Cow genome map


           Conread name:
           LyN1-MLN01F050049
        

               Conread position:
               1-188
               

               Cow position:
               
               

               Alignm length:
               194
               

               Alignm identity:
               140
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               14, 131
               

               Conread position:
               1-191
               

               Cow position:
               
               

               Alignm length:
               191
               

               Alignm identity:
               150
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               1-386
               

               Cow position:
               
               

               Alignm length:
               403
               

               Alignm identity:
               290
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 152
               

               Conread position:
               1-457
               

               Cow position:
               
               

               Alignm length:
               474
               

               Alignm identity:
               353
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 151
               

               Conread position:
               1-562
               

               Cow position:
               
               

               Alignm length:
               580
               

               Alignm identity:
               399
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 145
               

               Conread position:
               1-567
               

               Cow position:
               
               

               Alignm length:
               570
               

               Alignm identity:
               383
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               105, 126
               

               Conread position:
               1-573
               

               Cow position:
               
               

               Alignm length:
               590
               

               Alignm identity:
               437
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 157
               

               Conread position:
               1-573
               

               Cow position:
               
               

               Alignm length:
               583
               

               Alignm identity:
               430
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 155
               

               Conread position:
               1-574
               

               Cow position:
               
               

               Alignm length:
               585
               

               Alignm identity:
               425
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               106, 154
               

               Conread position:
               1-579
               

               Cow position:
               
               

               Alignm length:
               593
               

               Alignm identity:
               412
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               105, 126
               

               Conread position:
               1-579
               

               Cow position:
               
               

               Alignm length:
               597
               

               Alignm identity:
               445
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 133
               

               Conread position:
               1-579
               

               Cow position:
               
               

               Alignm length:
               593
               

               Alignm identity:
               448
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               106, 153
               

               Conread position:
               1-579
               

               Cow position:
               
               

               Alignm length:
               591
               

               Alignm identity:
               411
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               106, 147
               

               Conread position:
               2-494
               

               Cow position:
               
               

               Alignm length:
               504
               

               Alignm identity:
               322
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               30, 126
               

               Conread position:
               2-559
               

               Cow position:
               
               

               Alignm length:
               570
               

               Alignm identity:
               380
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 12
               

               Conread position:
               2-562
               

               Cow position:
               
               

               Alignm length:
               586
               

               Alignm identity:
               386
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               105, 91
               

               Conread position:
               2-569
               

               Cow position:
               
               

               Alignm length:
               588
               

               Alignm identity:
               378
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               30, 66
               

               Conread position:
               2-573
               

               Cow position:
               
               

               Alignm length:
               584
               

               Alignm identity:
               423
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               105, 49
               

               Conread position:
               3-160
               

               Cow position:
               
               

               Alignm length:
               160
               

               Alignm identity:
               120
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               4-534
               

               Cow position:
               
               

               Alignm length:
               555
               

               Alignm identity:
               362
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               48, 127
               

               Conread position:
               5-579
               

               Cow position:
               
               

               Alignm length:
               590
               

               Alignm identity:
               413
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 21
               

               Conread position:
               5-606
               

               Cow position:
               
               

               Alignm length:
               618
               

               Alignm identity:
               452
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 161
               

               Conread position:
               6-579
               

               Cow position:
               
               

               Alignm length:
               589
               

               Alignm identity:
               433
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               6, 149
               

               Conread position:
               6-579
               

               Cow position:
               
               

               Alignm length:
               588
               

               Alignm identity:
               417
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               6, 50
               

               Conread position:
               7-184
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               139
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               99, 21
               

               Conread position:
               7-579
               

               Cow position:
               
               

               Alignm length:
               587
               

               Alignm identity:
               442
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               101, 20
               

               Conread position:
               7-579
               

               Cow position:
               
               

               Alignm length:
               583
               

               Alignm identity:
               426
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               101, 20
               

               Conread position:
               7-579
               

               Cow position:
               
               

               Alignm length:
               588
               

               Alignm identity:
               443
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               101, 20
               

               Conread position:
               11-583
               

               Cow position:
               
               

               Alignm length:
               590
               

               Alignm identity:
               394
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 76
               

               Conread position:
               17-235
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               90, 114
               

               Conread position:
               17-550
               

               Cow position:
               
               

               Alignm length:
               551
               

               Alignm identity:
               389
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               90, 137
               

               Conread position:
               17-553
               

               Cow position:
               
