Cow genome map


           Conread name:
           LyN1-MLN01F050049
        

               Conread position:
               1-189
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               142
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               106, 67
               

               Conread position:
               1-387
               

               Cow position:
               
               

               Alignm length:
               403
               

               Alignm identity:
               301
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 157
               

               Conread position:
               1-428
               

               Cow position:
               
               

               Alignm length:
               443
               

               Alignm identity:
               327
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 156
               

               Conread position:
               1-431
               

               Cow position:
               
               

               Alignm length:
               448
               

               Alignm identity:
               297
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               11, 132
               

               Conread position:
               1-557
               

               Cow position:
               
               

               Alignm length:
               571
               

               Alignm identity:
               407
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               106, 20
               

               Conread position:
               1-573
               

               Cow position:
               
               

               Alignm length:
               583
               

               Alignm identity:
               440
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               106, 147
               

               Conread position:
               1-573
               

               Cow position:
               
               

               Alignm length:
               591
               

               Alignm identity:
               431
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 157
               

               Conread position:
               1-573
               

               Cow position:
               
               

               Alignm length:
               591
               

               Alignm identity:
               441
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 157
               

               Conread position:
               1-579
               

               Cow position:
               
               

               Alignm length:
               592
               

               Alignm identity:
               435
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               106, 153
               

               Conread position:
               1-579
               

               Cow position:
               
               

               Alignm length:
               602
               

               Alignm identity:
               419
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 88
               

               Conread position:
               1-586
               

               Cow position:
               
               

               Alignm length:
               599
               

               Alignm identity:
               428
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               106, 25
               

               Conread position:
               2-295
               

               Cow position:
               
               

               Alignm length:
               296
               

               Alignm identity:
               198
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               124, 105
               

               Conread position:
               2-355
               

               Cow position:
               
               

               Alignm length:
               369
               

               Alignm identity:
               247
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               23, 97
               

               Conread position:
               2-358
               

               Cow position:
               
               

               Alignm length:
               367
               

               Alignm identity:
               266
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               105, 146
               

               Conread position:
               2-579
               

               Cow position:
               
               

               Alignm length:
               591
               

               Alignm identity:
               427
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 36
               

               Conread position:
               4-579
               

               Cow position:
               
               

               Alignm length:
               596
               

               Alignm identity:
               439
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               103, 13
               

               Conread position:
               6-173
               

               Cow position:
               
               

               Alignm length:
               169
               

               Alignm identity:
               132
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               100, 142
               

               Conread position:
               6-189
               

               Cow position:
               
               

               Alignm length:
               185
               

               Alignm identity:
               142
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               100, 143
               

               Conread position:
               6-329
               

               Cow position:
               
               

               Alignm length:
               337
               

               Alignm identity:
               249
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               6, 144
               

               Conread position:
               6-566
               

               Cow position:
               
               

               Alignm length:
               571
               

               Alignm identity:
               402
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               100, 11
               

               Conread position:
               6-569
               

               Cow position:
               
               

               Alignm length:
               570
               

               Alignm identity:
               417
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               6, 149
               

               Conread position:
               7-573
               

               Cow position:
               
               

               Alignm length:
               576
               

               Alignm identity:
               427
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               101, 20
               

               Conread position:
               9-579
               

               Cow position:
               
               

               Alignm length:
               584
               

               Alignm identity:
               456
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               98, 275
               

               Conread position:
               16-210
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               149
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               17-202
               

               Cow position:
               
               

               Alignm length:
               187
               

               Alignm identity:
               137
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               90, 131
               

               Conread position:
               17-559
               

               Cow position:
               
               

               Alignm length:
               557
               

               Alignm identity:
               398
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               90, 131
               

               Conread position:
               17-568
               

               Cow position:
               
               

               Alignm length:
               566
               

               Alignm identity:
               400
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               90, 110
               

               Conread position:
               17-573
               

               Cow position:
               
