Cow genome map
Conread name: | LyN1-MLN01F050049 |
Conread position: | 1-318 |
Cow position: | chr4:6449605-6449288 (view UCSC Genome Browser custom track) |
Alignm length: | 328 |
Alignm identity: | 214 |
Alignm E-value: | 6e-23 |
Alignm gaps (pig, cow): | 62, 142 |
Conread position: | 1-357 |
Cow position: | chr4:54955251-54955611 (view UCSC Genome Browser custom track) |
Alignm length: | 362 |
Alignm identity: | 138 |
Alignm E-value: | 1e-29 |
Alignm gaps (pig, cow): | 11, 151 |
Conread position: | 1-568 |
Cow position: | chr4:3829777-3830335 (view UCSC Genome Browser custom track) |
Alignm length: | 583 |
Alignm identity: | 388 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 21, 128 |
Conread position: | 1-568 |
Cow position: | chr4:8598849-8598297 (view UCSC Genome Browser custom track) |
Alignm length: | 574 |
Alignm identity: | 389 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 39, 13 |
Conread position: | 1-573 |
Cow position: | chr4:355194-355774 (view UCSC Genome Browser custom track) |
Alignm length: | 586 |
Alignm identity: | 441 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 12, 158 |
Conread position: | 1-573 |
Cow position: | chr4:25600322-25599754 (view UCSC Genome Browser custom track) |
Alignm length: | 584 |
Alignm identity: | 425 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 12, 158 |
Conread position: | 1-573 |
Cow position: | chr4:29532436-29531850 (view UCSC Genome Browser custom track) |
Alignm length: | 591 |
Alignm identity: | 437 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 27, 158 |
Conread position: | 1-579 |
Cow position: | chr4:12241936-12241347 (view UCSC Genome Browser custom track) |
Alignm length: | 595 |
Alignm identity: | 438 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 106, 14 |
Conread position: | 1-579 |
Cow position: | chr4:28830323-28830900 (view UCSC Genome Browser custom track) |
Alignm length: | 594 |
Alignm identity: | 426 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 206, 119 |
Conread position: | 1-579 |
Cow position: | chr4:48025684-48026268 (view UCSC Genome Browser custom track) |
Alignm length: | 589 |
Alignm identity: | 436 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 106, 153 |
Conread position: | 2-314 |
Cow position: | chr4:21358949-21359246 (view UCSC Genome Browser custom track) |
Alignm length: | 315 |
Alignm identity: | 208 |
Alignm E-value: | 3e-25 |
Alignm gaps (pig, cow): | 263, 96 |
Conread position: | 2-384 |
Cow position: | chr4:54190158-54190533 (view UCSC Genome Browser custom track) |
Alignm length: | 395 |
Alignm identity: | 296 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 16, 25 |
Conread position: | 3-579 |
Cow position: | chr4:22471494-22472039 (view UCSC Genome Browser custom track) |
Alignm length: | 586 |
Alignm identity: | 372 |
Alignm E-value: | 2e-30 |
Alignm gaps (pig, cow): | 61, 66 |
Conread position: | 3-586 |
Cow position: | chr4:1464634-1464046 (view UCSC Genome Browser custom track) |
Alignm length: | 598 |
Alignm identity: | 421 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 9, 45 |
Conread position: | 4-532 |
Cow position: | chr4:1371705-1371180 (view UCSC Genome Browser custom track) |
Alignm length: | 550 |
Alignm identity: | 392 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 19, 60 |
Conread position: | 4-537 |
Cow position: | chr4:46663483-46664024 (view UCSC Genome Browser custom track) |
Alignm length: | 551 |
Alignm identity: | 412 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 9, 87 |
Conread position: | 4-579 |
Cow position: | chr4:16359176-16359753 (view UCSC Genome Browser custom track) |
Alignm length: | 585 |
Alignm identity: | 429 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 37, 16 |
Conread position: | 6-529 |
Cow position: | chr4:31668603-31669129 (view UCSC Genome Browser custom track) |
Alignm length: | 537 |
