Cow genome map


           Conread name:
           LyN1-MLN01F050049
        

               Conread position:
               1-452
               

               Cow position:
               
               

               Alignm length:
               465
               

               Alignm identity:
               330
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 112
               

               Conread position:
               1-535
               

               Cow position:
               
               

               Alignm length:
               542
               

               Alignm identity:
               411
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 152
               

               Conread position:
               1-573
               

               Cow position:
               
               

               Alignm length:
               594
               

               Alignm identity:
               389
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 295
               

               Conread position:
               1-579
               

               Cow position:
               
               

               Alignm length:
               595
               

               Alignm identity:
               414
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 288
               

               Conread position:
               1-579
               

               Cow position:
               
               

               Alignm length:
               593
               

               Alignm identity:
               430
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               106, 147
               

               Conread position:
               2-248
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               177
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               103, 147
               

               Conread position:
               4-187
               

               Cow position:
               
               

               Alignm length:
               187
               

               Alignm identity:
               142
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               19, 44
               

               Conread position:
               4-579
               

               Cow position:
               
               

               Alignm length:
               590
               

               Alignm identity:
               428
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 33
               

               Conread position:
               5-579
               

               Cow position:
               
               

               Alignm length:
               589
               

               Alignm identity:
               424
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               102, 125
               

               Conread position:
               6-530
               

               Cow position:
               
               

               Alignm length:
               541
               

               Alignm identity:
               385
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 90
               

               Conread position:
               6-566
               

               Cow position:
               
               

               Alignm length:
               573
               

               Alignm identity:
               429
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               101, 142
               

               Conread position:
               7-248
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               177
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               100, 20
               

               Conread position:
               7-496
               

               Cow position:
               
               

               Alignm length:
               495
               

               Alignm identity:
               362
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               235, 20
               

               Conread position:
               16-245
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               149
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               92, 0
               

               Conread position:
               16-573
               

               Cow position:
               
               

               Alignm length:
               572
               

               Alignm identity:
               429
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               91, 115
               

               Conread position:
               17-210
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               141
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               90, 126
               

               Conread position:
               17-405
               

               Cow position:
               
               

               Alignm length:
               403
               

               Alignm identity:
               253
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               90, 131
               

               Conread position:
               17-568
               

               Cow position:
               
               

               Alignm length:
               562
               

               Alignm identity:
               405
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               90, 110
               

               Conread position:
               17-573
               

               Cow position:
               
               

               Alignm length:
               572
               

               Alignm identity:
               423
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               90, 131
               

               Conread position:
               17-573
               

               Cow position:
               
               

               Alignm length:
               572
               

               Alignm identity:
               413
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               90, 131
               

               Conread position:
               17-579
               

               Cow position:
               
               

               Alignm length:
               576
               

               Alignm identity:
               397
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               146, 109
               

               Conread position:
               17-579
               

               Cow position:
               
               

               Alignm length:
               574
               

               Alignm identity:
               415
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               85, 131
               

               Conread position:
               17-579
               

               Cow position:
               
               

               Alignm length:
               578
               

               Alignm identity:
               406
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               90, 110
               

               Conread position:
               17-579
               

               Cow position:
               
               

               Alignm length:
               575
               

               Alignm identity:
               413
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 132
               

               Conread position:
               17-579
               

               Cow position:
               
               

               Alignm length:
               573
               

               Alignm identity:
               411
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               90, 131
               

               Conread position:
               17-579
               

               Cow position:
               
               

               Alignm length:
               582
               

               Alignm identity:
               408
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               90, 63
               

               Conread position:
               17-579
               

               Cow position:
               
               

               Alignm length:
               577
               

               Alignm identity:
               416
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 131
               

               Conread position:
               17-579
               

               Cow position:
               
               

               Alignm length:
               577
               

               Alignm identity:
               407
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               90, 131
               

               Conread position:
               17-579
               

               Cow position:
               
               

               Alignm length:
               576
               

               Alignm identity:
               414
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               90, 114
               

               Conread position:
               20-456
               

               Cow position:
               
               

               Alignm length:
               451
               

               Alignm identity:
               320
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               87, 44
               

               Conread position:
               21-408
               

               Cow position:
               
               

               Alignm length:
               413
               

               Alignm identity:
               298
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 141
               

               Conread position:
               21-572
               

               Cow position:
               
               

               Alignm length:
               578
               

               Alignm identity:
               412
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               85, 492
               

               Conread position:
               21-573
               

               Cow position:
               
               

               Alignm length:
               573
               

               Alignm identity:
               411
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               86, 25
               

               Conread position:
               21-573
               

               Cow position:
               
               

               Alignm length:
               567
               

               Alignm identity:
               422
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               86, 133
               

               Conread position:
               21-574
               

               Cow position:
               
               

               Alignm length:
               568
               

               Alignm identity:
               424
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               86, 72
               

               Conread position:
               21-574
               

               Cow position:
               
               

               Alignm length:
               569
               

               Alignm identity:
               427
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               86, 133
               

               Conread position:
               23-247
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               167
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               85, 39
               

               Conread position:
               23-568
               

               Cow position:
               
