chr25:3744527-3744769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
55, 206
               

               
Conread position:
               
208-495
               

               
Cow position:
               
chr25:41130437-41130146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
87, 151
               

               
Conread position:
               
208-533
               

               
Cow position:
               
chr25:4489108-4488800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
117, 13
               

               
Conread position:
               
208-559
               

               
Cow position:
               
chr25:20664072-20664436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
84, 199
               

               
Conread position:
               
208-627
               

               
Cow position:
               
chr25:17704946-17704545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 88
               

               
Conread position:
               
208-689
               

               
Cow position:
               
chr25:11131768-11131315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
218, 77
               

               
Conread position:
               
209-301
               

               
Cow position:
               
chr25:12565183-12565276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
94
               

               
Alignm identity:
               
80
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
209-305
               

               
Cow position:
               
chr25:25582111-25582017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
97
               

               
Alignm identity:
               
82
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
209-333
               

               
Cow position:
               
chr25:23863043-23863165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
209-335
               

               
Cow position:
               
chr25:9494915-9494784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
209-335
               

               
Cow position:
               
chr25:28939933-28940062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
209-364
               

               
Cow position:
               
chr25:13565127-13565280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
13, 104
               

               
Conread position:
               
209-379
               

               
Cow position:
               
chr25:15305885-15305706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
75, 12
               

               
Conread position:
               
209-383
               

               
Cow position:
               
chr25:4157041-4157222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
125, 0
               

               
Conread position:
               
209-388
               

               
Cow position:
               
chr25:22154237-22154043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
209-388
               

               
Cow position:
               
chr25:24147750-24147927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
88, 93
               

               
Conread position:
               
209-389
               

               
Cow position:
               
chr25:19832206-19832020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
123, 0
               

               
Conread position:
               
209-390
               

               
Cow position:
               
chr25:28662313-28662127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
128, 76
               

               
Conread position:
               
209-391
               

               
Cow position:
               
chr25:1158949-1158763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
123, 89
               

               
Conread position:
               
209-391
               

               
Cow position:
               
chr25:1982779-1982966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
84, 40
               

               
Conread position:
               
209-391
               

               
Cow position:
               
chr25:5791507-5791701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
209-391
               

               
Cow position:
               
chr25:30551640-30551826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
24, 44
               

               
Conread position:
               
209-391
               

               
Cow position:
               
chr25:33100778-33100591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
128, 81
               

               
Conread position:
               
209-393
               

               
Cow position:
               
chr25:21547363-21547172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
89, 174
               

               
Conread position:
               
209-398
               

               
Cow position:
               
chr25:18551128-18551326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
83, 14
               

               
Conread position:
               
209-402
               

               
Cow position:
               
chr25:12223769-12223575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
125, 16
               

               
Conread position:
               
209-410
               

               
Cow position:
               
chr25:28945222-28945019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
119, 40
               

               
Conread position:
               
209-420
               

               
Cow position:
               
chr25:5808154-5807934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
83, 196
               

               
Conread position:
               
209-436
               

               
Cow position:
               
chr25:40682942-40682711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
114, 14
               

               
Conread position:
               
209-438
               

               
Cow position:
               
chr25:9769625-9769387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
93, 192
               

               
Conread position:
               
209-438
               

               
Cow position:
               
chr25:28597398-28597641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
209-440
               

               
Cow position:
               
chr25:9025331-9025095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
11, 122
               

               
Conread position:
               
209-440
               

               
Cow position:
               
chr25:17919183-17918943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
78, 56
               

               
Conread position:
               
209-441
               

               
Cow position:
               
chr25:35109073-35109301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
127, 22
               

               
Conread position:
               
209-442
               

               
Cow position:
               
chr25:7726871-7726629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
93, 194
               

               
Conread position:
               
209-445
               

               
Cow position:
               
chr25:10364149-10364370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
209-476
               

               
Cow position:
               
chr25:26160732-26160457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
45, 249
               

               
Conread position:
               
209-491
               

               
Cow position:
               
chr25:8345796-8346080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
93, 12
               

               
Conread position:
               
209-496
               

               
Cow position:
               
chr25:432842-433132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 40
               

               
Conread position:
               
209-500
               

               
Cow position:
               
chr25:12305485-12305189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 199
               

               
Conread position:
               
209-519
               

               
Cow position:
               
chr25:33686475-33686787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 200
               

               
Conread position:
               
209-525
               

               
Cow position:
               
chr25:1823885-1824207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 194
               

               
Conread position:
               
209-525
               

               
Cow position:
               
chr25:24207207-24207532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
76, 21
               

               
Conread position:
               
209-527
               

               
Cow position:
               
chr25:30852971-30852643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
125, 92
               

               
Conread position:
               
209-530
               

               
Cow position:
               
chr25:26136615-26136939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
95, 14
               

               
Conread position:
               
209-532
               

               
Cow position:
               
chr25:6292775-6292449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
76, 188
               

               
Conread position:
               
209-540
               

               
Cow position:
               
chr25:20157087-20157424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
79, 195
               

               
Conread position:
               
209-572
               

               
Cow position:
               
chr25:9002875-9002513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 95
               

               
Conread position:
               
209-591
               

               
Cow position:
               
chr25:17991388-17991758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
14, 33
               

               
Conread position:
               
209-600
               

               
Cow position:
               
chr25:15409717-15410102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
78, 14
               

               
Conread position:
               
209-618
               

               
Cow position:
               
chr25:12755285-12755686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 121
               

               
Conread position:
               
209-644
               

               
Cow position:
               
chr25:17914991-17914559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
14, 200
               

               
Conread position:
               
209-684
               

               
Cow position:
               
chr25:26701225-26700775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 14
               

               
Conread position:
               
209-689
               

               
Cow position:
               
chr25:35612094-35612571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
510
               

               
Alignm identity:
               
363
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 208
               

               
Conread position:
               
209-713
               

               
Cow position:
               
chr25:8120987-8120483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
519
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 153
               

               
Conread position:
               
209-713
               

               
Cow position:
               
chr25:23053769-23053262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
527
               

               
Alignm identity:
               
369
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 122
               

               
Conread position:
               
209-713
               

               
Cow position:
               
chr25:25753820-25754289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
511
               

               
Alignm identity:
               
362
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 14
               

               
Conread position:
               
209-713
               

               
Cow position:
               
chr25:33959044-33959554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
524
               

               
Alignm identity:
               
369
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 193
               

               
Conread position:
               
209-718
               

               
Cow position:
               
chr25:12098043-12097545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
519
               

               
Alignm identity:
               
371
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 189
               

               
Conread position:
               
