Cow genome map
| Conread name: | LyN1-MLN01F070009 |
| Conread position: | 1-150 |
| Cow position: | chr3:78200786-78200940 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 129 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 88, 23 |
| Conread position: | 1-172 |
| Cow position: | chr3:38346527-38346350 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 13, 62 |
| Conread position: | 1-186 |
| Cow position: | chr3:43528910-43529103 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 150 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 1-190 |
| Cow position: | chr3:13085051-13085246 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 1-210 |
| Cow position: | chr3:75157868-75158074 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 146, 35 |
| Conread position: | 1-249 |
| Cow position: | chr3:1831382-1831621 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 189 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 146, 79 |
| Conread position: | 1-249 |
| Cow position: | chr3:60891755-60891493 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 205 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 95, 0 |
| Conread position: | 1-260 |
| Cow position: | chr3:14647874-14647611 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 182 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 41, 55 |
| Conread position: | 1-263 |
| Cow position: | chr3:16005306-16005584 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 204 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 31, 267 |
| Conread position: | 1-266 |
| Cow position: | chr3:173989-173721 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 212 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 146, 79 |
| Conread position: | 1-268 |
| Cow position: | chr3:2903964-2904237 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 210 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 77, 193 |
| Conread position: | 1-270 |
| Cow position: | chr3:12668187-12667911 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 210 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 143, 94 |
| Conread position: | 1-281 |
| Cow position: | chr3:16157008-16156727 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 215 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 55 |
| Conread position: | 1-295 |
| Cow position: | chr3:10371862-10371564 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 95, 169 |
| Conread position: | 1-295 |
| Cow position: | chr3:18886949-18886648 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 88, 191 |
| Conread position: | 1-296 |
| Cow position: | chr3:52257025-52257326 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 215 |
| Conread position: | 1-297 |
| Cow position: | chr3:44536484-44536800 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 224 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 88, 35 |
| Conread position: | 1-300 |
| Cow position: | chr3:23216840-23217141 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 230 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 194 |
| Conread position: | 1-300 |
| Cow position: | chr3:73416494-73416182 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 230 |
| Alignm E-value: | 6.99949e-42 |
| Alignm gaps (pig, cow): | 39, 51 |
| Conread position: | 1-300 |
| Cow position: | chr3:84199261-84198967 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 230 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 88, 45 |
| Conread position: | 1-302 |
| Cow position: | chr3:19109054-19108742 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 224 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 73, 170 |
| Conread position: | 1-311 |
| Cow position: | chr3:45881225-45880917 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 145, 179 |
| Conread position: | 1-311 |
| Cow position: | chr3:46506260-46505942 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 88, 191 |
| Conread position: | 1-317 |
| Cow position: | chr3:19717780-19718100 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 71 |
| Conread position: | 1-336 |
| Cow position: | chr3:37600219-37599884 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 28 |
| Conread position: | 1-336 |
| Cow position: | chr3:45184509-45184837 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 243 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 153, 66 |
| Conread position: | 2-237 |
| Cow position: | chr3:77366221-77366459 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 191 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 87, 29 |
| Conread position: | 2-255 |
| Cow position: | chr3:17460706-17460447 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 204 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 60 |
| Conread position: | 2-266 |
| Cow position: | chr3:3031721-3031451 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 212 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 189 |
| Conread position: | 2-266 |
| Cow position: | chr3:16293426-16293698 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 210 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 82, 35 |
| Conread position: | 2-311 |
| Cow position: | chr3:61678023-61677709 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 188 |
| Conread position: | 3-293 |
| Cow position: | chr3:67745280-67745589 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 212 |
| Conread position: | 3-300 |
| Cow position: | chr3:33254373-33254677 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 79, 110 |
| Conread position: | 5-249 |
| Cow position: | chr3:77427160-77426915 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 182 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 83, 180 |
| Conread position: | 6-250 |
| Cow position: | chr3:11018928-11018687 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 192 |
| Alignm E-value: | 6.99949e-42 |
| Alignm gaps (pig, cow): | 83, 10 |
| Conread position: | 6-297 |
| Cow position: | chr3:3884703-3885011 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 14-263 |
| Cow position: | chr3:80477618-80477859 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 181 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 75, 22 |
| Conread position: | 14-266 |
| Cow position: | chr3:35884639-35884902 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 200 |
| Alignm E-value: | 5.99994e-41 |
| Alignm gaps (pig, cow): | 64, 23 |
| Conread position: | 14-271 |
| Cow position: | chr3:18253021-18252761 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 206 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 178 |
| Conread position: | 16-300 |
| Cow position: | chr3:77226188-77225918 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 211 |
| Alignm E-value: | 7.9874e-44 |
| Alignm gaps (pig, cow): | 185, 64 |
| Conread position: | 22-266 |
| Cow position: | chr3:71246073-71245813 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 196 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 53, 6 |
| Conread position: | 28-266 |
| Cow position: | chr3:19794632-19794873 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 194 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 120, 67 |
| Conread position: | 29-311 |
| Cow position: | chr3:64281861-64282142 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 220 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 119, 171 |
| Conread position: | 76-301 |
| Cow position: | chr3:15082531-15082755 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 183 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 30, 114 |
| Conread position: | 81-267 |
| Cow position: | chr3:29582515-29582324 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 143 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 67, 14 |
| Conread position: | 82-317 |
| Cow position: | chr3:34464770-34464534 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 173 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 65, 105 |
| Conread position: | 107-336 |
| Cow position: | chr3:48240633-48240399 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 164 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 94, 63 |
Show alignments to all cow chromosomes.