Cow genome map
| Conread name: | LyN1-MLN01F070009 |
| Conread position: | 1-150 |
| Cow position: | chr6:1175396-1175543 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 89, 100 |
| Conread position: | 1-164 |
| Cow position: | chr6:46570514-46570340 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 135 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 1-209 |
| Cow position: | chr6:18969655-18969857 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 158 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 140, 61 |
| Conread position: | 1-221 |
| Cow position: | chr6:67213910-67213684 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 168 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 88, 74 |
| Conread position: | 1-240 |
| Cow position: | chr6:32269723-32269960 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 179 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 147, 14 |
| Conread position: | 1-256 |
| Cow position: | chr6:39093151-39092890 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 203 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 88, 198 |
| Conread position: | 1-260 |
| Cow position: | chr6:55170009-55169753 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 201 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 88, 183 |
| Conread position: | 1-266 |
| Cow position: | chr6:6471383-6471672 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 211 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 62, 208 |
| Conread position: | 1-267 |
| Cow position: | chr6:31941403-31941129 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 214 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 92 |
| Conread position: | 1-268 |
| Cow position: | chr6:5096279-5096550 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 208 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 146, 62 |
| Conread position: | 1-268 |
| Cow position: | chr6:10681519-10681245 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 213 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 68 |
| Conread position: | 1-270 |
| Cow position: | chr6:51877291-51877013 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 222 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 85, 193 |
| Conread position: | 1-275 |
| Cow position: | chr6:29084854-29085124 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 193 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 145, 76 |
| Conread position: | 1-282 |
| Cow position: | chr6:57473789-57473508 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 204 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 145, 30 |
| Conread position: | 1-297 |
| Cow position: | chr6:51674302-51674004 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 85, 191 |
| Conread position: | 1-311 |
| Cow position: | chr6:11193045-11193369 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 88, 243 |
| Conread position: | 1-317 |
| Cow position: | chr6:39137027-39136715 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 233 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 153, 35 |
| Conread position: | 1-336 |
| Cow position: | chr6:21588518-21588176 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 82, 35 |
| Conread position: | 2-267 |
| Cow position: | chr6:34075404-34075129 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 208 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 2-303 |
| Cow position: | chr6:16703224-16703512 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 221 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 7, 75 |
| Conread position: | 3-317 |
| Cow position: | chr6:17149644-17149956 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 185, 59 |
| Conread position: | 5-311 |
| Cow position: | chr6:38439142-38438824 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 50 |
| Conread position: | 18-152 |
| Cow position: | chr6:11169092-11168956 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 108 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 44-266 |
| Cow position: | chr6:59603339-59603562 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 165 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 104, 30 |
| Conread position: | 48-273 |
| Cow position: | chr6:4903512-4903746 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 174 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 41, 144 |
| Conread position: | 69-271 |
| Cow position: | chr6:47171526-47171321 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 148 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 77, 128 |
| Conread position: | 70-296 |
| Cow position: | chr6:47149504-47149737 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 170 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 73, 123 |
| Conread position: | 94-311 |
| Cow position: | chr6:17556234-17556454 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 162 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 53, 102 |
| Conread position: | 99-295 |
| Cow position: | chr6:1109442-1109242 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 152 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 48, 89 |
| Conread position: | 106-293 |
| Cow position: | chr6:7112511-7112711 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 44, 0 |
Show alignments to all cow chromosomes.