210-321
               

               
Cow position:
               
chr25:20018351-20018236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
116
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
210-326
               

               
Cow position:
               
chr25:7358461-7358582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
122
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
210-331
               

               
Cow position:
               
chr25:16491302-16491181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
122
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
210-334
               

               
Cow position:
               
chr25:22917293-22917414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
88, 20
               

               
Conread position:
               
210-338
               

               
Cow position:
               
chr25:22642478-22642340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
210-370
               

               
Cow position:
               
chr25:9640828-9641000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
210-383
               

               
Cow position:
               
chr25:35802458-35802639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
85, 45
               

               
Conread position:
               
210-384
               

               
Cow position:
               
chr25:13304390-13304575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
210-388
               

               
Cow position:
               
chr25:3141706-3141522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
125, 31
               

               
Conread position:
               
210-394
               

               
Cow position:
               
chr25:7277120-7277312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
210-394
               

               
Cow position:
               
chr25:7403133-7403328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
210-395
               

               
Cow position:
               
chr25:31657075-31657266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
127, 88
               

               
Conread position:
               
210-402
               

               
Cow position:
               
chr25:40929797-40929998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
74, 193
               

               
Conread position:
               
210-406
               

               
Cow position:
               
chr25:2662600-2662402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
8, 172
               

               
Conread position:
               
210-406
               

               
Cow position:
               
chr25:14216010-14215790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
58, 176
               

               
Conread position:
               
210-408
               

               
Cow position:
               
chr25:36370026-36369820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
80, 192
               

               
Conread position:
               
210-408
               

               
Cow position:
               
chr25:36375717-36375511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
80, 192
               

               
Conread position:
               
210-410
               

               
Cow position:
               
chr25:5922509-5922704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
127, 60
               

               
Conread position:
               
210-421
               

               
Cow position:
               
chr25:20203112-20202901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
96, 15
               

               
Conread position:
               
210-422
               

               
Cow position:
               
chr25:36872850-36873069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
84, 191
               

               
Conread position:
               
210-424
               

               
Cow position:
               
chr25:2111241-2111034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
107, 100
               

               
Conread position:
               
210-431
               

               
Cow position:
               
chr25:23519832-23520049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
124, 45
               

               
Conread position:
               
210-436
               

               
Cow position:
               
chr25:10585124-10585347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
114, 42
               

               
Conread position:
               
210-439
               

               
Cow position:
               
chr25:37635634-37635864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
120, 80
               

               
Conread position:
               
210-440
               

               
Cow position:
               
chr25:536098-536337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
85, 199
               

               
Conread position:
               
210-440
               

               
Cow position:
               
chr25:12657101-12657340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
88, 193
               

               
Conread position:
               
210-441
               

               
Cow position:
               
chr25:33311118-33311359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
82, 197
               

               
Conread position:
               
210-442
               

               
Cow position:
               
chr25:26236307-26236544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
120, 189
               

               
Conread position:
               
210-444
               

               
Cow position:
               
chr25:27622321-27622082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
74, 174
               

               
Conread position:
               
210-456
               

               
Cow position:
               
chr25:26071541-26071280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
53, 204
               

               
Conread position:
               
210-469
               

               
Cow position:
               
chr25:24863073-24862820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
127, 88
               

               
Conread position:
               
210-476
               

               
Cow position:
               
chr25:21184091-21183818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
84, 193
               

               
Conread position:
               
210-479
               

               
Cow position:
               
chr25:33555812-33555542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
72, 13
               

               
Conread position:
               
210-509
               

               
Cow position:
               
chr25:26578395-26578707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
84, 62
               

               
Conread position:
               
210-521
               

               
Cow position:
               
chr25:24066483-24066765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
210-523
               

               
Cow position:
               
chr25:17725240-17724949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
80, 165
               

               
Conread position:
               
210-536
               

               
Cow position:
               
chr25:5921151-5920818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 31
               

               
Conread position:
               
210-536
               

               
Cow position:
               
chr25:7010765-7011093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
82, 108
               

               
Conread position:
               
210-536
               

               
Cow position:
               
chr25:8485278-8485615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
108, 198
               

               
Conread position:
               
210-536
               

               
Cow position:
               
chr25:11065934-11066268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
68, 206
               

               
Conread position:
               
210-595
               

               
Cow position:
               
chr25:26134251-26133852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 194
               

               
Conread position:
               
210-601
               

               
Cow position:
               
chr25:20047715-20047329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
85, 114
               

               
Conread position:
               
210-631
               

               
Cow position:
               
chr25:26089623-26090023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
338, 15
               

               
Conread position:
               
210-667
               

               
Cow position:
               
chr25:24405547-24405980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
389, 75
               

               
Conread position:
               
210-679
               

               
Cow position:
               
chr25:18487879-18487414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 200
               

               
Conread position:
               
210-686
               

               
Cow position:
               
chr25:14570552-14570106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
390, 26
               

               
Conread position:
               
210-688
               

               
Cow position:
               
chr25:22203484-22203959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
497
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 113
               

               
Conread position:
               
210-695
               

               
Cow position:
               
chr25:12260681-12261170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 193
               

               
Conread position:
               
210-698
               

               
Cow position:
               
chr25:1838448-1837961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
506
               

               
Alignm identity:
               
385
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 245
               

               
Conread position:
               
210-713
               

               
Cow position:
               
chr25:6473871-6474394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
534
               

               
Alignm identity:
               
389
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 204
               

               
Conread position:
               
210-713
               

               
Cow position:
               
chr25:6803753-6803270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
520
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
85, 189
               

               
Conread position:
               
210-713
               

               
Cow position:
               
chr25:18294111-18294608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
520
               

               
Alignm identity:
               
362
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 19
               

               
Conread position:
               
210-713
               

               
Cow position:
               
chr25:20059842-20060322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
516
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 161
               

               
Conread position:
               
210-713
               

               
Cow position:
               
chr25:26224831-26225333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
520
               

               
Alignm identity:
               
383
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 84
               

               
Conread position:
               
210-718
               

               
Cow position:
               
chr25:20008339-20007823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
528
               

               
Alignm identity:
               
373
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 188
               

               
Conread position:
               
210-718
               

               
Cow position:
               
chr25:22315410-22314903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
524
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
12, 190
               

               
Conread position:
               
210-718
               

               
Cow position:
               
chr25:24573263-24572774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
523
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 41
               

               
Conread position:
               
210-718
               

               
Cow position:
               
chr25:26087724-26087217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
524
               

               
Alignm identity:
               
403
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 89
               

               
Conread position:
               