Alignm identity: | 390 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 6, 144 |
Conread position: | 7-573 |
Cow position: | chr4:47718299-47717742 (view UCSC Genome Browser custom track) |
Alignm length: | 578 |
Alignm identity: | 415 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 258, 20 |
Conread position: | 7-579 |
Cow position: | chr4:66925298-66925870 (view UCSC Genome Browser custom track) |
Alignm length: | 588 |
Alignm identity: | 428 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 101, 20 |
Conread position: | 9-161 |
Cow position: | chr4:10408033-10408182 (view UCSC Genome Browser custom track) |
Alignm length: | 154 |
Alignm identity: | 120 |
Alignm E-value: | 3e-27 |
Alignm gaps (pig, cow): | 98, 18 |
Conread position: | 16-557 |
Cow position: | chr4:34185554-34185022 (view UCSC Genome Browser custom track) |
Alignm length: | 553 |
Alignm identity: | 405 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 34, 72 |
Conread position: | 16-574 |
Cow position: | chr4:21338682-21338137 (view UCSC Genome Browser custom track) |
Alignm length: | 568 |
Alignm identity: | 421 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 91, 49 |
Conread position: | 17-309 |
Cow position: | chr4:9311535-9311832 (view UCSC Genome Browser custom track) |
Alignm length: | 299 |
Alignm identity: | 206 |
Alignm E-value: | 1e-38 |
Alignm gaps (pig, cow): | 90, 130 |
Conread position: | 17-406 |
Cow position: | chr4:23114878-23114476 (view UCSC Genome Browser custom track) |
Alignm length: | 404 |
Alignm identity: | 279 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 90, 138 |
Conread position: | 17-550 |
Cow position: | chr4:3125079-3125619 (view UCSC Genome Browser custom track) |
Alignm length: | 548 |
Alignm identity: | 390 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 89, 131 |
Conread position: | 17-558 |
Cow position: | chr4:6215247-6214709 (view UCSC Genome Browser custom track) |
Alignm length: | 558 |
Alignm identity: | 371 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 90, 29 |
Conread position: | 17-562 |
Cow position: | chr4:40824951-40824399 (view UCSC Genome Browser custom track) |
Alignm length: | 565 |
Alignm identity: | 379 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 70, 116 |
Conread position: | 17-573 |
Cow position: | chr4:47764872-47764305 (view UCSC Genome Browser custom track) |
Alignm length: | 571 |
Alignm identity: | 414 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 90, 131 |
Conread position: | 17-579 |
Cow position: | chr4:101630-101062 (view UCSC Genome Browser custom track) |
Alignm length: | 577 |
Alignm identity: | 404 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 90, 39 |
Conread position: | 17-579 |
Cow position: | chr4:528291-528864 (view UCSC Genome Browser custom track) |
Alignm length: | 577 |
Alignm identity: | 413 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 90, 137 |
Conread position: | 17-579 |
Cow position: | chr4:602295-602864 (view UCSC Genome Browser custom track) |
Alignm length: | 574 |
Alignm identity: | 412 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 90, 131 |
Conread position: | 17-579 |
Cow position: | chr4:1931322-1930753 (view UCSC Genome Browser custom track) |
Alignm length: | 574 |
Alignm identity: | 413 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 90, 131 |
Conread position: | 17-579 |
Cow position: | chr4:5879484-5880036 (view UCSC Genome Browser custom track) |
Alignm length: | 573 |
Alignm identity: | 410 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 93, 59 |
Conread position: | 17-579 |
Cow position: | chr4:6269323-6268757 (view UCSC Genome Browser custom track) |
Alignm length: | 577 |
Alignm identity: | 412 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 90, 110 |
Conread position: | 17-579 |
Cow position: | chr4:16055892-16056472 (view UCSC Genome Browser custom track) |
