Cow genome map
Conread name: | LyN1-MLN01F050049 |
Conread position: | 1-189 |
Cow position: | chr28:2990364-2990184 (view UCSC Genome Browser custom track) |
Alignm length: | 192 |
Alignm identity: | 142 |
Alignm E-value: | 4e-25 |
Alignm gaps (pig, cow): | 106, 67 |
Conread position: | 1-387 |
Cow position: | chr28:1168574-1168174 (view UCSC Genome Browser custom track) |
Alignm length: | 403 |
Alignm identity: | 301 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 27, 157 |
Conread position: | 1-428 |
Cow position: | chr28:29819161-29819602 (view UCSC Genome Browser custom track) |
Alignm length: | 443 |
Alignm identity: | 327 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 12, 156 |
Conread position: | 1-431 |
Cow position: | chr28:22827654-22828085 (view UCSC Genome Browser custom track) |
Alignm length: | 448 |
Alignm identity: | 297 |
Alignm E-value: | 1e-36 |
Alignm gaps (pig, cow): | 11, 132 |
Conread position: | 1-557 |
Cow position: | chr28:26426671-26426117 (view UCSC Genome Browser custom track) |
Alignm length: | 571 |
Alignm identity: | 407 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 106, 20 |
Conread position: | 1-573 |
Cow position: | chr28:1387796-1387223 (view UCSC Genome Browser custom track) |
Alignm length: | 583 |
Alignm identity: | 440 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 106, 147 |
Conread position: | 1-573 |
Cow position: | chr28:14706081-14705494 (view UCSC Genome Browser custom track) |
Alignm length: | 591 |
Alignm identity: | 431 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 12, 157 |
Conread position: | 1-573 |
Cow position: | chr28:22261561-22260974 (view UCSC Genome Browser custom track) |
Alignm length: | 591 |
Alignm identity: | 441 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 27, 157 |
Conread position: | 1-579 |
Cow position: | chr28:10582391-10581804 (view UCSC Genome Browser custom track) |
Alignm length: | 592 |
Alignm identity: | 435 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 106, 153 |
Conread position: | 1-579 |
Cow position: | chr28:21325386-21325973 (view UCSC Genome Browser custom track) |
Alignm length: | 602 |
Alignm identity: | 419 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 8, 88 |
Conread position: | 1-586 |
Cow position: | chr28:5812307-5812881 (view UCSC Genome Browser custom track) |
Alignm length: | 599 |
Alignm identity: | 428 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 106, 25 |
Conread position: | 2-295 |
Cow position: | chr28:18181753-18181466 (view UCSC Genome Browser custom track) |
Alignm length: | 296 |
Alignm identity: | 198 |
Alignm E-value: | 3e-31 |
Alignm gaps (pig, cow): | 124, 105 |
Conread position: | 2-355 |
Cow position: | chr28:18089409-18089046 (view UCSC Genome Browser custom track) |
Alignm length: | 369 |
Alignm identity: | 247 |
Alignm E-value: | 9e-33 |
Alignm gaps (pig, cow): | 23, 97 |
Conread position: | 2-358 |
Cow position: | chr28:5796421-5796779 (view UCSC Genome Browser custom track) |
Alignm length: | 367 |
Alignm identity: | 266 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 105, 146 |
Conread position: | 2-579 |
Cow position: | chr28:10619505-10618932 (view UCSC Genome Browser custom track) |
Alignm length: | 591 |
Alignm identity: | 427 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 11, 36 |
Conread position: | 4-579 |
Cow position: | chr28:9155680-9155097 (view UCSC Genome Browser custom track) |
Alignm length: | 596 |
Alignm identity: | 439 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 103, 13 |
Conread position: | 6-173 |
Cow position: | chr28:24667213-24667380 (view UCSC Genome Browser custom track) |
Alignm length: | 169 |
Alignm identity: | 132 |
Alignm E-value: | 3e-34 |
Alignm gaps (pig, cow): | 100, 142 |
Conread position: | 6-189 |