210-718
               

               
Cow position:
               
chr25:33663704-33664194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
522
               

               
Alignm identity:
               
383
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 87
               

               
Conread position:
               
210-723
               

               
Cow position:
               
chr25:6463823-6464333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
529
               

               
Alignm identity:
               
387
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 160
               

               
Conread position:
               
211-389
               

               
Cow position:
               
chr25:14944924-14945111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
91, 31
               

               
Conread position:
               
211-391
               

               
Cow position:
               
chr25:37965468-37965273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
12, 105
               

               
Conread position:
               
211-404
               

               
Cow position:
               
chr25:7311190-7311392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
78, 21
               

               
Conread position:
               
211-432
               

               
Cow position:
               
chr25:14107041-14106809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
84, 171
               

               
Conread position:
               
211-435
               

               
Cow position:
               
chr25:18491240-18491012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
123, 12
               

               
Conread position:
               
211-439
               

               
Cow position:
               
chr25:6115234-6114996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
12, 161
               

               
Conread position:
               
211-439
               

               
Cow position:
               
chr25:11957008-11956774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 190
               

               
Conread position:
               
211-441
               

               
Cow position:
               
chr25:10656834-10657074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
98, 151
               

               
Conread position:
               
211-441
               

               
Cow position:
               
chr25:22698263-22698502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
12, 193
               

               
Conread position:
               
211-476
               

               
Cow position:
               
chr25:19478894-19478610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
87, 207
               

               
Conread position:
               
211-502
               

               
Cow position:
               
chr25:9968659-9968363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
73, 195
               

               
Conread position:
               
211-523
               

               
Cow position:
               
chr25:22317888-22317571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
83, 192
               

               
Conread position:
               
211-530
               

               
Cow position:
               
chr25:7817189-7816867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
98, 30
               

               
Conread position:
               
211-533
               

               
Cow position:
               
chr25:18201725-18202046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 39
               

               
Conread position:
               
211-533
               

               
Cow position:
               
chr25:20523036-20523350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
123, 11
               

               
Conread position:
               
211-535
               

               
Cow position:
               
chr25:7035764-7035433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
104, 197
               

               
Conread position:
               
211-536
               

               
Cow position:
               
chr25:30817096-30816763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 197
               

               
Conread position:
               
211-574
               

               
Cow position:
               
chr25:9316229-9315863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
12, 192
               

               
Conread position:
               
211-575
               

               
Cow position:
               
chr25:447957-448332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
85, 41
               

               
Conread position:
               
211-614
               

               
Cow position:
               
chr25:11316106-11315720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 107
               

               
Conread position:
               
211-664
               

               
Cow position:
               
chr25:21289553-21289099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 150
               

               
Conread position:
               
211-667
               

               
Cow position:
               
chr25:33457932-33457462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 10
               

               
Conread position:
               
211-702
               

               
Cow position:
               
chr25:20349078-20348575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
516
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 200
               

               
Conread position:
               
211-713
               

               
Cow position:
               
chr25:20069918-20069430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
521
               

               
Alignm identity:
               
375
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 52
               

               
Conread position:
               
211-786
               

               
Cow position:
               
chr25:18720924-18721489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
605
               

               
Alignm identity:
               
408
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
80, 20
               

               
Conread position:
               
211-797
               

               
Cow position:
               
chr25:11666830-11666264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
606
               

               
Alignm identity:
               
407
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
461, 50
               

               
Conread position:
               
212-321
               

               
Cow position:
               
chr25:6940289-6940395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
110
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
212-330
               

               
Cow position:
               
chr25:20223549-20223664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
212-338
               

               
Cow position:
               
chr25:37648985-37648857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
212-385
               

               
Cow position:
               
chr25:26989403-26989219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
85, 13
               

               
Conread position:
               
212-389
               

               
Cow position:
               
chr25:27916204-27916033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
123, 64
               

               
Conread position:
               
212-390
               

               
Cow position:
               
chr25:31926181-31926360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
118, 82
               

               
Conread position:
               
212-391
               

               
Cow position:
               
chr25:24115114-24115300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
86, 9
               

               
Conread position:
               
212-394
               

               
Cow position:
               
chr25:17724017-17724211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
212-435
               

               
Cow position:
               
chr25:11780467-11780252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
131, 78
               

               
Conread position:
               
212-441
               

               
Cow position:
               
chr25:18929005-18929224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
212-441
               

               
Cow position:
               
chr25:22348257-22348495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
83, 9
               

               
Conread position:
               
212-493
               

               
Cow position:
               
chr25:35762790-35762511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
80, 11
               

               
Conread position:
               
212-499
               

               
Cow position:
               
chr25:13621161-13621445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
127, 10
               

               
Conread position:
               
212-533
               

               
Cow position:
               
chr25:21893535-21893216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 9
               

               
Conread position:
               
212-540
               

               
Cow position:
               
chr25:9843382-9843049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
60, 9
               

               
Conread position:
               
212-573
               

               
Cow position:
               
chr25:26679428-26679065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
76, 9
               

               
Conread position:
               
212-625
               

               
Cow position:
               
chr25:7750648-7750248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
127, 9
               

               
Conread position:
               
212-667
               

               
Cow position:
               
chr25:33550714-33550262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 79
               

               
Conread position:
               
212-689
               

               
Cow position:
               
chr25:14833466-14833923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
72, 19
               

               
Conread position:
               
212-713
               

               
Cow position:
               
chr25:2414998-2414543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
92, 9
               

               
Conread position:
               
212-713
               

               
Cow position:
               
chr25:27869014-27868516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
518
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 40
               

               
Conread position:
               
212-713
               

               
Cow position:
               
chr25:35348108-35347608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
523
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
111, 19
               

               
Conread position:
               
213-335
               

               
Cow position:
               
chr25:17141305-17141181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
213-380
               

               
Cow position:
               
chr25:20063462-20063301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
43, 85
               

               
Conread position:
               
213-385
               

               
Cow position:
               
chr25:41330573-41330405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
77, 36
               

               
Conread position:
               
213-429
               

               
Cow position:
               
chr25:20085780-20085551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
213-429
               

               
Cow position:
               
chr25:33101411-33101625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
129, 20
               

               
Conread position:
               
213-440
               

               
Cow position:
               
chr25:11897417-11897658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
79, 166
               

               
Conread position:
               
213-440
               

               
Cow position:
               
chr25:18760509-18760739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
129, 77
               

               
Conread position:
               
213-455
               

               
Cow position:
               
chr25:12206742-12206495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
71, 186
               

               
Conread position:
               
213-457
               

               
Cow position:
               
chr25:20487233-20487492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
213-532
               

