Cow genome map


           Conread name:
           LyN1-MLN01F050049
        

               Conread position:
               1-210
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               157
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               39, 130
               

               Conread position:
               1-359
               

               Cow position:
               
               

               Alignm length:
               380
               

               Alignm identity:
               276
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 154
               

               Conread position:
               1-472
               

               Cow position:
               
               

               Alignm length:
               487
               

               Alignm identity:
               352
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 148
               

               Conread position:
               1-524
               

               Cow position:
               
               

               Alignm length:
               536
               

               Alignm identity:
               408
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               105, 113
               

               Conread position:
               1-567
               

               Cow position:
               
               

               Alignm length:
               587
               

               Alignm identity:
               417
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 150
               

               Conread position:
               1-567
               

               Cow position:
               
               

               Alignm length:
               570
               

               Alignm identity:
               400
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               269, 89
               

               Conread position:
               1-579
               

               Cow position:
               
               

               Alignm length:
               595
               

               Alignm identity:
               425
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 177
               

               Conread position:
               1-579
               

               Cow position:
               
               

               Alignm length:
               587
               

               Alignm identity:
               440
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               106, 19
               

               Conread position:
               1-579
               

               Cow position:
               
               

               Alignm length:
               593
               

               Alignm identity:
               436
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               106, 153
               

               Conread position:
               2-242
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               172
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               105, 152
               

               Conread position:
               2-321
               

               Cow position:
               
               

               Alignm length:
               326
               

               Alignm identity:
               212
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               174, 6
               

               Conread position:
               2-407
               

               Cow position:
               
               

               Alignm length:
               422
               

               Alignm identity:
               296
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 65
               

               Conread position:
               2-563
               

               Cow position:
               
               

               Alignm length:
               573
               

               Alignm identity:
               409
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               106, 24
               

               Conread position:
               2-579
               

               Cow position:
               
               

               Alignm length:
               592
               

               Alignm identity:
               435
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               108, 7
               

               Conread position:
               2-579
               

               Cow position:
               
               

               Alignm length:
               589
               

               Alignm identity:
               412
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 19
               

               Conread position:
               3-186
               

               Cow position:
               
               

               Alignm length:
               186
               

               Alignm identity:
               141
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               14, 123
               

               Conread position:
               3-328
               

               Cow position:
               
               

               Alignm length:
               339
               

               Alignm identity:
               246
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 147
               

               Conread position:
               3-538
               

               Cow position:
               
               

               Alignm length:
               553
               

               Alignm identity:
               403
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 93
               

               Conread position:
               3-567
               

               Cow position:
               
               

               Alignm length:
               576
               

               Alignm identity:
               427
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 98
               

               Conread position:
               6-341
               

               Cow position:
               
               

               Alignm length:
               343
               

               Alignm identity:
               244
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               100, 110
               

               Conread position:
               6-579
               

               Cow position:
               
               

               Alignm length:
               595
               

               Alignm identity:
               423
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               6, 63
               

               Conread position:
               6-579
               

               Cow position:
               
               

               Alignm length:
               589
               

               Alignm identity:
               407
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               6, 14
               

               Conread position:
               7-165
               

               Cow position:
               
               

               Alignm length:
               160
               

               Alignm identity:
               122
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               97, 139
               

               Conread position:
               8-198
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               137
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               17, 100
               

               Conread position:
               8-579
               

               Cow position:
               
               

               Alignm length:
               588
               

               Alignm identity:
               434
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 19
               

               Conread position:
               9-250
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               179
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               98, 18
               

               Conread position:
               10-572
               

               Cow position:
               
               

               Alignm length:
               569
               

               Alignm identity:
               403
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               98, 24
               

               Conread position:
               16-395
               

               Cow position:
               
               

               Alignm length:
               396
               

               Alignm identity:
               284
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 133
               

               Conread position:
               16-563
               

               Cow position:
               
               

               Alignm length:
               576
               

               Alignm identity:
               413
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               76, 146
               

               Conread position:
               16-565
               

               Cow position:
               
               

               Alignm length:
               565
               

               Alignm identity:
               400
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               137, 30
               

               Conread position:
               16-566
               

               Cow position:
               
               

               Alignm length:
               557
               

               Alignm identity:
               401
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               91, 131
               

               Conread position:
               17-187
               

               Cow position:
               
               

               Alignm length:
               172
               

               Alignm identity:
               123
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               90, 114
               