               

               Alignm length:
               542
               

               Alignm identity:
               351
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               92, 45
               

               Conread position:
               17-566
               

               Cow position:
               
               

               Alignm length:
               561
               

               Alignm identity:
               389
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               90, 131
               

               Conread position:
               17-568
               

               Cow position:
               
               

               Alignm length:
               566
               

               Alignm identity:
               412
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               90, 131
               

               Conread position:
               17-574
               

               Cow position:
               
               

               Alignm length:
               568
               

               Alignm identity:
               400
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               90, 131
               

               Conread position:
               17-579
               

               Cow position:
               
               

               Alignm length:
               573
               

               Alignm identity:
               405
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               90, 218
               

               Conread position:
               17-579
               

               Cow position:
               
               

               Alignm length:
               575
               

               Alignm identity:
               408
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               90, 100
               

               Conread position:
               17-579
               

               Cow position:
               
               

               Alignm length:
               579
               

               Alignm identity:
               421
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               90, 130
               

               Conread position:
               17-579
               

               Cow position:
               
               

               Alignm length:
               577
               

               Alignm identity:
               410
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               90, 131
               

               Conread position:
               17-579
               

               Cow position:
               
               

               Alignm length:
               574
               

               Alignm identity:
               412
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               90, 48
               

               Conread position:
               17-579
               

               Cow position:
               
               

               Alignm length:
               576
               

               Alignm identity:
               405
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               90, 117
               

               Conread position:
               17-579
               

               Cow position:
               
               

               Alignm length:
               578
               

               Alignm identity:
               413
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               90, 65
               

               Conread position:
               17-579
               

               Cow position:
               
               

               Alignm length:
               574
               

               Alignm identity:
               409
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               85, 75
               

               Conread position:
               18-517
               

               Cow position:
               
               

               Alignm length:
               509
               

               Alignm identity:
               376
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               89, 45
               

               Conread position:
               21-160
               

               Cow position:
               
               

               Alignm length:
               141
               

               Alignm identity:
               109
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               85, 127
               

               Conread position:
               21-235
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               85, 49
               

               Conread position:
               21-415
               

               Cow position:
               
               

               Alignm length:
               403
               

               Alignm identity:
               288
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               86, 133
               

               Conread position:
               21-491
               

               Cow position:
               
               

               Alignm length:
               485
               

               Alignm identity:
               365
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               86, 133
               

               Conread position:
               21-569
               

               Cow position:
               
               

               Alignm length:
               575
               

               Alignm identity:
               429
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               86, 133
               

               Conread position:
               21-573
               

               Cow position:
               
               

               Alignm length:
               567
               

               Alignm identity:
               411
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               86, 133
               

               Conread position:
               21-579
               

               Cow position:
               
               

               Alignm length:
               574
               

               Alignm identity:
               432
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               86, 134
               

               Conread position:
               21-579
               

               Cow position:
               
               

               Alignm length:
               570
               

               Alignm identity:
               422
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               86, 133
               

               Conread position:
               22-579
               

               Cow position:
               
               

               Alignm length:
               572
               

               Alignm identity:
               420
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               85, 146
               

               Conread position:
               22-579
               

               Cow position:
               
               

               Alignm length:
               568
               

               Alignm identity:
               418
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               85, 133
               

               Conread position:
               23-574
               

               Cow position:
               
               

               Alignm length:
               564
               

               Alignm identity:
               422
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               85, 125
               

               Conread position:
               23-574
               

               Cow position:
               
               

               Alignm length:
               565
               

               Alignm identity:
               397
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               5, 122
               

               Conread position:
               23-606
               

               Cow position:
               
               

               Alignm length:
               606
               

               Alignm identity:
               458
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               84, 426
               

               Conread position:
               27-579
               

               Cow position:
               
               

               Alignm length:
               568
               

               Alignm identity:
               398
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 123
               

               Conread position:
               27-579
               

               Cow position:
               
               

               Alignm length:
               572
               

               Alignm identity:
               424
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               80, 122
               

               Conread position:
               27-579
               

               Cow position:
               
               

               Alignm length:
               567
               

               Alignm identity:
               403
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               80, 100
               

               Conread position:
               28-567
               

               Cow position:
               
               

               Alignm length:
               548
               

               Alignm identity:
               377
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               79, 13
               

               Conread position:
               31-574
               

               Cow position:
               
               

               Alignm length:
               562
               

               Alignm identity:
               370
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               76, 40
               