               
Cow position:
               
chr25:22346985-22346655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
54, 60
               

               
Conread position:
               
213-532
               

               
Cow position:
               
chr25:36020613-36020287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
72, 55
               

               
Conread position:
               
213-533
               

               
Cow position:
               
chr25:22731027-22730715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 84
               

               
Conread position:
               
213-586
               

               
Cow position:
               
chr25:34768547-34768896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
213-709
               

               
Cow position:
               
chr25:16921591-16922082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
512
               

               
Alignm identity:
               
394
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 191
               

               
Conread position:
               
213-713
               

               
Cow position:
               
chr25:10407209-10407712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
519
               

               
Alignm identity:
               
359
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 249
               

               
Conread position:
               
213-713
               

               
Cow position:
               
chr25:30319246-30319743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
521
               

               
Alignm identity:
               
394
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 177
               

               
Conread position:
               
213-745
               

               
Cow position:
               
chr25:7217018-7216499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
548
               

               
Alignm identity:
               
399
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 17
               

               
Conread position:
               
213-745
               

               
Cow position:
               
chr25:27821633-27821087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
569
               

               
Alignm identity:
               
374
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
34, 178
               

               
Conread position:
               
214-388
               

               
Cow position:
               
chr25:22768419-22768237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
81, 36
               

               
Conread position:
               
214-388
               

               
Cow position:
               
chr25:32745536-32745357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
128, 82
               

               
Conread position:
               
214-532
               

               
Cow position:
               
chr25:30619269-30618946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 9
               

               
Conread position:
               
214-570
               

               
Cow position:
               
chr25:5713065-5713419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
214-713
               

               
Cow position:
               
chr25:40956805-40957280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
506
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
294, 68
               

               
Conread position:
               
214-792
               

               
Cow position:
               
chr25:36082071-36081499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
595
               

               
Alignm identity:
               
430
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 104
               

               
Conread position:
               
215-333
               

               
Cow position:
               
chr25:28856638-28856519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
215-387
               

               
Cow position:
               
chr25:4192207-4192024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
215-525
               

               
Cow position:
               
chr25:36555499-36555801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 52
               

               
Conread position:
               
215-559
               

               
Cow position:
               
chr25:14931551-14931902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
96, 136
               

               
Conread position:
               
215-667
               

               
Cow position:
               
chr25:5846605-5847050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 194
               

               
Conread position:
               
215-667
               

               
Cow position:
               
chr25:12293540-12293995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 196
               

               
Conread position:
               
215-709
               

               
Cow position:
               
chr25:10504135-10504626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
516
               

               
Alignm identity:
               
359
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 64
               

               
Conread position:
               
215-713
               

               
Cow position:
               
chr25:13445716-13446214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
513
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
87, 139
               

               
Conread position:
               
215-713
               

               
Cow position:
               
chr25:19130054-19129572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
509
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 189
               

               
Conread position:
               
216-335
               

               
Cow position:
               
chr25:18480859-18480742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
121
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
113, 28
               

               
Conread position:
               
216-358
               

               
Cow position:
               
chr25:12092818-12092668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
216-366
               

               
Cow position:
               
chr25:33272837-33272674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
216-373
               

               
Cow position:
               
chr25:15999351-15999518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
68, 104
               

               
Conread position:
               
216-378
               

               
Cow position:
               
chr25:38987357-38987200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
132, 72
               

               
Conread position:
               
216-436
               

               
Cow position:
               
chr25:1925413-1925619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
8, 80
               

               
Conread position:
               
216-436
               

               
Cow position:
               
chr25:9461777-9461558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
7, 178
               

               
Conread position:
               
216-437
               

               
Cow position:
               
chr25:22298831-22298609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
121, 182
               

               
Conread position:
               
216-444
               

               
Cow position:
               
chr25:9616037-9615802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
82, 191
               

               
Conread position:
               
216-533
               

               
Cow position:
               
chr25:4245864-4245570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
216-533
               

               
Cow position:
               
chr25:21668447-21668126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
118, 183
               

               
Conread position:
               
216-538
               

               
Cow position:
               
chr25:41150765-41151085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
98, 191
               

               
Conread position:
               
216-539
               

               
Cow position:
               
chr25:14152387-14152060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
78, 182
               

               
Conread position:
               
216-568
               

               
Cow position:
               
chr25:31732134-31732492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
180, 80
               

               
Conread position:
               
216-586
               

               
Cow position:
               
chr25:18894512-18894895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
76, 153
               

               
Conread position:
               
216-629
               

               
Cow position:
               
chr25:13272768-13272363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 184
               

               
Conread position:
               
216-682
               

               
Cow position:
               
chr25:12778362-12778797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
383, 30
               

               
Conread position:
               
216-713
               

               
Cow position:
               
chr25:10643117-10643602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
513
               

               
Alignm identity:
               
376
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 81
               

               
Conread position:
               
216-713
               

               
Cow position:
               
chr25:21192742-21193237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
507
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
213, 140
               

               
Conread position:
               
216-713
               

               
Cow position:
               
chr25:26655091-26654613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
503
               

               
Alignm identity:
               
376
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
347, 81
               

               
Conread position:
               
216-718
               

               
Cow position:
               
chr25:14791953-14791458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
512
               

               
Alignm identity:
               
373
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 181
               

               
Conread position:
               
216-736
               

               
Cow position:
               
chr25:36746249-36746762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
534
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
87, 176
               

               
Conread position:
               
217-391
               

               
Cow position:
               
chr25:9023943-9023767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
117, 83
               

               
Conread position:
               
217-394
               

               
Cow position:
               
chr25:22373288-22373477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
217-400
               

               
Cow position:
               
chr25:15447690-15447503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
120, 19
               

               
Conread position:
               
217-410
               

               
Cow position:
               
chr25:35564125-35563927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
6, 157
               

               
Conread position:
               
217-440
               

               
Cow position:
               
chr25:19069634-19069863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
75, 38
               

               
Conread position:
               
217-442
               

               
Cow position:
               
chr25:8599269-8599057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
217-518
               

               
Cow position:
               
chr25:28987060-28986760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
67, 173
               

               
Conread position:
               
217-578
               

               
Cow position:
               
chr25:6996983-6996620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 184
               

               
Conread position:
               
217-658
               

               
Cow position:
               
chr25:26338658-26338210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 20
               

               
Conread position:
               
217-661
               

               
Cow position:
               
chr25:1763282-1762869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 73
               

               
Conread position:
               
217-667
               

               
Cow position:
               
chr25:38135951-38135503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 191
               

               
Conread position:
               
217-669
               

               
Cow position:
               
chr25:19679549-19679096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 14
               

               
Conread position:
               
