Cow genome map
| Conread name: | LyN1-MLN01F050049 |
| Conread position: | 1-407 |
| Cow position: | chr12:22026303-22026718 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 268 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 9, 138 |
| Conread position: | 1-568 |
| Cow position: | chr12:20998575-20998007 (view UCSC Genome Browser custom track) |
| Alignm length: | 585 |
| Alignm identity: | 410 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 72 |
| Conread position: | 1-569 |
| Cow position: | chr12:27933398-27932819 (view UCSC Genome Browser custom track) |
| Alignm length: | 583 |
| Alignm identity: | 430 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 106, 153 |
| Conread position: | 1-579 |
| Cow position: | chr12:8678575-8677986 (view UCSC Genome Browser custom track) |
| Alignm length: | 594 |
| Alignm identity: | 441 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 157 |
| Conread position: | 1-579 |
| Cow position: | chr12:22206197-22205611 (view UCSC Genome Browser custom track) |
| Alignm length: | 591 |
| Alignm identity: | 426 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 106, 153 |
| Conread position: | 2-566 |
| Cow position: | chr12:21499669-21500232 (view UCSC Genome Browser custom track) |
| Alignm length: | 586 |
| Alignm identity: | 385 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 133 |
| Conread position: | 7-248 |
| Cow position: | chr12:26947710-26947459 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 185 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 100, 20 |
| Conread position: | 9-452 |
| Cow position: | chr12:1868024-1868471 (view UCSC Genome Browser custom track) |
| Alignm length: | 455 |
| Alignm identity: | 292 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 98, 32 |
| Conread position: | 16-568 |
| Cow position: | chr12:15951690-15951139 (view UCSC Genome Browser custom track) |
| Alignm length: | 564 |
| Alignm identity: | 416 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 91, 132 |
| Conread position: | 16-579 |
| Cow position: | chr12:21941342-21941901 (view UCSC Genome Browser custom track) |
| Alignm length: | 581 |
| Alignm identity: | 414 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 127 |
| Conread position: | 17-566 |
| Cow position: | chr12:21255085-21254533 (view UCSC Genome Browser custom track) |
| Alignm length: | 564 |
| Alignm identity: | 401 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 65 |
| Conread position: | 17-571 |
| Cow position: | chr12:32653111-32653672 (view UCSC Genome Browser custom track) |
| Alignm length: | 566 |
| Alignm identity: | 417 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 91, 114 |
| Conread position: | 17-573 |
| Cow position: | chr12:37558123-37558686 (view UCSC Genome Browser custom track) |
| Alignm length: | 568 |
| Alignm identity: | 413 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 131 |
| Conread position: | 17-579 |
| Cow position: | chr12:3360477-3361040 (view UCSC Genome Browser custom track) |
| Alignm length: | 574 |
| Alignm identity: | 399 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 131 |
| Conread position: | 17-579 |
| Cow position: | chr12:21207261-21207830 (view UCSC Genome Browser custom track) |
| Alignm length: | 575 |
| Alignm identity: | 403 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 131 |
| Conread position: | 17-579 |
| Cow position: | chr12:21426267-21426830 (view UCSC Genome Browser custom track) |
| Alignm length: | 574 |
| Alignm identity: | 418 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 113 |
| Conread position: | 17-579 |
| Cow position: | chr12:26141377-26141950 (view UCSC Genome Browser custom track) |
| Alignm length: | 577 |
| Alignm identity: | 414 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 114 |
| Conread position: | 17-579 |
| Cow position: | chr12:43031809-43031248 (view UCSC Genome Browser custom track) |
| Alignm length: | 576 |
| Alignm identity: | 400 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 44 |
| Conread position: | 18-585 |
| Cow position: | chr12:2282112-2282688 (view UCSC Genome Browser custom track) |
| Alignm length: | 584 |
| Alignm identity: | 417 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 90 |
| Conread position: | 21-386 |
| Cow position: | chr12:21197400-21197772 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 85, 134 |
| Conread position: | 21-566 |
| Cow position: | chr12:1402061-1402615 (view UCSC Genome Browser custom track) |
| Alignm length: | 558 |
| Alignm identity: | 405 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 86, 133 |
| Conread position: | 21-573 |