Cow position: | chr28:5752561-5752378 (view UCSC Genome Browser custom track) |
Alignm length: | 185 |
Alignm identity: | 142 |
Alignm E-value: | 4e-36 |
Alignm gaps (pig, cow): | 100, 143 |
Conread position: | 6-329 |
Cow position: | chr28:13522325-13522660 (view UCSC Genome Browser custom track) |
Alignm length: | 337 |
Alignm identity: | 249 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 6, 144 |
Conread position: | 6-566 |
Cow position: | chr28:7816846-7817373 (view UCSC Genome Browser custom track) |
Alignm length: | 571 |
Alignm identity: | 402 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 100, 11 |
Conread position: | 6-569 |
Cow position: | chr28:12149920-12150483 (view UCSC Genome Browser custom track) |
Alignm length: | 570 |
Alignm identity: | 417 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 6, 149 |
Conread position: | 7-573 |
Cow position: | chr28:2591526-2592091 (view UCSC Genome Browser custom track) |
Alignm length: | 576 |
Alignm identity: | 427 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 101, 20 |
Conread position: | 9-579 |
Cow position: | chr28:8721842-8721265 (view UCSC Genome Browser custom track) |
Alignm length: | 584 |
Alignm identity: | 456 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 98, 275 |
Conread position: | 16-210 |
Cow position: | chr28:7790624-7790436 (view UCSC Genome Browser custom track) |
Alignm length: | 195 |
Alignm identity: | 149 |
Alignm E-value: | 4e-35 |
Alignm gaps (pig, cow): | 47, 0 |
Conread position: | 17-202 |
Cow position: | chr28:489100-489285 (view UCSC Genome Browser custom track) |
Alignm length: | 187 |
Alignm identity: | 137 |
Alignm E-value: | 2e-30 |
Alignm gaps (pig, cow): | 90, 131 |
Conread position: | 17-559 |
Cow position: | chr28:15950591-15951142 (view UCSC Genome Browser custom track) |
Alignm length: | 557 |
Alignm identity: | 398 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 90, 131 |
Conread position: | 17-568 |
Cow position: | chr28:15920849-15920294 (view UCSC Genome Browser custom track) |
Alignm length: | 566 |
Alignm identity: | 400 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 90, 110 |
Conread position: | 17-573 |
Cow position: | chr28:1952754-1953306 (view UCSC Genome Browser custom track) |
Alignm length: | 571 |
Alignm identity: | 397 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 90, 21 |
Conread position: | 17-579 |
Cow position: | chr28:6780717-6780151 (view UCSC Genome Browser custom track) |
Alignm length: | 576 |
Alignm identity: | 392 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 90, 147 |
Conread position: | 18-579 |
Cow position: | chr28:21358632-21359184 (view UCSC Genome Browser custom track) |
Alignm length: | 566 |
Alignm identity: | 441 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 89, 75 |
Conread position: | 21-174 |
Cow position: | chr28:15378400-15378247 (view UCSC Genome Browser custom track) |
Alignm length: | 155 |
Alignm identity: | 119 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 84, 128 |
Conread position: | 21-183 |
Cow position: | chr28:1504255-1504417 (view UCSC Genome Browser custom track) |
Alignm length: | 164 |
Alignm identity: | 123 |
Alignm E-value: | 6e-28 |
Alignm gaps (pig, cow): | 81, 128 |
Conread position: | 21-183 |
Cow position: | chr28:15035802-15035640 (view UCSC Genome Browser custom track) |
Alignm length: | 164 |
Alignm identity: | 127 |
Alignm E-value: | 8e-32 |
Alignm gaps (pig, cow): | 85, 128 |
Conread position: | 21-189 |
Cow position: | chr28:7739868-7740037 (view UCSC Genome Browser custom track) |
Alignm length: | 170 |
Alignm identity: | 131 |
Alignm E-value: | 1e-33 |
Alignm gaps (pig, cow): | 86, 0 |
Conread position: | 21-235 |
Cow position: | chr28:5115456-5115252 (view UCSC Genome Browser custom track) |
Alignm length: | 216 |
Alignm identity: | 160 |
Alignm E-value: | 8e-32 |