217-678
               

               
Cow position:
               
chr25:7306488-7306039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 99
               

               
Conread position:
               
217-713
               

               
Cow position:
               
chr25:11585727-11585217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
527
               

               
Alignm identity:
               
372
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 199
               

               
Conread position:
               
218-314
               

               
Cow position:
               
chr25:32666451-32666352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
100
               

               
Alignm identity:
               
85
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
218-325
               

               
Cow position:
               
chr25:19301598-19301491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
108
               

               
Alignm identity:
               
89
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
218-338
               

               
Cow position:
               
chr25:7864528-7864409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
121
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
218-391
               

               
Cow position:
               
chr25:22565769-22565942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
116, 32
               

               
Conread position:
               
218-391
               

               
Cow position:
               
chr25:36156009-36155834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
14, 81
               

               
Conread position:
               
218-404
               

               
Cow position:
               
chr25:26269517-26269713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
76, 186
               

               
Conread position:
               
218-405
               

               
Cow position:
               
chr25:14164395-14164197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
63, 178
               

               
Conread position:
               
218-437
               

               
Cow position:
               
chr25:13823522-13823747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
91, 185
               

               
Conread position:
               
218-497
               

               
Cow position:
               
chr25:35052421-35052705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 194
               

               
Conread position:
               
218-510
               

               
Cow position:
               
chr25:20143354-20143644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
71, 108
               

               
Conread position:
               
218-525
               

               
Cow position:
               
chr25:25716842-25716540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
79, 103
               

               
Conread position:
               
218-533
               

               
Cow position:
               
chr25:4521644-4521954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
79, 159
               

               
Conread position:
               
218-589
               

               
Cow position:
               
chr25:27532476-27532852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
73, 34
               

               
Conread position:
               
218-654
               

               
Cow position:
               
chr25:20785390-20785815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 34
               

               
Conread position:
               
218-660
               

               
Cow position:
               
chr25:13380401-13380853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 246
               

               
Conread position:
               
218-713
               

               
Cow position:
               
chr25:11436627-11437096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
503
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
221, 79
               

               
Conread position:
               
219-416
               

               
Cow position:
               
chr25:23998743-23998931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
219-441
               

               
Cow position:
               
chr25:14225563-14225331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
73, 186
               

               
Conread position:
               
219-578
               

               
Cow position:
               
chr25:30462125-30462467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
73, 30
               

               
Conread position:
               
219-583
               

               
Cow position:
               
chr25:27801475-27801118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 165
               

               
Conread position:
               
221-394
               

               
Cow position:
               
chr25:11857792-11857974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
114, 0
               

               
Conread position:
               
221-436
               

               
Cow position:
               
chr25:33776254-33776039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
38, 182
               

               
Conread position:
               
221-438
               

               
Cow position:
               
chr25:18288576-18288797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
116, 174
               

               
Conread position:
               
221-443
               

               
Cow position:
               
chr25:9939063-9939290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
64, 109
               

               
Conread position:
               
221-690
               

               
Cow position:
               
chr25:9269534-9269107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
115, 77
               

               
Conread position:
               
221-708
               

               
Cow position:
               
chr25:20076673-20076204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
498
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
378, 64
               

               
Conread position:
               
222-374
               

               
Cow position:
               
chr25:8410840-8411001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
69, 59
               

               
Conread position:
               
222-390
               

               
Cow position:
               
chr25:10817233-10817405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
26, 71
               

               
Conread position:
               
222-420
               

               
Cow position:
               
chr25:31514377-31514170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
74, 181
               

               
Conread position:
               
222-424
               

               
Cow position:
               
chr25:10791626-10791829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
115, 66
               

               
Conread position:
               
222-465
               

               
Cow position:
               
chr25:17403669-17403432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
112, 80
               

               
Conread position:
               
222-512
               

               
Cow position:
               
chr25:6928323-6928607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
30, 65
               

               
Conread position:
               
222-534
               

               
Cow position:
               
chr25:24651264-24651571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
142, 178
               

               
Conread position:
               
222-680
               

               
Cow position:
               
chr25:11139834-11139389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
73, 177
               

               
Conread position:
               
222-719
               

               
Cow position:
               
chr25:17658805-17658316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
512
               

               
Alignm identity:
               
379
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 179
               

               
Conread position:
               
222-727
               

               
Cow position:
               
chr25:8576867-8576383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
514
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
205, 61
               

               
Conread position:
               
223-470
               

               
Cow position:
               
chr25:21500850-21501109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
70, 58
               

               
Conread position:
               
223-537
               

               
Cow position:
               
chr25:17119936-17119621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 182
               

               
Conread position:
               
224-466
               

               
Cow position:
               
chr25:26306012-26306259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
74, 169
               

               
Conread position:
               
225-408
               

               
Cow position:
               
chr25:26061534-26061730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
225-438
               

               
Cow position:
               
chr25:30247627-30247839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
20, 106
               

               
Conread position:
               
228-455
               

               
Cow position:
               
chr25:35339003-35339232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
109, 173
               

               
Conread position:
               
229-682
               

               
Cow position:
               
chr25:17566777-17566324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 39
               

               
Conread position:
               
229-688
               

               
Cow position:
               
chr25:36535232-36535701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 26
               

               
Conread position:
               
230-333
               

               
Cow position:
               
chr25:7475631-7475530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
104
               

               
Alignm identity:
               
88
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
230-384
               

               
Cow position:
               
chr25:7684714-7684875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
230-433
               

               
Cow position:
               
chr25:36873152-36873357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
107, 68
               

               
Conread position:
               
230-435
               

               
Cow position:
               
chr25:21317233-21317454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
59, 152
               

               
Conread position:
               
230-439
               

               
Cow position:
               
chr25:6259069-6258853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
90, 73
               

               
Conread position:
               
230-439
               

               
Cow position:
               
chr25:26072378-26072587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
107, 73
               

               
Conread position:
               
230-440
               

               
Cow position:
               
chr25:16372738-16372520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
230-510
               

               
Cow position:
               
chr25:13325754-13325484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
107, 53
               

               
Conread position:
               
230-519
               

               
Cow position:
               
chr25:13443222-13443519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 169
               

               
Conread position:
               
230-532
               

               
Cow position:
               
chr25:11432767-11433072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
104, 46
               

               
Conread position:
               
230-532
               

               
Cow position:
               
chr25:22756797-22756491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
59, 173
               

               
Conread position:
               
230-533
               

               
Cow position:
               
chr25:7380653-7380958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
65, 21
               

               
Conread position:
               
