Cow genome map
| Conread name: | LyN1-MLN01F050049 |
| Conread position: | 1-355 |
| Cow position: | chr25:17563313-17562962 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 62 |
| Conread position: | 1-537 |
| Cow position: | chr25:18092611-18093157 (view UCSC Genome Browser custom track) |
| Alignm length: | 554 |
| Alignm identity: | 401 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 85 |
| Conread position: | 1-568 |
| Cow position: | chr25:11933933-11933361 (view UCSC Genome Browser custom track) |
| Alignm length: | 589 |
| Alignm identity: | 408 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 135 |
| Conread position: | 1-574 |
| Cow position: | chr25:13780626-13781205 (view UCSC Genome Browser custom track) |
| Alignm length: | 584 |
| Alignm identity: | 441 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 155 |
| Conread position: | 2-573 |
| Cow position: | chr25:18255762-18255193 (view UCSC Genome Browser custom track) |
| Alignm length: | 583 |
| Alignm identity: | 370 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 105, 34 |
| Conread position: | 3-566 |
| Cow position: | chr25:18276226-18275666 (view UCSC Genome Browser custom track) |
| Alignm length: | 578 |
| Alignm identity: | 415 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 103, 59 |
| Conread position: | 5-528 |
| Cow position: | chr25:17561000-17560476 (view UCSC Genome Browser custom track) |
| Alignm length: | 547 |
| Alignm identity: | 390 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 62 |
| Conread position: | 6-251 |
| Cow position: | chr25:18302371-18302619 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 180 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 100, 109 |
| Conread position: | 6-402 |
| Cow position: | chr25:18411684-18411283 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 298 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 103, 170 |
| Conread position: | 9-201 |
| Cow position: | chr25:18172945-18173128 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 148 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 98, 42 |
| Conread position: | 9-579 |
| Cow position: | chr25:18060990-18060420 (view UCSC Genome Browser custom track) |
| Alignm length: | 593 |
| Alignm identity: | 414 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 18 |
| Conread position: | 17-183 |
| Cow position: | chr25:32979150-32978984 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 120 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 87, 131 |
| Conread position: | 17-568 |
| Cow position: | chr25:20493970-20494518 (view UCSC Genome Browser custom track) |
| Alignm length: | 567 |
| Alignm identity: | 369 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 90, 30 |
| Conread position: | 17-579 |
| Cow position: | chr25:17589935-17589374 (view UCSC Genome Browser custom track) |
| Alignm length: | 578 |
| Alignm identity: | 404 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 131 |
| Conread position: | 17-579 |
| Cow position: | chr25:19916697-19917264 (view UCSC Genome Browser custom track) |
| Alignm length: | 577 |
| Alignm identity: | 403 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 93, 112 |
| Conread position: | 17-579 |
| Cow position: | chr25:20777290-20776717 (view UCSC Genome Browser custom track) |
| Alignm length: | 578 |
| Alignm identity: | 401 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 91, 391 |
| Conread position: | 17-579 |
| Cow position: | chr25:26921839-26922397 (view UCSC Genome Browser custom track) |
| Alignm length: | 577 |
| Alignm identity: | 398 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 146 |
| Conread position: | 17-579 |
| Cow position: | chr25:32579591-32580146 (view UCSC Genome Browser custom track) |
| Alignm length: | 575 |
| Alignm identity: | 405 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 110 |
| Conread position: | 17-579 |
| Cow position: | chr25:35362811-35362249 (view UCSC Genome Browser custom track) |
| Alignm length: | 573 |
| Alignm identity: | 400 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 130 |
| Conread position: | 21-210 |
| Cow position: | chr25:34014733-34014545 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 145 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 85, 91 |
| Conread position: | 21-572 |
| Cow position: | chr25:8674539-8675089 (view UCSC Genome Browser custom track) |
| Alignm length: | 566 |
| Alignm identity: | 417 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 86, 103 |
| Conread position: | 21-573 |
| Cow position: | chr25:25506262-25506824 (view UCSC Genome Browser custom track) |
| Alignm length: | 567 |
| Alignm identity: | 432 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 86, 133 |
| Conread position: | 21-573 |
| Cow position: | chr25:26278889-26279431 (view UCSC Genome Browser custom track) |
| Alignm length: | 566 |
| Alignm identity: | 411 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 231, 37 |
| Conread position: | 21-579 |
| Cow position: | chr25:18890402-18889836 (view UCSC Genome Browser custom track) |