Alignm length: | 586 |
Alignm identity: | 412 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 90, 419 |
Conread position: | 17-579 |
Cow position: | chr4:65224236-65223663 (view UCSC Genome Browser custom track) |
Alignm length: | 577 |
Alignm identity: | 414 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 90, 114 |
Conread position: | 18-579 |
Cow position: | chr4:157827-158386 (view UCSC Genome Browser custom track) |
Alignm length: | 575 |
Alignm identity: | 398 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 88, 109 |
Conread position: | 21-233 |
Cow position: | chr4:3358026-3358239 (view UCSC Genome Browser custom track) |
Alignm length: | 215 |
Alignm identity: | 163 |
Alignm E-value: | 9.99995e-41 |
Alignm gaps (pig, cow): | 26, 134 |
Conread position: | 21-233 |
Cow position: | chr4:57978719-57978931 (view UCSC Genome Browser custom track) |
Alignm length: | 214 |
Alignm identity: | 157 |
Alignm E-value: | 3e-36 |
Alignm gaps (pig, cow): | 85, 128 |
Conread position: | 21-235 |
Cow position: | chr4:41118429-41118645 (view UCSC Genome Browser custom track) |
Alignm length: | 218 |
Alignm identity: | 171 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 85, 128 |
Conread position: | 21-248 |
Cow position: | chr4:33074082-33073854 (view UCSC Genome Browser custom track) |
Alignm length: | 230 |
Alignm identity: | 165 |
Alignm E-value: | 3e-35 |
Alignm gaps (pig, cow): | 86, 133 |
Conread position: | 21-279 |
Cow position: | chr4:46713030-46712776 (view UCSC Genome Browser custom track) |
Alignm length: | 264 |
Alignm identity: | 193 |
Alignm E-value: | 4e-39 |
Alignm gaps (pig, cow): | 225, 86 |
Conread position: | 21-471 |
Cow position: | chr4:1050318-1049859 (view UCSC Genome Browser custom track) |
Alignm length: | 466 |
Alignm identity: | 341 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 85, 128 |
Conread position: | 21-569 |
Cow position: | chr4:18516198-18516757 (view UCSC Genome Browser custom track) |
Alignm length: | 563 |
Alignm identity: | 426 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 86, 133 |
Conread position: | 21-573 |
Cow position: | chr4:24445897-24445336 (view UCSC Genome Browser custom track) |
Alignm length: | 568 |
Alignm identity: | 420 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 86, 133 |
Conread position: | 21-573 |
Cow position: | chr4:41330742-41331302 (view UCSC Genome Browser custom track) |
Alignm length: | 569 |
Alignm identity: | 432 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 85, 128 |
Conread position: | 21-573 |
Cow position: | chr4:43320334-43319781 (view UCSC Genome Browser custom track) |
Alignm length: | 567 |
Alignm identity: | 417 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 86, 133 |
Conread position: | 21-573 |
Cow position: | chr4:45049993-45049433 (view UCSC Genome Browser custom track) |
Alignm length: | 564 |
Alignm identity: | 420 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 86, 133 |
Conread position: | 21-574 |
Cow position: | chr4:36895676-36896235 (view UCSC Genome Browser custom track) |
Alignm length: | 568 |
Alignm identity: | 426 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 86, 133 |
Conread position: | 21-579 |
Cow position: | chr4:3960898-3961462 (view UCSC Genome Browser custom track) |
Alignm length: | 571 |
Alignm identity: | 436 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 86, 114 |
Conread position: | 21-579 |
Cow position: | chr4:4905457-4906017 (view UCSC Genome Browser custom track) |
Alignm length: | 573 |
Alignm identity: | 424 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 86, 64 |
Conread position: | 21-579 |
Cow position: | chr4:44724385-44724954 (view UCSC Genome Browser custom track) |
Alignm length: | 573 |
Alignm identity: | 432 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 86, 133 |