               Conread position:
               32-574
               

               Cow position:
               
               

               Alignm length:
               566
               

               Alignm identity:
               399
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               75, 84
               

               Conread position:
               34-354
               

               Cow position:
               
               

               Alignm length:
               335
               

               Alignm identity:
               236
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 0
               

               Conread position:
               36-563
               

               Cow position:
               
               

               Alignm length:
               530
               

               Alignm identity:
               357
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 35
               

               Conread position:
               36-579
               

               Cow position:
               
               

               Alignm length:
               557
               

               Alignm identity:
               419
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 44
               

               Conread position:
               50-359
               

               Cow position:
               
               

               Alignm length:
               320
               

               Alignm identity:
               242
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               186, 12
               

               Conread position:
               50-416
               

               Cow position:
               
               

               Alignm length:
               377
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 56
               

               Conread position:
               63-579
               

               Cow position:
               
               

               Alignm length:
               529
               

               Alignm identity:
               381
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 54
               

               Conread position:
               73-353
               

               Cow position:
               
               

               Alignm length:
               283
               

               Alignm identity:
               195
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               161, 29
               

               Conread position:
               73-564
               

               Cow position:
               
               

               Alignm length:
               506
               

               Alignm identity:
               318
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 54
               

               Conread position:
               106-568
               

               Cow position:
               
               

               Alignm length:
               464
               

               Alignm identity:
               310
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               163, 23
               

               Conread position:
               150-579
               

               Cow position:
               
               

               Alignm length:
               437
               

               Alignm identity:
               305
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               97, 25
               

               Conread position:
               169-579
               

               Cow position:
               
               

               Alignm length:
               427
               

               Alignm identity:
               294
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               66, 206
               

               Conread position:
               195-562
               

               Cow position:
               
               

               Alignm length:
               384
               

               Alignm identity:
               245
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               42, 72
               

               Conread position:
               206-539
               

               Cow position:
               
               

               Alignm length:
               340
               

               Alignm identity:
               217
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               88, 142
               

               Conread position:
               219-443
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               173
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               223-550
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               220
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               9, 20
               

               Conread position:
               232-517
               

               Cow position:
               
               

               Alignm length:
               298
               

               Alignm identity:
               219
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               10, 178
               

               Conread position:
               243-573
               

               Cow position:
               
               

               Alignm length:
               333
               

               Alignm identity:
               227
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               26, 69
               

               Conread position:
               244-563
               

               Cow position:
               
               

               Alignm length:
               327
               

               Alignm identity:
               236
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 181
               

               Conread position:
               256-566
               

               Cow position:
               
               

               Alignm length:
               320
               

               Alignm identity:
               241
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 234
               

               Conread position:
               268-550
               

               Cow position:
               
               

               Alignm length:
               286
               

               Alignm identity:
               199
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               29, 8
               

               Conread position:
               268-567
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               209
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               35, 95
               

               Conread position:
               276-579
               

               Cow position:
               
               

               Alignm length:
               313
               

               Alignm identity:
               237
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 214
               

               Conread position:
               282-579
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               225
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 192
               

               Conread position:
               312-573
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               209
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 171
               

               Conread position:
               341-582
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               176
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               184, 41
               

               Conread position:
               345-568
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               165
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               86, 0
               

               Conread position:
               345-579
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               181
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               191, 136
               

               Conread position:
               368-574
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               162
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               107, 83
               

               Conread position:
               371-498
               

               Cow position:
               
               

               Alignm length:
               128
               

               Alignm identity:
               102
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               110, 0
               

               Conread position:
               378-579
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               145
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               83, 12
               

               Conread position:
               396-569
               

               Cow position:
               
               

               Alignm length:
               181
               

               Alignm identity:
               138
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               55, 85
               

               Conread position:
               398-579
               

               Cow position:
               
               

               Alignm length:
               183
               

               Alignm identity:
               129
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               29, 20
               

               Conread position:
               401-579
               

               Cow position:
               
               

               Alignm length:
               180
               

               Alignm identity:
               138
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               157, 80
               

               Conread position:
               402-568
               

               Cow position:
               
               

               Alignm length:
               168
               

               Alignm identity:
               129
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               10, 78
               

               Conread position:
               463-586
               

               Cow position:
               
               

               Alignm length:
               124
               

               Alignm identity:
               97
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               44, 0
               
Show alignments to all cow chromosomes.