| Cow position: | chr12:6407074-6406518 (view UCSC Genome Browser custom track) |
| Alignm length: | 566 |
| Alignm identity: | 421 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 86, 35 |
| Conread position: | 21-573 |
| Cow position: | chr12:11097809-11098372 (view UCSC Genome Browser custom track) |
| Alignm length: | 567 |
| Alignm identity: | 426 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 86, 133 |
| Conread position: | 21-574 |
| Cow position: | chr12:21901521-21902070 (view UCSC Genome Browser custom track) |
| Alignm length: | 565 |
| Alignm identity: | 421 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 130 |
| Conread position: | 21-574 |
| Cow position: | chr12:25101496-25100930 (view UCSC Genome Browser custom track) |
| Alignm length: | 570 |
| Alignm identity: | 411 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 85, 98 |
| Conread position: | 21-574 |
| Cow position: | chr12:42860247-42859696 (view UCSC Genome Browser custom track) |
| Alignm length: | 565 |
| Alignm identity: | 420 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 85, 128 |
| Conread position: | 21-579 |
| Cow position: | chr12:252489-251921 (view UCSC Genome Browser custom track) |
| Alignm length: | 573 |
| Alignm identity: | 411 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 86, 72 |
| Conread position: | 23-574 |
| Cow position: | chr12:8310754-8311312 (view UCSC Genome Browser custom track) |
| Alignm length: | 567 |
| Alignm identity: | 418 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 125 |
| Conread position: | 23-579 |
| Cow position: | chr12:2368-2935 (view UCSC Genome Browser custom track) |
| Alignm length: | 571 |
| Alignm identity: | 433 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 85, 125 |
| Conread position: | 24-563 |
| Cow position: | chr12:1137166-1137704 (view UCSC Genome Browser custom track) |
| Alignm length: | 552 |
| Alignm identity: | 362 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 106 |
| Conread position: | 27-306 |
| Cow position: | chr12:2840011-2839737 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 198 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 242, 19 |
| Conread position: | 30-579 |
| Cow position: | chr12:22332196-22332760 (view UCSC Genome Browser custom track) |
| Alignm length: | 572 |
| Alignm identity: | 410 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 65 |
| Conread position: | 40-427 |
| Cow position: | chr12:48404637-48405029 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 103 |
| Conread position: | 41-579 |
| Cow position: | chr12:14663022-14662497 (view UCSC Genome Browser custom track) |
| Alignm length: | 545 |
| Alignm identity: | 381 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 112 |
| Conread position: | 68-569 |
| Cow position: | chr12:28766401-28765893 (view UCSC Genome Browser custom track) |
| Alignm length: | 513 |
| Alignm identity: | 373 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 111 |
| Conread position: | 79-235 |
| Cow position: | chr12:42420784-42420628 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 29, 69 |
| Conread position: | 137-579 |
| Cow position: | chr12:45261291-45261759 (view UCSC Genome Browser custom track) |
| Alignm length: | 475 |
| Alignm identity: | 350 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 10 |
| Conread position: | 186-579 |
| Cow position: | chr12:8982680-8982288 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 274 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 85, 224 |
| Conread position: | 223-579 |
| Cow position: | chr12:21227679-21227315 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 240 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 19, 50 |
| Conread position: | 232-579 |
| Cow position: | chr12:26947198-26946856 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 252 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 37, 172 |
| Conread position: | 276-579 |
| Cow position: | chr12:3632427-3632129 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 209 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 37, 136 |
| Conread position: | 392-579 |
| Cow position: | chr12:2838903-2838718 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 34, 15 |
| Conread position: | 402-579 |
| Cow position: | chr12:48405232-48405408 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 117, 84 |
| Conread position: | 437-579 |
| Cow position: | chr12:33986158-33986298 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 108 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 49, 0 |
Show alignments to all cow chromosomes.