Cow genome map
| Conread name: | LyN1-MLN01F070009 |
| Conread position: | 1-145 |
| Cow position: | chr7:30275903-30275757 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 1-145 |
| Cow position: | chr7:60550700-60550848 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 1-171 |
| Cow position: | chr7:62953217-62953048 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 139 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 37, 99 |
| Conread position: | 1-187 |
| Cow position: | chr7:29509369-29509177 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 153 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 95, 68 |
| Conread position: | 1-198 |
| Cow position: | chr7:50297234-50297445 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 88, 198 |
| Conread position: | 1-217 |
| Cow position: | chr7:35061378-35061160 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 180 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 88, 196 |
| Conread position: | 1-255 |
| Cow position: | chr7:33804142-33803873 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 201 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 65, 197 |
| Conread position: | 1-260 |
| Cow position: | chr7:57517263-57516995 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 193 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 79, 32 |
| Conread position: | 1-267 |
| Cow position: | chr7:53037650-53037925 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 208 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 1-270 |
| Cow position: | chr7:31878096-31877820 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 217 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 42 |
| Conread position: | 1-271 |
| Cow position: | chr7:67816268-67815997 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 204 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 88, 28 |
| Conread position: | 1-276 |
| Cow position: | chr7:40120837-40120556 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 208 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 88, 36 |
| Conread position: | 1-281 |
| Cow position: | chr7:45171159-45170872 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 224 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 88, 191 |
| Conread position: | 1-281 |
| Cow position: | chr7:57910994-57910705 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 220 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 192 |
| Conread position: | 1-295 |
| Cow position: | chr7:34412896-34413206 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 229 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 1-295 |
| Cow position: | chr7:52383593-52383887 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 214 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 144, 84 |
| Conread position: | 1-295 |
| Cow position: | chr7:67872383-67872088 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 217 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 153, 180 |
| Conread position: | 1-300 |
| Cow position: | chr7:50950-51262 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 232 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 88, 35 |
| Conread position: | 1-300 |
| Cow position: | chr7:19096674-19096975 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 81 |
| Conread position: | 1-300 |
| Cow position: | chr7:33068910-33069187 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 225 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 147, 71 |
| Conread position: | 1-300 |
| Cow position: | chr7:43110136-43110446 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 82, 198 |
| Conread position: | 1-300 |
| Cow position: | chr7:59558765-59559058 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 214 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 22, 64 |
| Conread position: | 1-311 |
| Cow position: | chr7:23457387-23457704 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 88, 36 |
| Conread position: | 1-311 |
| Cow position: | chr7:64405936-64405619 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 136 |
| Conread position: | 1-312 |
| Cow position: | chr7:19466871-19467188 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 190 |
| Conread position: | 1-317 |
| Cow position: | chr7:18871382-18871705 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 77, 11 |
| Conread position: | 1-317 |
| Cow position: | chr7:26196404-26196728 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 233 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 147, 94 |
| Conread position: | 1-323 |
| Cow position: | chr7:12659604-12659919 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 146, 28 |
| Conread position: | 1-323 |
| Cow position: | chr7:18499375-18499700 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 234 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 80, 35 |
| Conread position: | 1-336 |
| Cow position: | chr7:39094897-39095229 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 251 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 77, 52 |
| Conread position: | 2-152 |
| Cow position: | chr7:34568548-34568398 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 116 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 70, 26 |
| Conread position: | 2-219 |
| Cow position: | chr7:29280599-29280819 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 173 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 76, 94 |
| Conread position: | 2-266 |
| Cow position: | chr7:54785197-54785457 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 209 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 62, 25 |
| Conread position: | 2-271 |
| Cow position: | chr7:65819097-65819369 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 197 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 25, 103 |
| Conread position: | 2-272 |
| Cow position: | chr7:27569757-27570033 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 191 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 80, 34 |
| Conread position: | 2-276 |
| Cow position: | chr7:63771303-63771021 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 221 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 168 |
| Conread position: | 2-296 |
| Cow position: | chr7:34083060-34082754 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 192 |
| Conread position: | 2-300 |
| Cow position: | chr7:19398569-19398875 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 226 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 94, 193 |
| Conread position: | 2-305 |
| Cow position: | chr7:44590455-44590755 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 229 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 158 |
| Conread position: | 2-311 |
| Cow position: | chr7:42593921-42594233 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 191 |
| Conread position: | 2-317 |
| Cow position: | chr7:60757595-60757911 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 145, 79 |
| Conread position: | 3-277 |
| Cow position: | chr7:68928916-68928636 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 208 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 81, 47 |
| Conread position: | 3-297 |
| Cow position: | chr7:69065881-69065584 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 221 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 147, 92 |
| Conread position: | 5-243 |
| Cow position: | chr7:30115333-30115578 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 189 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 85, 186 |
| Conread position: | 6-192 |
| Cow position: | chr7:41745725-41745917 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 53, 10 |
| Conread position: | 8-183 |
| Cow position: | chr7:25194913-25194744 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 139, 28 |
| Conread position: | 14-300 |
| Cow position: | chr7:44621785-44622087 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 219 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 26, 186 |
| Conread position: | 21-336 |
| Cow position: | chr7:19798853-19799180 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 173 |
| Conread position: | 24-256 |
| Cow position: | chr7:42224181-42224413 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 121, 22 |
| Conread position: | 28-268 |
| Cow position: | chr7:49826774-49827013 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 170 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 119, 9 |
| Conread position: | 37-220 |
| Cow position: | chr7:7175347-7175161 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 52, 12 |
| Conread position: | 40-186 |
| Cow position: | chr7:39131878-39132031 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 49-336 |
| Cow position: | chr7:51675509-51675218 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 205 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 30, 141 |
| Conread position: | 63-303 |
| Cow position: | chr7:56822156-56822404 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 180 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 20, 129 |
| Conread position: | 69-255 |
| Cow position: | chr7:1721611-1721806 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 37, 124 |
| Conread position: | 69-270 |
| Cow position: | chr7:48638247-48638047 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 30, 116 |
| Conread position: | 87-301 |
| Cow position: | chr7:39419598-39419815 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 59, 100 |
| Conread position: | 105-336 |
| Cow position: | chr7:32713102-32713336 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 167 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 42, 83 |
Show alignments to all cow chromosomes.