Conread position: | 22-579 |
Cow position: | chr4:6491043-6490494 (view UCSC Genome Browser custom track) |
Alignm length: | 570 |
Alignm identity: | 409 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 85, 126 |
Conread position: | 27-566 |
Cow position: | chr4:33493119-33493666 (view UCSC Genome Browser custom track) |
Alignm length: | 555 |
Alignm identity: | 416 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 79, 122 |
Conread position: | 27-573 |
Cow position: | chr4:13491884-13492441 (view UCSC Genome Browser custom track) |
Alignm length: | 561 |
Alignm identity: | 422 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 83, 127 |
Conread position: | 27-573 |
Cow position: | chr4:17926946-17926390 (view UCSC Genome Browser custom track) |
Alignm length: | 561 |
Alignm identity: | 421 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 80, 127 |
Conread position: | 28-251 |
Cow position: | chr4:11617747-11617977 (view UCSC Genome Browser custom track) |
Alignm length: | 231 |
Alignm identity: | 165 |
Alignm E-value: | 6e-33 |
Alignm gaps (pig, cow): | 80, 0 |
Conread position: | 29-579 |
Cow position: | chr4:30308124-30307588 (view UCSC Genome Browser custom track) |
Alignm length: | 566 |
Alignm identity: | 398 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 211, 78 |
Conread position: | 31-235 |
Cow position: | chr4:41954107-41954310 (view UCSC Genome Browser custom track) |
Alignm length: | 207 |
Alignm identity: | 148 |
Alignm E-value: | 1e-28 |
Alignm gaps (pig, cow): | 76, 103 |
Conread position: | 32-573 |
Cow position: | chr4:43880423-43880973 (view UCSC Genome Browser custom track) |
Alignm length: | 556 |
Alignm identity: | 421 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 75, 122 |
Conread position: | 41-579 |
Cow position: | chr4:13547351-13547900 (view UCSC Genome Browser custom track) |
Alignm length: | 554 |
Alignm identity: | 391 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 66, 12 |
Conread position: | 53-356 |
Cow position: | chr4:27442433-27442740 (view UCSC Genome Browser custom track) |
Alignm length: | 320 |
Alignm identity: | 224 |
Alignm E-value: | 2e-30 |
Alignm gaps (pig, cow): | 18, 24 |
Conread position: | 64-295 |
Cow position: | chr4:60265442-60265205 (view UCSC Genome Browser custom track) |
Alignm length: | 244 |
Alignm identity: | 180 |
Alignm E-value: | 7e-34 |
Alignm gaps (pig, cow): | 42, 68 |
Conread position: | 65-579 |
Cow position: | chr4:1497407-1496888 (view UCSC Genome Browser custom track) |
Alignm length: | 536 |
Alignm identity: | 342 |
Alignm E-value: | 2e-34 |
Alignm gaps (pig, cow): | 42, 160 |
Conread position: | 100-579 |
Cow position: | chr4:32211548-32212038 (view UCSC Genome Browser custom track) |
Alignm length: | 494 |
Alignm identity: | 354 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 152, 264 |
Conread position: | 132-579 |
Cow position: | chr4:39272524-39272065 (view UCSC Genome Browser custom track) |
Alignm length: | 465 |
Alignm identity: | 315 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 95, 15 |
Conread position: | 134-573 |
Cow position: | chr4:496521-496092 (view UCSC Genome Browser custom track) |
Alignm length: | 447 |
Alignm identity: | 290 |
Alignm E-value: | 2e-34 |
Alignm gaps (pig, cow): | 48, 20 |
Conread position: | 136-543 |
Cow position: | chr4:12715402-12715817 (view UCSC Genome Browser custom track) |
Alignm length: | 421 |
Alignm identity: | 263 |
Alignm E-value: | 7e-24 |
Alignm gaps (pig, cow): | 8, 70 |
Conread position: | 138-579 |
Cow position: | chr4:18425098-18424654 (view UCSC Genome Browser custom track) |
Alignm length: | 452 |
Alignm identity: | 326 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 104, 319 |
Conread position: | 140-407 |
Cow position: | chr4:10408200-10408482 (view UCSC Genome Browser custom track) |
Alignm length: | 284 |
