Cow genome map
| Conread name: | LyN1-MLN01G010084 |
| Conread position: | 1-183 |
| Cow position: | chr10:19330737-19330916 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 142 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 1-425 |
| Cow position: | chr10:2736166-2736596 (view UCSC Genome Browser custom track) |
| Alignm length: | 435 |
| Alignm identity: | 310 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 189, 8 |
| Conread position: | 1-426 |
| Cow position: | chr10:39037900-39037470 (view UCSC Genome Browser custom track) |
| Alignm length: | 435 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 190, 8 |
| Conread position: | 9-424 |
| Cow position: | chr10:32365095-32365519 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 308 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 182, 353 |
| Conread position: | 11-425 |
| Cow position: | chr10:64347128-64347541 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 180, 199 |
| Conread position: | 17-181 |
| Cow position: | chr10:58687346-58687510 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 122 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 17-247 |
| Cow position: | chr10:42460769-42460533 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 178 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 17-285 |
| Cow position: | chr10:46241199-46241477 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 195 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 168, 0 |
| Conread position: | 17-321 |
| Cow position: | chr10:16929327-16929640 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 174, 0 |
| Conread position: | 17-330 |
| Cow position: | chr10:45768930-45769247 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 231 |
| Alignm E-value: | 7.00649e-45 |
| Alignm gaps (pig, cow): | 67, 98 |
| Conread position: | 17-358 |
| Cow position: | chr10:5857986-5858335 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 174, 345 |
| Conread position: | 17-372 |
| Cow position: | chr10:50199144-50199502 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 275 |
| Conread position: | 17-385 |
| Cow position: | chr10:30689162-30689540 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 174, 347 |
| Conread position: | 17-385 |
| Cow position: | chr10:46173027-46172674 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 174, 113 |
| Conread position: | 17-414 |
| Cow position: | chr10:38154312-38154718 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 316 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 85, 355 |
| Conread position: | 17-421 |
| Cow position: | chr10:27120745-27120337 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 177, 94 |
| Conread position: | 17-423 |
| Cow position: | chr10:30719859-30720275 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 174, 0 |
| Conread position: | 17-425 |
| Cow position: | chr10:278192-277777 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 174, 7 |
| Conread position: | 17-425 |
| Cow position: | chr10:2516201-2516614 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 299 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 168, 45 |
| Conread position: | 17-425 |
| Cow position: | chr10:23412210-23412627 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 174, 0 |
| Conread position: | 17-425 |
| Cow position: | chr10:23913689-23913275 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 298 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 174, 51 |
| Conread position: | 17-425 |
| Cow position: | chr10:26539745-26539330 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 294 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 174, 51 |
| Conread position: | 17-425 |
| Cow position: | chr10:26765712-26766127 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 174, 112 |
| Conread position: | 17-425 |
| Cow position: | chr10:31733845-31734264 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 11 |
| Conread position: | 17-425 |
| Cow position: | chr10:32703926-32704343 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 308 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 174, 0 |
| Conread position: | 17-425 |
| Cow position: | chr10:37773043-37773460 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 174, 0 |
| Conread position: | 17-425 |
| Cow position: | chr10:38941283-38941700 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 174, 32 |
| Conread position: | 17-425 |
| Cow position: | chr10:39811347-39810930 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 298 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 174, 0 |
| Conread position: | 17-425 |
| Cow position: | chr10:47909781-47910196 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 174, 76 |
| Conread position: | 18-414 |
| Cow position: | chr10:15888147-15888545 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 284 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 173, 190 |
| Conread position: | 19-183 |
| Cow position: | chr10:49430826-49430988 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 19-383 |
| Cow position: | chr10:60028891-60029262 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 198, 54 |
| Conread position: | 19-405 |
| Cow position: | chr10:10047374-10046980 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 285 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 175, 240 |
| Conread position: | 19-424 |
| Cow position: | chr10:31375247-31374838 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 310 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 172, 52 |
| Conread position: | 19-424 |
| Cow position: | chr10:32282180-32282594 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 303 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 172, 0 |
| Conread position: | 19-425 |
| Cow position: | chr10:55098778-55098374 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 174, 191 |
| Conread position: | 20-410 |
| Cow position: | chr10:18886081-18885682 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 283 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 170, 252 |
| Conread position: | 41-425 |
| Cow position: | chr10:11406471-11406850 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 171, 72 |
| Conread position: | 53-426 |
| Cow position: | chr10:37530613-37530243 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 74 |
| Conread position: | 65-421 |
| Cow position: | chr10:38782684-38782326 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 233 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 140, 34 |
| Conread position: | 67-424 |
| Cow position: | chr10:76312-76665 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 135, 225 |
| Conread position: | 102-421 |
| Cow position: | chr10:60959860-60960191 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 188 |
| Conread position: | 106-426 |
| Cow position: | chr10:62405542-62405214 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 117-414 |
| Cow position: | chr10:24730-25035 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 222 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 74, 196 |
| Conread position: | 119-424 |
| Cow position: | chr10:60354404-60354716 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 226 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 227 |
| Conread position: | 245-425 |
| Cow position: | chr10:39299292-39299470 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 531-802 |
| Cow position: | chr10:20388266-20388000 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 190 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 43, 19 |
| Conread position: | 532-813 |
| Cow position: | chr10:50038571-50038855 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 211 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 47, 119 |
| Conread position: | 534-808 |
| Cow position: | chr10:9287311-9287593 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 203 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 40, 237 |
| Conread position: | 536-813 |
| Cow position: | chr10:23935297-23935568 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 205 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 76, 15 |
| Conread position: | 541-813 |
| Cow position: | chr10:41636900-41637172 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 199 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 71, 10 |
| Conread position: | 552-809 |
| Cow position: | chr10:31542588-31542846 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 179 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 58, 182 |
Show alignments to all cow chromosomes.