Alignm gaps (pig, cow): | 85, 39 |
Conread position: | 21-387 |
Cow position: | chr28:34593457-34593832 (view UCSC Genome Browser custom track) |
Alignm length: | 377 |
Alignm identity: | 283 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 85, 128 |
Conread position: | 21-537 |
Cow position: | chr28:5565475-5566003 (view UCSC Genome Browser custom track) |
Alignm length: | 532 |
Alignm identity: | 394 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 86, 133 |
Conread position: | 21-563 |
Cow position: | chr28:18520847-18520297 (view UCSC Genome Browser custom track) |
Alignm length: | 557 |
Alignm identity: | 406 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 86, 128 |
Conread position: | 21-567 |
Cow position: | chr28:8378180-8378739 (view UCSC Genome Browser custom track) |
Alignm length: | 562 |
Alignm identity: | 416 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 86, 471 |
Conread position: | 21-573 |
Cow position: | chr28:2083218-2083773 (view UCSC Genome Browser custom track) |
Alignm length: | 566 |
Alignm identity: | 420 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 86, 133 |
Conread position: | 21-573 |
Cow position: | chr28:17388095-17388658 (view UCSC Genome Browser custom track) |
Alignm length: | 567 |
Alignm identity: | 418 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 86, 133 |
Conread position: | 21-573 |
Cow position: | chr28:17667898-17667337 (view UCSC Genome Browser custom track) |
Alignm length: | 567 |
Alignm identity: | 425 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 86, 133 |
Conread position: | 21-579 |
Cow position: | chr28:782011-782577 (view UCSC Genome Browser custom track) |
Alignm length: | 573 |
Alignm identity: | 428 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 12, 129 |
Conread position: | 21-579 |
Cow position: | chr28:3193161-3192609 (view UCSC Genome Browser custom track) |
Alignm length: | 573 |
Alignm identity: | 422 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 85, 110 |
Conread position: | 21-579 |
Cow position: | chr28:13459588-13460152 (view UCSC Genome Browser custom track) |
Alignm length: | 571 |
Alignm identity: | 434 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 86, 110 |
Conread position: | 21-579 |
Cow position: | chr28:32792765-32792197 (view UCSC Genome Browser custom track) |
Alignm length: | 572 |
Alignm identity: | 434 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 86, 133 |
Conread position: | 21-579 |
Cow position: | chr28:33251958-33252496 (view UCSC Genome Browser custom track) |
Alignm length: | 564 |
Alignm identity: | 400 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 85, 128 |
Conread position: | 23-579 |
Cow position: | chr28:7900976-7901537 (view UCSC Genome Browser custom track) |
Alignm length: | 572 |
Alignm identity: | 421 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 84, 28 |
Conread position: | 23-579 |
Cow position: | chr28:9953751-9954315 (view UCSC Genome Browser custom track) |
Alignm length: | 572 |
Alignm identity: | 427 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 85, 124 |
Conread position: | 27-579 |
Cow position: | chr28:13441257-13440694 (view UCSC Genome Browser custom track) |
Alignm length: | 567 |
Alignm identity: | 407 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 80, 121 |
Conread position: | 27-579 |
Cow position: | chr28:14750168-14750729 (view UCSC Genome Browser custom track) |
Alignm length: | 568 |
Alignm identity: | 413 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 80, 121 |
Conread position: | 30-501 |
Cow position: | chr28:15681516-15682009 (view UCSC Genome Browser custom track) |
Alignm length: | 497 |
Alignm identity: | 361 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 77, 127 |
Conread position: | 31-543 |
