Cow genome map
| Conread name: | LyN1-MLN01F070009 |
| Conread position: | 1-145 |
| Cow position: | chr16:20234753-20234897 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 118 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-145 |
| Cow position: | chr16:23472100-23471954 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 1-146 |
| Cow position: | chr16:16596613-16596464 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 114 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 1-167 |
| Cow position: | chr16:26671258-26671426 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 147, 97 |
| Conread position: | 1-186 |
| Cow position: | chr16:3632942-3632751 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 1-186 |
| Cow position: | chr16:53225457-53225659 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 153 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 1-190 |
| Cow position: | chr16:43813430-43813240 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 138 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 147, 179 |
| Conread position: | 1-223 |
| Cow position: | chr16:29679818-29680038 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 167 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 146, 78 |
| Conread position: | 1-230 |
| Cow position: | chr16:22386289-22386054 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 169 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 73, 62 |
| Conread position: | 1-246 |
| Cow position: | chr16:44972870-44973122 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 197 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 190 |
| Conread position: | 1-250 |
| Cow position: | chr16:14758064-14757809 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 200 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 34 |
| Conread position: | 1-256 |
| Cow position: | chr16:15369869-15369605 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 211 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 191 |
| Conread position: | 1-256 |
| Cow position: | chr16:51400680-51400939 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 202 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 73, 61 |
| Conread position: | 1-258 |
| Cow position: | chr16:37670631-37670895 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 200 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 86, 190 |
| Conread position: | 1-267 |
| Cow position: | chr16:22320411-22320685 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 211 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 88, 191 |
| Conread position: | 1-268 |
| Cow position: | chr16:45609286-45609012 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 208 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 179 |
| Conread position: | 1-296 |
| Cow position: | chr16:47017890-47018174 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 221 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 149, 14 |
| Conread position: | 1-300 |
| Cow position: | chr16:5756813-5756500 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 231 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 81 |
| Conread position: | 1-300 |
| Cow position: | chr16:9786189-9785886 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 226 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 95, 57 |
| Conread position: | 1-301 |
| Cow position: | chr16:4972646-4972955 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 191 |
| Conread position: | 1-317 |
| Cow position: | chr16:702131-701814 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 151, 26 |
| Conread position: | 1-317 |
| Cow position: | chr16:7457102-7457429 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 25 |
| Conread position: | 1-317 |
| Cow position: | chr16:44676232-44675906 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 1-317 |
| Cow position: | chr16:53509646-53509973 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 194 |
| Conread position: | 1-322 |
| Cow position: | chr16:48341330-48341659 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 88, 36 |
| Conread position: | 1-336 |
| Cow position: | chr16:50190244-50190581 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 88, 74 |
| Conread position: | 2-236 |
| Cow position: | chr16:14722395-14722626 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 174 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 146, 16 |
| Conread position: | 2-296 |
| Cow position: | chr16:8871564-8871867 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 192 |
| Conread position: | 2-296 |
| Cow position: | chr16:25174111-25173816 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 231 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 148, 93 |
| Conread position: | 2-300 |
| Cow position: | chr16:56913360-56913667 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 226 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 191 |
| Conread position: | 3-188 |
| Cow position: | chr16:49126836-49127025 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 86, 110 |
| Conread position: | 3-265 |
| Cow position: | chr16:18745161-18745430 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 217 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 33 |
| Conread position: | 3-315 |
| Cow position: | chr16:7541357-7541041 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 86, 188 |
| Conread position: | 4-279 |
| Cow position: | chr16:48495044-48495326 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 219 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 187 |
| Conread position: | 4-289 |
| Cow position: | chr16:42074019-42074317 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 229 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 12 |
| Conread position: | 8-170 |
| Cow position: | chr16:43802186-43802018 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 126 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 13-186 |
| Cow position: | chr16:39416146-39416328 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 146 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 17-275 |
| Cow position: | chr16:14441236-14440980 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 192 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 128, 75 |
| Conread position: | 41-315 |
| Cow position: | chr16:41804612-41804891 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 210 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 55, 158 |
| Conread position: | 82-282 |
| Cow position: | chr16:37454696-37454895 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 68, 11 |
| Conread position: | 105-300 |
| Cow position: | chr16:12244275-12244470 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 150 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 41, 83 |
Show alignments to all cow chromosomes.