Alignm identity: | 212 |
Alignm E-value: | 7.00649e-44 |
Alignm gaps (pig, cow): | 23, 7 |
Conread position: | 148-579 |
Cow position: | chr4:60673333-60673735 (view UCSC Genome Browser custom track) |
Alignm length: | 436 |
Alignm identity: | 291 |
Alignm E-value: | 7e-34 |
Alignm gaps (pig, cow): | 16, 108 |
Conread position: | 150-579 |
Cow position: | chr4:66179554-66179117 (view UCSC Genome Browser custom track) |
Alignm length: | 441 |
Alignm identity: | 338 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 103, 13 |
Conread position: | 180-412 |
Cow position: | chr4:12608040-12607799 (view UCSC Genome Browser custom track) |
Alignm length: | 246 |
Alignm identity: | 180 |
Alignm E-value: | 2e-32 |
Alignm gaps (pig, cow): | 69, 13 |
Conread position: | 206-573 |
Cow position: | chr4:26887356-26886998 (view UCSC Genome Browser custom track) |
Alignm length: | 380 |
Alignm identity: | 278 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 41, 192 |
Conread position: | 223-544 |
Cow position: | chr4:15263478-15263158 (view UCSC Genome Browser custom track) |
Alignm length: | 330 |
Alignm identity: | 217 |
Alignm E-value: | 3e-27 |
Alignm gaps (pig, cow): | 76, 11 |
Conread position: | 232-579 |
Cow position: | chr4:57979147-57979499 (view UCSC Genome Browser custom track) |
Alignm length: | 358 |
Alignm identity: | 259 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 5, 223 |
Conread position: | 234-566 |
Cow position: | chr4:969519-969187 (view UCSC Genome Browser custom track) |
Alignm length: | 344 |
Alignm identity: | 231 |
Alignm E-value: | 2e-30 |
Alignm gaps (pig, cow): | 8, 62 |
Conread position: | 235-561 |
Cow position: | chr4:33073576-33073256 (view UCSC Genome Browser custom track) |
Alignm length: | 337 |
Alignm identity: | 245 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 34, 10 |
Conread position: | 239-579 |
Cow position: | chr4:27332968-27333306 (view UCSC Genome Browser custom track) |
Alignm length: | 351 |
Alignm identity: | 255 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 33, 6 |
Conread position: | 239-586 |
Cow position: | chr4:11618385-11618731 (view UCSC Genome Browser custom track) |
Alignm length: | 353 |
Alignm identity: | 260 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 30, 195 |
Conread position: | 244-580 |
Cow position: | chr4:62565516-62565855 (view UCSC Genome Browser custom track) |
Alignm length: | 348 |
Alignm identity: | 228 |
Alignm E-value: | 3e-26 |
Alignm gaps (pig, cow): | 6, 69 |
Conread position: | 300-579 |
Cow position: | chr4:60264973-60264697 (view UCSC Genome Browser custom track) |
Alignm length: | 283 |
Alignm identity: | 215 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 10, 110 |
Conread position: | 312-573 |
Cow position: | chr4:41119616-41119878 (view UCSC Genome Browser custom track) |
Alignm length: | 265 |
Alignm identity: | 199 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 20, 168 |
Conread position: | 328-566 |
Cow position: | chr4:23493368-23493594 (view UCSC Genome Browser custom track) |
Alignm length: | 240 |
Alignm identity: | 171 |
Alignm E-value: | 4e-28 |
Alignm gaps (pig, cow): | 24, 12 |
Conread position: | 369-573 |
Cow position: | chr4:12586961-12587163 (view UCSC Genome Browser custom track) |
Alignm length: | 205 |
Alignm identity: | 160 |
Alignm E-value: | 2.00386e-43 |
Alignm gaps (pig, cow): | 112, 0 |
Conread position: | 378-567 |
Cow position: | chr4:61256568-61256755 (view UCSC Genome Browser custom track) |
Alignm length: | 190 |
Alignm identity: | 149 |
Alignm E-value: | 4.00001e-40 |
Alignm gaps (pig, cow): | 103, 0 |
Conread position: | 404-579 |
Cow position: | chr4:9355073-9354900 (view UCSC Genome Browser custom track) |
Alignm length: | 176 |
Alignm identity: | 136 |
Alignm E-value: | 2e-34 |
Alignm gaps (pig, cow): | 77, 0 |
Show alignments to all cow chromosomes.