230-535
               

               
Cow position:
               
chr25:19363875-19364183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
107, 172
               

               
Conread position:
               
230-535
               

               
Cow position:
               
chr25:22242134-22241859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
49, 61
               

               
Conread position:
               
230-559
               

               
Cow position:
               
chr25:7673492-7673141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
25, 214
               

               
Conread position:
               
230-629
               

               
Cow position:
               
chr25:40904642-40905035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 173
               

               
Conread position:
               
230-690
               

               
Cow position:
               
chr25:40321111-40321563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 23
               

               
Conread position:
               
230-712
               

               
Cow position:
               
chr25:20402524-20403012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
498
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 23
               

               
Conread position:
               
230-728
               

               
Cow position:
               
chr25:20023209-20023707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
517
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 48
               

               
Conread position:
               
231-344
               

               
Cow position:
               
chr25:12817837-12817719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
231-488
               

               
Cow position:
               
chr25:34788085-34788338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
144, 53
               

               
Conread position:
               
231-718
               

               
Cow position:
               
chr25:23828946-23829412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
500
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
67, 81
               

               
Conread position:
               
232-340
               

               
Cow position:
               
chr25:22571142-22571032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
111
               

               
Alignm identity:
               
91
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
232-381
               

               
Cow position:
               
chr25:7623005-7622845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
232-394
               

               
Cow position:
               
chr25:26156602-26156764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
98, 56
               

               
Conread position:
               
232-405
               

               
Cow position:
               
chr25:18646763-18646589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
105, 54
               

               
Conread position:
               
232-406
               

               
Cow position:
               
chr25:23323680-23323491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
232-540
               

               
Cow position:
               
chr25:36872546-36872235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
52, 177
               

               
Conread position:
               
232-578
               

               
Cow position:
               
chr25:23244821-23245167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 69
               

               
Conread position:
               
232-713
               

               
Cow position:
               
chr25:7641272-7641747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 56
               

               
Conread position:
               
233-441
               

               
Cow position:
               
chr25:13223080-13222868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
98, 76
               

               
Conread position:
               
233-583
               

               
Cow position:
               
chr25:23779151-23779487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
101, 68
               

               
Conread position:
               
233-718
               

               
Cow position:
               
chr25:11661648-11662113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 16
               

               
Conread position:
               
234-381
               

               
Cow position:
               
chr25:11855366-11855523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
58, 135
               

               
Conread position:
               
234-389
               

               
Cow position:
               
chr25:8347834-8347670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
234-391
               

               
Cow position:
               
chr25:22734187-22734024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
105, 0
               

               
Conread position:
               
234-516
               

               
Cow position:
               
chr25:17190573-17190847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
99, 76
               

               
Conread position:
               
234-533
               

               
Cow position:
               
chr25:3373206-3373492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
80, 63
               

               
Conread position:
               
234-650
               

               
Cow position:
               
chr25:2624975-2624576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
100, 142
               

               
Conread position:
               
235-376
               

               
Cow position:
               
chr25:447726-447872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
99, 55
               

               
Conread position:
               
235-389
               

               
Cow position:
               
chr25:31705407-31705242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
235-440
               

               
Cow position:
               
chr25:9107353-9107555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
63, 14
               

               
Conread position:
               
235-709
               

               
Cow position:
               
chr25:16867425-16866942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
506
               

               
Alignm identity:
               
363
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 177
               

               
Conread position:
               
236-615
               

               
Cow position:
               
chr25:17342640-17342257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 171
               

               
Conread position:
               
237-497
               

               
Cow position:
               
chr25:7806146-7805880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
61, 166
               

               
Conread position:
               
237-499
               

               
Cow position:
               
chr25:12807221-12806958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
57, 164
               

               
Conread position:
               
237-536
               

               
Cow position:
               
chr25:35181091-35180807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
93, 162
               

               
Conread position:
               
241-433
               

               
Cow position:
               
chr25:6718080-6718270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
79, 57
               

               
Conread position:
               
241-683
               

               
Cow position:
               
chr25:18075840-18075405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
54, 157
               

               
Conread position:
               
243-537
               

               
Cow position:
               
chr25:15634294-15634597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
52, 157
               

               
Conread position:
               
243-586
               

               
Cow position:
               
chr25:8157337-8157682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 114
               

               
Conread position:
               
245-698
               

               
Cow position:
               
chr25:788427-787990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 75
               

               
Conread position:
               
246-409
               

               
Cow position:
               
chr25:10138491-10138318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
49, 136
               

               
Conread position:
               
247-670
               

               
Cow position:
               
chr25:41132198-41132602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
45, 147
               

               
Conread position:
               
247-712
               

               
Cow position:
               
chr25:16065050-16064604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
421, 16
               

               
Conread position:
               
248-374
               

               
Cow position:
               
chr25:18568047-18568184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
248-442
               

               
Cow position:
               
chr25:5701929-5701726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
47, 80
               

               
Conread position:
               
248-713
               

               
Cow position:
               
chr25:15715039-15714587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
86, 141
               

               
Conread position:
               
249-409
               

               
Cow position:
               
chr25:13049134-13049302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
46, 148
               

               
Conread position:
               
249-440
               

               
Cow position:
               
chr25:4937542-4937357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
123, 0
               

               
Conread position:
               
261-658
               

               
Cow position:
               
chr25:25861190-25861594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 212
               

               
Conread position:
               
262-681
               

               
Cow position:
               
chr25:18988533-18988118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
197, 41
               

               
Conread position:
               
263-574
               

               
Cow position:
               
chr25:34978716-34979028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
40, 121
               

               
Conread position:
               
263-653
               

               
Cow position:
               
chr25:10217901-10218281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 14
               

               
Conread position:
               
265-513
               

               
Cow position:
               
chr25:30450185-30449942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 87
               

               
Conread position:
               
265-540
               

               
Cow position:
               
chr25:7013579-7013849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
9, 44
               

               
Conread position:
               
270-685
               

               
Cow position:
               
chr25:28187801-28188216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 134
               

               
Conread position:
               
277-531
               

               
Cow position:
               
chr25:33978081-33978332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
12, 38
               

               
Conread position:
               
279-527
               

               
Cow position:
               
chr25:14118219-14117979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
34, 19
               

               
Conread position:
               
283-586
               

               
Cow position:
               
chr25:18906016-18905709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 121
               

               
Conread position:
               
283-677
               

               
Cow position:
               
chr25:7581295-7581685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 126
               

               
Conread position:
               
284-439
               

               
Cow position:
               
chr25:26161098-26160935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
53, 6
               

               
Conread position:
               
