Cow genome map


           Conread name:
           LyN1-MLN01F050049
        

               Conread position:
               1-534
               

               Cow position:
               
               

               Alignm length:
               549
               

               Alignm identity:
               410
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 157
               

               Conread position:
               1-568
               

               Cow position:
               
               

               Alignm length:
               581
               

               Alignm identity:
               433
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               106, 40
               

               Conread position:
               1-568
               

               Cow position:
               
               

               Alignm length:
               580
               

               Alignm identity:
               442
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 20
               

               Conread position:
               1-571
               

               Cow position:
               
               

               Alignm length:
               587
               

               Alignm identity:
               432
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 152
               

               Conread position:
               1-573
               

               Cow position:
               
               

               Alignm length:
               592
               

               Alignm identity:
               438
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 499
               

               Conread position:
               1-573
               

               Cow position:
               
               

               Alignm length:
               592
               

               Alignm identity:
               436
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 499
               

               Conread position:
               1-574
               

               Cow position:
               
               

               Alignm length:
               589
               

               Alignm identity:
               435
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 83
               

               Conread position:
               1-574
               

               Cow position:
               
               

               Alignm length:
               586
               

               Alignm identity:
               398
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 85
               

               Conread position:
               1-579
               

               Cow position:
               
               

               Alignm length:
               593
               

               Alignm identity:
               446
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               106, 153
               

               Conread position:
               1-579
               

               Cow position:
               
               

               Alignm length:
               587
               

               Alignm identity:
               411
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 113
               

               Conread position:
               2-454
               

               Cow position:
               
               

               Alignm length:
               463
               

               Alignm identity:
               301
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               38, 24
               

               Conread position:
               2-568
               

               Cow position:
               
               

               Alignm length:
               580
               

               Alignm identity:
               408
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               105, 44
               

               Conread position:
               2-573
               

               Cow position:
               
               

               Alignm length:
               582
               

               Alignm identity:
               427
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               105, 152
               

               Conread position:
               2-574
               

               Cow position:
               
               

               Alignm length:
               589
               

               Alignm identity:
               391
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 148
               

               Conread position:
               3-567
               

               Cow position:
               
               

               Alignm length:
               580
               

               Alignm identity:
               426
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 153
               

               Conread position:
               3-579
               

               Cow position:
               
               

               Alignm length:
               592
               

               Alignm identity:
               431
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 110
               

               Conread position:
               4-542
               

               Cow position:
               
               

               Alignm length:
               563
               

               Alignm identity:
               400
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 91
               

               Conread position:
               6-250
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               6-250
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               177
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               37, 102
               

               Conread position:
               6-308
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               229
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               6, 58
               

               Conread position:
               6-361
               

               Cow position:
               
               

               Alignm length:
               364
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               6, 144
               

               Conread position:
               6-579
               

               Cow position:
               
               

               Alignm length:
               590
               

               Alignm identity:
               441
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               6, 14
               

               Conread position:
               6-579
               

               Cow position:
               
               

               Alignm length:
               589
               

               Alignm identity:
               437
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               101, 149
               

               Conread position:
               7-510
               

               Cow position:
               
               

               Alignm length:
               518
               

               Alignm identity:
               390
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               101, 20
               

               Conread position:
               9-360
               

               Cow position:
               
               

               Alignm length:
               364
               

               Alignm identity:
               270
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               99, 18
               

               Conread position:
               9-414
               

               Cow position:
               
               

               Alignm length:
               421
               

               Alignm identity:
               298
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               97, 53
               

               Conread position:
               10-579
               

               Cow position:
               
               

               Alignm length:
               576
               

               Alignm identity:
               407
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               102, 17
               

               Conread position:
               11-419
               

               Cow position:
               
               

               Alignm length:
               425
               

               Alignm identity:
               303
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               96, 36
               

               Conread position:
               12-574
               

               Cow position:
               
               

               Alignm length:
               577
               

               Alignm identity:
               428
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 121
               

               Conread position:
               17-538
               

               Cow position:
               
               

               Alignm length:
               536
               

               Alignm identity:
               389
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               90, 131
               

               Conread position:
               17-538
               

               Cow position:
               
               

