Cow genome map


           Conread name:
           LyN1-MLN01F050049
        

               Conread position:
               1-151
               

               Cow position:
               
               

               Alignm length:
               153
               

               Alignm identity:
               112
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               105, 40
               

               Conread position:
               1-563
               

               Cow position:
               
               

               Alignm length:
               579
               

               Alignm identity:
               418
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               106, 50
               

               Conread position:
               1-566
               

               Cow position:
               
               

               Alignm length:
               576
               

               Alignm identity:
               407
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               106, 133
               

               Conread position:
               1-568
               

               Cow position:
               
               

               Alignm length:
               581
               

               Alignm identity:
               422
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 79
               

               Conread position:
               1-568
               

               Cow position:
               
               

               Alignm length:
               599
               

               Alignm identity:
               402
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 163
               

               Conread position:
               1-573
               

               Cow position:
               
               

               Alignm length:
               587
               

               Alignm identity:
               434
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 158
               

               Conread position:
               1-573
               

               Cow position:
               
               

               Alignm length:
               592
               

               Alignm identity:
               430
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 152
               

               Conread position:
               2-533
               

               Cow position:
               
               

               Alignm length:
               571
               

               Alignm identity:
               360
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               17, 143
               

               Conread position:
               2-579
               

               Cow position:
               
               

               Alignm length:
               595
               

               Alignm identity:
               430
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 168
               

               Conread position:
               3-360
               

               Cow position:
               
               

               Alignm length:
               368
               

               Alignm identity:
               278
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 26
               

               Conread position:
               6-579
               

               Cow position:
               
               

               Alignm length:
               586
               

               Alignm identity:
               432
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 82
               

               Conread position:
               7-586
               

               Cow position:
               
               

               Alignm length:
               595
               

               Alignm identity:
               424
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               100, 20
               

               Conread position:
               16-169
               

               Cow position:
               
               

               Alignm length:
               156
               

               Alignm identity:
               128
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               90, 133
               

               Conread position:
               16-579
               

               Cow position:
               
               

               Alignm length:
               572
               

               Alignm identity:
               409
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               89, 36
               

               Conread position:
               17-173
               

               Cow position:
               
               

               Alignm length:
               158
               

               Alignm identity:
               120
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               89, 131
               

               Conread position:
               17-279
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               186
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               90, 142
               

               Conread position:
               17-392
               

               Cow position:
               
               

               Alignm length:
               386
               

               Alignm identity:
               262
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               220, 65
               

               Conread position:
               17-466
               

               Cow position:
               
               

               Alignm length:
               465
               

               Alignm identity:
               323
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               90, 131
               

               Conread position:
               17-574
               

               Cow position:
               
               

               Alignm length:
               569
               

               Alignm identity:
               413
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               90, 131
               

               Conread position:
               17-579
               

               Cow position:
               
               

               Alignm length:
               586
               

               Alignm identity:
               370
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               89, 111
               

               Conread position:
               17-579
               

               Cow position:
               
               

               Alignm length:
               575
               

               Alignm identity:
               410
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               90, 60
               

               Conread position:
               17-579
               

               Cow position:
               
               

               Alignm length:
               575
               

               Alignm identity:
               409
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               91, 476
               

               Conread position:
               17-579
               

               Cow position:
               
               

               Alignm length:
               574
               

               Alignm identity:
               403
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 131
               

               Conread position:
               17-579
               

               Cow position:
               
               

               Alignm length:
               575
               

               Alignm identity:
               421
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               90, 110
               

               Conread position:
               17-579
               

               Cow position:
               
               

               Alignm length:
               577
               

               Alignm identity:
               398
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               90, 44
               

               Conread position:
               17-579
               

               Cow position:
               
               

               Alignm length:
               578
               

               Alignm identity:
               394
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               90, 113
               

               Conread position:
               17-579
               

               Cow position:
               
               

               Alignm length:
               578
               

               Alignm identity:
               408
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               90, 114
               

               Conread position:
               18-318
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               200
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               89, 79
               

               Conread position:
               18-579
               

               Cow position:
               
               

               Alignm length:
               574
               

               Alignm identity:
               402
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               89, 43
               

               Conread position:
               20-183
               

               Cow position:
               
               

               Alignm length:
               165
               

               Alignm identity:
               128
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               87, 42
               

               Conread position:
               20-546
               

               Cow position:
               
               

               Alignm length:
               537
               

               Alignm identity:
               400
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               87, 128
               

               Conread position:
               21-420
               

               Cow position:
               
               

               Alignm length:
               420
               

               Alignm identity:
               309
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               85, 128
               

               Conread position:
               21-533
               

               Cow position:
               
               

               Alignm length:
               527
               

               Alignm identity:
               392
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               86, 133
               

               Conread position:
               21-573
               

               Cow position:
               
               

               Alignm length:
               566
               

               Alignm identity:
               414
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               86, 65
               

               Conread position:
               21-574
               

               Cow position:
               
               

               Alignm length:
               562
               

               Alignm identity:
               401
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               290, 25
               

               Conread position:
               21-579
               

               Cow position:
               
               

               Alignm length:
               577
               

               Alignm identity:
               432
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               86, 133
               

               Conread position:
               21-579
               

               Cow position:
               
               

               Alignm length:
               573
               

               Alignm identity:
               429
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               86, 133
               

               Conread position:
               21-579
               

               Cow position:
               
