Cow genome map
| Conread name: | LyN1-MLN01G010084 |
| Conread position: | 1-425 |
| Cow position: | chr15:2899520-2899090 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 190, 8 |
| Conread position: | 2-425 |
| Cow position: | chr15:36940646-36940215 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 299 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 197, 0 |
| Conread position: | 11-414 |
| Cow position: | chr15:13076264-13076678 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 17-183 |
| Cow position: | chr15:23797879-23798049 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 127 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 17-215 |
| Cow position: | chr15:8696878-8696689 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 181, 7 |
| Conread position: | 17-258 |
| Cow position: | chr15:42943855-42943611 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 178 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 180, 0 |
| Conread position: | 17-306 |
| Cow position: | chr15:29899089-29899380 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 220 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 104 |
| Conread position: | 17-307 |
| Cow position: | chr15:31585647-31585348 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 217 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 174, 0 |
| Conread position: | 17-330 |
| Cow position: | chr15:3792828-3793159 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 235 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 17-330 |
| Cow position: | chr15:6658365-6658040 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 231 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 17-343 |
| Cow position: | chr15:15262930-15262613 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 230 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 199, 70 |
| Conread position: | 17-348 |
| Cow position: | chr15:32491137-32490799 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 175, 117 |
| Conread position: | 17-372 |
| Cow position: | chr15:37394480-37394830 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 259 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 100, 39 |
| Conread position: | 17-395 |
| Cow position: | chr15:39091443-39091070 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 177, 45 |
| Conread position: | 17-399 |
| Cow position: | chr15:44224-44609 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 272 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 166, 80 |
| Conread position: | 17-399 |
| Cow position: | chr15:4629486-4629104 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 274 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 180, 34 |
| Conread position: | 17-404 |
| Cow position: | chr15:35416347-35416734 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 103, 51 |
| Conread position: | 17-423 |
| Cow position: | chr15:7565754-7566167 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 174, 345 |
| Conread position: | 17-425 |
| Cow position: | chr15:1785517-1785934 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 174, 0 |
| Conread position: | 17-425 |
| Cow position: | chr15:2080082-2080498 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 174, 342 |
| Conread position: | 17-425 |
| Cow position: | chr15:2644595-2644180 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 174, 273 |
| Conread position: | 17-425 |
| Cow position: | chr15:3721381-3720972 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 173, 32 |
| Conread position: | 17-425 |
| Cow position: | chr15:18265010-18264593 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 175, 81 |
| Conread position: | 17-425 |
| Cow position: | chr15:26591595-26591182 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 174, 400 |
| Conread position: | 17-425 |
| Cow position: | chr15:36329709-36329292 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 299 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 174, 0 |
| Conread position: | 17-425 |
| Cow position: | chr15:36670927-36671325 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 200, 114 |
| Conread position: | 17-426 |
| Cow position: | chr15:60383-60786 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 283 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 180, 117 |
| Conread position: | 17-458 |
| Cow position: | chr15:23774054-23774493 (view UCSC Genome Browser custom track) |
| Alignm length: | 445 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 183, 236 |
| Conread position: | 17-499 |
| Cow position: | chr15:6281403-6281885 (view UCSC Genome Browser custom track) |
| Alignm length: | 496 |
| Alignm identity: | 361 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 173, 71 |
| Conread position: | 19-281 |
| Cow position: | chr15:7547622-7547891 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 200 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 178, 25 |
| Conread position: | 19-399 |
| Cow position: | chr15:44364602-44364215 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 0 |
| Conread position: | 32-362 |
| Cow position: | chr15:43266872-43267204 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 234 |
| Conread position: | 32-414 |
| Cow position: | chr15:22712496-22712885 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 284 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 55 |
| Conread position: | 41-226 |
| Cow position: | chr15:6482253-6482444 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 143 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 59, 68 |
| Conread position: | 43-425 |
| Cow position: | chr15:4727941-4728318 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 276 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 148, 247 |
| Conread position: | 49-326 |
| Cow position: | chr15:38937551-38937835 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 204 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 142, 0 |
| Conread position: | 49-415 |
| Cow position: | chr15:336467-336842 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 272 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 107 |
| Conread position: | 50-422 |
| Cow position: | chr15:14756965-14757346 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 102, 226 |
| Conread position: | 64-415 |
| Cow position: | chr15:20348465-20348110 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 276 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 126, 75 |
| Conread position: | 73-425 |
| Cow position: | chr15:20352997-20352638 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 239 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 26, 329 |
| Conread position: | 77-425 |
| Cow position: | chr15:4769315-4769671 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 117, 326 |
| Conread position: | 82-414 |
| Cow position: | chr15:17237057-17236726 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 239 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 112, 36 |
| Conread position: | 82-425 |
| Cow position: | chr15:5197771-5198123 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 109, 231 |
| Conread position: | 91-424 |
| Cow position: | chr15:4712732-4713075 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 0 |
| Conread position: | 93-400 |
| Cow position: | chr15:32876847-32877157 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 209 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 124, 190 |
| Conread position: | 98-376 |
| Cow position: | chr15:37770231-37769946 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 211 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 118, 10 |
| Conread position: | 102-425 |
| Cow position: | chr15:22855720-22855389 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 301 |
| Conread position: | 532-750 |
| Cow position: | chr15:2670158-2669943 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 156 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 80, 62 |
| Conread position: | 534-713 |
| Cow position: | chr15:35739376-35739560 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 40, 17 |
| Conread position: | 534-814 |
| Cow position: | chr15:22138935-22138653 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 204 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 40, 16 |
| Conread position: | 540-809 |
| Cow position: | chr15:1879151-1879414 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 193 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 72, 163 |
| Conread position: | 541-788 |
| Cow position: | chr15:20369685-20369936 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 184 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 541-809 |
| Cow position: | chr15:17399128-17399397 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 191 |
| Alignm E-value: | 9e-39 |
| Alignm gaps (pig, cow): | 71, 13 |
| Conread position: | 548-710 |
| Cow position: | chr15:6044239-6044400 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 119 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 64, 37 |
Show alignments to all cow chromosomes.