Cow genome map
| Conread name: | LyN1-MLN01F070009 |
| Conread position: | 1-186 |
| Cow position: | chr9:9415663-9415473 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 24, 102 |
| Conread position: | 1-187 |
| Cow position: | chr9:29184455-29184262 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 154 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 88, 167 |
| Conread position: | 1-193 |
| Cow position: | chr9:18381539-18381744 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 1-204 |
| Cow position: | chr9:9752210-9752004 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 166 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 70, 177 |
| Conread position: | 1-206 |
| Cow position: | chr9:13186047-13185843 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 111, 61 |
| Conread position: | 1-229 |
| Cow position: | chr9:10634380-10634143 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 188 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 85, 193 |
| Conread position: | 1-249 |
| Cow position: | chr9:9442915-9442659 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 193 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 88, 191 |
| Conread position: | 1-256 |
| Cow position: | chr9:9491485-9491749 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 201 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 88, 14 |
| Conread position: | 1-256 |
| Cow position: | chr9:13472120-13472373 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 197 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 147, 76 |
| Conread position: | 1-267 |
| Cow position: | chr9:64054904-64054637 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 208 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 92 |
| Conread position: | 1-268 |
| Cow position: | chr9:51556430-51556157 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 207 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 178 |
| Conread position: | 1-270 |
| Cow position: | chr9:33999697-33999419 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 220 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 30 |
| Conread position: | 1-281 |
| Cow position: | chr9:34918074-34917796 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 222 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 200, 181 |
| Conread position: | 1-283 |
| Cow position: | chr9:47263501-47263214 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 200 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 88, 57 |
| Conread position: | 1-283 |
| Cow position: | chr9:62669088-62669378 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 213 |
| Alignm E-value: | 7.00649e-45 |
| Alignm gaps (pig, cow): | 89, 192 |
| Conread position: | 1-301 |
| Cow position: | chr9:49981962-49981660 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 192 |
| Conread position: | 1-311 |
| Cow position: | chr9:18008064-18007744 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 192 |
| Conread position: | 1-311 |
| Cow position: | chr9:21841112-21841417 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 233 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 66, 169 |
| Conread position: | 1-311 |
| Cow position: | chr9:29338370-29338053 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 189 |
| Conread position: | 1-317 |
| Cow position: | chr9:13181374-13181057 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 235 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 71, 187 |
| Conread position: | 2-231 |
| Cow position: | chr9:31078380-31078139 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 177 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 60, 66 |
| Conread position: | 2-241 |
| Cow position: | chr9:20959260-20959012 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 181 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 88, 34 |
| Conread position: | 2-266 |
| Cow position: | chr9:43670306-43670046 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 201 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 141, 34 |
| Conread position: | 2-283 |
| Cow position: | chr9:28821987-28822271 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 220 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 194 |
| Conread position: | 2-300 |
| Cow position: | chr9:52001638-52001952 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 229 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 196 |
| Conread position: | 4-254 |
| Cow position: | chr9:1850199-1850448 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 191 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 146, 7 |
| Conread position: | 16-296 |
| Cow position: | chr9:55796645-55796943 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 229 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 11 |
| Conread position: | 20-203 |
| Cow position: | chr9:5524912-5525114 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 28-300 |
| Cow position: | chr9:20409801-20409526 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 214 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 119, 159 |
| Conread position: | 29-300 |
| Cow position: | chr9:13220979-13220694 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 205 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 56, 167 |
| Conread position: | 68-240 |
| Cow position: | chr9:28356027-28356205 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 23, 123 |
| Conread position: | 68-311 |
| Cow position: | chr9:17870899-17870641 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 185 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 25, 132 |
| Conread position: | 69-311 |
| Cow position: | chr9:54997266-54997020 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 184 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 77, 119 |
| Conread position: | 73-271 |
| Cow position: | chr9:52407934-52408137 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 15, 116 |
| Conread position: | 84-317 |
| Cow position: | chr9:25974612-25974843 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 173 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 66, 94 |
| Conread position: | 86-256 |
| Cow position: | chr9:1856472-1856647 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 130 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 64, 110 |
| Conread position: | 89-246 |
| Cow position: | chr9:17987390-17987551 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 123 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 58, 87 |
Show alignments to all cow chromosomes.