Cow genome map
| Conread name: | LyN1-MLN01F070009 |
| Conread position: | 1-144 |
| Cow position: | chr11:27906601-27906460 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 88, 35 |
| Conread position: | 1-145 |
| Cow position: | chr11:31884852-31884717 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 1-168 |
| Cow position: | chr11:80827045-80827223 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 130 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 1-171 |
| Cow position: | chr11:67951618-67951796 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 1-187 |
| Cow position: | chr11:41178229-41178034 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 153 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 1-198 |
| Cow position: | chr11:11996705-11996902 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 147, 76 |
| Conread position: | 1-199 |
| Cow position: | chr11:24601281-24601072 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 159 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 30, 194 |
| Conread position: | 1-204 |
| Cow position: | chr11:62881362-62881567 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 94, 76 |
| Conread position: | 1-214 |
| Cow position: | chr11:32067978-32068201 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 170 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 77, 192 |
| Conread position: | 1-219 |
| Cow position: | chr11:71271761-71271981 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 172 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 146, 12 |
| Conread position: | 1-247 |
| Cow position: | chr11:50135646-50135896 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 83, 181 |
| Conread position: | 1-258 |
| Cow position: | chr11:79995474-79995735 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 194 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 94, 190 |
| Conread position: | 1-266 |
| Cow position: | chr11:67848684-67848968 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 223 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 202 |
| Conread position: | 1-266 |
| Cow position: | chr11:71078702-71078435 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 210 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 101, 193 |
| Conread position: | 1-268 |
| Cow position: | chr11:74929085-74928799 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 211 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 75, 198 |
| Conread position: | 1-279 |
| Cow position: | chr11:62873440-62873719 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 190 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 74, 214 |
| Conread position: | 1-281 |
| Cow position: | chr11:10094145-10093859 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 223 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 88, 190 |
| Conread position: | 1-281 |
| Cow position: | chr11:21852967-21853262 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 226 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 88, 198 |
| Conread position: | 1-286 |
| Cow position: | chr11:69402944-69403239 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 219 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 95, 210 |
| Conread position: | 1-289 |
| Cow position: | chr11:67599859-67599553 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 228 |
| Alignm E-value: | 6.99949e-42 |
| Alignm gaps (pig, cow): | 88, 197 |
| Conread position: | 1-296 |
| Cow position: | chr11:42793660-42793960 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 88, 182 |
| Conread position: | 1-296 |
| Cow position: | chr11:58399596-58399306 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 20 |
| Conread position: | 1-296 |
| Cow position: | chr11:73513092-73513398 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 171 |
| Conread position: | 1-300 |
| Cow position: | chr11:27938869-27938580 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 215 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 77, 176 |
| Conread position: | 1-300 |
| Cow position: | chr11:40402506-40402800 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 226 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 88, 35 |
| Conread position: | 1-300 |
| Cow position: | chr11:64904378-64904058 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 238 |
| Alignm E-value: | 7.00649e-43 |
| Alignm gaps (pig, cow): | 83, 34 |
| Conread position: | 1-300 |
| Cow position: | chr11:65282287-65281979 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 88, 191 |
| Conread position: | 1-316 |
| Cow position: | chr11:21896427-21896741 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 232 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 74, 55 |
| Conread position: | 1-322 |
| Cow position: | chr11:23495029-23494699 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 191 |
| Conread position: | 1-336 |
| Cow position: | chr11:8499339-8498999 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 146, 180 |
| Conread position: | 1-337 |
| Cow position: | chr11:80789111-80789460 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 193 |
| Conread position: | 3-267 |
| Cow position: | chr11:9214494-9214765 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 190 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 44, 50 |
| Conread position: | 14-185 |
| Cow position: | chr11:75206295-75206112 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 136 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 16-300 |
| Cow position: | chr11:64844331-64844042 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 201 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 58, 174 |
| Conread position: | 18-265 |
| Cow position: | chr11:66943951-66944193 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 194 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 60, 172 |
| Conread position: | 52-300 |
| Cow position: | chr11:56652020-56652271 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 178 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 22, 44 |
| Conread position: | 55-311 |
| Cow position: | chr11:33733367-33733619 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 189 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 36, 27 |
| Conread position: | 65-281 |
| Cow position: | chr11:21371872-21372092 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 30, 14 |
| Conread position: | 70-260 |
| Cow position: | chr11:11257249-11257062 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 131, 25 |
| Conread position: | 77-322 |
| Cow position: | chr11:56228129-56227876 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 192 |
| Alignm E-value: | 5.99994e-41 |
| Alignm gaps (pig, cow): | 15, 114 |
Show alignments to all cow chromosomes.