Cow genome map


           Conread name:
           LyN1-MLN01F050049
        

               Conread position:
               1-189
               

               Cow position:
               
               

               Alignm length:
               194
               

               Alignm identity:
               152
               

               Alignm E-value:
               9e-38
               

               Alignm gaps (pig, cow):
               13, 151
               

               Conread position:
               1-553
               

               Cow position:
               
               

               Alignm length:
               567
               

               Alignm identity:
               437
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 62
               

               Conread position:
               1-572
               

               Cow position:
               
               

               Alignm length:
               587
               

               Alignm identity:
               440
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 44
               

               Conread position:
               1-579
               

               Cow position:
               
               

               Alignm length:
               586
               

               Alignm identity:
               418
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               106, 80
               

               Conread position:
               1-579
               

               Cow position:
               
               

               Alignm length:
               597
               

               Alignm identity:
               455
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 157
               

               Conread position:
               2-573
               

               Cow position:
               
               

               Alignm length:
               587
               

               Alignm identity:
               426
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 78
               

               Conread position:
               2-579
               

               Cow position:
               
               

               Alignm length:
               591
               

               Alignm identity:
               420
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               105, 125
               

               Conread position:
               2-579
               

               Cow position:
               
               

               Alignm length:
               593
               

               Alignm identity:
               443
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 12
               

               Conread position:
               3-405
               

               Cow position:
               
               

               Alignm length:
               415
               

               Alignm identity:
               279
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               16, 70
               

               Conread position:
               6-573
               

               Cow position:
               
               

               Alignm length:
               579
               

               Alignm identity:
               437
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               101, 148
               

               Conread position:
               6-579
               

               Cow position:
               
               

               Alignm length:
               588
               

               Alignm identity:
               430
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               99, 142
               

               Conread position:
               7-579
               

               Cow position:
               
               

               Alignm length:
               589
               

               Alignm identity:
               443
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 26
               

               Conread position:
               7-579
               

               Cow position:
               
               

               Alignm length:
               590
               

               Alignm identity:
               439
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               101, 20
               

               Conread position:
               14-575
               

               Cow position:
               
               

               Alignm length:
               581
               

               Alignm identity:
               424
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 137
               

               Conread position:
               16-589
               

               Cow position:
               
               

               Alignm length:
               591
               

               Alignm identity:
               437
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 129
               

               Conread position:
               17-173
               

               Cow position:
               
               

               Alignm length:
               158
               

               Alignm identity:
               114
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               90, 114
               

               Conread position:
               17-410
               

               Cow position:
               
               

               Alignm length:
               408
               

               Alignm identity:
               283
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 110
               

               Conread position:
               17-505
               

               Cow position:
               
               

               Alignm length:
               504
               

               Alignm identity:
               355
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               90, 479
               

               Conread position:
               17-573
               

               Cow position:
               
               

               Alignm length:
               571
               

               Alignm identity:
               408
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               90, 131
               

               Conread position:
               17-579
               

               Cow position:
               
               

               Alignm length:
               591
               

               Alignm identity:
               415
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               90, 21
               

               Conread position:
               17-579
               

               Cow position:
               
               

               Alignm length:
               583
               

               Alignm identity:
               412
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 484
               

               Conread position:
               17-579
               

               Cow position:
               
               

               Alignm length:
               579
               

               Alignm identity:
               418
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               90, 114
               

               Conread position:
               20-563
               

               Cow position:
               
               

               Alignm length:
               559
               

               Alignm identity:
               431
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               87, 18
               

               Conread position:
               21-250
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               170
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               86, 65
               

               Conread position:
               21-548
               

               Cow position:
               
               

               Alignm length:
               540
               

               Alignm identity:
               357
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 32
               

               Conread position:
               21-573
               

               Cow position:
               
               

               Alignm length:
               568
               

               Alignm identity:
               427
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               86, 133
               

               Conread position:
               21-579
               

               Cow position:
               
               

               Alignm length:
               570
               

               Alignm identity:
               422
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               86, 136
               

               Conread position:
               21-579
               

               Cow position:
               
               

               Alignm length:
               572
               

               Alignm identity:
               425
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               86, 118
               

               Conread position:
               22-573
               

               Cow position:
               
               

               Alignm length:
               562
               

               Alignm identity:
               403
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               84, 127
               

               Conread position:
               22-574
               

               Cow position:
               
               

               Alignm length:
               562
               

               Alignm identity:
               426
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               86, 126
               

               Conread position:
               23-189
               

               Cow position:
               
               

               Alignm length:
               174
               

               Alignm identity:
               132
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               84, 95
               

               Conread position:
               23-579
               

               Cow position:
               
               

               Alignm length:
               571
               

               Alignm identity:
               436
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 146
               

               Conread position:
               23-579
               

               Cow position:
               
               

               Alignm length:
               577
               

               Alignm identity:
               425
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               85, 111
               

               Conread position:
               27-355
               

               Cow position:
               
               

               Alignm length:
               343
               

               Alignm identity:
               255
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 14
               

               Conread position:
               27-567
               

               Cow position:
               
               