               

               Alignm length:
               575
               

               Alignm identity:
               429
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               85, 110
               

               Conread position:
               22-568
               

               Cow position:
               
               

               Alignm length:
               562
               

               Alignm identity:
               413
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               85, 16
               

               Conread position:
               23-164
               

               Cow position:
               
               

               Alignm length:
               143
               

               Alignm identity:
               110
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               23-494
               

               Cow position:
               
               

               Alignm length:
               486
               

               Alignm identity:
               370
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               85, 31
               

               Conread position:
               23-568
               

               Cow position:
               
               

               Alignm length:
               567
               

               Alignm identity:
               420
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               119, 479
               

               Conread position:
               23-579
               

               Cow position:
               
               

               Alignm length:
               570
               

               Alignm identity:
               421
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 126
               

               Conread position:
               23-585
               

               Cow position:
               
               

               Alignm length:
               576
               

               Alignm identity:
               427
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               121, 67
               

               Conread position:
               27-309
               

               Cow position:
               
               

               Alignm length:
               286
               

               Alignm identity:
               206
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               79, 53
               

               Conread position:
               27-497
               

               Cow position:
               
               

               Alignm length:
               481
               

               Alignm identity:
               345
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               80, 121
               

               Conread position:
               27-568
               

               Cow position:
               
               

               Alignm length:
               554
               

               Alignm identity:
               348
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               76, 59
               

               Conread position:
               27-569
               

               Cow position:
               
               

               Alignm length:
               553
               

               Alignm identity:
               406
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               79, 122
               

               Conread position:
               28-352
               

               Cow position:
               
               

               Alignm length:
               337
               

               Alignm identity:
               231
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               79, 35
               

               Conread position:
               30-525
               

               Cow position:
               
               

               Alignm length:
               509
               

               Alignm identity:
               377
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 118
               

               Conread position:
               30-538
               

               Cow position:
               
               

               Alignm length:
               525
               

               Alignm identity:
               389
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               210, 73
               

               Conread position:
               30-563
               

               Cow position:
               
               

               Alignm length:
               555
               

               Alignm identity:
               396
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               76, 118
               

               Conread position:
               30-566
               

               Cow position:
               
               

               Alignm length:
               548
               

               Alignm identity:
               401
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               77, 329
               

               Conread position:
               30-574
               

               Cow position:
               
               

               Alignm length:
               561
               

               Alignm identity:
               409
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               77, 134
               

               Conread position:
               30-579
               

               Cow position:
               
               

               Alignm length:
               564
               

               Alignm identity:
               421
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 118
               

               Conread position:
               31-560
               

               Cow position:
               
               

               Alignm length:
               544
               

               Alignm identity:
               406
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 63
               

               Conread position:
               31-579
               

               Cow position:
               
               

               Alignm length:
               563
               

               Alignm identity:
               403
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               76, 117
               

               Conread position:
               31-585
               

               Cow position:
               
               

               Alignm length:
               566
               

               Alignm identity:
               356
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               77, 96
               

               Conread position:
               36-550
               

               Cow position:
               
               

               Alignm length:
               519
               

               Alignm identity:
               394
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               188, 71
               

               Conread position:
               36-568
               

               Cow position:
               
               

               Alignm length:
               546
               

               Alignm identity:
               355
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               71, 95
               

               Conread position:
               41-550
               

               Cow position:
               
               

               Alignm length:
               538
               

               Alignm identity:
               380
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               66, 107
               

               Conread position:
               49-574
               

               Cow position:
               
               

               Alignm length:
               540
               

               Alignm identity:
               405
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 105
               

               Conread position:
               142-576
               

               Cow position:
               
               

               Alignm length:
               452
               

               Alignm identity:
               314
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               103, 303
               

               Conread position:
               147-374
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               169
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               122, 23
               

               Conread position:
               149-566
               

               Cow position:
               
               

               Alignm length:
               423
               

               Alignm identity:
               279
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               98, 110
               

               Conread position:
               178-579
               

               Cow position:
               
               

               Alignm length:
               416
               

               Alignm identity:
               311
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 19
               

               Conread position:
               223-573
               

               Cow position:
               
               

               Alignm length:
               363
               

               Alignm identity:
               229
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               107, 78
               

               Conread position:
               228-561
               

               Cow position:
               
               

               Alignm length:
               344
               

               Alignm identity:
               226
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               14, 263
               

               Conread position:
               241-563
               

               Cow position:
               
               

               Alignm length:
               332
               

               Alignm identity:
               253
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 222
               

               Conread position:
               257-579
               

               Cow position:
               
               

               Alignm length:
               331
               

               Alignm identity:
               246
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 232
               

               Conread position:
               261-537
               

               Cow position:
               
               

               Alignm length:
               295
               

               Alignm identity:
               208
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               8, 238
               

               Conread position:
               270-579
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               237
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 219
               

               Conread position:
               328-573
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               186
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               153, 0
               

               Conread position:
               368-579
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               163
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               112, 0
               

               Conread position:
               369-573
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               153
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               417-573
               

               Cow position:
               
               

               Alignm length:
               158
               

               Alignm identity:
               124
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               9, 70
               

               Conread position:
               443-579
               

               Cow position:
               
               

               Alignm length:
               137
               

               Alignm identity:
               104
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               43, 0
               
Show alignments to all cow chromosomes.