               Conread position:
               17-309
               

               Cow position:
               
               

               Alignm length:
               296
               

               Alignm identity:
               211
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               89, 131
               

               Conread position:
               17-480
               

               Cow position:
               
               

               Alignm length:
               479
               

               Alignm identity:
               342
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               90, 131
               

               Conread position:
               17-540
               

               Cow position:
               
               

               Alignm length:
               535
               

               Alignm identity:
               395
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               90, 131
               

               Conread position:
               17-555
               

               Cow position:
               
               

               Alignm length:
               555
               

               Alignm identity:
               397
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               90, 479
               

               Conread position:
               17-567
               

               Cow position:
               
               

               Alignm length:
               568
               

               Alignm identity:
               403
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               90, 131
               

               Conread position:
               17-579
               

               Cow position:
               
               

               Alignm length:
               577
               

               Alignm identity:
               418
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               90, 114
               

               Conread position:
               17-579
               

               Cow position:
               
               

               Alignm length:
               573
               

               Alignm identity:
               423
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               90, 114
               

               Conread position:
               17-579
               

               Cow position:
               
               

               Alignm length:
               573
               

               Alignm identity:
               406
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               90, 138
               

               Conread position:
               17-579
               

               Cow position:
               
               

               Alignm length:
               577
               

               Alignm identity:
               421
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               90, 131
               

               Conread position:
               17-579
               

               Cow position:
               
               

               Alignm length:
               583
               

               Alignm identity:
               398
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               89, 110
               

               Conread position:
               17-579
               

               Cow position:
               
               

               Alignm length:
               579
               

               Alignm identity:
               404
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               90, 135
               

               Conread position:
               18-353
               

               Cow position:
               
               

               Alignm length:
               346
               

               Alignm identity:
               246
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               88, 111
               

               Conread position:
               18-574
               

               Cow position:
               
               

               Alignm length:
               567
               

               Alignm identity:
               410
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 131
               

               Conread position:
               21-573
               

               Cow position:
               
               

               Alignm length:
               562
               

               Alignm identity:
               434
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               86, 37
               

               Conread position:
               21-573
               

               Cow position:
               
               

               Alignm length:
               567
               

               Alignm identity:
               428
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               86, 133
               

               Conread position:
               21-573
               

               Cow position:
               
               

               Alignm length:
               565
               

               Alignm identity:
               416
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               87, 26
               

               Conread position:
               21-573
               

               Cow position:
               
               

               Alignm length:
               567
               

               Alignm identity:
               425
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               86, 133
               

               Conread position:
               21-579
               

               Cow position:
               
               

               Alignm length:
               573
               

               Alignm identity:
               430
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               86, 41
               

               Conread position:
               21-579
               

               Cow position:
               
               

               Alignm length:
               569
               

               Alignm identity:
               420
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               86, 133
               

               Conread position:
               21-579
               

               Cow position:
               
               

               Alignm length:
               572
               

               Alignm identity:
               431
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               86, 133
               

               Conread position:
               21-579
               

               Cow position:
               
               

               Alignm length:
               573
               

               Alignm identity:
               414
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               86, 127
               

               Conread position:
               22-579
               

               Cow position:
               
               

               Alignm length:
               572
               

               Alignm identity:
               431
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               85, 132
               

               Conread position:
               27-349
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               247
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               219, 121
               

               Conread position:
               27-579
               

               Cow position:
               
               

               Alignm length:
               564
               

               Alignm identity:
               387
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               79, 121
               

               Conread position:
               28-462
               

               Cow position:
               
               

               Alignm length:
               452
               

               Alignm identity:
               286
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               48, 116
               

               Conread position:
               28-579
               

               Cow position:
               
               

               Alignm length:
               564
               

               Alignm identity:
               430
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 127
               

               Conread position:
               30-278
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               193
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 0
               

               Conread position:
               30-579
               

               Cow position:
               
               

               Alignm length:
               563
               

               Alignm identity:
               417
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               77, 118
               

               Conread position:
               31-573
               

               Cow position:
               
               

               Alignm length:
               565
               

               Alignm identity:
               378
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 19
               

               Conread position:
               31-606
               

               Cow position:
               
               

               Alignm length:
               598
               

               Alignm identity:
               423
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               77, 117
               

               Conread position:
               32-579
               

               Cow position:
               
               

               Alignm length:
               562
               

               Alignm identity:
               427
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               75, 116
               