               

               Alignm length:
               571
               

               Alignm identity:
               397
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               90, 21
               

               Conread position:
               17-579
               

               Cow position:
               
               

               Alignm length:
               576
               

               Alignm identity:
               392
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               90, 147
               

               Conread position:
               18-579
               

               Cow position:
               
               

               Alignm length:
               566
               

               Alignm identity:
               441
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               89, 75
               

               Conread position:
               21-174
               

               Cow position:
               
               

               Alignm length:
               155
               

               Alignm identity:
               119
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               84, 128
               

               Conread position:
               21-183
               

               Cow position:
               
               

               Alignm length:
               164
               

               Alignm identity:
               123
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               81, 128
               

               Conread position:
               21-183
               

               Cow position:
               
               

               Alignm length:
               164
               

               Alignm identity:
               127
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               85, 128
               

               Conread position:
               21-189
               

               Cow position:
               
               

               Alignm length:
               170
               

               Alignm identity:
               131
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               86, 0
               

               Conread position:
               21-235
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               160
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               85, 39
               

               Conread position:
               21-387
               

               Cow position:
               
               

               Alignm length:
               377
               

               Alignm identity:
               283
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               85, 128
               

               Conread position:
               21-537
               

               Cow position:
               
               

               Alignm length:
               532
               

               Alignm identity:
               394
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               86, 133
               

               Conread position:
               21-563
               

               Cow position:
               
               

               Alignm length:
               557
               

               Alignm identity:
               406
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               86, 128
               

               Conread position:
               21-567
               

               Cow position:
               
               

               Alignm length:
               562
               

               Alignm identity:
               416
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               86, 471
               

               Conread position:
               21-573
               

               Cow position:
               
               

               Alignm length:
               566
               

               Alignm identity:
               420
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               86, 133
               

               Conread position:
               21-573
               

               Cow position:
               
               

               Alignm length:
               567
               

               Alignm identity:
               418
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               86, 133
               

               Conread position:
               21-573
               

               Cow position:
               
               

               Alignm length:
               567
               

               Alignm identity:
               425
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               86, 133
               

               Conread position:
               21-579
               

               Cow position:
               
               

               Alignm length:
               573
               

               Alignm identity:
               428
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 129
               

               Conread position:
               21-579
               

               Cow position:
               
               

               Alignm length:
               573
               

               Alignm identity:
               422
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               85, 110
               

               Conread position:
               21-579
               

               Cow position:
               
               

               Alignm length:
               571
               

               Alignm identity:
               434
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               86, 110
               

               Conread position:
               21-579
               

               Cow position:
               
               

               Alignm length:
               572
               

               Alignm identity:
               434
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               86, 133
               

               Conread position:
               21-579
               

               Cow position:
               
               

               Alignm length:
               564
               

               Alignm identity:
               400
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               85, 128
               

               Conread position:
               23-579
               

               Cow position:
               
               

               Alignm length:
               572
               

               Alignm identity:
               421
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               84, 28
               

               Conread position:
               23-579
               

               Cow position:
               
               

               Alignm length:
               572
               

               Alignm identity:
               427
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               85, 124
               

               Conread position:
               27-579
               

               Cow position:
               
               

               Alignm length:
               567
               

               Alignm identity:
               407
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               80, 121
               

               Conread position:
               27-579
               

               Cow position:
               
               

               Alignm length:
               568
               

               Alignm identity:
               413
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               80, 121
               

               Conread position:
               30-501
               

               Cow position:
               
               

               Alignm length:
               497
               

               Alignm identity:
               361
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               77, 127
               

               Conread position:
               31-543
               

               Cow position:
               
               

               Alignm length:
               525
               

               Alignm identity:
               335
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               75, 117
               

               Conread position:
               32-320
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               195
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               34, 22
               

               Conread position:
               36-273
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               177
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               71, 188
               

