Cow genome map


           Conread name:
           LyN1-MLN01F050049
        

               Conread position:
               1-128
               

               Cow position:
               
               

               Alignm length:
               129
               

               Alignm identity:
               100
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               105, 0
               

               Conread position:
               1-128
               

               Cow position:
               
               

               Alignm length:
               129
               

               Alignm identity:
               101
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               105, 0
               

               Conread position:
               1-150
               

               Cow position:
               
               

               Alignm length:
               151
               

               Alignm identity:
               114
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               105, 0
               

               Conread position:
               1-535
               

               Cow position:
               
               

               Alignm length:
               554
               

               Alignm identity:
               409
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 157
               

               Conread position:
               1-550
               

               Cow position:
               
               

               Alignm length:
               566
               

               Alignm identity:
               371
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 234
               

               Conread position:
               1-573
               

               Cow position:
               
               

               Alignm length:
               590
               

               Alignm identity:
               438
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 152
               

               Conread position:
               1-573
               

               Cow position:
               
               

               Alignm length:
               594
               

               Alignm identity:
               448
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 157
               

               Conread position:
               1-573
               

               Cow position:
               
               

               Alignm length:
               587
               

               Alignm identity:
               411
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 133
               

               Conread position:
               1-573
               

               Cow position:
               
               

               Alignm length:
               583
               

               Alignm identity:
               429
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               106, 45
               

               Conread position:
               1-574
               

               Cow position:
               
               

               Alignm length:
               591
               

               Alignm identity:
               441
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 157
               

               Conread position:
               1-579
               

               Cow position:
               
               

               Alignm length:
               593
               

               Alignm identity:
               427
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               105, 147
               

               Conread position:
               2-404
               

               Cow position:
               
               

               Alignm length:
               417
               

               Alignm identity:
               305
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 75
               

               Conread position:
               4-573
               

               Cow position:
               
               

               Alignm length:
               582
               

               Alignm identity:
               427
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 24
               

               Conread position:
               5-579
               

               Cow position:
               
               

               Alignm length:
               603
               

               Alignm identity:
               380
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               213, 31
               

               Conread position:
               6-165
               

               Cow position:
               
               

               Alignm length:
               162
               

               Alignm identity:
               124
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               100, 142
               

               Conread position:
               7-579
               

               Cow position:
               
               

               Alignm length:
               611
               

               Alignm identity:
               439
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               214, 21
               

               Conread position:
               7-579
               

               Cow position:
               
               

               Alignm length:
               586
               

               Alignm identity:
               439
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               99, 21
               

               Conread position:
               7-586
               

               Cow position:
               
               

               Alignm length:
               591
               

               Alignm identity:
               416
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               102, 20
               

               Conread position:
               9-351
               

               Cow position:
               
               

               Alignm length:
               346
               

               Alignm identity:
               261
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               97, 139
               

               Conread position:
               9-574
               

               Cow position:
               
               

               Alignm length:
               576
               

               Alignm identity:
               409
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               98, 18
               

               Conread position:
               16-573
               

               Cow position:
               
               

               Alignm length:
               580
               

               Alignm identity:
               419
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               90, 96
               

               Conread position:
               16-579
               

               Cow position:
               
               

               Alignm length:
               577
               

               Alignm identity:
               411
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 128
               

               Conread position:
               16-580
               

               Cow position:
               
               

               Alignm length:
               576
               

               Alignm identity:
               393
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 128
               

               Conread position:
               17-407
               

               Cow position:
               
               

               Alignm length:
               405
               

               Alignm identity:
               271
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               90, 131
               

               Conread position:
               17-543
               

               Cow position:
               
               

               Alignm length:
               542
               

               Alignm identity:
               391
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 131
               

               Conread position:
               17-569
               

               Cow position:
               
               

               Alignm length:
               564
               

               Alignm identity:
               399
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               90, 38
               

               Conread position:
               17-573
               

               Cow position:
               
               

               Alignm length:
               567
               

               Alignm identity:
               390
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               236, 73
               

               Conread position:
               17-574
               

               Cow position:
               
               

               Alignm length:
               572
               

               Alignm identity:
               404
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               90, 335
               

               Conread position:
               17-579
               

               Cow position:
               
               

               Alignm length:
               577
               

               Alignm identity:
               405
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               90, 126
               

               Conread position:
               21-250
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               171
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               86, 128
               

               Conread position:
               21-569
               

               Cow position:
               
               

               Alignm length:
               562
               

               Alignm identity:
               419
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               86, 49
               

               Conread position:
               21-572
               

               Cow position:
               
               

               Alignm length:
               566
               

               Alignm identity:
               423
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               86, 133
               

               Conread position:
               21-573
               

               Cow position:
               
               

               Alignm length:
               567
               

               Alignm identity:
               423
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               86, 133
               

               Conread position:
               21-573
               

               Cow position:
               
               

               Alignm length:
               575
               

               Alignm identity:
               421
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               85, 91
               

               Conread position:
               21-573
               

               Cow position:
               
               

               Alignm length:
               565
               

               Alignm identity:
               420
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               86, 72
               

               Conread position:
               21-573
               

               Cow position:
               
               

               Alignm length:
               567
               

               Alignm identity:
               421
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               85, 128
               

               Conread position:
               21-579
               

               Cow position:
               
               

               Alignm length:
               574
               

               Alignm identity:
               434
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 21
               

               Conread position:
               21-579
               

               Cow position:
               
               

               Alignm length:
               572
               

               Alignm identity:
               425
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               86, 133
               

               Conread position:
               21-579
               

               Cow position:
               
               

               Alignm length:
               573
               

               Alignm identity:
               431
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               86, 133
               

               Conread position:
               21-579
               

               Cow position:
               
               

