Cow genome map
| Conread name: | LyN1-MLN01F050049 |
| Conread position: | 1-566 |
| Cow position: | chr23:4434021-4434585 (view UCSC Genome Browser custom track) |
| Alignm length: | 580 |
| Alignm identity: | 414 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 46 |
| Conread position: | 1-568 |
| Cow position: | chr23:16617287-16616719 (view UCSC Genome Browser custom track) |
| Alignm length: | 588 |
| Alignm identity: | 425 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 127 |
| Conread position: | 1-573 |
| Cow position: | chr23:4641075-4640492 (view UCSC Genome Browser custom track) |
| Alignm length: | 588 |
| Alignm identity: | 436 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 33 |
| Conread position: | 1-573 |
| Cow position: | chr23:15220347-15219759 (view UCSC Genome Browser custom track) |
| Alignm length: | 601 |
| Alignm identity: | 427 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 134 |
| Conread position: | 1-579 |
| Cow position: | chr23:2027577-2026981 (view UCSC Genome Browser custom track) |
| Alignm length: | 600 |
| Alignm identity: | 432 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 433 |
| Conread position: | 1-579 |
| Cow position: | chr23:4815624-4816213 (view UCSC Genome Browser custom track) |
| Alignm length: | 595 |
| Alignm identity: | 434 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 106, 153 |
| Conread position: | 1-579 |
| Cow position: | chr23:27399052-27399642 (view UCSC Genome Browser custom track) |
| Alignm length: | 594 |
| Alignm identity: | 439 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 77, 154 |
| Conread position: | 1-580 |
| Cow position: | chr23:19951039-19950444 (view UCSC Genome Browser custom track) |
| Alignm length: | 599 |
| Alignm identity: | 416 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 454 |
| Conread position: | 2-362 |
| Cow position: | chr23:2715902-2716269 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 274 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 147 |
| Conread position: | 2-399 |
| Cow position: | chr23:31652290-31651913 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 271 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 10, 97 |
| Conread position: | 2-441 |
| Cow position: | chr23:22876077-22875632 (view UCSC Genome Browser custom track) |
| Alignm length: | 454 |
| Alignm identity: | 328 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 67 |
| Conread position: | 2-579 |
| Cow position: | chr23:34174738-34175317 (view UCSC Genome Browser custom track) |
| Alignm length: | 595 |
| Alignm identity: | 385 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 127 |
| Conread position: | 3-332 |
| Cow position: | chr23:1141120-1141444 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 123 |
| Conread position: | 3-579 |
| Cow position: | chr23:22147708-22147112 (view UCSC Genome Browser custom track) |
| Alignm length: | 601 |
| Alignm identity: | 434 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 152 |
| Conread position: | 4-573 |
| Cow position: | chr23:19332845-19332275 (view UCSC Genome Browser custom track) |
| Alignm length: | 588 |
| Alignm identity: | 387 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 103, 56 |
| Conread position: | 6-196 |
| Cow position: | chr23:2757053-2757246 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 137 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 80, 146 |
| Conread position: | 6-572 |
| Cow position: | chr23:1025496-1024929 (view UCSC Genome Browser custom track) |
| Alignm length: | 580 |
| Alignm identity: | 426 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 6, 122 |
| Conread position: | 6-572 |
| Cow position: | chr23:11778041-11778601 (view UCSC Genome Browser custom track) |
| Alignm length: | 573 |
| Alignm identity: | 381 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 147 |
| Conread position: | 6-573 |
| Cow position: | chr23:15525167-15525742 (view UCSC Genome Browser custom track) |
| Alignm length: | 579 |
| Alignm identity: | 425 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 6, 149 |
| Conread position: | 6-579 |
| Cow position: | chr23:15176605-15177212 (view UCSC Genome Browser custom track) |
| Alignm length: | 611 |
| Alignm identity: | 432 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 6, 512 |
| Conread position: | 7-567 |
| Cow position: | chr23:5875213-5874648 (view UCSC Genome Browser custom track) |
| Alignm length: | 572 |
| Alignm identity: | 432 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 20 |
| Conread position: | 7-569 |
| Cow position: | chr23:28912967-28913525 (view UCSC Genome Browser custom track) |
| Alignm length: | 577 |
| Alignm identity: | 421 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 148 |
| Conread position: | 7-574 |
| Cow position: | chr23:3013190-3013779 (view UCSC Genome Browser custom track) |
| Alignm length: | 598 |
| Alignm identity: | 433 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 97, 20 |
| Conread position: | 8-579 |
| Cow position: | chr23:967791-967212 (view UCSC Genome Browser custom track) |
| Alignm length: | 588 |
| Alignm identity: | 426 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 146 |
| Conread position: | 17-235 |
| Cow position: | chr23:14975196-14974985 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 90, 113 |
| Conread position: | 17-379 |
| Cow position: | chr23:19449588-19449963 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 238 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 25, 113 |
| Conread position: | 17-579 |
| Cow position: | chr23:4359403-4359968 (view UCSC Genome Browser custom track) |
| Alignm length: | 577 |
| Alignm identity: | 417 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 36 |
| Conread position: | 17-579 |
| Cow position: | chr23:20301778-20302351 (view UCSC Genome Browser custom track) |
| Alignm length: | 580 |
| Alignm identity: | 413 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 19 |
| Conread position: | 18-420 |
| Cow position: | chr23:19017276-19017675 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 88, 110 |
| Conread position: | 18-567 |
| Cow position: | chr23:13508639-13509184 (view UCSC Genome Browser custom track) |
| Alignm length: | 566 |
| Alignm identity: | 362 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 89, 111 |
| Conread position: | 21-569 |
| Cow position: | chr23:19489110-19489670 (view UCSC Genome Browser custom track) |
| Alignm length: | 564 |
| Alignm identity: | 418 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 85, 128 |
| Conread position: | 21-579 |
| Cow position: | chr23:2795992-2795427 (view UCSC Genome Browser custom track) |
| Alignm length: | 569 |
| Alignm identity: | 425 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 86, 133 |
| Conread position: | 21-579 |
| Cow position: | chr23:3882125-3881567 (view UCSC Genome Browser custom track) |
| Alignm length: | 569 |
