Cow genome map


           Conread name:
           LyN1-MLN01F050049
        

               Conread position:
               1-200
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               150
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               43, 148
               

               Conread position:
               1-229
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               178
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               27, 152
               

               Conread position:
               1-279
               

               Cow position:
               
               

               Alignm length:
               291
               

               Alignm identity:
               228
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               105, 147
               

               Conread position:
               1-314
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               221
               

               Alignm E-value:
               8e-40
               

               Alignm gaps (pig, cow):
               266, 103
               

               Conread position:
               1-550
               

               Cow position:
               
               

               Alignm length:
               556
               

               Alignm identity:
               422
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               106, 147
               

               Conread position:
               1-550
               

               Cow position:
               
               

               Alignm length:
               557
               

               Alignm identity:
               355
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               11, 44
               

               Conread position:
               1-563
               

               Cow position:
               
               

               Alignm length:
               572
               

               Alignm identity:
               423
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               268, 129
               

               Conread position:
               1-568
               

               Cow position:
               
               

               Alignm length:
               595
               

               Alignm identity:
               400
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 197
               

               Conread position:
               1-573
               

               Cow position:
               
               

               Alignm length:
               595
               

               Alignm identity:
               437
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               105, 8
               

               Conread position:
               1-573
               

               Cow position:
               
               

               Alignm length:
               586
               

               Alignm identity:
               426
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               106, 153
               

               Conread position:
               1-573
               

               Cow position:
               
               

               Alignm length:
               579
               

               Alignm identity:
               391
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               235, 106
               

               Conread position:
               2-568
               

               Cow position:
               
               

               Alignm length:
               583
               

               Alignm identity:
               401
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 108
               

               Conread position:
               2-579
               

               Cow position:
               
               

               Alignm length:
               602
               

               Alignm identity:
               438
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 147
               

               Conread position:
               3-452
               

               Cow position:
               
               

               Alignm length:
               458
               

               Alignm identity:
               328
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 49
               

               Conread position:
               3-567
               

               Cow position:
               
               

               Alignm length:
               581
               

               Alignm identity:
               426
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 84
               

               Conread position:
               3-571
               

               Cow position:
               
               

               Alignm length:
               586
               

               Alignm identity:
               379
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 127
               

               Conread position:
               3-579
               

               Cow position:
               
               

               Alignm length:
               591
               

               Alignm identity:
               435
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 152
               

               Conread position:
               6-411
               

               Cow position:
               
               

               Alignm length:
               419
               

               Alignm identity:
               301
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 64
               

               Conread position:
               9-279
               

               Cow position:
               
               

               Alignm length:
               274
               

               Alignm identity:
               193
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               97, 71
               

               Conread position:
               9-579
               

               Cow position:
               
               

               Alignm length:
               582
               

               Alignm identity:
               399
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               210, 87
               

               Conread position:
               11-566
               

               Cow position:
               
               

               Alignm length:
               567
               

               Alignm identity:
               402
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               96, 137
               

               Conread position:
               16-348
               

               Cow position:
               
               

               Alignm length:
               339
               

               Alignm identity:
               234
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               91, 42
               

               Conread position:
               17-263
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               185
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               72, 113
               

               Conread position:
               17-279
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               187
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               90, 114
               

               Conread position:
               17-390
               

               Cow position:
               
               

               Alignm length:
               384
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               90, 138
               

               Conread position:
               17-512
               

               Cow position:
               
               

               Alignm length:
               505
               

               Alignm identity:
               360
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               90, 131
               

               Conread position:
               17-568
               

               Cow position:
               
               

               Alignm length:
               563
               

               Alignm identity:
               390
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               88, 139
               

               Conread position:
               17-574
               

               Cow position:
               
               

               Alignm length:
               573
               

               Alignm identity:
               404
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               90, 131
               

               Conread position:
               17-579
               

               Cow position:
               
               

               Alignm length:
               574
               

               Alignm identity:
               417
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               90, 131
               

               Conread position:
               17-580
               

               Cow position:
               
               

               Alignm length:
               596
               

               Alignm identity:
               418
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 36
               

               Conread position:
               18-579
               

               Cow position:
               
               

               Alignm length:
               576
               

               Alignm identity:
               413
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               89, 130
               

               Conread position:
               21-569
               

               Cow position:
               
               

               Alignm length:
               563
               

               Alignm identity:
               426
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               86, 133
               

               Conread position:
               21-574
               

               Cow position:
               
               

               Alignm length:
               561
               

               Alignm identity:
               410
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               248, 132
               

               Conread position:
               21-574
               

               Cow position:
               
               

               Alignm length:
               567
               

               Alignm identity:
               406
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               86, 103
               

               Conread position:
               23-280
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               193
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               84, 122
               

               Conread position:
               23-579
               

               Cow position:
               
               

               Alignm length:
               570
               

               Alignm identity:
               384
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               5, 33
               

               Conread position:
               24-579
               

               Cow position:
               
               

               Alignm length:
               571
               

               Alignm identity:
               418
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 125
               

