Cow genome map


           Conread name:
           LyN1-MLN01F050049
        

               Conread position:
               1-355
               

               Cow position:
               
               

               Alignm length:
               367
               

               Alignm identity:
               265
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 62
               

               Conread position:
               1-537
               

               Cow position:
               
               

               Alignm length:
               554
               

               Alignm identity:
               401
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 85
               

               Conread position:
               1-568
               

               Cow position:
               
               

               Alignm length:
               589
               

               Alignm identity:
               408
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 135
               

               Conread position:
               1-574
               

               Cow position:
               
               

               Alignm length:
               584
               

               Alignm identity:
               441
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 155
               

               Conread position:
               2-573
               

               Cow position:
               
               

               Alignm length:
               583
               

               Alignm identity:
               370
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               105, 34
               

               Conread position:
               3-566
               

               Cow position:
               
               

               Alignm length:
               578
               

               Alignm identity:
               415
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               103, 59
               

               Conread position:
               5-528
               

               Cow position:
               
               

               Alignm length:
               547
               

               Alignm identity:
               390
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 62
               

               Conread position:
               6-251
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               180
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               100, 109
               

               Conread position:
               6-402
               

               Cow position:
               
               

               Alignm length:
               415
               

               Alignm identity:
               298
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               103, 170
               

               Conread position:
               9-201
               

               Cow position:
               
               

               Alignm length:
               194
               

               Alignm identity:
               148
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               98, 42
               

               Conread position:
               9-579
               

               Cow position:
               
               

               Alignm length:
               593
               

               Alignm identity:
               414
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               99, 18
               

               Conread position:
               17-183
               

               Cow position:
               
               

               Alignm length:
               168
               

               Alignm identity:
               120
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               87, 131
               

               Conread position:
               17-568
               

               Cow position:
               
               

               Alignm length:
               567
               

               Alignm identity:
               369
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               90, 30
               

               Conread position:
               17-579
               

               Cow position:
               
               

               Alignm length:
               578
               

               Alignm identity:
               404
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               90, 131
               

               Conread position:
               17-579
               

               Cow position:
               
               

               Alignm length:
               577
               

               Alignm identity:
               403
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 112
               

               Conread position:
               17-579
               

               Cow position:
               
               

               Alignm length:
               578
               

               Alignm identity:
               401
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               91, 391
               

               Conread position:
               17-579
               

               Cow position:
               
               

               Alignm length:
               577
               

               Alignm identity:
               398
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               90, 146
               

               Conread position:
               17-579
               

               Cow position:
               
               

               Alignm length:
               575
               

               Alignm identity:
               405
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               90, 110
               

               Conread position:
               17-579
               

               Cow position:
               
               

               Alignm length:
               573
               

               Alignm identity:
               400
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               90, 130
               

               Conread position:
               21-210
               

               Cow position:
               
               

               Alignm length:
               191
               

               Alignm identity:
               145
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               85, 91
               

               Conread position:
               21-572
               

               Cow position:
               
               

               Alignm length:
               566
               

               Alignm identity:
               417
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               86, 103
               

               Conread position:
               21-573
               

               Cow position:
               
               

               Alignm length:
               567
               

               Alignm identity:
               432
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               86, 133
               

               Conread position:
               21-573
               

               Cow position:
               
               

               Alignm length:
               566
               

               Alignm identity:
               411
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               231, 37
               

               Conread position:
               21-579
               

               Cow position:
               
               

               Alignm length:
               573
               

               Alignm identity:
               435
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               86, 75
               

               Conread position:
               21-579
               

               Cow position:
               
               

               Alignm length:
               573
               

               Alignm identity:
               431
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               86, 52
               

               Conread position:
               23-439
               

               Cow position:
               
               

               Alignm length:
               431
               

               Alignm identity:
               305
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               84, 131
               

               Conread position:
               23-554
               

               Cow position:
               
               

               Alignm length:
               552
               

               Alignm identity:
               381
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 45
               

               Conread position:
               23-574
               

               Cow position:
               
               

               Alignm length:
               569
               

               Alignm identity:
               413
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               85, 133
               

               Conread position:
               23-589
               

               Cow position:
               
               

               Alignm length:
               575
               

               Alignm identity:
               426
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               85, 125
               

               Conread position:
               26-563
               

               Cow position:
               
               

               Alignm length:
               560
               

               Alignm identity:
               359
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               9, 102
               

               Conread position:
               27-456
               

               Cow position:
               
               

               Alignm length:
               445
               

               Alignm identity:
               309
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               80, 356
               

               Conread position:
               27-579
               

               Cow position:
               
               

               Alignm length:
               567
               

               Alignm identity:
               413
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               80, 127
               

               Conread position:
               30-579
               

               Cow position:
               
               

               Alignm length:
               563
               

               Alignm identity:
               423
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 118
               

               Conread position:
               30-587
               

               Cow position:
               
               

               Alignm length:
               569
               

               Alignm identity:
               417
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 134
               

               Conread position:
               36-390
               

               Cow position:
               
               

               Alignm length:
               369
               

               Alignm identity:
               246
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               71, 92
               

               Conread position:
               47-579
               

               Cow position:
               
               

               Alignm length:
               553
               

               Alignm identity:
               371
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 112
               

               Conread position:
               49-269
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               157
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               58, 100
               

               Conread position:
               53-579
               

               Cow position:
               
               

               Alignm length:
               541
               

               Alignm identity:
               398
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 95
               

               Conread position:
               147-579
               

               Cow position:
               
               

               Alignm length:
               455
               

               Alignm identity:
               322
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 362
               

               Conread position:
               235-487
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               196
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               7, 37
               

               Conread position:
               261-573
               

               Cow position:
               
               

               Alignm length:
               321
               

               Alignm identity:
               236
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 228
               

               Conread position:
               309-574
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               206
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               24, 87
               

               Conread position:
               315-579
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               192
               

               Alignm E-value:
               8.99998e-41
               

               Alignm gaps (pig, cow):
               17, 174
               

               Conread position:
               328-579
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               189
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 41
               

               Conread position:
               368-579
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               166
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               113, 0
               

               Conread position:
               368-579
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               158
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               58, 47
               

               Conread position:
               424-606
               

               Cow position:
               
               

               Alignm length:
               185
               

               Alignm identity:
               132
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               160, 13
               

               Conread position:
               426-577
               

               Cow position:
               
               

               Alignm length:
               152
               

               Alignm identity:
               117
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               60, 0
               
Show alignments to all cow chromosomes.