Cow position: | chr28:15585021-15585528 (view UCSC Genome Browser custom track) |
Alignm length: | 525 |
Alignm identity: | 335 |
Alignm E-value: | 5e-38 |
Alignm gaps (pig, cow): | 75, 117 |
Conread position: | 32-320 |
Cow position: | chr28:3774212-3773919 (view UCSC Genome Browser custom track) |
Alignm length: | 299 |
Alignm identity: | 195 |
Alignm E-value: | 8e-21 |
Alignm gaps (pig, cow): | 34, 22 |
Conread position: | 36-273 |
Cow position: | chr28:26007660-26007900 (view UCSC Genome Browser custom track) |
Alignm length: | 242 |
Alignm identity: | 177 |
Alignm E-value: | 7e-40 |
Alignm gaps (pig, cow): | 71, 188 |
Conread position: | 39-573 |
Cow position: | chr28:1815235-1814691 (view UCSC Genome Browser custom track) |
Alignm length: | 549 |
Alignm identity: | 408 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 68, 115 |
Conread position: | 40-448 |
Cow position: | chr28:17330899-17330473 (view UCSC Genome Browser custom track) |
Alignm length: | 429 |
Alignm identity: | 310 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 68, 184 |
Conread position: | 41-189 |
Cow position: | chr28:9137394-9137246 (view UCSC Genome Browser custom track) |
Alignm length: | 150 |
Alignm identity: | 116 |
Alignm E-value: | 6e-28 |
Alignm gaps (pig, cow): | 66, 107 |
Conread position: | 41-466 |
Cow position: | chr28:32331764-32331335 (view UCSC Genome Browser custom track) |
Alignm length: | 436 |
Alignm identity: | 278 |
Alignm E-value: | 4e-36 |
Alignm gaps (pig, cow): | 93, 61 |
Conread position: | 64-579 |
Cow position: | chr28:7821922-7822440 (view UCSC Genome Browser custom track) |
Alignm length: | 533 |
Alignm identity: | 383 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 43, 63 |
Conread position: | 71-579 |
Cow position: | chr28:24587100-24587617 (view UCSC Genome Browser custom track) |
Alignm length: | 528 |
Alignm identity: | 383 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 21, 60 |
Conread position: | 81-319 |
Cow position: | chr28:14491139-14491374 (view UCSC Genome Browser custom track) |
Alignm length: | 242 |
Alignm identity: | 176 |
Alignm E-value: | 4e-35 |
Alignm gaps (pig, cow): | 26, 59 |
Conread position: | 82-573 |
Cow position: | chr28:7001663-7002166 (view UCSC Genome Browser custom track) |
Alignm length: | 507 |
Alignm identity: | 383 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 25, 72 |
Conread position: | 107-579 |
Cow position: | chr28:4381108-4380662 (view UCSC Genome Browser custom track) |
Alignm length: | 478 |
Alignm identity: | 355 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 142, 40 |
Conread position: | 168-573 |
Cow position: | chr28:1504616-1505028 (view UCSC Genome Browser custom track) |
Alignm length: | 415 |
Alignm identity: | 304 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 84, 322 |
Conread position: | 178-540 |
Cow position: | chr28:24652062-24652427 (view UCSC Genome Browser custom track) |
Alignm length: | 380 |
Alignm identity: | 267 |
Alignm E-value: | 8.99634e-43 |
Alignm gaps (pig, cow): | 67, 239 |
Conread position: | 179-386 |
Cow position: | chr28:5752105-5751884 (view UCSC Genome Browser custom track) |
Alignm length: | 222 |
Alignm identity: | 165 |
Alignm E-value: | 3e-33 |
Alignm gaps (pig, cow): | 68, 0 |
Conread position: | 179-579 |
Cow position: | chr28:15378220-15377809 (view UCSC Genome Browser custom track) |
Alignm length: | 414 |
Alignm identity: | 300 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 58, 313 |
Conread position: | 180-401 |
Cow position: | chr28:2989909-2989682 (view UCSC Genome Browser custom track) |
Alignm length: | 229 |
Alignm identity: | 173 |
Alignm E-value: | 2e-39 |
Alignm gaps (pig, cow): | 59, 106 |
Conread position: | 206-568 |
Cow position: | chr28:24667380-24667751 (view UCSC Genome Browser custom track) |
Alignm length: | 378 |