               Alignm length:
               536
               

               Alignm identity:
               385
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               90, 131
               

               Conread position:
               17-543
               

               Cow position:
               
               

               Alignm length:
               540
               

               Alignm identity:
               352
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               232, 81
               

               Conread position:
               17-579
               

               Cow position:
               
               

               Alignm length:
               576
               

               Alignm identity:
               400
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               90, 112
               

               Conread position:
               17-579
               

               Cow position:
               
               

               Alignm length:
               577
               

               Alignm identity:
               411
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               90, 110
               

               Conread position:
               17-579
               

               Cow position:
               
               

               Alignm length:
               580
               

               Alignm identity:
               411
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 133
               

               Conread position:
               17-579
               

               Cow position:
               
               

               Alignm length:
               575
               

               Alignm identity:
               414
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               90, 48
               

               Conread position:
               20-209
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               150
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               87, 0
               

               Conread position:
               20-574
               

               Cow position:
               
               

               Alignm length:
               571
               

               Alignm identity:
               432
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 130
               

               Conread position:
               21-210
               

               Cow position:
               
               

               Alignm length:
               191
               

               Alignm identity:
               147
               

               Alignm E-value:
               9e-38
               

               Alignm gaps (pig, cow):
               85, 128
               

               Conread position:
               21-355
               

               Cow position:
               
               

               Alignm length:
               345
               

               Alignm identity:
               252
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 129
               

               Conread position:
               21-540
               

               Cow position:
               
               

               Alignm length:
               531
               

               Alignm identity:
               330
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               86, 110
               

               Conread position:
               21-543
               

               Cow position:
               
               

               Alignm length:
               549
               

               Alignm identity:
               402
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               85, 128
               

               Conread position:
               21-549
               

               Cow position:
               
               

               Alignm length:
               543
               

               Alignm identity:
               397
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               89, 133
               

               Conread position:
               21-573
               

               Cow position:
               
               

               Alignm length:
               569
               

               Alignm identity:
               421
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               86, 133
               

               Conread position:
               21-573
               

               Cow position:
               
               

               Alignm length:
               563
               

               Alignm identity:
               420
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               86, 133
               

               Conread position:
               21-579
               

               Cow position:
               
               

               Alignm length:
               572
               

               Alignm identity:
               421
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               86, 133
               

               Conread position:
               21-579
               

               Cow position:
               
               

               Alignm length:
               562
               

               Alignm identity:
               419
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               86, 133
               

               Conread position:
               21-579
               

               Cow position:
               
               

               Alignm length:
               571
               

               Alignm identity:
               424
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               86, 59
               

               Conread position:
               21-579
               

               Cow position:
               
               

               Alignm length:
               572
               

               Alignm identity:
               417
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               230, 86
               

               Conread position:
               21-579
               

               Cow position:
               
               

               Alignm length:
               573
               

               Alignm identity:
               424
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               85, 128
               

               Conread position:
               23-573
               

               Cow position:
               
               

               Alignm length:
               563
               

               Alignm identity:
               433
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               85, 125
               

               Conread position:
               27-453
               

               Cow position:
               
               

               Alignm length:
               437
               

               Alignm identity:
               317
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               81, 127
               

               Conread position:
               28-467
               

               Cow position:
               
               

               Alignm length:
               453
               

               Alignm identity:
               291
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               65, 23
               

               Conread position:
               28-561
               

               Cow position:
               
               

               Alignm length:
               540
               

               Alignm identity:
               366
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               79, 101
               

               Conread position:
               28-568
               

               Cow position:
               
               

               Alignm length:
               560
               

               Alignm identity:
               353
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               71, 57
               

               Conread position:
               30-580
               

               Cow position:
               
               

               Alignm length:
               559
               

               Alignm identity:
               417
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               77, 117
               

               Conread position:
               31-311
               

               Cow position:
               
               

               Alignm length:
               283
               

               Alignm identity:
               203
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               76, 59
               

               Conread position:
               31-536
               

               Cow position:
               
               

               Alignm length:
               520
               

               Alignm identity:
               347
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               75, 59
               

               Conread position:
               32-574
               

               Cow position:
               
               

