Cow genome map
| Conread name: | LyN1-MLN01F070009 |
| Conread position: | 1-147 |
| Cow position: | chr5:37758444-37758593 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 116 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 1-172 |
| Cow position: | chr5:57986892-57986713 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 140 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 1-227 |
| Cow position: | chr5:41980782-41980553 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 179 |
| Alignm E-value: | 7.00649e-43 |
| Alignm gaps (pig, cow): | 147, 74 |
| Conread position: | 1-243 |
| Cow position: | chr5:25496013-25496262 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 196 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 190 |
| Conread position: | 1-257 |
| Cow position: | chr5:14904689-14904947 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 191 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 81, 47 |
| Conread position: | 1-265 |
| Cow position: | chr5:6576193-6576466 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 203 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 88, 192 |
| Conread position: | 1-266 |
| Cow position: | chr5:7140698-7140972 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 214 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 204 |
| Conread position: | 1-300 |
| Cow position: | chr5:34192317-34192012 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 224 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 25, 15 |
| Conread position: | 1-301 |
| Cow position: | chr5:69753229-69753537 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 201 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 49, 302 |
| Conread position: | 1-310 |
| Cow position: | chr5:62377754-62377446 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 82, 42 |
| Conread position: | 1-311 |
| Cow position: | chr5:19969650-19969953 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 228 |
| Alignm E-value: | 7.00649e-44 |
| Alignm gaps (pig, cow): | 90, 67 |
| Conread position: | 1-311 |
| Cow position: | chr5:35207633-35207321 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 146, 92 |
| Conread position: | 1-311 |
| Cow position: | chr5:43991673-43991361 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 147, 80 |
| Conread position: | 1-311 |
| Cow position: | chr5:53835065-53834731 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 207 |
| Conread position: | 1-311 |
| Cow position: | chr5:72046277-72046584 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 146, 15 |
| Conread position: | 1-317 |
| Cow position: | chr5:14551203-14551529 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 296 |
| Conread position: | 2-146 |
| Cow position: | chr5:30276081-30275932 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 2-257 |
| Cow position: | chr5:68593816-68593556 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 205 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 173 |
| Conread position: | 2-296 |
| Cow position: | chr5:15722918-15723222 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 52 |
| Conread position: | 3-254 |
| Cow position: | chr5:54125461-54125200 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 198 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 93, 28 |
| Conread position: | 3-263 |
| Cow position: | chr5:39936493-39936227 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 208 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 93, 194 |
| Conread position: | 3-265 |
| Cow position: | chr5:34527949-34527692 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 204 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 145, 26 |
| Conread position: | 4-214 |
| Cow position: | chr5:65593288-65593072 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 158 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 5-152 |
| Cow position: | chr5:53855097-53854945 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 76, 148 |
| Conread position: | 13-271 |
| Cow position: | chr5:58461311-58461574 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 201 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 176 |
| Conread position: | 21-300 |
| Cow position: | chr5:64844890-64845177 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 221 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 36 |
| Conread position: | 28-249 |
| Cow position: | chr5:14313630-14313411 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 164 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 119, 28 |
| Conread position: | 36-266 |
| Cow position: | chr5:7042603-7042366 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 187 |
| Alignm E-value: | 7.00649e-44 |
| Alignm gaps (pig, cow): | 53, 156 |
| Conread position: | 48-256 |
| Cow position: | chr5:58353556-58353341 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 167 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 30, 144 |
| Conread position: | 70-266 |
| Cow position: | chr5:47871780-47871984 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 156 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 26, 122 |
| Conread position: | 83-266 |
| Cow position: | chr5:37384224-37384411 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 145 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 67, 113 |
Show alignments to all cow chromosomes.