Cow genome map


           Conread name:
           LyN1-MLN01F050049
        

               Conread position:
               1-328
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               216
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 157
               

               Conread position:
               1-573
               

               Cow position:
               
               

               Alignm length:
               595
               

               Alignm identity:
               441
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               106, 502
               

               Conread position:
               1-579
               

               Cow position:
               
               

               Alignm length:
               594
               

               Alignm identity:
               434
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               106, 59
               

               Conread position:
               1-579
               

               Cow position:
               
               

               Alignm length:
               588
               

               Alignm identity:
               434
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               105, 27
               

               Conread position:
               1-579
               

               Cow position:
               
               

               Alignm length:
               592
               

               Alignm identity:
               436
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 28
               

               Conread position:
               2-392
               

               Cow position:
               
               

               Alignm length:
               399
               

               Alignm identity:
               292
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               104, 15
               

               Conread position:
               2-408
               

               Cow position:
               
               

               Alignm length:
               423
               

               Alignm identity:
               275
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               10, 150
               

               Conread position:
               3-579
               

               Cow position:
               
               

               Alignm length:
               593
               

               Alignm identity:
               430
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 152
               

               Conread position:
               4-567
               

               Cow position:
               
               

               Alignm length:
               577
               

               Alignm identity:
               432
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 22
               

               Conread position:
               6-440
               

               Cow position:
               
               

               Alignm length:
               454
               

               Alignm identity:
               322
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               84, 127
               

               Conread position:
               6-574
               

               Cow position:
               
               

               Alignm length:
               576
               

               Alignm identity:
               433
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               265, 11
               

               Conread position:
               6-577
               

               Cow position:
               
               

               Alignm length:
               586
               

               Alignm identity:
               429
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               101, 140
               

               Conread position:
               6-579
               

               Cow position:
               
               

               Alignm length:
               604
               

               Alignm identity:
               439
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 141
               

               Conread position:
               7-352
               

               Cow position:
               
               

               Alignm length:
               356
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 21
               

               Conread position:
               7-498
               

               Cow position:
               
               

               Alignm length:
               506
               

               Alignm identity:
               358
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               101, 20
               

               Conread position:
               7-574
               

               Cow position:
               
               

               Alignm length:
               576
               

               Alignm identity:
               412
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               100, 20
               

               Conread position:
               7-579
               

               Cow position:
               
               

               Alignm length:
               587
               

               Alignm identity:
               440
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               101, 21
               

               Conread position:
               8-573
               

               Cow position:
               
               

               Alignm length:
               587
               

               Alignm identity:
               429
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               101, 19
               

               Conread position:
               10-540
               

               Cow position:
               
               

               Alignm length:
               540
               

               Alignm identity:
               374
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               97, 102
               

               Conread position:
               16-186
               

               Cow position:
               
               

               Alignm length:
               172
               

               Alignm identity:
               123
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               91, 132
               

               Conread position:
               16-579
               

               Cow position:
               
               

               Alignm length:
               578
               

               Alignm identity:
               437
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               91, 138
               

               Conread position:
               16-579
               

               Cow position:
               
               

               Alignm length:
               578
               

               Alignm identity:
               401
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               91, 111
               

               Conread position:
               17-235
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               90, 114
               

               Conread position:
               17-343
               

               Cow position:
               
               

               Alignm length:
               331
               

               Alignm identity:
               199
               

               Alignm E-value:
               8e-36
               

               Alignm gaps (pig, cow):
               87, 114
               

               Conread position:
               17-496
               

               Cow position:
               
               

               Alignm length:
               497
               

               Alignm identity:
               370
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               87, 127
               

               Conread position:
               17-566
               

               Cow position:
               
               

               Alignm length:
               564
               

               Alignm identity:
               398
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               90, 30
               

               Conread position:
               17-574
               

               Cow position:
               
               

               Alignm length:
               567
               

               Alignm identity:
               401
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               90, 36
               

               Conread position:
               17-579
               

               Cow position:
               
               

               Alignm length:
               571
               

               Alignm identity:
               404
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 230
               

               Conread position:
               17-579
               

               Cow position:
               
               

               Alignm length:
               574
               

               Alignm identity:
               407
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               90, 138
               

               Conread position:
               17-579
               

               Cow position:
               
               

               Alignm length:
               577
               

               Alignm identity:
               420
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               90, 478
               

               Conread position:
               17-579
               

               Cow position:
               
               

               Alignm length:
               577
               

               Alignm identity:
               411
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               90, 131
               

               Conread position:
               18-579
               

               Cow position:
               
               

               Alignm length:
               573
               

               Alignm identity:
               406
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               89, 125
               

               Conread position:
               18-579
               

               Cow position:
               
               

               Alignm length:
               585
               

               Alignm identity:
               386
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               88, 79
               

               Conread position:
               21-465
               

               Cow position:
               
               