Alignm identity: | 276 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 41, 57 |
Conread position: | 235-568 |
Cow position: | chr28:12410377-12410052 (view UCSC Genome Browser custom track) |
Alignm length: | 335 |
Alignm identity: | 252 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 34, 10 |
Conread position: | 235-579 |
Cow position: | chr28:5114967-5114629 (view UCSC Genome Browser custom track) |
Alignm length: | 354 |
Alignm identity: | 259 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 34, 10 |
Conread position: | 238-579 |
Cow position: | chr28:17935200-17934855 (view UCSC Genome Browser custom track) |
Alignm length: | 353 |
Alignm identity: | 224 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 33, 7 |
Conread position: | 241-527 |
Cow position: | chr28:6657470-6657175 (view UCSC Genome Browser custom track) |
Alignm length: | 300 |
Alignm identity: | 199 |
Alignm E-value: | 4e-25 |
Alignm gaps (pig, cow): | 25, 173 |
Conread position: | 248-579 |
Cow position: | chr28:7740340-7740668 (view UCSC Genome Browser custom track) |
Alignm length: | 336 |
Alignm identity: | 250 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 65, 23 |
Conread position: | 253-420 |
Cow position: | chr28:15035646-15035471 (view UCSC Genome Browser custom track) |
Alignm length: | 176 |
Alignm identity: | 129 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 16, 0 |
Conread position: | 265-568 |
Cow position: | chr28:7790435-7790115 (view UCSC Genome Browser custom track) |
Alignm length: | 323 |
Alignm identity: | 236 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 34, 235 |
Conread position: | 283-563 |
Cow position: | chr28:9137168-9136884 (view UCSC Genome Browser custom track) |
Alignm length: | 288 |
Alignm identity: | 219 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 28, 163 |
Conread position: | 299-579 |
Cow position: | chr28:2724988-2724708 (view UCSC Genome Browser custom track) |
Alignm length: | 283 |
Alignm identity: | 204 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 34, 184 |
Conread position: | 309-484 |
Cow position: | chr28:22233776-22233600 (view UCSC Genome Browser custom track) |
Alignm length: | 178 |
Alignm identity: | 131 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 24, 134 |
Conread position: | 370-579 |
Cow position: | chr28:5751730-5751524 (view UCSC Genome Browser custom track) |
Alignm length: | 210 |
Alignm identity: | 163 |
Alignm E-value: | 2.99878e-43 |
Alignm gaps (pig, cow): | 5, 0 |
Conread position: | 377-569 |
Cow position: | chr28:34593961-34594151 (view UCSC Genome Browser custom track) |
Alignm length: | 193 |
Alignm identity: | 149 |
Alignm E-value: | 6e-39 |
Alignm gaps (pig, cow): | 104, 0 |
Conread position: | 377-573 |
Cow position: | chr28:1167899-1167705 (view UCSC Genome Browser custom track) |
Alignm length: | 198 |
Alignm identity: | 152 |
Alignm E-value: | 2e-37 |
Alignm gaps (pig, cow): | 167, 89 |
Conread position: | 407-573 |
Cow position: | chr28:29819745-29819910 (view UCSC Genome Browser custom track) |
Alignm length: | 168 |
Alignm identity: | 127 |
Alignm E-value: | 6e-29 |
Alignm gaps (pig, cow): | 19, 80 |
Conread position: | 431-568 |
Cow position: | chr28:2989679-2989546 (view UCSC Genome Browser custom track) |
Alignm length: | 138 |
Alignm identity: | 111 |
Alignm E-value: | 5e-27 |
Alignm gaps (pig, cow): | 12, 0 |
Conread position: | 431-579 |
Cow position: | chr28:1931948-1931802 (view UCSC Genome Browser custom track) |
Alignm length: | 149 |
Alignm identity: | 118 |
Alignm E-value: | 2e-30 |
Alignm gaps (pig, cow): | 55, 0 |
Conread position: | 432-582 |
Cow position: | chr28:5797470-5797617 (view UCSC Genome Browser custom track) |
Alignm length: | 151 |
Alignm identity: | 122 |
Alignm E-value: | 9e-33 |
Alignm gaps (pig, cow): | 54, 0 |
Show alignments to all cow chromosomes.