284-441
               

               
Cow position:
               
chr25:31762477-31762640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
25, 122
               

               
Conread position:
               
284-472
               

               
Cow position:
               
chr25:38421794-38421607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
53, 14
               

               
Conread position:
               
284-499
               

               
Cow position:
               
chr25:20447701-20447485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
59, 132
               

               
Conread position:
               
284-530
               

               
Cow position:
               
chr25:12252681-12252929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
53, 14
               

               
Conread position:
               
284-532
               

               
Cow position:
               
chr25:36017663-36017419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
58, 85
               

               
Conread position:
               
284-601
               

               
Cow position:
               
chr25:22750876-22751190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
18, 123
               

               
Conread position:
               
284-686
               

               
Cow position:
               
chr25:14196991-14196588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 168
               

               
Conread position:
               
284-709
               

               
Cow position:
               
chr25:22531411-22530997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 108
               

               
Conread position:
               
285-507
               

               
Cow position:
               
chr25:36120627-36120408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
52, 117
               

               
Conread position:
               
285-511
               

               
Cow position:
               
chr25:34241974-34242195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
17, 115
               

               
Conread position:
               
285-667
               

               
Cow position:
               
chr25:31230119-31230467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
58, 23
               

               
Conread position:
               
285-685
               

               
Cow position:
               
chr25:24452035-24452434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
16, 39
               

               
Conread position:
               
286-439
               

               
Cow position:
               
chr25:4009221-4009063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
51, 113
               

               
Conread position:
               
286-439
               

               
Cow position:
               
chr25:20862581-20862428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
57, 113
               

               
Conread position:
               
286-575
               

               
Cow position:
               
chr25:17177925-17177620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
55, 175
               

               
Conread position:
               
286-713
               

               
Cow position:
               
chr25:3145971-3145552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 116
               

               
Conread position:
               
287-500
               

               
Cow position:
               
chr25:26052030-26051814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
16, 28
               

               
Conread position:
               
287-586
               

               
Cow position:
               
chr25:15440655-15440956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
47, 123
               

               
Conread position:
               
287-659
               

               
Cow position:
               
chr25:61777-61421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 116
               

               
Conread position:
               
287-687
               

               
Cow position:
               
chr25:38982220-38981845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
51, 91
               

               
Conread position:
               
289-701
               

               
Cow position:
               
chr25:22296909-22297296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
380, 10
               

               
Conread position:
               
289-709
               

               
Cow position:
               
chr25:21894759-21895177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 76
               

               
Conread position:
               
289-718
               

               
Cow position:
               
chr25:13569051-13569465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 93
               

               
Conread position:
               
290-718
               

               
Cow position:
               
chr25:21951254-21950828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 167
               

               
Conread position:
               
291-493
               

               
Cow position:
               
chr25:11679249-11679064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
291-534
               

               
Cow position:
               
chr25:5474107-5474345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
46, 113
               

               
Conread position:
               
292-438
               

               
Cow position:
               
chr25:30656527-30656675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
45, 88
               

               
Conread position:
               
292-774
               

               
Cow position:
               
chr25:36762227-36761735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
512
               

               
Alignm identity:
               
365
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 110
               

               
Conread position:
               
294-686
               

               
Cow position:
               
chr25:21267107-21266739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
46, 101
               

               
Conread position:
               
296-576
               

               
Cow position:
               
chr25:20133197-20133478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
46, 19
               

               
Conread position:
               
299-562
               

               
Cow position:
               
chr25:12997720-12997450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
39, 165
               

               
Conread position:
               
299-586
               

               
Cow position:
               
chr25:13672518-13672216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
39, 115
               

               
Conread position:
               
299-681
               

               
Cow position:
               
chr25:12840603-12840976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 105
               

               
Conread position:
               
300-436
               

               
Cow position:
               
chr25:13503548-13503406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
25, 103
               

               
Conread position:
               
300-542
               

               
Cow position:
               
chr25:14157740-14157494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
10, 103
               

               
Conread position:
               
301-446
               

               
Cow position:
               
chr25:35090456-35090611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
301-527
               

               
Cow position:
               
chr25:13139923-13139706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
176, 36
               

               
Conread position:
               
301-713
               

               
Cow position:
               
chr25:18564599-18564201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 84
               

               
Conread position:
               
304-533
               

               
Cow position:
               
chr25:8961880-8961654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
32, 79
               

               
Conread position:
               
304-701
               

               
Cow position:
               
chr25:41363041-41363426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
39, 11
               

               
Conread position:
               
305-500
               

               
Cow position:
               
chr25:23817731-23817935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
32, 97
               

               
Conread position:
               
322-653
               

               
Cow position:
               
chr25:38425449-38425135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
22, 78
               

               
Conread position:
               
333-519
               

               
Cow position:
               
chr25:13384525-13384348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
333-656
               

               
Cow position:
               
chr25:6961079-6961383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
333-689
               

               
Cow position:
               
chr25:36036705-36037050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
266, 59
               

               
Conread position:
               
333-718
               

               
Cow position:
               
chr25:12817439-12817075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
215, 43
               

               
Conread position:
               
334-532
               

               
Cow position:
               
chr25:20216906-20216715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
334-578
               

               
Cow position:
               
chr25:19317338-19317094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 37
               

               
Conread position:
               
334-686
               

               
Cow position:
               
chr25:6885898-6886244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
265, 58
               

               
Conread position:
               
336-534
               

               
Cow position:
               
chr25:6688016-6687829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
336-722
               

               
Cow position:
               
chr25:2046489-2046853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
40, 31
               

               
Conread position:
               
343-583
               

               
Cow position:
               
chr25:17144492-17144254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
27, 21
               

               
Conread position:
               
343-629
               

               
Cow position:
               
chr25:16714205-16714480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
205, 54
               

               
Conread position:
               
343-664
               

               
Cow position:
               
chr25:15377390-15377092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
343-784
               

               
Cow position:
               
chr25:9349219-9349649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
200, 55
               

               
Conread position:
               
346-583
               

               
Cow position:
               
chr25:5407803-5407570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
347-478
               

               
Cow position:
               
chr25:16361612-16361741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
349-588
               

               
Cow position:
               
chr25:12081264-12081494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
206, 45
               

               
Conread position:
               
351-539
               

               
Cow position:
               
chr25:24504445-24504623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
359-709
               

               
Cow position:
               
chr25:9956990-9957324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
309, 49
               

               
Conread position:
               
360-600
               

               
Cow position:
               
chr25:9754049-9754276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
204, 37
               

               
Conread position:
               
360-713
               

               
Cow position:
               
chr25:1735274-1735604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
188, 11
               

               
Conread position:
               