               Conread position:
               27-563
               

               Cow position:
               
               

               Alignm length:
               549
               

               Alignm identity:
               386
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               80, 100
               

               Conread position:
               27-566
               

               Cow position:
               
               

               Alignm length:
               548
               

               Alignm identity:
               362
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               79, 19
               

               Conread position:
               27-569
               

               Cow position:
               
               

               Alignm length:
               557
               

               Alignm identity:
               400
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               80, 116
               

               Conread position:
               27-574
               

               Cow position:
               
               

               Alignm length:
               564
               

               Alignm identity:
               407
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 122
               

               Conread position:
               27-579
               

               Cow position:
               
               

               Alignm length:
               570
               

               Alignm identity:
               414
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               80, 124
               

               Conread position:
               27-579
               

               Cow position:
               
               

               Alignm length:
               564
               

               Alignm identity:
               367
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               80, 127
               

               Conread position:
               27-579
               

               Cow position:
               
               

               Alignm length:
               575
               

               Alignm identity:
               403
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               81, 121
               

               Conread position:
               29-568
               

               Cow position:
               
               

               Alignm length:
               549
               

               Alignm identity:
               358
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               78, 100
               

               Conread position:
               30-199
               

               Cow position:
               
               

               Alignm length:
               171
               

               Alignm identity:
               132
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               77, 118
               

               Conread position:
               30-525
               

               Cow position:
               
               

               Alignm length:
               509
               

               Alignm identity:
               377
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 118
               

               Conread position:
               30-579
               

               Cow position:
               
               

               Alignm length:
               579
               

               Alignm identity:
               427
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 47
               

               Conread position:
               31-573
               

               Cow position:
               
               

               Alignm length:
               561
               

               Alignm identity:
               410
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 34
               

               Conread position:
               33-579
               

               Cow position:
               
               

               Alignm length:
               561
               

               Alignm identity:
               399
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               75, 115
               

               Conread position:
               34-510
               

               Cow position:
               
               

               Alignm length:
               492
               

               Alignm identity:
               300
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               74, 93
               

               Conread position:
               36-519
               

               Cow position:
               
               

               Alignm length:
               497
               

               Alignm identity:
               352
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 91
               

               Conread position:
               41-524
               

               Cow position:
               
               

               Alignm length:
               494
               

               Alignm identity:
               363
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               66, 105
               

               Conread position:
               41-563
               

               Cow position:
               
               

               Alignm length:
               537
               

               Alignm identity:
               396
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               66, 107
               

               Conread position:
               50-568
               

               Cow position:
               
               

               Alignm length:
               531
               

               Alignm identity:
               333
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               56, 272
               

               Conread position:
               51-457
               

               Cow position:
               
               

               Alignm length:
               420
               

               Alignm identity:
               306
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 225
               

               Conread position:
               84-568
               

               Cow position:
               
               

               Alignm length:
               498
               

               Alignm identity:
               334
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               23, 34
               

               Conread position:
               105-514
               

               Cow position:
               
               

               Alignm length:
               423
               

               Alignm identity:
               301
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               148, 42
               

               Conread position:
               105-579
               

               Cow position:
               
               

               Alignm length:
               488
               

               Alignm identity:
               352
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               148, 42
               

               Conread position:
               130-572
               

               Cow position:
               
               

               Alignm length:
               476
               

               Alignm identity:
               333
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 18
               

               Conread position:
               198-579
               

               Cow position:
               
               

               Alignm length:
               394
               

               Alignm identity:
               278
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 15
               

               Conread position:
               223-579
               

               Cow position:
               
               

               Alignm length:
               370
               

               Alignm identity:
               286
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 271
               

               Conread position:
               232-579
               

               Cow position:
               
               

               Alignm length:
               375
               

               Alignm identity:
               265
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               37, 11
               

               Conread position:
               235-574
               

               Cow position:
               
               

               Alignm length:
               349
               

               Alignm identity:
               263
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 8
               

               Conread position:
               245-579
               

               Cow position:
               
               

               Alignm length:
               345
               

               Alignm identity:
               248
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 206
               

               Conread position:
               276-586
               

               Cow position:
               
               

               Alignm length:
               320
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 213
               

               Conread position:
               313-559
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               183
               

               Alignm E-value:
               8e-40
               

               Alignm gaps (pig, cow):
               20, 60
               

               Conread position:
               335-573
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               180
               

               Alignm E-value:
               8e-40
               

               Alignm gaps (pig, cow):
               99, 23
               

               Conread position:
               397-550
               

               Cow position:
               
               

               Alignm length:
               156
               

               Alignm identity:
               117
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               18, 59
               

               Conread position:
               401-569
               

               Cow position:
               
               

               Alignm length:
               169
               

               Alignm identity:
               132
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               85, 0
               

               Conread position:
               405-579
               

               Cow position:
               
               

               Alignm length:
               175
               

               Alignm identity:
               128
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               81, 0
               
Show alignments to all cow chromosomes.