               Conread position:
               35-308
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               199
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               73, 52
               

               Conread position:
               38-559
               

               Cow position:
               
               

               Alignm length:
               542
               

               Alignm identity:
               348
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               69, 52
               

               Conread position:
               41-579
               

               Cow position:
               
               

               Alignm length:
               555
               

               Alignm identity:
               402
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               66, 113
               

               Conread position:
               41-579
               

               Cow position:
               
               

               Alignm length:
               548
               

               Alignm identity:
               411
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               228, 106
               

               Conread position:
               54-586
               

               Cow position:
               
               

               Alignm length:
               559
               

               Alignm identity:
               391
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 94
               

               Conread position:
               64-579
               

               Cow position:
               
               

               Alignm length:
               518
               

               Alignm identity:
               382
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 70
               

               Conread position:
               76-532
               

               Cow position:
               
               

               Alignm length:
               475
               

               Alignm identity:
               307
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               58, 31
               

               Conread position:
               82-347
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               194
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               25, 49
               

               Conread position:
               83-579
               

               Cow position:
               
               

               Alignm length:
               512
               

               Alignm identity:
               361
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 65
               

               Conread position:
               85-579
               

               Cow position:
               
               

               Alignm length:
               508
               

               Alignm identity:
               363
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 170
               

               Conread position:
               116-573
               

               Cow position:
               
               

               Alignm length:
               469
               

               Alignm identity:
               309
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               91, 31
               

               Conread position:
               132-579
               

               Cow position:
               
               

               Alignm length:
               468
               

               Alignm identity:
               298
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               8, 48
               

               Conread position:
               139-561
               

               Cow position:
               
               

               Alignm length:
               435
               

               Alignm identity:
               307
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 86
               

               Conread position:
               178-579
               

               Cow position:
               
               

               Alignm length:
               415
               

               Alignm identity:
               286
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               74, 9
               

               Conread position:
               181-579
               

               Cow position:
               
               

               Alignm length:
               413
               

               Alignm identity:
               290
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 28
               

               Conread position:
               184-579
               

               Cow position:
               
               

               Alignm length:
               409
               

               Alignm identity:
               299
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 310
               

               Conread position:
               190-574
               

               Cow position:
               
               

               Alignm length:
               395
               

               Alignm identity:
               255
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               16, 7
               

               Conread position:
               219-579
               

               Cow position:
               
               

               Alignm length:
               374
               

               Alignm identity:
               271
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 275
               

               Conread position:
               222-579
               

               Cow position:
               
               

               Alignm length:
               369
               

               Alignm identity:
               280
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 217
               

               Conread position:
               223-566
               

               Cow position:
               
               

               Alignm length:
               349
               

               Alignm identity:
               254
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 14
               

               Conread position:
               235-574
               

               Cow position:
               
               

               Alignm length:
               352
               

               Alignm identity:
               252
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 10
               

               Conread position:
               235-590
               

               Cow position:
               
               

               Alignm length:
               371
               

               Alignm identity:
               238
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               34, 8
               

               Conread position:
               239-573
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               248
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               30, 14
               

               Conread position:
               268-579
               

               Cow position:
               
               

               Alignm length:
               320
               

               Alignm identity:
               215
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               55, 146
               

               Conread position:
               277-579
               

               Cow position:
               
               

               Alignm length:
               311
               

               Alignm identity:
               228
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 211
               

               Conread position:
               283-484
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               140
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               44, 171
               

               Conread position:
               283-579
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               231
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 164
               

               Conread position:
               295-567
               

               Cow position:
               
               

               Alignm length:
               276
               

               Alignm identity:
               185
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               72, 29
               

               Conread position:
               309-530
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               24, 74
               

               Conread position:
               328-573
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               186
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               29, 70
               

               Conread position:
               328-579
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               176
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               98, 53
               

               Conread position:
               328-579
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               192
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               153, 0
               

               Conread position:
               334-520
               

               Cow position:
               
               

               Alignm length:
               187
               

               Alignm identity:
               141
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               335-579
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               178
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               99, 151
               

               Conread position:
               342-579
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               186
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               139, 0
               

               Conread position:
               370-573
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               158
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               110, 0
               

               Conread position:
               378-585
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               143
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               103, 0
               

               Conread position:
               404-563
               

               Cow position:
               
               

               Alignm length:
               160
               

               Alignm identity:
               126
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               77, 0
               
Show alignments to all cow chromosomes.