| Alignm length: | 573 |
| Alignm identity: | 435 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 86, 75 |
| Conread position: | 21-579 |
| Cow position: | chr25:22147108-22147674 (view UCSC Genome Browser custom track) |
| Alignm length: | 573 |
| Alignm identity: | 431 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 86, 52 |
| Conread position: | 23-439 |
| Cow position: | chr25:34347377-34346949 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 131 |
| Conread position: | 23-554 |
| Cow position: | chr25:33991445-33990904 (view UCSC Genome Browser custom track) |
| Alignm length: | 552 |
| Alignm identity: | 381 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 45 |
| Conread position: | 23-574 |
| Cow position: | chr25:18028014-18027450 (view UCSC Genome Browser custom track) |
| Alignm length: | 569 |
| Alignm identity: | 413 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 85, 133 |
| Conread position: | 23-589 |
| Cow position: | chr25:14015791-14016354 (view UCSC Genome Browser custom track) |
| Alignm length: | 575 |
| Alignm identity: | 426 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 85, 125 |
| Conread position: | 26-563 |
| Cow position: | chr25:19288728-19288175 (view UCSC Genome Browser custom track) |
| Alignm length: | 560 |
| Alignm identity: | 359 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 9, 102 |
| Conread position: | 27-456 |
| Cow position: | chr25:26866841-26867272 (view UCSC Genome Browser custom track) |
| Alignm length: | 445 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 80, 356 |
| Conread position: | 27-579 |
| Cow position: | chr25:20629195-20629751 (view UCSC Genome Browser custom track) |
| Alignm length: | 567 |
| Alignm identity: | 413 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 80, 127 |
| Conread position: | 30-579 |
| Cow position: | chr25:11375725-11375168 (view UCSC Genome Browser custom track) |
| Alignm length: | 563 |
| Alignm identity: | 423 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 118 |
| Conread position: | 30-587 |
| Cow position: | chr25:17469072-17468510 (view UCSC Genome Browser custom track) |
| Alignm length: | 569 |
| Alignm identity: | 417 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 134 |
| Conread position: | 36-390 |
| Cow position: | chr25:24171662-24172021 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 246 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 71, 92 |
| Conread position: | 47-579 |
| Cow position: | chr25:12759960-12759417 (view UCSC Genome Browser custom track) |
| Alignm length: | 553 |
| Alignm identity: | 371 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 112 |
| Conread position: | 49-269 |
| Cow position: | chr25:12943797-12943576 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 157 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 58, 100 |
| Conread position: | 53-579 |
| Cow position: | chr25:34656801-34656266 (view UCSC Genome Browser custom track) |
| Alignm length: | 541 |
| Alignm identity: | 398 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 95 |
| Conread position: | 147-579 |
| Cow position: | chr25:36240284-36240736 (view UCSC Genome Browser custom track) |
| Alignm length: | 455 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 362 |
| Conread position: | 235-487 |
| Cow position: | chr25:18173191-18173454 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 196 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 7, 37 |
| Conread position: | 261-573 |
| Cow position: | chr25:12942844-12942526 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 228 |
| Conread position: | 309-574 |
| Cow position: | chr25:33665958-33665698 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 206 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 24, 87 |
| Conread position: | 315-579 |
| Cow position: | chr25:23345423-23345157 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 192 |
| Alignm E-value: | 8.99998e-41 |
| Alignm gaps (pig, cow): | 17, 174 |
| Conread position: | 328-579 |
| Cow position: | chr25:27022635-27022386 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 189 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 41 |
| Conread position: | 368-579 |
| Cow position: | chr25:18195127-18194918 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 166 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 0 |
| Conread position: | 368-579 |
| Cow position: | chr25:18421640-18421847 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 158 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 58, 47 |
| Conread position: | 424-606 |
| Cow position: | chr25:9544093-9544272 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 132 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 160, 13 |
| Conread position: | 426-577 |
| Cow position: | chr25:18303430-18303579 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 117 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 60, 0 |
Show alignments to all cow chromosomes.