               

               Alignm length:
               557
               

               Alignm identity:
               420
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               84, 24
               

               Conread position:
               23-568
               

               Cow position:
               
               

               Alignm length:
               559
               

               Alignm identity:
               386
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               84, 54
               

               Conread position:
               23-579
               

               Cow position:
               
               

               Alignm length:
               583
               

               Alignm identity:
               427
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               84, 125
               

               Conread position:
               23-579
               

               Cow position:
               
               

               Alignm length:
               572
               

               Alignm identity:
               419
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               85, 125
               

               Conread position:
               27-212
               

               Cow position:
               
               

               Alignm length:
               188
               

               Alignm identity:
               105
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               79, 121
               

               Conread position:
               27-279
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               200
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               80, 121
               

               Conread position:
               27-432
               

               Cow position:
               
               

               Alignm length:
               423
               

               Alignm identity:
               295
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               80, 154
               

               Conread position:
               27-579
               

               Cow position:
               
               

               Alignm length:
               583
               

               Alignm identity:
               397
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               80, 484
               

               Conread position:
               28-586
               

               Cow position:
               
               

               Alignm length:
               581
               

               Alignm identity:
               394
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               76, 42
               

               Conread position:
               31-240
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               151
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               116, 0
               

               Conread position:
               31-579
               

               Cow position:
               
               

               Alignm length:
               566
               

               Alignm identity:
               416
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               79, 63
               

               Conread position:
               32-573
               

               Cow position:
               
               

               Alignm length:
               553
               

               Alignm identity:
               420
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               75, 121
               

               Conread position:
               33-579
               

               Cow position:
               
               

               Alignm length:
               581
               

               Alignm identity:
               400
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               74, 115
               

               Conread position:
               34-572
               

               Cow position:
               
               

               Alignm length:
               559
               

               Alignm identity:
               360
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               72, 168
               

               Conread position:
               36-573
               

               Cow position:
               
               

               Alignm length:
               557
               

               Alignm identity:
               407
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 113
               

               Conread position:
               37-554
               

               Cow position:
               
               

               Alignm length:
               529
               

               Alignm identity:
               363
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 96
               

               Conread position:
               37-579
               

               Cow position:
               
               

               Alignm length:
               558
               

               Alignm identity:
               389
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 15
               

               Conread position:
               37-579
               

               Cow position:
               
               

               Alignm length:
               557
               

               Alignm identity:
               408
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 32
               

               Conread position:
               38-579
               

               Cow position:
               
               

               Alignm length:
               572
               

               Alignm identity:
               426
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 119
               

               Conread position:
               41-469
               

               Cow position:
               
               

               Alignm length:
               445
               

               Alignm identity:
               322
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               66, 102
               

               Conread position:
               65-574
               

               Cow position:
               
               

               Alignm length:
               528
               

               Alignm identity:
               382
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 19
               

               Conread position:
               82-557
               

               Cow position:
               
               

               Alignm length:
               488
               

               Alignm identity:
               340
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 61
               

               Conread position:
               93-385
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               218
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               14, 65
               

               Conread position:
               96-568
               

               Cow position:
               
               

               Alignm length:
               490
               

               Alignm identity:
               351
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 16
               

               Conread position:
               99-568
               

               Cow position:
               
               

               Alignm length:
               488
               

               Alignm identity:
               348
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 55
               

               Conread position:
               149-568
               

               Cow position:
               
               

               Alignm length:
               422
               

               Alignm identity:
               286
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 88
               

               Conread position:
               153-574
               

               Cow position:
               
               

               Alignm length:
               433
               

               Alignm identity:
               325
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 288
               

               Conread position:
               158-579
               

               Cow position:
               
               

               Alignm length:
               430
               

               Alignm identity:
               305
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               94, 143
               

               Conread position:
               178-560
               

               Cow position:
               
               

               Alignm length:
               398
               

               Alignm identity:
               282
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 249
               

               Conread position:
               178-574
               

               Cow position:
               
               

               Alignm length:
               411
               

               Alignm identity:
               300
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               69, 195
               

               Conread position:
               235-573
               

               Cow position:
               
               

               Alignm length:
               348
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 10
               

               Conread position:
               235-574
               

               Cow position:
               
               

               Alignm length:
               347
               

               Alignm identity:
               252
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 9
               

               Conread position:
               236-520
               

               Cow position:
               
               

               Alignm length:
               294
               

               Alignm identity:
               217
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 7
               

               Conread position:
               299-574
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               207
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 184
               

               Conread position:
               299-574
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               204
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 184
               

               Conread position:
               379-579
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               148
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               382-579
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               113
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               104, 0
               

               Conread position:
               405-570
               

               Cow position:
               
               

               Alignm length:
               167
               

               Alignm identity:
               134
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               21, 77
               

               Conread position:
               416-572
               

               Cow position:
               
               

               Alignm length:
               160
               

               Alignm identity:
               119
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               10, 71
               

               Conread position:
               422-579
               

               Cow position:
               
               

               Alignm length:
               158
               

               Alignm identity:
               123
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               8, 0
               
Show alignments to all cow chromosomes.