               Alignm length:
               576
               

               Alignm identity:
               406
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               86, 72
               

               Conread position:
               21-579
               

               Cow position:
               
               

               Alignm length:
               570
               

               Alignm identity:
               427
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               86, 133
               

               Conread position:
               21-579
               

               Cow position:
               
               

               Alignm length:
               573
               

               Alignm identity:
               428
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               85, 128
               

               Conread position:
               22-579
               

               Cow position:
               
               

               Alignm length:
               565
               

               Alignm identity:
               420
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               85, 132
               

               Conread position:
               22-579
               

               Cow position:
               
               

               Alignm length:
               572
               

               Alignm identity:
               424
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               85, 131
               

               Conread position:
               23-579
               

               Cow position:
               
               

               Alignm length:
               570
               

               Alignm identity:
               406
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               84, 17
               

               Conread position:
               23-579
               

               Cow position:
               
               

               Alignm length:
               567
               

               Alignm identity:
               424
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               84, 111
               

               Conread position:
               23-579
               

               Cow position:
               
               

               Alignm length:
               569
               

               Alignm identity:
               425
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               85, 125
               

               Conread position:
               23-587
               

               Cow position:
               
               

               Alignm length:
               589
               

               Alignm identity:
               439
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               85, 125
               

               Conread position:
               27-230
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               142
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               79, 104
               

               Conread position:
               27-243
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               21, 122
               

               Conread position:
               27-579
               

               Cow position:
               
               

               Alignm length:
               566
               

               Alignm identity:
               398
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               80, 342
               

               Conread position:
               27-579
               

               Cow position:
               
               

               Alignm length:
               567
               

               Alignm identity:
               412
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               80, 128
               

               Conread position:
               30-579
               

               Cow position:
               
               

               Alignm length:
               569
               

               Alignm identity:
               407
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 32
               

               Conread position:
               31-484
               

               Cow position:
               
               

               Alignm length:
               469
               

               Alignm identity:
               299
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               37, 25
               

               Conread position:
               31-568
               

               Cow position:
               
               

               Alignm length:
               555
               

               Alignm identity:
               368
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               75, 97
               

               Conread position:
               31-579
               

               Cow position:
               
               

               Alignm length:
               564
               

               Alignm identity:
               396
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               76, 99
               

               Conread position:
               35-309
               

               Cow position:
               
               

               Alignm length:
               291
               

               Alignm identity:
               207
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               72, 123
               

               Conread position:
               41-579
               

               Cow position:
               
               

               Alignm length:
               549
               

               Alignm identity:
               361
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 123
               

               Conread position:
               43-579
               

               Cow position:
               
               

               Alignm length:
               551
               

               Alignm identity:
               391
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 112
               

               Conread position:
               91-579
               

               Cow position:
               
               

               Alignm length:
               500
               

               Alignm identity:
               365
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 114
               

               Conread position:
               129-579
               

               Cow position:
               
               

               Alignm length:
               457
               

               Alignm identity:
               307
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               16, 131
               

               Conread position:
               130-309
               

               Cow position:
               
               

               Alignm length:
               187
               

               Alignm identity:
               133
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               136-519
               

               Cow position:
               
               

               Alignm length:
               397
               

               Alignm identity:
               283
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               116, 358
               

               Conread position:
               139-527
               

               Cow position:
               
               

               Alignm length:
               402
               

               Alignm identity:
               287
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               97, 333
               

               Conread position:
               139-574
               

               Cow position:
               
               

               Alignm length:
               447
               

               Alignm identity:
               341
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               108, 67
               

               Conread position:
               142-452
               

               Cow position:
               
               

               Alignm length:
               325
               

               Alignm identity:
               223
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               20, 78
               

               Conread position:
               142-540
               

               Cow position:
               
               

               Alignm length:
               416
               

               Alignm identity:
               269
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               103, 5
               

               Conread position:
               156-309
               

               Cow position:
               
               

               Alignm length:
               158
               

               Alignm identity:
               116
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               169-579
               

               Cow position:
               
               

               Alignm length:
               427
               

               Alignm identity:
               295
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               66, 206
               

               Conread position:
               196-546
               

               Cow position:
               
               

               Alignm length:
               368
               

               Alignm identity:
               254
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               56, 170
               

               Conread position:
               228-579
               

               Cow position:
               
               

               Alignm length:
               360
               

               Alignm identity:
               233
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               69, 12
               

               Conread position:
               231-579
               

               Cow position:
               
               

               Alignm length:
               358
               

               Alignm identity:
               255
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 259
               

               Conread position:
               255-579
               

               Cow position:
               
               

               Alignm length:
               334
               

               Alignm identity:
               242
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 235
               

               Conread position:
               283-517
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               175
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               30, 205
               

               Conread position:
               299-445
               

               Cow position:
               
               

               Alignm length:
               149
               

               Alignm identity:
               110
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               34, 139
               

               Conread position:
               299-579
               

               Cow position:
               
               

               Alignm length:
               283
               

               Alignm identity:
               211
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 184
               

               Conread position:
               312-574
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               194
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               18, 108
               

               Conread position:
               312-579
               

               Cow position:
               
               

               Alignm length:
               270
               

               Alignm identity:
               200
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 171
               

               Conread position:
               332-579
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               187
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               149, 0
               

               Conread position:
               368-566
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               167
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               113, 0
               

               Conread position:
               368-579
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               160
               

               Alignm E-value:
               8.99999e-40
               

               Alignm gaps (pig, cow):
               139, 123
               

               Conread position:
               368-579
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               113, 0
               

               Conread position:
               375-573
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               151
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               409-579
               

               Cow position:
               
               

               Alignm length:
               173
               

               Alignm identity:
               134
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               8, 79
               
Show alignments to all cow chromosomes.