               Alignm length:
               559
               

               Alignm identity:
               424
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               75, 9
               

               Conread position:
               32-579
               

               Cow position:
               
               

               Alignm length:
               559
               

               Alignm identity:
               411
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               75, 122
               

               Conread position:
               34-579
               

               Cow position:
               
               

               Alignm length:
               559
               

               Alignm identity:
               389
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 114
               

               Conread position:
               38-557
               

               Cow position:
               
               

               Alignm length:
               540
               

               Alignm identity:
               398
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               70, 112
               

               Conread position:
               39-568
               

               Cow position:
               
               

               Alignm length:
               544
               

               Alignm identity:
               383
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 73
               

               Conread position:
               41-579
               

               Cow position:
               
               

               Alignm length:
               550
               

               Alignm identity:
               422
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 114
               

               Conread position:
               50-574
               

               Cow position:
               
               

               Alignm length:
               539
               

               Alignm identity:
               407
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 104
               

               Conread position:
               51-495
               

               Cow position:
               
               

               Alignm length:
               455
               

               Alignm identity:
               311
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 63
               

               Conread position:
               52-579
               

               Cow position:
               
               

               Alignm length:
               543
               

               Alignm identity:
               401
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 102
               

               Conread position:
               135-579
               

               Cow position:
               
               

               Alignm length:
               451
               

               Alignm identity:
               288
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               17, 86
               

               Conread position:
               137-573
               

               Cow position:
               
               

               Alignm length:
               450
               

               Alignm identity:
               342
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               110, 16
               

               Conread position:
               140-579
               

               Cow position:
               
               

               Alignm length:
               443
               

               Alignm identity:
               324
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               129, 6
               

               Conread position:
               147-526
               

               Cow position:
               
               

               Alignm length:
               400
               

               Alignm identity:
               257
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               66, 285
               

               Conread position:
               148-567
               

               Cow position:
               
               

               Alignm length:
               433
               

               Alignm identity:
               313
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 243
               

               Conread position:
               159-536
               

               Cow position:
               
               

               Alignm length:
               388
               

               Alignm identity:
               260
               

               Alignm E-value:
               9e-38
               

               Alignm gaps (pig, cow):
               48, 34
               

               Conread position:
               178-568
               

               Cow position:
               
               

               Alignm length:
               401
               

               Alignm identity:
               290
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               86, 167
               

               Conread position:
               179-573
               

               Cow position:
               
               

               Alignm length:
               408
               

               Alignm identity:
               294
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               76, 315
               

               Conread position:
               185-563
               

               Cow position:
               
               

               Alignm length:
               390
               

               Alignm identity:
               298
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 166
               

               Conread position:
               199-586
               

               Cow position:
               
               

               Alignm length:
               397
               

               Alignm identity:
               290
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               70, 192
               

               Conread position:
               222-573
               

               Cow position:
               
               

               Alignm length:
               359
               

               Alignm identity:
               256
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 12
               

               Conread position:
               223-579
               

               Cow position:
               
               

               Alignm length:
               368
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 189
               

               Conread position:
               232-579
               

               Cow position:
               
               

               Alignm length:
               358
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 151
               

               Conread position:
               235-579
               

               Cow position:
               
               

               Alignm length:
               354
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 12
               

               Conread position:
               240-533
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               202
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               31, 184
               

               Conread position:
               243-568
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               225
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               26, 109
               

               Conread position:
               255-574
               

               Cow position:
               
               

               Alignm length:
               329
               

               Alignm identity:
               248
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 235
               

               Conread position:
               312-573
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               179
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               21, 96
               

               Conread position:
               326-550
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               156
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               104, 0
               

               Conread position:
               368-571
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               14, 90
               

               Conread position:
               368-573
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               113, 0
               

               Conread position:
               371-579
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               120
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               121, 115
               

               Conread position:
               377-579
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               156
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               104, 0
               

               Conread position:
               390-560
               

               Cow position:
               
               

               Alignm length:
               174
               

               Alignm identity:
               125
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               27, 100
               

               Conread position:
               430-579
               

               Cow position:
               
               

               Alignm length:
               150
               

               Alignm identity:
               114
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               30, 0
               
Show alignments to all cow chromosomes.