               Alignm length:
               552
               

               Alignm identity:
               350
               

               Alignm E-value:
               9e-38
               

               Alignm gaps (pig, cow):
               80, 38
               

               Conread position:
               27-579
               

               Cow position:
               
               

               Alignm length:
               567
               

               Alignm identity:
               406
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               80, 120
               

               Conread position:
               28-267
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               165
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               208, 71
               

               Conread position:
               28-550
               

               Cow position:
               
               

               Alignm length:
               533
               

               Alignm identity:
               344
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               79, 44
               

               Conread position:
               28-586
               

               Cow position:
               
               

               Alignm length:
               574
               

               Alignm identity:
               418
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 53
               

               Conread position:
               30-568
               

               Cow position:
               
               

               Alignm length:
               551
               

               Alignm identity:
               420
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 118
               

               Conread position:
               30-573
               

               Cow position:
               
               

               Alignm length:
               561
               

               Alignm identity:
               373
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 36
               

               Conread position:
               30-579
               

               Cow position:
               
               

               Alignm length:
               562
               

               Alignm identity:
               434
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 463
               

               Conread position:
               30-579
               

               Cow position:
               
               

               Alignm length:
               566
               

               Alignm identity:
               432
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               79, 48
               

               Conread position:
               31-546
               

               Cow position:
               
               

               Alignm length:
               526
               

               Alignm identity:
               339
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               35, 99
               

               Conread position:
               31-579
               

               Cow position:
               
               

               Alignm length:
               563
               

               Alignm identity:
               405
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               76, 100
               

               Conread position:
               38-579
               

               Cow position:
               
               

               Alignm length:
               552
               

               Alignm identity:
               422
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               70, 43
               

               Conread position:
               39-567
               

               Cow position:
               
               

               Alignm length:
               542
               

               Alignm identity:
               406
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               69, 17
               

               Conread position:
               40-512
               

               Cow position:
               
               

               Alignm length:
               487
               

               Alignm identity:
               351
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               67, 108
               

               Conread position:
               41-579
               

               Cow position:
               
               

               Alignm length:
               556
               

               Alignm identity:
               398
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               206, 66
               

               Conread position:
               45-387
               

               Cow position:
               
               

               Alignm length:
               357
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 104
               

               Conread position:
               52-465
               

               Cow position:
               
               

               Alignm length:
               426
               

               Alignm identity:
               313
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 103
               

               Conread position:
               65-355
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               219
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               43, 53
               

               Conread position:
               142-540
               

               Cow position:
               
               

               Alignm length:
               412
               

               Alignm identity:
               258
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               82, 12
               

               Conread position:
               142-574
               

               Cow position:
               
               

               Alignm length:
               443
               

               Alignm identity:
               314
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 15
               

               Conread position:
               147-579
               

               Cow position:
               
               

               Alignm length:
               444
               

               Alignm identity:
               336
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               89, 268
               

               Conread position:
               147-579
               

               Cow position:
               
               

               Alignm length:
               439
               

               Alignm identity:
               317
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 16
               

               Conread position:
               178-579
               

               Cow position:
               
               

               Alignm length:
               413
               

               Alignm identity:
               306
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 226
               

               Conread position:
               181-579
               

               Cow position:
               
               

               Alignm length:
               411
               

               Alignm identity:
               297
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               66, 244
               

               Conread position:
               224-567
               

               Cow position:
               
               

               Alignm length:
               358
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 271
               

               Conread position:
               240-568
               

               Cow position:
               
               

               Alignm length:
               333
               

               Alignm identity:
               253
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 49
               

               Conread position:
               241-560
               

               Cow position:
               
               

               Alignm length:
               327
               

               Alignm identity:
               242
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 207
               

               Conread position:
               245-579
               

               Cow position:
               
               

               Alignm length:
               344
               

               Alignm identity:
               252
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 245
               

               Conread position:
               312-579
               

               Cow position:
               
               

               Alignm length:
               271
               

               Alignm identity:
               204
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 91
               

               Conread position:
               312-579
               

               Cow position:
               
               

               Alignm length:
               270
               

               Alignm identity:
               203
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               18, 77
               

               Conread position:
               328-606
               

               Cow position:
               
               

               Alignm length:
               283
               

               Alignm identity:
               201
               

               Alignm E-value:
               9e-38
               

               Alignm gaps (pig, cow):
               22, 49
               

               Conread position:
               362-573
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               162
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               50, 125
               

               Conread position:
               368-544
               

               Cow position:
               
               

               Alignm length:
               178
               

               Alignm identity:
               129
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               17, 22
               

               Conread position:
               368-574
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               160
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               58, 48
               

               Conread position:
               368-579
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               161
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               113, 0
               

               Conread position:
               369-579
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               154
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               112, 0
               

               Conread position:
               377-579
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               154
               

               Alignm E-value:
               9e-38
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               416-579
               

               Cow position:
               
               

               Alignm length:
               165
               

               Alignm identity:
               128
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               10, 69
               

               Conread position:
               425-579
               

               Cow position:
               
               

               Alignm length:
               155
               

               Alignm identity:
               118
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               61, 0
               
Show alignments to all cow chromosomes.