Cow genome map
| Conread name: | LyN1-MLN01F070009 |
| Conread position: | 1-142 |
| Cow position: | chr10:11216333-11216475 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 86, 0 |
| Conread position: | 1-144 |
| Cow position: | chr10:1423378-1423524 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 111 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 1-146 |
| Cow position: | chr10:2848298-2848155 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 122 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 1-152 |
| Cow position: | chr10:59241199-59241046 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 125 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 88, 11 |
| Conread position: | 1-164 |
| Cow position: | chr10:51695736-51695571 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 134 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 92, 35 |
| Conread position: | 1-164 |
| Cow position: | chr10:53908387-53908555 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 1-181 |
| Cow position: | chr10:17836556-17836742 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 87, 15 |
| Conread position: | 1-182 |
| Cow position: | chr10:37459368-37459541 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 145 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 146, 15 |
| Conread position: | 1-185 |
| Cow position: | chr10:59676313-59676504 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 134 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 1-186 |
| Cow position: | chr10:11221056-11220868 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 147, 76 |
| Conread position: | 1-204 |
| Cow position: | chr10:39265270-39265061 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 144, 0 |
| Conread position: | 1-207 |
| Cow position: | chr10:63313061-63312853 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 146, 74 |
| Conread position: | 1-223 |
| Cow position: | chr10:39940008-39940237 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 181 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 88, 35 |
| Conread position: | 1-235 |
| Cow position: | chr10:61922944-61923191 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 187 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 77, 197 |
| Conread position: | 1-237 |
| Cow position: | chr10:51836839-51837082 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 195 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 82, 193 |
| Conread position: | 1-245 |
| Cow position: | chr10:33665165-33664900 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 198 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 74, 202 |
| Conread position: | 1-256 |
| Cow position: | chr10:22646612-22646361 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 198 |
| Alignm E-value: | 7.00649e-45 |
| Alignm gaps (pig, cow): | 98, 128 |
| Conread position: | 1-256 |
| Cow position: | chr10:37530186-37530444 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 200 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 88, 78 |
| Conread position: | 1-256 |
| Cow position: | chr10:58265233-58265486 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 188 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 141, 73 |
| Conread position: | 1-260 |
| Cow position: | chr10:14640302-14640567 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 193 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 88, 30 |
| Conread position: | 1-266 |
| Cow position: | chr10:9798879-9799151 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 224 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 89, 191 |
| Conread position: | 1-266 |
| Cow position: | chr10:40148528-40148791 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 210 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 152 |
| Conread position: | 1-267 |
| Cow position: | chr10:24785417-24785146 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 210 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 88, 36 |
| Conread position: | 1-268 |
| Cow position: | chr10:19894635-19894366 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 208 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 143, 99 |
| Conread position: | 1-268 |
| Cow position: | chr10:40737329-40737039 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 218 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 82, 214 |
| Conread position: | 1-268 |
| Cow position: | chr10:55098317-55098586 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 207 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 147, 25 |
| Conread position: | 1-272 |
| Cow position: | chr10:34660884-34661164 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 214 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 94, 191 |
| Conread position: | 1-282 |
| Cow position: | chr10:31534075-31533792 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 218 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 147, 90 |
| Conread position: | 1-282 |
| Cow position: | chr10:43288736-43289028 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 224 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 198 |
| Conread position: | 1-292 |
| Cow position: | chr10:47773060-47772754 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 198 |
| Conread position: | 1-295 |
| Cow position: | chr10:38941759-38941456 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 225 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 191 |
| Conread position: | 1-300 |
| Cow position: | chr10:53157784-53158091 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 225 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 88, 198 |
| Conread position: | 1-300 |
| Cow position: | chr10:55096698-55096393 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 41 |
| Conread position: | 1-301 |
| Cow position: | chr10:21490563-21490268 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 222 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 147, 51 |
| Conread position: | 1-310 |
| Cow position: | chr10:21081470-21081158 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 147, 35 |
| Conread position: | 1-311 |
| Cow position: | chr10:23935365-23935072 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 226 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 92, 32 |
| Conread position: | 1-336 |
| Cow position: | chr10:25112-24760 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 240 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 46, 198 |
| Conread position: | 2-240 |
| Cow position: | chr10:15292597-15292355 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 179 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 146, 201 |
| Conread position: | 2-255 |
| Cow position: | chr10:63955130-63954872 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 199 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 72, 187 |
| Conread position: | 2-275 |
| Cow position: | chr10:42276311-42276038 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 188 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 144, 53 |
| Conread position: | 2-311 |
| Cow position: | chr10:31527335-31527021 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 86, 256 |
| Conread position: | 2-323 |
| Cow position: | chr10:3984746-3984420 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 218 |
| Conread position: | 3-296 |
| Cow position: | chr10:6253172-6253468 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 82, 191 |
| Conread position: | 5-266 |
| Cow position: | chr10:21709605-21709872 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 202 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 184 |
| Conread position: | 6-331 |
| Cow position: | chr10:2612705-2612386 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 195, 44 |
| Conread position: | 14-295 |
| Cow position: | chr10:6243097-6243381 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 222 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 133, 174 |
| Conread position: | 28-263 |
| Cow position: | chr10:2527090-2526849 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 186 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 59, 152 |
| Conread position: | 28-264 |
| Cow position: | chr10:10570765-10570525 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 172 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 52, 34 |
| Conread position: | 34-232 |
| Cow position: | chr10:63046196-63045990 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 55, 158 |
| Conread position: | 55-336 |
| Cow position: | chr10:29106250-29106530 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 205 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 92, 25 |
| Conread position: | 57-283 |
| Cow position: | chr10:3317329-3317104 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 11, 6 |
| Conread position: | 66-322 |
| Cow position: | chr10:60723415-60723670 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 189 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 81, 121 |
| Conread position: | 71-300 |
| Cow position: | chr10:25341673-25341439 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 174 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 12, 119 |
Show alignments to all cow chromosomes.