368-583
               

               
Cow position:
               
chr25:8560908-8560694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
60, 27
               

               
Conread position:
               
370-714
               

               
Cow position:
               
chr25:12239110-12239432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
229, 27
               

               
Conread position:
               
373-745
               

               
Cow position:
               
chr25:36779535-36779173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
220, 19
               

               
Conread position:
               
376-713
               

               
Cow position:
               
chr25:25827502-25827167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
173, 19
               

               
Conread position:
               
376-797
               

               
Cow position:
               
chr25:15319951-15319526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
292, 17
               

               
Conread position:
               
377-533
               

               
Cow position:
               
chr25:13640414-13640264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
9, 28
               

               
Conread position:
               
377-712
               

               
Cow position:
               
chr25:9023665-9023352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
292, 66
               

               
Conread position:
               
381-525
               

               
Cow position:
               
chr25:7299182-7299330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
382-629
               

               
Cow position:
               
chr25:26269912-26270140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
217, 13
               

               
Conread position:
               
385-718
               

               
Cow position:
               
chr25:31732712-31733034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
161, 9
               

               
Conread position:
               
386-536
               

               
Cow position:
               
chr25:22332786-22332642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
387-609
               

               
Cow position:
               
chr25:5271767-5271556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
161, 57
               

               
Conread position:
               
387-786
               

               
Cow position:
               
chr25:36124707-36124307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
72, 57
               

               
Conread position:
               
388-542
               

               
Cow position:
               
chr25:21042407-21042255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
139, 0
               

               
Conread position:
               
388-597
               

               
Cow position:
               
chr25:31705024-31704820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
393-667
               

               
Cow position:
               
chr25:8918260-8918522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
206, 54
               

               
Conread position:
               
395-520
               

               
Cow position:
               
chr25:21926542-21926664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
395-533
               

               
Cow position:
               
chr25:32587864-32587999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
134, 48
               

               
Conread position:
               
395-556
               

               
Cow position:
               
chr25:6943096-6943254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
132, 48
               

               
Conread position:
               
395-587
               

               
Cow position:
               
chr25:23323214-23323029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
155, 42
               

               
Conread position:
               
395-667
               

               
Cow position:
               
chr25:4002816-4002552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
151, 52
               

               
Conread position:
               
395-681
               

               
Cow position:
               
chr25:9961159-9961440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
125, 42
               

               
Conread position:
               
395-688
               

               
Cow position:
               
chr25:12824003-12824284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
172, 54
               

               
Conread position:
               
395-689
               

               
Cow position:
               
chr25:35625170-35625441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
204, 49
               

               
Conread position:
               
395-713
               

               
Cow position:
               
chr25:5515028-5514715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
204, 64
               

               
Conread position:
               
397-572
               

               
Cow position:
               
chr25:14945438-14945610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
74, 46
               

               
Conread position:
               
397-667
               

               
Cow position:
               
chr25:16001513-16001765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
202, 48
               

               
Conread position:
               
397-678
               

               
Cow position:
               
chr25:13642300-13642575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
202, 47
               

               
Conread position:
               
398-586
               

               
Cow position:
               
chr25:3983051-3982872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
157, 20
               

               
Conread position:
               
398-653
               

               
Cow position:
               
chr25:36033449-36033206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
146, 28
               

               
Conread position:
               
398-682
               

               
Cow position:
               
chr25:26058596-26058322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
160, 28
               

               
Conread position:
               
398-718
               

               
Cow position:
               
chr25:12204487-12204172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 147
               

               
Conread position:
               
399-713
               

               
Cow position:
               
chr25:10138104-10137813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
200, 44
               

               
Conread position:
               
402-517
               

               
Cow position:
               
chr25:24847869-24847987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
404-520
               

               
Cow position:
               
chr25:12691673-12691790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
118
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
404-533
               

               
Cow position:
               
chr25:35333164-35333039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
405-662
               

               
Cow position:
               
chr25:7329553-7329305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
188, 44
               

               
Conread position:
               
432-718
               

               
Cow position:
               
chr25:8347488-8347211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
114, 11
               

               
Conread position:
               
437-669
               

               
Cow position:
               
chr25:36026985-36026761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
117, 0
               

               
Conread position:
               
446-655
               

               
Cow position:
               
chr25:6255969-6256170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
40, 24
               

               
Conread position:
               
449-697
               

               
Cow position:
               
chr25:10365788-10366030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
144, 35
               

               
Conread position:
               
449-706
               

               
Cow position:
               
chr25:6424623-6424872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
151, 59
               

               
Conread position:
               
449-713
               

               
Cow position:
               
chr25:2111032-2110789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
219, 33
               

               
Conread position:
               
449-713
               

               
Cow position:
               
chr25:33839343-33839094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
220, 12
               

               
Conread position:
               
451-616
               

               
Cow position:
               
chr25:35110163-35110323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
119, 79
               

               
Conread position:
               
451-782
               

               
Cow position:
               
chr25:27504215-27504561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
97, 51
               

               
Conread position:
               
457-697
               

               
Cow position:
               
chr25:35607764-35607997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
14, 41
               

               
Conread position:
               
461-670
               

               
Cow position:
               
chr25:24008222-24008424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
138, 68
               

               
Conread position:
               
462-684
               

               
Cow position:
               
chr25:17712488-17712269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
87, 64
               

               
Conread position:
               
464-782
               

               
Cow position:
               
chr25:20461077-20460753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
20, 67
               

               
Conread position:
               
465-709
               

               
Cow position:
               
chr25:17354327-17354089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
41, 66
               

               
Conread position:
               
466-646
               

               
Cow position:
               
chr25:2596133-2595954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
134, 63
               

               
Conread position:
               
485-707
               

               
Cow position:
               
chr25:18448768-18448553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
114, 42
               

               
Conread position:
               
485-709
               

               
Cow position:
               
chr25:24167973-24168189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
80, 54
               

               
Conread position:
               
485-713
               

               
Cow position:
               
chr25:18491003-18490778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
182, 42
               

               
Conread position:
               
485-713
               

               
Cow position:
               
chr25:27622017-27621788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
63, 53
               

               
Conread position:
               
492-720
               

               
Cow position:
               
chr25:448423-448646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
107, 37
               

               
Conread position:
               
495-680
               

               
Cow position:
               
chr25:40407552-40407730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
174, 47
               

               
Conread position:
               
581-786
               

               
Cow position:
               
chr25:12174658-12174880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
712-797
               

               
Cow position:
               
chr25:18072885-18072800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
86
               

               
Alignm identity:
               
75
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               
Show alignments to all cow chromosomes.