Cow genome map
| Conread name: | LyN1-MLN01F070009 |
| Conread position: | 1-145 |
| Cow position: | chr2:42939037-42939192 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 121 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 1-145 |
| Cow position: | chr2:44006385-44006242 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 115 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 1-180 |
| Cow position: | chr2:76341316-76341503 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 1-186 |
| Cow position: | chr2:23492885-23492690 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 31, 187 |
| Conread position: | 1-217 |
| Cow position: | chr2:14349116-14348886 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 174 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 82, 198 |
| Conread position: | 1-219 |
| Cow position: | chr2:16304648-16304419 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 173 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 73, 167 |
| Conread position: | 1-234 |
| Cow position: | chr2:18243118-18242883 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 180 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 147, 15 |
| Conread position: | 1-245 |
| Cow position: | chr2:16308733-16308486 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 178 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 83, 17 |
| Conread position: | 1-256 |
| Cow position: | chr2:9370729-9370996 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 208 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 17 |
| Conread position: | 1-256 |
| Cow position: | chr2:27358164-27357912 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 192 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 88, 51 |
| Conread position: | 1-265 |
| Cow position: | chr2:16872174-16871915 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 181 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 29, 80 |
| Conread position: | 1-266 |
| Cow position: | chr2:16752787-16753055 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 212 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 15 |
| Conread position: | 1-266 |
| Cow position: | chr2:68191241-68191510 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 218 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 192 |
| Conread position: | 1-267 |
| Cow position: | chr2:4180006-4180280 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 211 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 191 |
| Conread position: | 1-267 |
| Cow position: | chr2:41045756-41046026 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 206 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 94, 191 |
| Conread position: | 1-272 |
| Cow position: | chr2:76985373-76985650 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 198 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 55, 37 |
| Conread position: | 1-281 |
| Cow position: | chr2:7906045-7905768 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 218 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 35 |
| Conread position: | 1-281 |
| Cow position: | chr2:80840060-80840348 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 220 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 88, 191 |
| Conread position: | 1-286 |
| Cow position: | chr2:45936635-45936910 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 225 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 147, 45 |
| Conread position: | 1-286 |
| Cow position: | chr2:62683777-62683484 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 223 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 56 |
| Conread position: | 1-295 |
| Cow position: | chr2:871138-871440 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 209 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 87, 184 |
| Conread position: | 1-296 |
| Cow position: | chr2:383012-383316 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 88, 16 |
| Conread position: | 1-296 |
| Cow position: | chr2:11899499-11899198 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 82, 209 |
| Conread position: | 1-296 |
| Cow position: | chr2:30909606-30909308 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 82, 61 |
| Conread position: | 1-296 |
| Cow position: | chr2:38659426-38659718 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 230 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 177 |
| Conread position: | 1-296 |
| Cow position: | chr2:54716549-54716246 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 225 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 80, 196 |
| Conread position: | 1-296 |
| Cow position: | chr2:72963250-72963544 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 88, 74 |
| Conread position: | 1-300 |
| Cow position: | chr2:25930300-25930606 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 220 |
| Conread position: | 1-303 |
| Cow position: | chr2:17940934-17941250 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 88, 74 |
| Conread position: | 1-311 |
| Cow position: | chr2:1657404-1657093 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 190 |
| Conread position: | 1-311 |
| Cow position: | chr2:77281289-77280972 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 231 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 88, 191 |
| Conread position: | 1-311 |
| Cow position: | chr2:78749888-78749575 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 229 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 145, 169 |
| Conread position: | 1-317 |
| Cow position: | chr2:32659541-32659230 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 230 |
| Alignm E-value: | 5.99994e-41 |
| Alignm gaps (pig, cow): | 54, 30 |
| Conread position: | 1-322 |
| Cow position: | chr2:37008766-37008446 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 149, 64 |
| Conread position: | 2-187 |
| Cow position: | chr2:44987040-44987232 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 2-260 |
| Cow position: | chr2:53485728-53485988 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 205 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 144, 182 |
| Conread position: | 2-266 |
| Cow position: | chr2:85739476-85739201 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 206 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 65, 197 |
| Conread position: | 2-336 |
| Cow position: | chr2:5797694-5798037 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 86, 191 |
| Conread position: | 2-336 |
| Cow position: | chr2:11686088-11685763 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 235 |
| Alignm E-value: | 5.99994e-41 |
| Alignm gaps (pig, cow): | 289, 83 |
| Conread position: | 3-141 |
| Cow position: | chr2:13579258-13579116 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 107 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 86, 0 |
| Conread position: | 3-172 |
| Cow position: | chr2:15812041-15811860 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 139 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 3-190 |
| Cow position: | chr2:33263269-33263465 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 75, 183 |
| Conread position: | 3-266 |
| Cow position: | chr2:36047212-36047476 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 205 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 82, 192 |
| Conread position: | 7-256 |
| Cow position: | chr2:15059898-15060134 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 193 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 194, 62 |
| Conread position: | 13-301 |
| Cow position: | chr2:12331024-12330731 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 219 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 76, 181 |
| Conread position: | 16-318 |
| Cow position: | chr2:41157278-41156964 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 229 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 51, 179 |
| Conread position: | 17-256 |
| Cow position: | chr2:39661733-39661971 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 195 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 5, 64 |
| Conread position: | 43-322 |
| Cow position: | chr2:19961384-19961100 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 214 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 40, 5 |
| Conread position: | 60-256 |
| Cow position: | chr2:38271307-38271505 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 18, 145 |
| Conread position: | 70-271 |
| Cow position: | chr2:36135939-36135733 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 153 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 18, 129 |
| Conread position: | 82-336 |
| Cow position: | chr2:21407497-21407240 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 191 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 61, 16 |
| Conread position: | 94-280 |
| Cow position: | chr2:86349302-86349111 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 152 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 53, 94 |
Show alignments to all cow chromosomes.