               Alignm length:
               454
               

               Alignm identity:
               325
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               86, 133
               

               Conread position:
               21-537
               

               Cow position:
               
               

               Alignm length:
               532
               

               Alignm identity:
               385
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               88, 133
               

               Conread position:
               21-545
               

               Cow position:
               
               

               Alignm length:
               536
               

               Alignm identity:
               397
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               86, 133
               

               Conread position:
               21-573
               

               Cow position:
               
               

               Alignm length:
               569
               

               Alignm identity:
               420
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 43
               

               Conread position:
               21-574
               

               Cow position:
               
               

               Alignm length:
               563
               

               Alignm identity:
               363
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               88, 50
               

               Conread position:
               21-579
               

               Cow position:
               
               

               Alignm length:
               574
               

               Alignm identity:
               422
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               86, 133
               

               Conread position:
               21-579
               

               Cow position:
               
               

               Alignm length:
               571
               

               Alignm identity:
               420
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               86, 133
               

               Conread position:
               21-579
               

               Cow position:
               
               

               Alignm length:
               570
               

               Alignm identity:
               428
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               208, 80
               

               Conread position:
               23-574
               

               Cow position:
               
               

               Alignm length:
               565
               

               Alignm identity:
               418
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               214, 26
               

               Conread position:
               23-579
               

               Cow position:
               
               

               Alignm length:
               565
               

               Alignm identity:
               425
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               85, 125
               

               Conread position:
               23-586
               

               Cow position:
               
               

               Alignm length:
               578
               

               Alignm identity:
               431
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               87, 386
               

               Conread position:
               27-561
               

               Cow position:
               
               

               Alignm length:
               540
               

               Alignm identity:
               346
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               279, 80
               

               Conread position:
               27-573
               

               Cow position:
               
               

               Alignm length:
               561
               

               Alignm identity:
               417
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               80, 71
               

               Conread position:
               27-579
               

               Cow position:
               
               

               Alignm length:
               566
               

               Alignm identity:
               409
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               80, 50
               

               Conread position:
               30-568
               

               Cow position:
               
               

               Alignm length:
               550
               

               Alignm identity:
               402
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               77, 30
               

               Conread position:
               30-579
               

               Cow position:
               
               

               Alignm length:
               562
               

               Alignm identity:
               416
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               77, 97
               

               Conread position:
               33-568
               

               Cow position:
               
               

               Alignm length:
               544
               

               Alignm identity:
               349
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               6, 21
               

               Conread position:
               36-573
               

               Cow position:
               
               

               Alignm length:
               554
               

               Alignm identity:
               420
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 22
               

               Conread position:
               38-579
               

               Cow position:
               
               

               Alignm length:
               549
               

               Alignm identity:
               421
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               231, 109
               

               Conread position:
               47-373
               

               Cow position:
               
               

               Alignm length:
               341
               

               Alignm identity:
               237
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               60, 108
               

               Conread position:
               64-202
               

               Cow position:
               
               

               Alignm length:
               139
               

               Alignm identity:
               112
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               82-579
               

               Cow position:
               
               

               Alignm length:
               513
               

               Alignm identity:
               397
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 66
               

               Conread position:
               131-580
               

               Cow position:
               
               

               Alignm length:
               465
               

               Alignm identity:
               308
               

               Alignm E-value:
               9e-38
               

               Alignm gaps (pig, cow):
               77, 23
               

               Conread position:
               150-484
               

               Cow position:
               
               

               Alignm length:
               349
               

               Alignm identity:
               224
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               114, 231
               

               Conread position:
               179-580
               

               Cow position:
               
               

               Alignm length:
               409
               

               Alignm identity:
               286
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 68
               

               Conread position:
               197-495
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               198
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               100, 57
               

               Conread position:
               219-573
               

               Cow position:
               
               

               Alignm length:
               369
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 276
               

               Conread position:
               224-574
               

               Cow position:
               
               

               Alignm length:
               360
               

               Alignm identity:
               271
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 238
               

               Conread position:
               224-579
               

               Cow position:
               
               

               Alignm length:
               369
               

               Alignm identity:
               276
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 270
               

               Conread position:
               301-579
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               212
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               228, 11
               

               Conread position:
               312-566
               

               Cow position:
               
               

               Alignm length:
               257
               

               Alignm identity:
               184
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               21, 45
               

               Conread position:
               328-566
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               174
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               29, 136
               

               Conread position:
               369-568
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               69, 114
               

               Conread position:
               369-574
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               162
               

               Alignm E-value:
               6.02558e-44
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               413-579
               

               Cow position:
               
               

               Alignm length:
               167
               

               Alignm identity:
               126
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               73, 0
               

               Conread position:
               433-579
               

               Cow position:
               
               

               Alignm length:
               147
               

               Alignm identity:
               113
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               52, 0
               
Show alignments to all cow chromosomes.