| Alignm identity: | 417 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 86, 133 |
| Conread position: | 21-580 |
| Cow position: | chr23:36031800-36031234 (view UCSC Genome Browser custom track) |
| Alignm length: | 569 |
| Alignm identity: | 424 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 86, 469 |
| Conread position: | 23-173 |
| Cow position: | chr23:2524895-2524749 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 117 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 84, 16 |
| Conread position: | 23-358 |
| Cow position: | chr23:2765796-2765462 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 248 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 83, 125 |
| Conread position: | 23-567 |
| Cow position: | chr23:989069-988520 (view UCSC Genome Browser custom track) |
| Alignm length: | 561 |
| Alignm identity: | 410 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 85, 125 |
| Conread position: | 24-235 |
| Cow position: | chr23:14966400-14966189 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 163 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 9, 18 |
| Conread position: | 24-579 |
| Cow position: | chr23:28216863-28217428 (view UCSC Genome Browser custom track) |
| Alignm length: | 571 |
| Alignm identity: | 409 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 125 |
| Conread position: | 27-311 |
| Cow position: | chr23:1330710-1330425 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 223 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 80, 128 |
| Conread position: | 27-453 |
| Cow position: | chr23:4509682-4510113 (view UCSC Genome Browser custom track) |
| Alignm length: | 435 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 79, 121 |
| Conread position: | 30-579 |
| Cow position: | chr23:4276537-4277093 (view UCSC Genome Browser custom track) |
| Alignm length: | 562 |
| Alignm identity: | 419 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 79, 118 |
| Conread position: | 30-586 |
| Cow position: | chr23:5779507-5778942 (view UCSC Genome Browser custom track) |
| Alignm length: | 570 |
| Alignm identity: | 421 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 77, 118 |
| Conread position: | 32-452 |
| Cow position: | chr23:2045609-2046031 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 124 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 74, 68 |
| Conread position: | 35-309 |
| Cow position: | chr23:31595599-31595315 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 215 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 119 |
| Conread position: | 36-574 |
| Cow position: | chr23:7273246-7273764 (view UCSC Genome Browser custom track) |
| Alignm length: | 546 |
| Alignm identity: | 404 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 85 |
| Conread position: | 39-355 |
| Cow position: | chr23:2574153-2574481 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 120 |
| Conread position: | 41-518 |
| Cow position: | chr23:16481761-16481296 (view UCSC Genome Browser custom track) |
| Alignm length: | 493 |
| Alignm identity: | 345 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 107 |
| Conread position: | 48-573 |
| Cow position: | chr23:30636705-30636170 (view UCSC Genome Browser custom track) |
| Alignm length: | 540 |
| Alignm identity: | 398 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 106 |
| Conread position: | 64-579 |
| Cow position: | chr23:31446427-31446953 (view UCSC Genome Browser custom track) |
| Alignm length: | 530 |
| Alignm identity: | 381 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 67 |
| Conread position: | 76-231 |
| Cow position: | chr23:6469650-6469495 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 116 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 31, 72 |
| Conread position: | 84-406 |
| Cow position: | chr23:8980856-8980525 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 64 |
| Conread position: | 118-570 |
| Cow position: | chr23:2313570-2313110 (view UCSC Genome Browser custom track) |
| Alignm length: | 466 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 135, 29 |
| Conread position: | 164-435 |
| Cow position: | chr23:7750105-7750388 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 192 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 79, 263 |
| Conread position: | 168-554 |
| Cow position: | chr23:4888397-4888788 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 233 |
| Conread position: | 223-579 |
| Cow position: | chr23:20156459-20156079 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 284 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 284 |
| Conread position: | 231-561 |
| Cow position: | chr23:14974779-14974443 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 260 |
| Conread position: | 232-573 |
| Cow position: | chr23:14965961-14965620 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 13 |
| Conread position: | 232-579 |
| Cow position: | chr23:2524412-2524059 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 276 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 5, 257 |
| Conread position: | 251-579 |
| Cow position: | chr23:38578095-38578415 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 225 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 18, 156 |
| Conread position: | 271-586 |
| Cow position: | chr23:31591983-31591657 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 99 |
| Conread position: | 305-586 |
| Cow position: | chr23:29474691-29474412 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 211 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 72 |
| Conread position: | 328-579 |
| Cow position: | chr23:1327571-1327336 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 183 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 78, 149 |
| Conread position: | 328-579 |
| Cow position: | chr23:25684165-25683923 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 199 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 53 |
| Conread position: | 332-574 |
| Cow position: | chr23:2757487-2757727 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 187 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 149, 0 |
| Conread position: | 369-573 |
| Cow position: | chr23:2716320-2716520 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 110, 0 |
| Conread position: | 369-579 |
| Cow position: | chr23:2763831-2763629 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 143 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 100, 0 |
| Conread position: | 384-579 |
| Cow position: | chr23:2574481-2574674 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 102, 0 |
| Conread position: | 384-586 |
| Cow position: | chr23:31595292-31595091 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 55, 103 |
| Conread position: | 389-568 |
| Cow position: | chr23:31651604-31651433 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 37, 79 |
Show alignments to all cow chromosomes.