               Conread position:
               39-573
               

               Cow position:
               
               

               Alignm length:
               549
               

               Alignm identity:
               408
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 115
               

               Conread position:
               40-448
               

               Cow position:
               
               

               Alignm length:
               429
               

               Alignm identity:
               310
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 184
               

               Conread position:
               41-189
               

               Cow position:
               
               

               Alignm length:
               150
               

               Alignm identity:
               116
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               66, 107
               

               Conread position:
               41-466
               

               Cow position:
               
               

               Alignm length:
               436
               

               Alignm identity:
               278
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               93, 61
               

               Conread position:
               64-579
               

               Cow position:
               
               

               Alignm length:
               533
               

               Alignm identity:
               383
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 63
               

               Conread position:
               71-579
               

               Cow position:
               
               

               Alignm length:
               528
               

               Alignm identity:
               383
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 60
               

               Conread position:
               81-319
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               176
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               26, 59
               

               Conread position:
               82-573
               

               Cow position:
               
               

               Alignm length:
               507
               

               Alignm identity:
               383
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 72
               

               Conread position:
               107-579
               

               Cow position:
               
               

               Alignm length:
               478
               

               Alignm identity:
               355
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               142, 40
               

               Conread position:
               168-573
               

               Cow position:
               
               

               Alignm length:
               415
               

               Alignm identity:
               304
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               84, 322
               

               Conread position:
               178-540
               

               Cow position:
               
               

               Alignm length:
               380
               

               Alignm identity:
               267
               

               Alignm E-value:
               8.99634e-43
               

               Alignm gaps (pig, cow):
               67, 239
               

               Conread position:
               179-386
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               165
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               179-579
               

               Cow position:
               
               

               Alignm length:
               414
               

               Alignm identity:
               300
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 313
               

               Conread position:
               180-401
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               173
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               59, 106
               

               Conread position:
               206-568
               

               Cow position:
               
               

               Alignm length:
               378
               

               Alignm identity:
               276
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 57
               

               Conread position:
               235-568
               

               Cow position:
               
               

               Alignm length:
               335
               

               Alignm identity:
               252
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 10
               

               Conread position:
               235-579
               

               Cow position:
               
               

               Alignm length:
               354
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 10
               

               Conread position:
               238-579
               

               Cow position:
               
               

               Alignm length:
               353
               

               Alignm identity:
               224
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               33, 7
               

               Conread position:
               241-527
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               199
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               25, 173
               

               Conread position:
               248-579
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               250
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 23
               

               Conread position:
               253-420
               

               Cow position:
               
               

               Alignm length:
               176
               

               Alignm identity:
               129
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               265-568
               

               Cow position:
               
               

               Alignm length:
               323
               

               Alignm identity:
               236
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 235
               

               Conread position:
               283-563
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               219
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 163
               

               Conread position:
               299-579
               

               Cow position:
               
               

               Alignm length:
               283
               

               Alignm identity:
               204
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 184
               

               Conread position:
               309-484
               

               Cow position:
               
               

               Alignm length:
               178
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               24, 134
               

               Conread position:
               370-579
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               163
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               5, 0
               

               Conread position:
               377-569
               

               Cow position:
               
               

               Alignm length:
               193
               

               Alignm identity:
               149
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               104, 0
               

               Conread position:
               377-573
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               152
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               167, 89
               

               Conread position:
               407-573
               

               Cow position:
               
               

               Alignm length:
               168
               

               Alignm identity:
               127
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               19, 80
               

               Conread position:
               431-568
               

               Cow position:
               
               

               Alignm length:
               138
               

               Alignm identity:
               111
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               431-579
               

               Cow position:
               
               

               Alignm length:
               149
               

               Alignm identity:
               118
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               432-582
               

               Cow position:
               
               

               Alignm length:
               151
               

               Alignm identity:
               122
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               54, 0
               
Show alignments to all cow chromosomes.